Pregenerated sensors for SLC13A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018459Ensembl transcript IDs: ENSMUST00000029208.15, ENSMUST00000109279.3
Found 238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCTGAGGGATACACACCACAGCCCTCTGAGAGCTCCGGAAGTGTaGACAGGGGAGACAGTGCAGGAAGGGAAGTTGGAGGTCAGATTT | + |
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Preference number: 1 (lower is better) Translates to: GLRDTHHSPLRAPEV*TGETVQEGKLEVRF Trigger: AAATCTGACCTCCAACTTCCCTTCCTGCACTGTCTCCCCTGTGCACACTTCCGGAGCTCTCAGAGGGCTGTGGTGTGTATCCCTCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| 3UTR GCA 90 bp | GGGGAAAGCAGCAGAGAGACTCCAGGAAGACCTGTGTCCTCCCTCTaGCTCAGGCAATGGAAGCTAATCTCTAGTGGCCCGGATCATCTA | + |
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Preference number: 1 (lower is better) Translates to: GESSRETPGRPVSSL*LRQWKLISSGPDHL Trigger: TAGATGATCCGGGCCACTAGAGATTAGCTTCCATTGCCTGAGGCAGAGGGAGGACACAGGTCTTCCTGGAGTCTCTCTGCTGCTTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR CCA 90 bp | AAATGCATGAGAAAGAAAGAGAAGGTGCTGCAGACAGTGAGCCGGTaGCTCCAGGAAACCACTGGAGGATGTCCTTGCTTGCTGCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: KCMRKKEKVLQTVSR*LQETTGGCPCLLPP Trigger: AGGAGGCAGCAAGCAAGGACATCCTCCAGTGGTTTCCTGGAGCCACCGGCTCACTGTCTGCAGCACCTTCTCTTTCTTTCTCATGCATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR CCA 90 bp | AACATCTGGCCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTaGTCCAGAGACCTAAAGCCAATGGCAGCCGTGACTATCGATACC | + |
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Preference number: 1 (lower is better) Translates to: NIWPRALESQSLSCL*SRDLKPMAAVTIDT Trigger: GGTATCGATAGTCACGGCTGCCATTGGCTTTAGGTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR CCA 90 bp | AAAAGAGAGGGCAGAATCGAGCCTGCTGCGAACAACTGTAACATCTaGCCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: KREGRIEPAANNCNI*PRALESQSLSCLWS Trigger: GGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGATGTTACAGTTGTTCGCAGCAGGCTCGATTCTGCCCTCTCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR CCA 90 bp | GTCAGGGAGCAAGAGAATGGCTTTTGTTGTTTATACTGTCCAGGATaGGCTGAGGGATACACACCACAGCCCTCTGAGAGCTCCGGAAGT | + |
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Preference number: 1 (lower is better) Translates to: VREQENGFCCLYCPG*AEGYTPQPSESSGS Trigger: ACTTCCGGAGCTCTCAGAGGGCTGTGGTGTGTATCCCTCAGCCCATCCTGGACAGTATAAACAACAAAAGCCATTCTCTTGCTCCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| 3UTR GCA 90 bp | ACTGAGCACTGGCGGTGTGCTGGAACCTGGTCCAGACATCTGAGTTaGGTCAGGGAGCAAGAGAATGGCTTTTGTTGTTTATACTGTCCA | + |
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Preference number: 1 (lower is better) Translates to: TEHWRCAGTWSRHLS*VREQENGFCCLYCP Trigger: TGGACAGTATAAACAACAAAAGCCATTCTCTTGCTCCCTGACGCAACTCAGATGTCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| 3UTR CCA 90 bp | TACATGGGGCAAATATTTACTGAGCACTGGCGGTGTGCTGGAACCTaGTCCAGACATCTGAGTTGCGTCAGGGAGCAAGAGAATGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: YMGQIFTEHWRCAGT*SRHLSCVREQENGF Trigger: AAAGCCATTCTCTTGCTCCCTGACGCAACTCAGATGTCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGTAAATATTTGCCCCATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| 3UTR TCA 90 bp | AGACAGTGCAGGAAGGGAAGTTGGAGGTCAGATTTGCAGAAGTCCTaGCCAGGAATCTGGGGTTTCATTCTGAAAGGCCAAGAGTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: RQCRKGSWRSDLQKS*PGIWGFILKGQESS Trigger: TGAAGACTCTTGGCCTTTCAGAATGAAACCCCAGATTCCTGGTCAGGACTTCTGCAAATCTGACCTCCAACTTCCCTTCCTGCACTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| 3UTR TCA 90 bp | TATTTACTGAGCACTGGCGGTGTGCTGGAACCTGGTCCAGACATCTaGGTTGCGTCAGGGAGCAAGAGAATGGCTTTTGTTGTTTATACT | + |
