Pregenerated sensors for SLC13A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029843Ensembl transcript IDs: ENSMUST00000031868.5
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGAAGAGAGGTCACAGGTCTCATGGTCTGACAGGCAGAGTGCTCTaGCTAGCTCTGATTCCTAGGAAGGTGACACAAAACCTAGTGATG | + |
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Preference number: 1 (lower is better) Translates to: QKRGHRSHGLTGRVL*LALIPRKVTQNLVM Trigger: CATCACTAGGTTTTGTGTCACCTTCCTAGGAATCAGAGCTAGCCAGAGCACTCTGCCTGTCAGACCATGAGACCTGTGACCTCTCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR GCA 90 bp | TGTAAAGAACCCAAGGCACATCTCTCCCCTCAAAGGGCTCGTGGATaGATAGGAAGGACTGGCAACACCTTTGGGTACCACTTAGAACTT | + |
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Preference number: 1 (lower is better) Translates to: CKEPKAHLSPQRARG*IGRTGNTFGYHLEL Trigger: AAGTTCTAAGTGGTACCCAAAGGTGTTGCCAGTCCTTCCTATGCATCCACGAGCCCTTTGAGGGGAGAGATGTGCCTTGGGTTCTTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR CCA 90 bp | GGCCAGCCTCCTTCTGAAGGAGAATATTATTTCTTTTCAGGAATTTaGTGCCGAGGTAGGGGGACCACTGAAGAGAGACAGGTTACCTTT | + |
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Preference number: 1 (lower is better) Translates to: GQPPSEGEYYFFSGI*CRGRGTTEERQVTF Trigger: AAAGGTAACCTGTCTCTCTTCAGTGGTCCCCCTACCTCGGCACCAAATTCCTGAAAAGAAATAATATTCTCCTTCAGAAGGAGGCTGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR CCA 90 bp | GACAGGTTACCTTTTCTAGAGATAGGACAGAAATGCTTGAGAACATaGGTGAGGTTTTCTCCCAGAAGAGAGGTCACAGGTCTCATGGTC | + |
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Preference number: 1 (lower is better) Translates to: DRLPFLEIGQKCLRT*VRFSPRREVTGLMV Trigger: GACCATGAGACCTGTGACCTCTCTTCTGGGAGAAAACCTCACCCATGTTCTCAAGCATTTCTGTCCTATCTCTAGAAAAGGTAACCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR-3UTR CCA 90 bp | GAACCCAAGGCACATCTCTCCCCTCAAAGGGCTCGTGGATGCATAGGAAGGACTAAATGCTTGAGAACATaGGTGAGGTTTTCTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: EPKAHLSPQRARGCIGRTKCLRT*VRFSPR Trigger: TCTGGGAGAAAACCTCACCCATGTTCTCAAGCATTT...AGTCCTTCCTATGCATCCACGAGCCCTTTGAGGGGAGAGATGTGCCTTGGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR-3UTR TCA 90 bp | GAACCCAAGGCACATCTCTCCCCTCAAAGGGCTCGTGGATGCATAGGAAGGACTCTAATAAGACAGGTATaGACCTTTTTCCTCTCACCA | + |
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Preference number: 2 (lower is better) Translates to: EPKAHLSPQRARGCIGRTLIRQV*TFFLSP Trigger: TGGTGAGAGGAAAAAGGTTCATACCTGTCTTATTAG...AGTCCTTCCTATGCATCCACGAGCCCTTTGAGGGGAGAGATGTGCCTTGGGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGACAGGTTACCTTTTCTAGAGATAGGACAGAAATGCTTGAGAACATGGGTGGCCTCCATGTGGGTCTaGGGTTTATGCTTCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RDRLPFLEIGQKCLRTWVASMWV*GLCFWW Trigger: CCACCAGAAGCATAAACCCCAGACCCACATGGAGGC...CACCCATGTTCTCAAGCATTTCTGTCCTATCTCTAGAAAAGGTAACCTGTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR CAA 90 bp | CTGAAGAGAGACAGGTTACCTTTTCTAGAGATAGGACAGAAATGCTaGAGAACATGGGTGAGGTTTTCTCCCAGAAGAGAGGTCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: LKRDRLPFLEIGQKC*RTWVRFSPRREVTG Trigger: ACCTGTGACCTCTCTTCTGGGAGAAAACCTCACCCATGTTCTCAAGCATTTCTGTCCTATCTCTAGAAAAGGTAACCTGTCTCTCTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR-3UTR TCA 90 bp | TATTTCTTTTCAGGAATTTGGTGCCGAGGTAGGGGGACCACTGAAGAGAGACAGAGCTGTAGGCTTTCTTaGGAGTTGGTGGTAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: YFFSGIWCRGRGTTEERQSCRLS*ELVVRK Trigger: TTTTCTTACCACCAACTCTCAAGAAAGCCTACAGCT...CTGTCTCTCTTCAGTGGTCCCCCTACCTCGGCACCAAATTCCTGAAAAGAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR CCA 72 bp | CGGGATCTGGCGGCGGGAATAGCCTCCATGTGGGTCTaGGGTTTATGCTTCTGGTGGTTTTCTCGGCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: RDLAAGIASMWV*GLCFWWFSRPK Trigger: CTTGGGCCGAGAAAACCACCAGAAGCATAAACCCCAGACCCACATGGAGGCTATTCCCGCCGCCAGATCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR CCA 72 bp | GGTTGGCGGGATCTGGCGGCGGGAATAGCCTCCATGTaGGTCTGGGGTTTATGCTTCTGGTGGTTTTCTCGG | + |
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Preference number: 3 (lower is better) Translates to: GWRDLAAGIASM*VWGLCFWWFSR Trigger: CCGAGAAAACCACCAGAAGCATAAACCCCAGACCCACATGGAGGCTATTCCCGCCGCCAGATCCCGCCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR GCA 72 bp | CCCAAGGCACATCTCTCCCCTCAAAGGGCTCGTGGATaGATAGGAAGGACTGGCAACACCTTTGGGTACCAC | + |
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Preference number: 3 (lower is better) Translates to: PKAHLSPQRARG*IGRTGNTFGYH Trigger: GTGGTACCCAAAGGTGTTGCCAGTCCTTCCTATGCATCCACGAGCCCTTTGAGGGGAGAGATGTGCCTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR CCA 72 bp | AGAACCCAAGGCACATCTCTCCCCTCAAAGGGCTCGTaGATGCATAGGAAGGACTGGCAACACCTTTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: RTQGTSLPSKGS*MHRKDWQHLWV Trigger: TACCCAAAGGTGTTGCCAGTCCTTCCTATGCATCCACGAGCCCTTTGAGGGGAGAGATGTGCCTTGGGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR CCA 72 bp | GGTCACAGGTCTCATGGTCTGACAGGCAGAGTGCTCTaGCTAGCTCTGATTCCTAGGAAGGTGACACAAAAC | + |
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Preference number: 3 (lower is better) Translates to: GHRSHGLTGRVL*LALIPRKVTQN Trigger: GTTTTGTGTCACCTTCCTAGGAATCAGAGCTAGCCAGAGCACTCTGCCTGTCAGACCATGAGACCTGTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR-3UTR CAA 90 bp | ACCCAAGGCACATCTCTCCCCTCAAAGGGCTCGTGGATGCATAGGAAGGACTGGCCTCAGGATGGTTGGTaGGTTTGTTTCCATCTCTTT | + |
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Preference number: 3 (lower is better) Translates to: TQGTSLPSKGSWMHRKDWPQDGW*VCFHLF Trigger: AAAGAGATGGAAACAAACCAACCAACCATCCTGAGG...CCAGTCCTTCCTATGCATCCACGAGCCCTTTGAGGGGAGAGATGTGCCTTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR CCA 72 bp | CTCCCCTCAAAGGGCTCGTGGATGCATAGGAAGGACTaGCAACACCTTTGGGTACCACTTAGAACTTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: LPSKGSWMHRKD*QHLWVPLRTWF Trigger: AAACCAAGTTCTAAGTGGTACCCAAAGGTGTTGCCAGTCCTTCCTATGCATCCACGAGCCCTTTGAGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR CCA 72 bp | GTTTCCTCTCAGGGCACCAAGGCTTACAGTGTTTTCTaGTCTTCAAAAAGAGAGAGCTGGACACAGGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: VSSQGTKAYSVF*SSKRESWTQEE Trigger: CTCTTCCTGTGTCCAGCTCTCTCTTTTTGAAGACCAGAAAACACTGTAAGCCTTGGTGCCCTGAGAGGAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR CCA 72 bp | AGGATGGTTGGTTGGTTTGTTTCCATCTCTTTCCTTTaGTGGAATCAGGCCAGCCTCCTTCTGAAGGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: RMVGWFVSISFL*WNQASLLLKEN Trigger: ATTCTCCTTCAGAAGGAGGCTGGCCTGATTCCACCAAAGGAAAGAGATGGAAACAAACCAACCAACCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR CCA 72 bp | CCTTTTCTAGAGATAGGACAGAAATGCTTGAGAACATaGGTGAGGTTTTCTCCCAGAAGAGAGGTCACAGGT | + |
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Preference number: 3 (lower is better) Translates to: PFLEIGQKCLRT*VRFSPRREVTG Trigger: ACCTGTGACCTCTCTTCTGGGAGAAAACCTCACCCATGTTCTCAAGCATTTCTGTCCTATCTCTAGAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR CCA 72 bp | CCTTCTGAAGGAGAATATTATTTCTTTTCAGGAATTTaGTGCCGAGGTAGGGGGACCACTGAAGAGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: PSEGEYYFFSGI*CRGRGTTEERQ Trigger: CTGTCTCTCTTCAGTGGTCCCCCTACCTCGGCACCAAATTCCTGAAAAGAAATAATATTCTCCTTCAGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| 3UTR CCA 72 bp | ATGGTTGGTTGGTTTGTTTCCATCTCTTTCCTTTGGTaGAATCAGGCCAGCCTCCTTCTGAAGGAGAATATT | + |
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Preference number: 3 (lower is better) Translates to: MVGWFVSISFLW*NQASLLLKENI Trigger: AATATTCTCCTTCAGAAGGAGGCTGGCCTGATTCCACCAAAGGAAAGAGATGGAAACAAACCAACCAACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | CCCGGTGGCGGTTGGCGGGATCTGGCGGCGGGAATAGCCTCCATGTGGGTCTGGCTTGGGTCTTGGAGCTaGGGGTTGGGACTCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: PGGGWRDLAAGIASMWVWLGSWS*GLGLLA Trigger: AGCCAGGAGTCCCAACCCCCAGCTCCAAGACCCAAG...CCAGACCCACATGGAGGCTATTCCCGCCGCCAGATCCCGCCAACCGCCACCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | CCCGGTGGCGGTTGGCGGGATCTGGCGGCGGGAATAGCCTCCATGTGGGTCTGGTCAGTTCTTGGGTCTTaGAGCTGGGGGTTGGGACTC | + |
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Preference number: 4 (lower is better) Translates to: PGGGWRDLAAGIASMWVWSVLGS*SWGLGL Trigger: GAGTCCCAACCCCCAGCTCCAAGACCCAAGAACTGA...CCAGACCCACATGGAGGCTATTCCCGCCGCCAGATCCCGCCAACCGCCACCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | CCCGGTGGCGGTTGGCGGGATCTGGCGGCGGGAATAGCCTCCATGTGGGTCTGGATAGCTCCTCCCTCCTaGTCTTCTTCTTCTTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PGGGWRDLAAGIASMWVWIAPPS*SSSSCS Trigger: TGAGCAAGAAGAAGAAGACCAGGAGGGAGGAGCTAT...CCAGACCCACATGGAGGCTATTCCCGCCGCCAGATCCCGCCAACCGCCACCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | TTCTTGAGAGTTGGTGGTAAGAAAAGCAGGCAGGCTGGGAGGGAGACACAGCCACGCTGGTGGGGTAGATaGTGGGCAGAGGCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: FLRVGGKKSRQAGRETQPRWWGR*WAEAAA Trigger: TGCTGCTGCCTCTGCCCACCATCTACCCCACCAGCG...TGGCTGTGTCTCCCTCCCAGCCTGCCTGCTTTTCTTACCACCAACTCTCAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | ACCCAAGGCACATCTCTCCCCTCAAAGGGCTCGTGGATGCATAGGAAGGACTGGTGGGCTCTATCCCTTTaGAGGCTTCCTGGCCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: TQGTSLPSKGSWMHRKDWWALSL*RLPGLF Trigger: GAACAGGCCAGGAAGCCTCCAAAGGGATAGAGCCCA...CCAGTCCTTCCTATGCATCCACGAGCCCTTTGAGGGGAGAGATGTGCCTTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | GGTGAGGTTTTCTCCCAGAAGAGAGGTCACAGGTCTCATGGTCTGACAGGCAGAGGTGCCCGATCCATGTaGAGAGGCCAGAGCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: GEVFSQKRGHRSHGLTGRGARSM*RGQSSC Trigger: GCAAGAGCTCTGGCCTCTCCACATGGATCGGGCACC...TCTGCCTGTCAGACCATGAGACCTGTGACCTCTCTTCTGGGAGAAAACCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR GCA 90 bp | AACATGGGTGAGGTTTTCTCCCAGAAGAGAGGTCACAGGTCTCATGGTCTGACAGCTCAGCCTCCTCAGTaGCGGCTGCCAGCTGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: NMGEVFSQKRGHRSHGLTAQPPQ*RLPAVP Trigger: AGGAACAGCTGGCAGCCGGCACTGAGGAGGCTGAGC...TGTCAGACCATGAGACCTGTGACCTCTCTTCTGGGAGAAAACCTCACCCATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | GGTGAGGTTTTCTCCCAGAAGAGAGGTCACAGGTCTCATGGTCTGACAGGCAGATCACCATGGCGGTGGTaGAGGTGTTGGAGAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: GEVFSQKRGHRSHGLTGRSPWRW*RCWRAT Trigger: TGTGGCTCTCCAACACCTCCACCACCGCCATGGTGA...TCTGCCTGTCAGACCATGAGACCTGTGACCTCTCTTCTGGGAGAAAACCTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR TCA 90 bp | GCCGAGGTAGGGGGACCACTGAAGAGAGACAGGTTACCTTTTCTAGAGATAGGAGCAGCGGCACACAGATaGCCAATAGCAGCTTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: AEVGGPLKRDRLPFLEIGAAAHR*PIAASS Trigger: CGAGGAAGCTGCTATTGGTCATCTGTGTGCCGCTGC...TCCTATCTCTAGAAAAGGTAACCTGTCTCTCTTCAGTGGTCCCCCTACCTCGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR TCA 90 bp | TTCTCCCAGAAGAGAGGTCACAGGTCTCATGGTCTGACAGGCAGAGTGCTCTGGTTACATCAAGACCCATaGGCTCAGCCTCCTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: FSQKRGHRSHGLTGRVLWLHQDP*AQPPQC Trigger: GCACTGAGGAGGCTGAGCTCATGGGTCTTGATGTAA...CCAGAGCACTCTGCCTGTCAGACCATGAGACCTGTGACCTCTCTTCTGGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR TCA 90 bp | GAACCCAAGGCACATCTCTCCCCTCAAAGGGCTCGTGGATGCATAGGAAGGACTGGGTGTACAGTGGATTaGTGTGCAGCGTTTCGGACA | + |
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Preference number: 4 (lower is better) Translates to: EPKAHLSPQRARGCIGRTGCTVD*CAAFRT Trigger: TGTCCGAAACGCTGCACATCAATCCACTGTACACCC...AGTCCTTCCTATGCATCCACGAGCCCTTTGAGGGGAGAGATGTGCCTTGGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | CTGGGGTTTATGCTTCTGGTGGTTTTCTCGGCCCAAGGCTTAGCTCTGGCTGTGTGTTGGAGAGCCACATaGACAGCATGGTGGTACAGC | + |