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Preference number: 1 (lower is better) Translates to: YLLSTGGVLEPGPDI*VASGSKRMAFVVYT Trigger: AGTATAAACAACAAAAGCCATTCTCTTGCTCCCTGACGCAACTCAGATGTCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGTAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| 3UTR TCA 90 bp | TTTCTCTCACCCTTGAAGATCATGGCTTTTGCAAATAAGACTTATTaGCCACTTGGGGTGGGAGTAGGGAGGACAAACCCAGTTGTCAGG | + |
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Preference number: 1 (lower is better) Translates to: FLSPLKIMAFANKTY*PLGVGVGRTNPVVR Trigger: CCTGACAACTGGGTTTGTCCTCCCTACTCCCACCCCAAGTGGTCAATAAGTCTTATTTGCAAAAGCCATGATCTTCAAGGGTGAGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGAAGCTGATTCAGTCCTACGTTGTCACCTCTCGCTGAGGGCCCCCTCCACGAGTGGAAGGCTGTCTTaGGTGGGGTGGGGTAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: AEADSVLRCHLSLRAPSTSGRLS*VGWGRE Trigger: CTCTCTACCCCACCCCACCCAAGACAGCCTTCCACT...CGTGGAGGGGGCCCTCAGCGAGAGGTGACAACGTAGGACTGAATCAGCTTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR TCA 90 bp | GCTTCCTGGCTTCAGCCTCTAGTGGAAGGCTGTCTTGGGTGGGGTGGGGTAGAGGCTCCTAGCAGCAAGTaGCAGCAACAGCCTTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: ASWLQPLVEGCLGWGGVEAPSSK*QQQPSG Trigger: TCCAGAAGGCTGTTGCTGTCACTTGCTGCTAGGAGC...CTCTACCCCACCCCACCCAAGACAGCCTTCCACTAGAGGCTGAAGCCAGGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTATGGTCCCAAGGCTGTGGTTCTCTCTGTGCATGTCCGTCCTTGTCCCCCGGCTCCTAGCAGCAAGTaGCAGCAACAGCCTTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: SYGPKAVVLSVHVRPCPPAPSSK*QQQPSG Trigger: TCCAGAAGGCTGTTGCTGTCACTTGCTGCTAGGAGC...CGGGGGACAAGGACGGACATGCACAGAGAGAACCACAGCCTTGGGACCATAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTCTGCAGCCACAGAGCCCCTCTCAAGGGCCCAGCAGGGCTGACCTAGAGCAGGAAAGAATTGCTTaGTCAGCTTGGAGGCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: TALQPQSPSQGPSRADLEQERIA*SAWRLL Trigger: TAGGAGCCTCCAAGCTGATCAAGCAATTCTTTCCTG...CTCTAGGTCAGCCCTGCTGGGCCCTTGAGAGGGGCTCTGTGGCTGCAGAGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR CCA 90 bp | AAAACAGCTCTGCAGCCACAGAGCCCCTCTCAAGGGCCCAGCAGGGCTGACCTACAGCTTTGCTCCTGGTaGCTGAAGTGGACTTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: KTALQPQSPSQGPSRADLQLCSW*LKWTFL Trigger: CAGGAAAGTCCACTTCAGCCACCAGGAGCAAAGCTG...TAGGTCAGCCCTGCTGGGCCCTTGAGAGGGGCTCTGTGGCTGCAGAGCTGTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGCCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGACTTTGCTCCTGGTGGCTaGAGTGGACTTTCCTGCACC | + |
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Preference number: 2 (lower is better) Translates to: IWPRALESQSLSCLWSRDFAPGG*SGLSCT Trigger: GGTGCAGGAAAGTCCACTTCAGCCACCAGGAGCAAA...GTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR GCA 90 bp | GCTTCCTGGCTTCAGCCTCTAGTGGAAGGCTGTCTTGGGTGGGGTGGGGTAGAGGAGGATGTCCTTGCTTaGTGCCTCCTATCAGATTAC | + |