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Preference number: 4 (lower is better) Translates to: LGFMLLVVFSAQGLALAVCWRAT*TAWWYS Trigger: GCTGTACCACCATGCTGTCCATGTGGCTCTCCAACA...CACAGCCAGAGCTAAGCCTTGGGCCGAGAAAACCACCAGAAGCATAAACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | GCCGAGGTAGGGGGACCACTGAAGAGAGACAGGTTACCTTTTCTAGAGATAGGACTTGGAGCTGGGGGTTaGGACTCCTGGCTTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: AEVGGPLKRDRLPFLEIGLGAGG*DSWLFL Trigger: CAGGAAAAGCCAGGAGTCCCAACCCCCAGCTCCAAG...TCCTATCTCTAGAAAAGGTAACCTGTCTCTCTTCAGTGGTCCCCCTACCTCGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | GCCGAGGTAGGGGGACCACTGAAGAGAGACAGGTTACCTTTTCTAGAGATAGGACCCAGGAAGAGCCAGTaGATCCAGAACCAGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: AEVGGPLKRDRLPFLEIGPRKSQ*IQNQLT Trigger: GGTCAGCTGGTTCTGGATCCACTGGCTCTTCCTGGG...TCCTATCTCTAGAAAAGGTAACCTGTCTCTCTTCAGTGGTCCCCCTACCTCGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | ACCCAAGGCACATCTCTCCCCTCAAAGGGCTCGTGGATGCATAGGAAGGACTGGGGAATACAGAGACTGTaGCATCAGTGCGGTAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TQGTSLPSKGSWMHRKDWGIQRL*HQCGSL Trigger: AAGGCTACCGCACTGATGCCACAGTCTCTGTATTCC...CCAGTCCTTCCTATGCATCCACGAGCCCTTTGAGGGGAGAGATGTGCCTTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | GCACCAAGGCTTACAGTGTTTTCTGGTCTTCAAAAAGAGAGAGCTGGACACAGGCAGGGTGATAGCCCATaGCGGGAGGCTGCTCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: APRLTVFSGLQKERAGHRQGDSP*REAAQG Trigger: TCCCTGAGCAGCCTCCCGCCATGGGCTATCACCCTG...CCTGTGTCCAGCTCTCTCTTTTTGAAGACCAGAAAACACTGTAAGCCTTGGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | CTGGGGTTTATGCTTCTGGTGGTTTTCTCGGCCCAAGGCTTAGCTCTGGCTGTGGACCTTAGCCCAGGCTaGGAAAGCATCCAAGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: LGFMLLVVFSAQGLALAVDLSPG*ESIQVE Trigger: TTCCACTTGGATGCTTTCCCAGCCTGGGCTAAGGTC...CACAGCCAGAGCTAAGCCTTGGGCCGAGAAAACCACCAGAAGCATAAACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR GCA 90 bp | CCTCTCAGGGCACCAAGGCTTACAGTGTTTTCTGGTCTTCAAAAAGAGAGAGCTGCGTTGATGAGCTCCTaGAGCACCGCCTCCACGATG | + |
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Preference number: 4 (lower is better) Translates to: PLRAPRLTVFSGLQKERAALMSS*STASTM Trigger: CATCGTGGAGGCGGTGCTGCAGGAGCTCATCAACGC...AGCTCTCTCTTTTTGAAGACCAGAAAACACTGTAAGCCTTGGTGCCCTGAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | CTGGGGTTTATGCTTCTGGTGGTTTTCTCGGCCCAAGGCTTAGCTCTGGCTGTGGACCAGGGTGTACAGTaGATTGATGTGCAGCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LGFMLLVVFSAQGLALAVDQGVQ*IDVQRF Trigger: GAAACGCTGCACATCAATCCACTGTACACCCTGGTC...CACAGCCAGAGCTAAGCCTTGGGCCGAGAAAACCACCAGAAGCATAAACCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR TCA 90 bp | CCTCTCAGGGCACCAAGGCTTACAGTGTTTTCTGGTCTTCAAAAAGAGAGAGCTGCAGCGTGGTGTTCTTaGAGTACTCAGCCGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: PLRAPRLTVFSGLQKERAAAWCS*STQPPP Trigger: AGGTGGCGGCTGAGTACTTCAAGAACACCACGCTGC...AGCTCTCTCTTTTTGAAGACCAGAAAACACTGTAAGCCTTGGTGCCCTGAGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR GCA 90 bp | GTTTCCATCTCTTTCCTTTGGTGGAATCAGGCCAGCCTCCTTCTGAAGGAGAATCCACTTCTCCACAGCTaGTGCCACACAGATGACGCC | + |
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Preference number: 4 (lower is better) Translates to: VSISFLWWNQASLLLKENPLLHS*CHTDDA Trigger: GGCGTCATCTGTGTGGCAGCAGCTGTGGAGAAGTGG...ATTCTCCTTCAGAAGGAGGCTGGCCTGATTCCACCAAAGGAAAGAGATGGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR GCA 90 bp | CAAGGCTTACAGTGTTTTCTGGTCTTCAAAAAGAGAGAGCTGGACACAGGAAGACCCATGGCGGGAGGCTaGTCAGGGACAGCATCTGGT | + |
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Preference number: 4 (lower is better) Translates to: QGLQCFLVFKKRELDTGRPMAGG*SGTASG Trigger: ACCAGATGCTGTCCCTGAGCAGCCTCCCGCCATGGG...TCTTCCTGTGTCCAGCTCTCTCTTTTTGAAGACCAGAAAACACTGTAAGCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | TTCTCCCAGAAGAGAGGTCACAGGTCTCATGGTCTGACAGGCAGAGTGCTCTGGCAGGGCATAGTTTTCTaGAAGTCCTTCCACGTGATG | + |
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Preference number: 4 (lower is better) Translates to: FSQKRGHRSHGLTGRVLWQGIVF*KSFHVM Trigger: CATCACGTGGAAGGACTTCCAGAAAACTATGCCCTG...CCAGAGCACTCTGCCTGTCAGACCATGAGACCTGTGACCTCTCTTCTGGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | GCCGAGGTAGGGGGACCACTGAAGAGAGACAGGTTACCTTTTCTAGAGATAGGACCTTTGGAGGCTTCCTaGCCTGTTCCATCACTCTTT | + |
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Preference number: 4 (lower is better) Translates to: AEVGGPLKRDRLPFLEIGPLEAS*PVPSLF Trigger: AAAGAGTGATGGAACAGGCCAGGAAGCCTCCAAAGG...TCCTATCTCTAGAAAAGGTAACCTGTCTCTCTTCAGTGGTCCCCCTACCTCGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CCA 90 bp | GCCGAGGTAGGGGGACCACTGAAGAGAGACAGGTTACCTTTTCTAGAGATAGGAGGGAAAGCATCCAAGTaGAAGAGGCTAACTCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: AEVGGPLKRDRLPFLEIGGKASK*KRLTPQ Trigger: TTGGGGAGTTAGCCTCTTCCACTTGGATGCTTTCCC...TCCTATCTCTAGAAAAGGTAACCTGTCTCTCTTCAGTGGTCCCCCTACCTCGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR TCA 90 bp | GCACCAAGGCTTACAGTGTTTTCTGGTCTTCAAAAAGAGAGAGCTGGACACAGGGAGAGCAGGTCTCTTTaGAGTTGCAGCCCAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: APRLTVFSGLQKERAGHRESRSL*SCSPGR Trigger: TCTTCCTGGGCTGCAACTTCAAAGAGACCTGCTCTC...CCTGTGTCCAGCTCTCTCTTTTTGAAGACCAGAAAACACTGTAAGCCTTGGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR GCA 90 bp | AGACAGGTTACCTTTTCTAGAGATAGGACAGAAATGCTTGAGAACATGGGTGAGAACACAGCAGGAGCATaGCAGGCTTGGCTCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQVTFSRDRTEMLENMGENTAGA*QAWLPP Trigger: TGGCGGGAGCCAAGCCTGGCATGCTCCTGCTGTGTT...CTCACCCATGTTCTCAAGCATTTCTGTCCTATCTCTAGAAAAGGTAACCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR GCA 90 bp | GAACCCAAGGCACATCTCTCCCCTCAAAGGGCTCGTGGATGCATAGGAAGGACTCTGTTGCTGTTGGTTTaGTGTGTTGATGGATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EPKAHLSPQRARGCIGRTLLLLV*CVDGFG Trigger: ACCAAATCCATCAACACAGCAAACCAACAGCAACAG...AGTCCTTCCTATGCATCCACGAGCCCTTTGAGGGGAGAGATGTGCCTTGGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR GCA 90 bp | TTCTTGAGAGTTGGTGGTAAGAAAAGCAGGCAGGCTGGGAGGGAGACACAGCCAAGACTGTGGCATCAGTaGGGTAGCCTTTCTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLRVGGKKSRQAGRETQPRLWHQ*GSLSFQ Trigger: TTGAAAAGAAAGGCTACCGCACTGATGCCACAGTCT...TGGCTGTGTCTCCCTCCCAGCCTGCCTGCTTTTCTTACCACCAACTCTCAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR CCA 90 bp | TTCTTGAGAGTTGGTGGTAAGAAAAGCAGGCAGGCTGGGAGGGAGACACAGCCACACTTGCAGATCATTTaGTCATGGTGGGATCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FLRVGGKKSRQAGRETQPHLQII*SWWDLY Trigger: GTACAGATCCCACCATGACCAAATGATCTGCAAGTG...TGGCTGTGTCTCCCTCCCAGCCTGCCTGCTTTTCTTACCACCAACTCTCAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR TCA 90 bp | AGAGACAGGTTACCTTTTCTAGAGATAGGACAGAAATGCTTGAGAACATGGGTGTGGTGGAGGTGCCTATaGTGGTGGTCAGGCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: RDRLPFLEIGQKCLRTWVWWRCL*WWSGHQ Trigger: TTGGTGGCCTGACCACCATCATAGGCACCTCCACCA...CACCCATGTTCTCAAGCATTTCTGTCCTATCTCTAGAAAAGGTAACCTGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR TCA 90 bp | CCTCTCAGGGCACCAAGGCTTACAGTGTTTTCTGGTCTTCAAAAAGAGAGAGCTGCACCGTCATCAGAATaGAGAAAAAGGCGGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PLRAPRLTVFSGLQKERAAPSSE*RKRRSP Trigger: TGGTGACCGCCTTTTTCTTCATTCTGATGACGGTGC...AGCTCTCTCTTTTTGAAGACCAGAAAACACTGTAAGCCTTGGTGCCCTGAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| 3UTR CAA 72 bp | CAGGATGGTTGGTTGGTTTGTTTCCATCTCTTTCCTTaGGTGGAATCAGGCCAGCCTCCTTCTGAAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QDGWLVCFHLFP*VESGQPPSEGE Trigger: TTCTCCTTCAGAAGGAGGCTGGCCTGATTCCACCAAAGGAAAGAGATGGAAACAAACCAACCAACCATCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR TCA 90 bp | AGAGACAGGTTACCTTTTCTAGAGATAGGACAGAAATGCTTGAGAACATGGGTGTCCTGGCTTTTCCTGTaGCGGCTGCTGCTTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RDRLPFLEIGQKCLRTWVSWLFL*RLLLLL Trigger: CAGAAGAAGCAGCAGCCGTCACAGGAAAAGCCAGGA...CACCCATGTTCTCAAGCATTTCTGTCCTATCTCTAGAAAAGGTAACCTGTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR GCA 90 bp | CCTAATAAGACAGGTATGAACCTTTTTCCTCTCACCACACACAACACAATAGAACCGCCATCAAGACCATaGGCAGGGCGATGCGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PNKTGMNLFPLTTHNTIEPPSRP*AGRCAC Trigger: ACAAGCGCATCGCCCTGCGCATGGTCTTGATGGCGG...TTCTATTGTGTTGTGTGTGGTGAGAGGAAAAAGGTTCATACCTGTCTTATTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR GCA 90 bp | GGACCACTGAAGAGAGACAGGTTACCTTTTCTAGAGATAGGACAGAAATGCTTGTCCTGTGACGGCTGCTaGTTCTTCTGTTGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPLKRDRLPFLEIGQKCLSCDGC*FFCCCW Trigger: CCAACAGCAACAGAAGAAGCAGCAGCCGTCACAGGA...CAAGCATTTCTGTCCTATCTCTAGAAAAGGTAACCTGTCTCTCTTCAGTGGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR GCA 90 bp | GCCGAGGTAGGGGGACCACTGAAGAGAGACAGGTTACCTTTTCTAGAGATAGGATCAGAGAAAGGCACTTaGAGATCATTTGGTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: AEVGGPLKRDRLPFLEIGSEKGT*RSFGHG Trigger: ACCATGACCAAATGATCTGCAAGTGCCTTTCTCTGA...TCCTATCTCTAGAAAAGGTAACCTGTCTCTCTTCAGTGGTCCCCCTACCTCGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| 3UTR CAA 72 bp | TGCATAGAGAAGCTGACCTCAGGATGGTTGGTTGGTTaGTTTCCATCTCTTTCCTTTGGTGGAATCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CIEKLTSGWLVG*FPSLSFGGIRP Trigger: TGGCCTGATTCCACCAAAGGAAAGAGATGGAAACAAACCAACCAACCATCCTGAGGTCAGCTTCTCTATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR TCA 90 bp | GGACCACTGAAGAGAGACAGGTTACCTTTTCTAGAGATAGGACAGAAATGCTTGAATGCTCTAAGAAAATaGGGCTGGTGGAGGTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GPLKRDRLPFLEIGQKCLNALRK*GWWRCL Trigger: TAGGCACCTCCACCAGCCTCATTTTCTTAGAGCATT...CAAGCATTTCTGTCCTATCTCTAGAAAAGGTAACCTGTCTCTCTTCAGTGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR CCA 90 bp | GGACCACTGAAGAGAGACAGGTTACCTTTTCTAGAGATAGGACAGAAATGCTTGTTCTTGTTCAGTTCTTaGGTCTTGGAGCTGGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPLKRDRLPFLEIGQKCLFLFSS*VLELGV Trigger: AACCCCCAGCTCCAAGACCCAAGAACTGAACAAGAA...CAAGCATTTCTGTCCTATCTCTAGAAAAGGTAACCTGTCTCTCTTCAGTGGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR CCA 90 bp | AGACAGGTTACCTTTTCTAGAGATAGGACAGAAATGCTTGAGAACATGGGTGAGGATGGTGATGGTGGCTaGATTGCTGACAAACTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RQVTFSRDRTEMLENMGEDGDGG*IADKLR Trigger: ACGGAGTTTGTCAGCAATCCAGCCACCATCACCATC...CTCACCCATGTTCTCAAGCATTTCTGTCCTATCTCTAGAAAAGGTAACCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR GCA 90 bp | AGAGACAGGTTACCTTTTCTAGAGATAGGACAGAAATGCTTGAGAACATGGGTGTGCTGCTTCTTCTGTTaGTGTTGGTTTGCTGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RDRLPFLEIGQKCLRTWVCCFFC*CWFAVL Trigger: CAACACAGCAAACCAACAGCAACAGAAGAAGCAGCA...CACCCATGTTCTCAAGCATTTCTGTCCTATCTCTAGAAAAGGTAACCTGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR GCA 90 bp | CCTCTCAGGGCACCAAGGCTTACAGTGTTTTCTGGTCTTCAAAAAGAGAGAGCTTACTGGTTGTTGAAATaGTCTAAGAAAATGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLRAPRLTVFSGLQKERAYWLLK*SKKMRL Trigger: CAGCCTCATTTTCTTAGAGCATTTCAACAACCAGTA...AGCTCTCTCTTTTTGAAGACCAGAAAACACTGTAAGCCTTGGTGCCCTGAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR GCA 90 bp | AGACAGGTTACCTTTTCTAGAGATAGGACAGAAATGCTTGAGAACATGGGTGAGTGGTCTTCTTCTTCTTaGTCAGAGAGCAGGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQVTFSRDRTEMLENMGEWSSSS*SESRSL Trigger: AAGAGACCTGCTCTCTGAGCAAGAAGAAGAAGACCA...CTCACCCATGTTCTCAAGCATTTCTGTCCTATCTCTAGAAAAGGTAACCTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR TCA 90 bp | CCTAATAAGACAGGTATGAACCTTTTTCCTCTCACCACACACAACACAATAGAAGCTTCTTTGCTGGAATaGGGAAAAGCAGGAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PNKTGMNLFPLTTHNTIEASLLE*GKAGSQ Trigger: TTGGCTTCCTGCTTTTCCTCATTCCAGCAAAGAAGC...TTCTATTGTGTTGTGTGTGGTGAGAGGAAAAAGGTTCATACCTGTCTTATTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS GCA 90 bp | TCGGAGAACACCGAAGAACGGGTAGAGGAAGGCAGGCACGAGGGCTaGAGCTCCGAGAGGCACGGCCTCAGACACCCAGTACACAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SENTEERVEEGRHEG*SSERHGLRHPVHSG Trigger: ACCGCTGTGTACTGGGTGTCTGAGGCCGTGCCTCTCGGAGCTGCAGCCCTCGTGCCTGCCTTCCTCTACCCGTTCTTCGGTGTTCTCCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS GCA 90 bp | AGGGTGATAGCCCATGGCGGGAGGCTGCTCAGGGACAGCATCTGGTaGCCGATCCATGTGGAGAGGCCAGAGCTCTTGCTGCCAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RVIAHGGRLLRDSIW*PIHVERPELLLPEA