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Preference number: 2 (lower is better) Translates to: ASWLQPLVEGCLGWGGVEEDVLA*CLLSDY Trigger: GTAATCTGATAGGAGGCAGCAAGCAAGGACATCCTC...CTCTACCCCACCCCACCCAAGACAGCCTTCCACTAGAGGCTGAAGCCAGGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCTCTGGAGGAAGTGATAGCTCCACCCCCAGGTACCAGCAGAGTTCTGAGATGCCATTTCAGCTTTaGTCCTGGTGGCTGAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PPSGGSDSSTPRYQQSSEMPFQL*SWWLKW Trigger: CCACTTCAGCCACCAGGAGCAAAGCTGAAATGGCAT...CTCAGAACTCTGCTGGTACCTGGGGGTGGAGCTATCACTTCCTCCAGAGGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR CAA 90 bp | AGAGCTCCGGAAGTGTGCACAGGGGAGACAGTGCAGGAAGGGAAGTaGGAGGTCAGATTTGCAGAAGTCCTGACCAGGAATCTGGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: RAPEVCTGETVQEGK*EVRFAEVLTRNLGF Trigger: AAACCCCAGATTCCTGGTCAGGACTTCTGCAAATCTGACCTCCAACTTCCCTTCCTGCACTGTCTCCCCTGTGCACACTTCCGGAGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| 3UTR-3UTR TCA 90 bp | TTGGGTAGATGTGTGAGCTGGAGTTTCTTGACACCCCCTCTCCCCCATAGTGTGTTTGCTCCTGGTGGCTaGAGTGGACTTTCCTGCACC | + |
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Preference number: 2 (lower is better) Translates to: LGRCVSWSFLTPPLPHSVFAPGG*SGLSCT Trigger: GGTGCAGGAAAGTCCACTTCAGCCACCAGGAGCAAA...CACACTATGGGGGAGAGGGGGTGTCAAGAAACTCCAGCTCACACATCTACCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR TCA 90 bp | GCTGAAGCTGATTCAGTCCTACGTTGTCACCTCTCGCTGAGGGCCCCCTCCACGGCAAATAAGACTTATTaGCCACTTGGGGTGGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: AEADSVLRCHLSLRAPSTANKTY*PLGVGV Trigger: TACTCCCACCCCAAGTGGTCAATAAGTCTTATTTGC...CGTGGAGGGGGCCCTCAGCGAGAGGTGACAACGTAGGACTGAATCAGCTTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR TCA 90 bp | TGGGAAAATACTCTGACTCACTTGTGCTATCCCTGGGATGTCCTCCCTCTGGAGGTACCAGCAGAGTTCTaGGTCACCCACTGTCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: WENTLTHLCYPWDVLPLEVPAEF*VTHCPH Trigger: GTGGGGACAGTGGGTGACTCAGAACTCTGCTGGTAC...CTCCAGAGGGAGGACATCCCAGGGATAGCACAAGTGAGTCAGAGTATTTTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTCTGCAGCCACAGAGCCCCTCTCAAGGGCCCAGCAGGGCTGACCTAGAGGGTGTGAAAAACAAATaGCATTTCAGCTTTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: TALQPQSPSQGPSRADLEGVKNK*HFSFAP Trigger: AGGAGCAAAGCTGAAATGGCATTTGTTTTTCACACC...CTCTAGGTCAGCCCTGCTGGGCCCTTGAGAGGGGCTCTGTGGCTGCAGAGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR CCA 90 bp | TCCTATGGTCCCAAGGCTGTGGTTCTCTCTGTGCATGTCCGTCCTTGTCCCCCGTTTCAGCTTTGCTCCTaGTGGCTGAAGTGGACTTTC | + |
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Preference number: 2 (lower is better) Translates to: SYGPKAVVLSVHVRPCPPFQLCS*WLKWTF Trigger: GAAAGTCCACTTCAGCCACCAGGAGCAAAGCTGAAA...CGGGGGACAAGGACGGACATGCACAGAGAGAACCACAGCCTTGGGACCATAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR CCA 90 bp | GGGCAAATATTTACTGAGCACTGGCGGTGTGCTGGAACCTGGTCCAGACATCTGTGTTGCTTGGGAGGCTaGGGAAAGCAGCAGAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: GQIFTEHWRCAGTWSRHLCCLGG*GKQQRD Trigger: GTCTCTCTGCTGCTTTCCCCAGCCTCCCAAGCAACA...CAGATGTCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGTAAATATTTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| 