Trigger: GGCTTCTGGCAGCAAGAGCTCTGGCCTCTCCACATGGATCGGGCACCAGATGCTGTCCCTGAGCAGCCTCCCGCCATGGGCTATCACCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS CCA 90 bp | AGCAGGGTGATAGCCCATGGCGGGAGGCTGCTCAGGGACAGCATCTaGTGCCCGATCCATGTGGAGAGGCCAGAGCTCTTGCTGCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SRVIAHGGRLLRDSI*CPIHVERPELLLPE Trigger: TTCTGGCAGCAAGAGCTCTGGCCTCTCCACATGGATCGGGCACCAGATGCTGTCCCTGAGCAGCCTCCCGCCATGGGCTATCACCCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS GCA 90 bp | GTTGTTTACATCAAGACCCATGAGCTCAGCCTCCTCAGTGCCGGCTaGCAGCTGTTCCTCCTCAGCGTTGATGAGCTCCTGCAGCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: VVYIKTHELSLLSAG*QLFLLSVDELLQHR Trigger: GCGGTGCTGCAGGAGCTCATCAACGCTGAGGAGGAACAGCTGGCAGCCGGCACTGAGGAGGCTGAGCTCATGGGTCTTGATGTAAACAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS GCA 90 bp | AACACAGCAGGAGCATGCCAGGCTTGGCTCCCGCCATCAAGACCATaGGCAGGGCGATGCGCTTGTGTAAATTCCACTTCTCCACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NTAGACQAWLPPSRP*AGRCACVNSTSPQL Trigger: CAGCTGTGGAGAAGTGGAATTTACACAAGCGCATCGCCCTGCGCATGGTCTTGATGGCGGGAGCCAAGCCTGGCATGCTCCTGCTGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS CCA 90 bp | CTCAGAGAGCAGGTCTCTTTGAAGTTGCAGCCCAGGAAGAGCCAGTaGATCCAGAACCAGCTGACCACCAGCATGATGAGCGAGATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LREQVSLKLQPRKSQ*IQNQLTTSMMSEMG Trigger: CCCCATCTCGCTCATCATGCTGGTGGTCAGCTGGTTCTGGATCCACTGGCTCTTCCTGGGCTGCAACTTCAAAGAGACCTGCTCTCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR CAA 90 bp | CTGGGGTTTATGCTTCTGGTGGTTTTCTCGGCCCAAGGCTTAGCTCTGGCTGTGAGCAGCGTGGTGTTCTaGAAGTACTCAGCCGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LGFMLLVVFSAQGLALAVSSVVF*KYSAAT Trigger: GGTGGCGGCTGAGTACTTCAAGAACACCACGCTGCT...CACAGCCAGAGCTAAGCCTTGGGCCGAGAAAACCACCAGAAGCATAAACCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS CCA 90 bp | GGTGGGATCTGTACTTCTTCTTGTTCAGTTCTTGGGTCTTGGAGCTaGGGGTTGGGACTCCTGGCTTTTCCTGTGACGGCTGCTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGICTSSCSVLGSWS*GLGLLAFPVTAAAS Trigger: AGAAGCAGCAGCCGTCACAGGAAAAGCCAGGAGTCCCAACCCCCAGCTCCAAGACCCAAGAACTGAACAAGAAGAAGTACAGATCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS CCA 90 bp | GGTCATGGTGGGATCTGTACTTCTTCTTGTTCAGTTCTTGGGTCTTaGAGCTGGGGGTTGGGACTCCTGGCTTTTCCTGTGACGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GHGGICTSSCSVLGS*SWGLGLLAFPVTAA Trigger: AGCAGCCGTCACAGGAAAAGCCAGGAGTCCCAACCCCCAGCTCCAAGACCCAAGAACTGAACAAGAAGAAGTACAGATCCCACCATGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR CAA 90 bp | GTTTCCATCTCTTTCCTTTGGTGGAATCAGGCCAGCCTCCTTCTGAAGGAGAATAGGAGCATGCCAGGCTaGGCTCCCGCCATCAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: VSISFLWWNQASLLLKENRSMPG*APAIKT Trigger: GGTCTTGATGGCGGGAGCCAAGCCTGGCATGCTCCT...ATTCTCCTTCAGAAGGAGGCTGGCCTGATTCCACCAAAGGAAAGAGATGGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR CAA 90 bp | CTGGGGTTTATGCTTCTGGTGGTTTTCTCGGCCCAAGGCTTAGCTCTGGCTGTGAGGGTGTACAGTGGATaGATGTGCAGCGTTTCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LGFMLLVVFSAQGLALAVRVYSG*MCSVSD Trigger: GTCCGAAACGCTGCACATCAATCCACTGTACACCCT...CACAGCCAGAGCTAAGCCTTGGGCCGAGAAAACCACCAGAAGCATAAACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS TCA 90 bp | TTCTTGGGTCTTGGAGCTGGGGGTTGGGACTCCTGGCTTTTCCTGTaGCGGCTGCTGCTTCTTCTGTTGCTGTTGGTTTGCTGTGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLGLGAGGWDSWLFL*RLLLLLLLLVCCVD Trigger: ATCAACACAGCAAACCAACAGCAACAGAAGAAGCAGCAGCCGTCACAGGAAAAGCCAGGAGTCCCAACCCCCAGCTCCAAGACCCAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS GCA 90 bp | TTGGAGCTGGGGGTTGGGACTCCTGGCTTTTCCTGTGACGGCTGCTaGTTCTTCTGTTGCTGTTGGTTTGCTGTGTTGATGGATTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LELGVGTPGFSCDGC*FFCCCWFAVLMDLV Trigger: CACCAAATCCATCAACACAGCAAACCAACAGCAACAGAAGAAGCAGCAGCCGTCACAGGAAAAGCCAGGAGTCCCAACCCCCAGCTCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS GCA 90 bp | GAGATTGACATGGTAACGGGGACCAGGGTGTACAGTGGATTGATGTaGAGCGTTTCGGACAGGGTACAAAGGATGGGCAGGAAGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EIDMVTGTRVYSGLM*SVSDRVQRMGRKMV Trigger: CACCATCTTCCTGCCCATCCTTTGTACCCTGTCCGAAACGCTGCACATCAATCCACTGTACACCCTGGTCCCCGTTACCATGTCAATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR CAA 90 bp | GCCGAGGTAGGGGGACCACTGAAGAGAGACAGGTTACCTTTTCTAGAGATAGGACAGGTCTCTTTGAAGTaGCAGCCCAGGAAGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AEVGGPLKRDRLPFLEIGQVSLK*QPRKSQ Trigger: CTGGCTCTTCCTGGGCTGCAACTTCAAAGAGACCTG...TCCTATCTCTAGAAAAGGTAACCTGTCTCTCTTCAGTGGTCCCCCTACCTCGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS GCA 90 bp | GTTGGGACTCCTGGCTTTTCCTGTGACGGCTGCTGCTTCTTCTGTTaGTGTTGGTTTGCTGTGTTGATGGATTTGGTGACCATGGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: VGTPGFSCDGCCFFC*CWFAVLMDLVTMGT Trigger: TGTGCCCATGGTCACCAAATCCATCAACACAGCAAACCAACAGCAACAGAAGAAGCAGCAGCCGTCACAGGAAAAGCCAGGAGTCCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS CCA 90 bp | TCAGTGATGTTGCTGACCTTAGCCCAGGCTGGGAAAGCATCCAAGTaGAAGAGGCTAACTCCCCAAGTATTGATGGCCACCATCACGATC | + |
|
Preference number: 5 (lower is better) Translates to: SVMLLTLAQAGKASK*KRLTPQVLMATITI Trigger: GATCGTGATGGTGGCCATCAATACTTGGGGAGTTAGCCTCTTCCACTTGGATGCTTTCCCAGCCTGGGCTAAGGTCAGCAACATCACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR CAA 90 bp | GTTTCCATCTCTTTCCTTTGGTGGAATCAGGCCAGCCTCCTTCTGAAGGAGAATTGTTCCTCCTCAGCGTaGATGAGCTCCTGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: VSISFLWWNQASLLLKENCSSSA*MSSCST Trigger: GGTGCTGCAGGAGCTCATCAACGCTGAGGAGGAACA...ATTCTCCTTCAGAAGGAGGCTGGCCTGATTCCACCAAAGGAAAGAGATGGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR CAA 90 bp | GAACCCAAGGCACATCTCTCCCCTCAAAGGGCTCGTGGATGCATAGGAAGGACTGCCGACGTGTCTTCATaGACAAAGATGAGTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: EPKAHLSPQRARGCIGRTADVSS*TKMSSM Trigger: CATGGAACTCATCTTTGTCAATGAAGACACGTCGGC...AGTCCTTCCTATGCATCCACGAGCCCTTTGAGGGGAGAGATGTGCCTTGGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR CAA 90 bp | GAACCCAAGGCACATCTCTCCCCTCAAAGGGCTCGTGGATGCATAGGAAGGACTCTGCTGCTTCTTCTGTaGCTGTTGGTTTGCTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EPKAHLSPQRARGCIGRTLLLLL*LLVCCV Trigger: AACACAGCAAACCAACAGCAACAGAAGAAGCAGCAG...AGTCCTTCCTATGCATCCACGAGCCCTTTGAGGGGAGAGATGTGCCTTGGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR CAA 90 bp | CTGGGGTTTATGCTTCTGGTGGTTTTCTCGGCCCAAGGCTTAGCTCTGGCTGTGGCACTTGCAGATCATTaGGTCATGGTGGGATCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LGFMLLVVFSAQGLALAVALADH*VMVGSV Trigger: TACAGATCCCACCATGACCAAATGATCTGCAAGTGC...CACAGCCAGAGCTAAGCCTTGGGCCGAGAAAACCACCAGAAGCATAAACCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR CAA 90 bp | GAACCCAAGGCACATCTCTCCCCTCAAAGGGCTCGTGGATGCATAGGAAGGACTCTCAGAGAAAGGCACTaGCAGATCATTTGGTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: EPKAHLSPQRARGCIGRTLRERH*QIIWSW Trigger: CCATGACCAAATGATCTGCAAGTGCCTTTCTCTGAG...AGTCCTTCCTATGCATCCACGAGCCCTTTGAGGGGAGAGATGTGCCTTGGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR CAA 90 bp | GGTGAGGTTTTCTCCCAGAAGAGAGGTCACAGGTCTCATGGTCTGACAGGCAGAGCCGCCGGGTACTGGTaGTTGAAATGCTCTAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GEVFSQKRGHRSHGLTGRAAGYW*LKCSKK Trigger: TTTCTTAGAGCATTTCAACAACCAGTACCCGGCGGC...TCTGCCTGTCAGACCATGAGACCTGTGACCTCTCTTCTGGGAGAAAACCTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS CCA 90 bp | ACTCCTGGCTTTTCCTGTGACGGCTGCTGCTTCTTCTGTTGCTGTTaGTTTGCTGTGTTGATGGATTTGGTGACCATGGGCACACCATTC | + |
|
Preference number: 5 (lower is better) Translates to: TPGFSCDGCCFFCCC*FAVLMDLVTMGTPF Trigger: GAATGGTGTGCCCATGGTCACCAAATCCATCAACACAGCAAACCAACAGCAACAGAAGAAGCAGCAGCCGTCACAGGAAAAGCCAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR CAA 90 bp | CCTCTCAGGGCACCAAGGCTTACAGTGTTTTCTGGTCTTCAAAAAGAGAGAGCTTTCAGTTCTTGGGTCTaGGAGCTGGGGGTTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: PLRAPRLTVFSGLQKERAFSSWV*ELGVGT Trigger: AGTCCCAACCCCCAGCTCCAAGACCCAAGAACTGAA...AGCTCTCTCTTTTTGAAGACCAGAAAACACTGTAAGCCTTGGTGCCCTGAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR CAA 90 bp | GCACCAAGGCTTACAGTGTTTTCTGGTCTTCAAAAAGAGAGAGCTGGACACAGGATGGGCTCTATCCCTTaGGAGGCTTCCTGGCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: APRLTVFSGLQKERAGHRMGSIP*EASWPV Trigger: AACAGGCCAGGAAGCCTCCAAAGGGATAGAGCCCAT...CCTGTGTCCAGCTCTCTCTTTTTGAAGACCAGAAAACACTGTAAGCCTTGGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
||
| CDS-3UTR CAA 90 bp | GCCGAGGTAGGGGGACCACTGAAGAGAGACAGGTTACCTTTTCTAGAGATAGGACTAACTCCCCAAGTATaGATGGCCACCATCACGATC | + |
|
Preference number: 5 (lower is better) Translates to: AEVGGPLKRDRLPFLEIGLTPQV*MATITI Trigger: GATCGTGATGGTGGCCATCAATACTTGGGGAGTTAG...TCCTATCTCTAGAAAAGGTAACCTGTCTCTCTTCAGTGGTCCCCCTACCTCGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CCA 90 bp | ATCATTTGGTCATGGTGGGATCTGTACTTCTTCTTGTTCAGTTCTTaGGTCTTGGAGCTGGGGGTTGGGACTCCTGGCTTTTCCTGTGAC | + |
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Preference number: 5 (lower is better) Translates to: IIWSWWDLYFFLFSS*VLELGVGTPGFSCD Trigger: GTCACAGGAAAAGCCAGGAGTCCCAACCCCCAGCTCCAAGACCCAAGAACTGAACAAGAAGAAGTACAGATCCCACCATGACCAAATGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS GCA 90 bp | GGGCACACCATTCAGATTCTTGCTCTGCATCAGAGAAGTGAAGTCTaGAGCCGACGTGTCTTCATTGACAAAGATGAGTTCCATGGACGT | + |
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Preference number: 5 (lower is better) Translates to: GHTIQILALHQRSEV*SRRVFIDKDEFHGR Trigger: ACGTCCATGGAACTCATCTTTGTCAATGAAGACACGTCGGCTGCAGACTTCACTTCTCTGATGCAGAGCAAGAATCTGAATGGTGTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CAA 90 bp | TTCTTGAGAGTTGGTGGTAAGAAAAGCAGGCAGGCTGGGAGGGAGACACAGCCAGATCTGTACTTCTTCTaGTTCAGTTCTTGGGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: FLRVGGKKSRQAGRETQPDLYFF*FSSWVL Trigger: CAAGACCCAAGAACTGAACAAGAAGAAGTACAGATC...TGGCTGTGTCTCCCTCCCAGCCTGCCTGCTTTTCTTACCACCAACTCTCAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS TCA 90 bp | CTGTTCCATCACTCTTTTTCCCAAAGCAGGGCTTCTTTGCTGGAATaGGGAAAAGCAGGAAGCCAAGGAATACAGAGACTGTGGCATCAG | + |
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Preference number: 5 (lower is better) Translates to: LFHHSFSQSRASLLE*GKAGSQGIQRLWHQ Trigger: CTGATGCCACAGTCTCTGTATTCCTTGGCTTCCTGCTTTTCCTCATTCCAGCAAAGAAGCCCTGCTTTGGGAAAAAGAGTGATGGAACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CAA 90 bp | GTTTCCATCTCTTTCCTTTGGTGGAATCAGGCCAGCCTCCTTCTGAAGGAGAATGCCGGGTACTGGTTGTaGAAATGCTCTAAGAAAATG | + |
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Preference number: 5 (lower is better) Translates to: VSISFLWWNQASLLLKENAGYWL*KCSKKM Trigger: CATTTTCTTAGAGCATTTCAACAACCAGTACCCGGC...ATTCTCCTTCAGAAGGAGGCTGGCCTGATTCCACCAAAGGAAAGAGATGGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS-3UTR CAA 90 bp | CCTAATAAGACAGGTATGAACCTTTTTCCTCTCACCACACACAACACAATAGAACTTCTTGTTCAGTTCTaGGGTCTTGGAGCTGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: PNKTGMNLFPLTTHNTIELLVQF*GLGAGG Trigger: ACCCCCAGCTCCAAGACCCAAGAACTGAACAAGAAG...TTCTATTGTGTTGTGTGTGGTGAGAGGAAAAAGGTTCATACCTGTCTTATTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 72 bp | TCCTCAGTGCCGGCTGCCAGCTGTTCCTCCTCAGCGTaGATGAGCTCCTGCAGCACCGCCTCCACGATGGGC | + |
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Preference number: 6 (lower is better) Translates to: SSVPAASCSSSA*MSSCSTASTMG Trigger: GCCCATCGTGGAGGCGGTGCTGCAGGAGCTCATCAACGCTGAGGAGGAACAGCTGGCAGCCGGCACTGAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS GCA 72 bp | GGTGCCCGATCCATGTGGAGAGGCCAGAGCTCTTGCTaGCAGAAGCCAGGGCGTAGCCTCCTCCCACCAGAA | + |
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Preference number: 6 (lower is better) Translates to: GARSMWRGQSSC*QKPGRSLLPPE Trigger: TTCTGGTGGGAGGAGGCTACGCCCTGGCTTCTGGCAGCAAGAGCTCTGGCCTCTCCACATGGATCGGGCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CCA 72 bp | ATAGCCCATGGCGGGAGGCTGCTCAGGGACAGCATCTaGTGCCCGATCCATGTGGAGAGGCCAGAGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: IAHGGRLLRDSI*CPIHVERPELL Trigger: CAAGAGCTCTGGCCTCTCCACATGGATCGGGCACCAGATGCTGTCCCTGAGCAGCCTCCCGCCATGGGCTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CCA 72 bp | CGGTCACAAGCAACACGTAAGCACACGCAGCTTCGCTaGTGGGGTAGATGGTGGGCAGAGGCAGCAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RSQATRKHTQLR*WGRWWAEAAAA Trigger: TGCTGCTGCTGCCTCTGCCCACCATCTACCCCACCAGCGAAGCTGCGTGTGCTTACGTGTTGCTTGTGACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 90 bp | GCTGCTGCCACACAGATGACGCCCACCAACAGCAGCGTGGTGTTCTaGAAGTACTCAGCCGCCACCTCACTGGATCGGAGAACACCGAAG | + |
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Preference number: 6 (lower is better) Translates to: AAATQMTPTNSSVVF*KYSAATSLDRRTPK Trigger: CTTCGGTGTTCTCCGATCCAGTGAGGTGGCGGCTGAGTACTTCAAGAACACCACGCTGCTGTTGGTGGGCGTCATCTGTGTGGCAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS TCA 72 bp | TGGAGAGCCACATGGACAGCATGGTGGTACAGCACATaGAACACAGCAGGAGCATGCCAGGCTTGGCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: WRATWTAWWYST*NTAGACQAWLP Trigger: CGGGAGCCAAGCCTGGCATGCTCCTGCTGTGTTTCATGTGCTGTACCACCATGCTGTCCATGTGGCTCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS TCA 72 bp | GGGGTTGCCCACGGGCAGCATCACAGCGAAGGAGATTaGCATGGTAACGGGGACCAGGGTGTACAGTGGATT | + |
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Preference number: 6 (lower is better) Translates to: GVAHGQHHSEGD*HGNGDQGVQWI Trigger: AATCCACTGTACACCCTGGTCCCCGTTACCATGTCAATCTCCTTCGCTGTGATGCTGCCCGTGGGCAACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS GCA 72 bp | GGAGCATGCCAGGCTTGGCTCCCGCCATCAAGACCATaGGCAGGGCGATGCGCTTGTGTAAATTCCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: GACQAWLPPSRP*AGRCACVNSTS Trigger: AGAAGTGGAATTTACACAAGCGCATCGCCCTGCGCATGGTCTTGATGGCGGGAGCCAAGCCTGGCATGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 72 bp | ACACAGATGACGCCCACCAACAGCAGCGTGGTGTTCTaGAAGTACTCAGCCGCCACCTCACTGGATCGGAGA | + |
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Preference number: 6 (lower is better) Translates to: TQMTPTNSSVVF*KYSAATSLDRR Trigger: TCTCCGATCCAGTGAGGTGGCGGCTGAGTACTTCAAGAACACCACGCTGCTGTTGGTGGGCGTCATCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS TCA 72 bp | CCATGGACGTCTGTCTGTTGTTTACATCAAGACCCATaGGCTCAGCCTCCTCAGTGCCGGCTGCCAGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: PWTSVCCLHQDP*AQPPQCRLPAV Trigger: AACAGCTGGCAGCCGGCACTGAGGAGGCTGAGCTCATGGGTCTTGATGTAAACAACAGACAGACGTCCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS GCA 72 bp | CTGGGGGTTGGGACTCCTGGCTTTTCCTGTGACGGCTaGTGCTTCTTCTGTTGCTGTTGGTTTGCTGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: LGVGTPGFSCDG*CFFCCCWFAVL Trigger: CAACACAGCAAACCAACAGCAACAGAAGAAGCAGCAGCCGTCACAGGAAAAGCCAGGAGTCCCAACCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 90 bp | TGGTCATGGTGGGATCTGTACTTCTTCTTGTTCAGTTCTTGGGTCTaGGAGCTGGGGGTTGGGACTCCTGGCTTTTCCTGTGACGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: WSWWDLYFFLFSSWV*ELGVGTPGFSCDGC Trigger: GCAGCCGTCACAGGAAAAGCCAGGAGTCCCAACCCCCAGCTCCAAGACCCAAGAACTGAACAAGAAGAAGTACAGATCCCACCATGACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 90 bp | CTCCTGGTCTTCTTCTTCTTGCTCAGAGAGCAGGTCTCTTTGAAGTaGCAGCCCAGGAAGAGCCAGTGGATCCAGAACCAGCTGACCACC | + |
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Preference number: 6 (lower is better) Translates to: LLVFFFLLREQVSLK*QPRKSQWIQNQLTT Trigger: GGTGGTCAGCTGGTTCTGGATCCACTGGCTCTTCCTGGGCTGCAACTTCAAAGAGACCTGCTCTCTGAGCAAGAAGAAGAAGACCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS GCA 72 bp | GGGGTTGGGACTCCTGGCTTTTCCTGTGACGGCTGCTaGTTCTTCTGTTGCTGTTGGTTTGCTGTGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: GVGTPGFSCDGC*FFCCCWFAVLM Trigger: CATCAACACAGCAAACCAACAGCAACAGAAGAAGCAGCAGCCGTCACAGGAAAAGCCAGGAGTCCCAACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 90 bp | CGGATCCTCTTCTCTGATAGCTCCTCCCTCCTGGTCTTCTTCTTCTaGCTCAGAGAGCAGGTCTCTTTGAAGTTGCAGCCCAGGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: RILFSDSSSLLVFFF*LREQVSLKLQPRKS Trigger: GCTCTTCCTGGGCTGCAACTTCAAAGAGACCTGCTCTCTGAGCAAGAAGAAGAAGACCAGGAGGGAGGAGCTATCAGAGAAGAGGATCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 90 bp | CAGGCTGGGAAAGCATCCAAGTGGAAGAGGCTAACTCCCCAAGTATaGATGGCCACCATCACGATCACCAGACCGATGACATTGACTCCC | + |
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Preference number: 6 (lower is better) Translates to: QAGKASKWKRLTPQV*MATITITRPMTLTP Trigger: GGGAGTCAATGTCATCGGTCTGGTGATCGTGATGGTGGCCATCAATACTTGGGGAGTTAGCCTCTTCCACTTGGATGCTTTCCCAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CCA 72 bp | TGTACTTCTTCTTGTTCAGTTCTTGGGTCTTGGAGCTaGGGGTTGGGACTCCTGGCTTTTCCTGTGACGGCT | + |
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Preference number: 6 (lower is better) Translates to: CTSSCSVLGSWS*GLGLLAFPVTA Trigger: AGCCGTCACAGGAAAAGCCAGGAGTCCCAACCCCCAGCTCCAAGACCCAAGAACTGAACAAGAAGAAGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 72 bp | GTCATGGTGGGATCTGTACTTCTTCTTGTTCAGTTCTaGGGTCTTGGAGCTGGGGGTTGGGACTCCTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: VMVGSVLLLVQF*GLGAGGWDSWL Trigger: AAGCCAGGAGTCCCAACCCCCAGCTCCAAGACCCAAGAACTGAACAAGAAGAAGTACAGATCCCACCATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 90 bp | AGGCACTTGCAGATCATTTGGTCATGGTGGGATCTGTACTTCTTCTaGTTCAGTTCTTGGGTCTTGGAGCTGGGGGTTGGGACTCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RHLQIIWSWWDLYFF*FSSWVLELGVGTPG Trigger: GCCAGGAGTCCCAACCCCCAGCTCCAAGACCCAAGAACTGAACAAGAAGAAGTACAGATCCCACCATGACCAAATGATCTGCAAGTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 90 bp | ATCTGTACTTCTTCTTGTTCAGTTCTTGGGTCTTGGAGCTGGGGGTaGGGACTCCTGGCTTTTCCTGTGACGGCTGCTGCTTCTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: ICTSSCSVLGSWSWG*GLLAFPVTAAASSV Trigger: AACAGAAGAAGCAGCAGCCGTCACAGGAAAAGCCAGGAGTCCCAACCCCCAGCTCCAAGACCCAAGAACTGAACAAGAAGAAGTACAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS GCA 72 bp | CCTGGCTTTTCCTGTGACGGCTGCTGCTTCTTCTGTTaGTGTTGGTTTGCTGTGTTGATGGATTTGGTGACC | + |
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Preference number: 6 (lower is better) Translates to: PGFSCDGCCFFC*CWFAVLMDLVT Trigger: GGTCACCAAATCCATCAACACAGCAAACCAACAGCAACAGAAGAAGCAGCAGCCGTCACAGGAAAAGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CCA 72 bp | TCATGGTGGGATCTGTACTTCTTCTTGTTCAGTTCTTaGGTCTTGGAGCTGGGGGTTGGGACTCCTGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SWWDLYFFLFSS*VLELGVGTPGF Trigger: AAAGCCAGGAGTCCCAACCCCCAGCTCCAAGACCCAAGAACTGAACAAGAAGAAGTACAGATCCCACCATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 72 bp | TTCTCTGATAGCTCCTCCCTCCTGGTCTTCTTCTTCTaGCTCAGAGAGCAGGTCTCTTTGAAGTTGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: FSDSSSLLVFFF*LREQVSLKLQP Trigger: GGGCTGCAACTTCAAAGAGACCTGCTCTCTGAGCAAGAAGAAGAAGACCAGGAGGGAGGAGCTATCAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 72 bp | TGGAAGTCCTTCCACGTGATGATGGGCTCTATCCCTTaGGAGGCTTCCTGGCCTGTTCCATCACTCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: WKSFHVMMGSIP*EASWPVPSLFF Trigger: GAAAAAGAGTGATGGAACAGGCCAGGAAGCCTCCAAAGGGATAGAGCCCATCATCACGTGGAAGGACTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 72 bp | TTGATGGCCACCATCACGATCACCAGACCGATGACATaGACTCCCAGACCGGCTTTCACCATGTCTTTGATC | + |
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Preference number: 6 (lower is better) Translates to: LMATITITRPMT*TPRPAFTMSLI Trigger: GATCAAAGACATGGTGAAAGCCGGTCTGGGAGTCAATGTCATCGGTCTGGTGATCGTGATGGTGGCCATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 90 bp | GACGTGTCTTCATTGACAAAGATGAGTTCCATGGACGTCTGTCTGTaGTTTACATCAAGACCCATGAGCTCAGCCTCCTCAGTGCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: DVSSLTKMSSMDVCL*FTSRPMSSASSVPA Trigger: AGCCGGCACTGAGGAGGCTGAGCTCATGGGTCTTGATGTAAACAACAGACAGACGTCCATGGAACTCATCTTTGTCAATGAAGACACGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 90 bp | GCTGTGTTGATGGATTTGGTGACCATGGGCACACCATTCAGATTCTaGCTCTGCATCAGAGAAGTGAAGTCTGCAGCCGACGTGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: AVLMDLVTMGTPFRF*LCIREVKSAADVSS Trigger: TGAAGACACGTCGGCTGCAGACTTCACTTCTCTGATGCAGAGCAAGAATCTGAATGGTGTGCCCATGGTCACCAAATCCATCAACACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 90 bp | TCCTGTGACGGCTGCTGCTTCTTCTGTTGCTGTTGGTTTGCTGTGTaGATGGATTTGGTGACCATGGGCACACCATTCAGATTCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SCDGCCFFCCCWFAV*MDLVTMGTPFRFLL Trigger: GAGCAAGAATCTGAATGGTGTGCCCATGGTCACCAAATCCATCAACACAGCAAACCAACAGCAACAGAAGAAGCAGCAGCCGTCACAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 72 bp | ATGGATTTGGTGACCATGGGCACACCATTCAGATTCTaGCTCTGCATCAGAGAAGTGAAGTCTGCAGCCGAC | + |
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Preference number: 6 (lower is better) Translates to: MDLVTMGTPFRF*LCIREVKSAAD Trigger: GTCGGCTGCAGACTTCACTTCTCTGATGCAGAGCAAGAATCTGAATGGTGTGCCCATGGTCACCAAATCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 72 bp | AAAGCATCCAAGTGGAAGAGGCTAACTCCCCAAGTATaGATGGCCACCATCACGATCACCAGACCGATGACA | + |
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Preference number: 6 (lower is better) Translates to: KASKWKRLTPQV*MATITITRPMT Trigger: TGTCATCGGTCTGGTGATCGTGATGGTGGCCATCAATACTTGGGGAGTTAGCCTCTTCCACTTGGATGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 90 bp | GGCTGCTGCTTCTTCTGTTGCTGTTGGTTTGCTGTGTTGATGGATTaGGTGACCATGGGCACACCATTCAGATTCTTGCTCTGCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: GCCFFCCCWFAVLMD*VTMGTPFRFLLCIR Trigger: TCTGATGCAGAGCAAGAATCTGAATGGTGTGCCCATGGTCACCAAATCCATCAACACAGCAAACCAACAGCAACAGAAGAAGCAGCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 90 bp | ATAGTTTTCTGGAAGTCCTTCCACGTGATGATGGGCTCTATCCCTTaGGAGGCTTCCTGGCCTGTTCCATCACTCTTTTTCCCAAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: IVFWKSFHVMMGSIP*EASWPVPSLFFPKQ Trigger: CTGCTTTGGGAAAAAGAGTGATGGAACAGGCCAGGAAGCCTCCAAAGGGATAGAGCCCATCATCACGTGGAAGGACTTCCAGAAAACTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS TCA 72 bp | CACTCTTTTTCCCAAAGCAGGGCTTCTTTGCTGGAATaGGGAAAAGCAGGAAGCCAAGGAATACAGAGACTG | + |
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Preference number: 6 (lower is better) Translates to: HSFSQSRASLLE*GKAGSQGIQRL Trigger: CAGTCTCTGTATTCCTTGGCTTCCTGCTTTTCCTCATTCCAGCAAAGAAGCCCTGCTTTGGGAAAAAGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 72 bp | ATCAGAGAAGTGAAGTCTGCAGCCGACGTGTCTTCATaGACAAAGATGAGTTCCATGGACGTCTGTCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: IREVKSAADVSS*TKMSSMDVCLL Trigger: CAACAGACAGACGTCCATGGAACTCATCTTTGTCAATGAAGACACGTCGGCTGCAGACTTCACTTCTCTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 90 bp | TTGCTCTGCATCAGAGAAGTGAAGTCTGCAGCCGACGTGTCTTCATaGACAAAGATGAGTTCCATGGACGTCTGTCTGTTGTTTACATCA | + |
|
Preference number: 6 (lower is better) Translates to: LLCIREVKSAADVSS*TKMSSMDVCLLFTS Trigger: TGATGTAAACAACAGACAGACGTCCATGGAACTCATCTTTGTCAATGAAGACACGTCGGCTGCAGACTTCACTTCTCTGATGCAGAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 72 bp | TCATTGACAAAGATGAGTTCCATGGACGTCTGTCTGTaGTTTACATCAAGACCCATGAGCTCAGCCTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLTKMSSMDVCL*FTSRPMSSASS Trigger: TGAGGAGGCTGAGCTCATGGGTCTTGATGTAAACAACAGACAGACGTCCATGGAACTCATCTTTGTCAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS CAA 72 bp | TTCTTCTGTTGCTGTTGGTTTGCTGTGTTGATGGATTaGGTGACCATGGGCACACCATTCAGATTCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: FFCCCWFAVLMD*VTMGTPFRFLL Trigger: GAGCAAGAATCTGAATGGTGTGCCCATGGTCACCAAATCCATCAACACAGCAAACCAACAGCAACAGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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| CDS GCA 72 bp | ATTCAGATTCTTGCTCTGCATCAGAGAAGTGAAGTCTaGAGCCGACGTGTCTTCATTGACAAAGATGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: IQILALHQRSEV*SRRVFIDKDEF Trigger: GAACTCATCTTTGTCAATGAAGACACGTCGGCTGCAGACTTCACTTCTCTGATGCAGAGCAAGAATCTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031868.5 |
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