3UTR-3UTR TCA 90 bp | ATCATGAATCCTATGGTCCCAAGGCTGTGGTTCTCTCTGTGCATGTCCGTCCTTGTACCAGCAGAGTTCTaGGTCACCCACTGTCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: IMNPMVPRLWFSLCMSVLVPAEF*VTHCPH Trigger: GTGGGGACAGTGGGTGACTCAGAACTCTGCTGGTAC...AAGGACGGACATGCACAGAGAGAACCACAGCCTTGGGACCATAGGATTCATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR GCA 90 bp | TACATGGGGCAAATATTTACTGAGCACTGGCGGTGTGCTGGAACCTGGTCCAGATCCCCCATAGTGTGTTaGTTGGGAGGCTGGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: YMGQIFTEHWRCAGTWSRSPIVC*LGGWGK Trigger: CTTTCCCCAGCCTCCCAAGCAACACACTATGGGGGA...TCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGTAAATATTTGCCCCATGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| 3UTR-3UTR CCA 90 bp | TTGGGTAGATGTGTGAGCTGGAGTTTCTTGACACCCCCTCTCCCCCATAGTGTGAGCCTCTCCTGTCTCTaGTCCAGAGACCTAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LGRCVSWSFLTPPLPHSVSLSCL*SRDLKP Trigger: TGGCTTTAGGTCTCTGGACCAGAGACAGGAGAGGCT...CACACTATGGGGGAGAGGGGGTGTCAAGAAACTCCAGCTCACACATCTACCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGAAGCTGATTCAGTCCTACGTTGTCACCTCTCGCTGAGGGCCCCCTCCACGCATCTACAAGGGAGATaGTTAAAAAGAGAGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: AEADSVLRCHLSLRAPSTHLQGR*LKREGR Trigger: TCTGCCCTCTCTTTTTAACCATCTCCCTTGTAGATG...CGTGGAGGGGGCCCTCAGCGAGAGGTGACAACGTAGGACTGAATCAGCTTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR CAA 90 bp | GCAGACAGTGAGCCGGTGGCTCCAGGAAACCACTGGAGGATGTCCTaGCTTGCTGCCTCCTATCAGATTACAGGAAAGAATTGCTTGATC | + |
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Preference number: 2 (lower is better) Translates to: ADSEPVAPGNHWRMS*LAASYQITGKNCLI Trigger: GATCAAGCAATTCTTTCCTGTAATCTGATAGGAGGCAGCAAGCAAGGACATCCTCCAGTGGTTTCCTGGAGCCACCGGCTCACTGTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR CAA 90 bp | AGAATCGAGCCTGCTGCGAACAACTGTAACATCTGGCCTAGAGCTTaGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGACCTAAAG | + |
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Preference number: 2 (lower is better) Translates to: RIEPAANNCNIWPRA*ESQSLSCLWSRDLK Trigger: CTTTAGGTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGATGTTACAGTTGTTCGCAGCAGGCTCGATTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR GCA 90 bp | ATCTGGCCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGACGAGGATGTCCTTGCTTaGTGCCTCCTATCAGATTAC | + |
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Preference number: 2 (lower is better) Translates to: IWPRALESQSLSCLWSRDEDVLA*CLLSDY Trigger: GTAATCTGATAGGAGGCAGCAAGCAAGGACATCCTC...GTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR CCA 90 bp | ATCATGAATCCTATGGTCCCAAGGCTGTGGTTCTCTCTGTGCATGTCCGTCCTTTGTTGCTTGGGAGGCTaGGGAAAGCAGCAGAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: IMNPMVPRLWFSLCMSVLCCLGG*GKQQRD Trigger: GTCTCTCTGCTGCTTTCCCCAGCCTCCCAAGCAACA...AAGGACGGACATGCACAGAGAGAACCACAGCCTTGGGACCATAGGATTCATGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR CCA 90 bp | ATCATGAATCCTATGGTCCCAAGGCTGTGGTTCTCTCTGTGCATGTCCGTCCTTCACTTGTGCTATCCCTaGGATGTCCTCCCTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: IMNPMVPRLWFSLCMSVLHLCYP*DVLPLE Trigger: CTCCAGAGGGAGGACATCCCAGGGATAGCACAAGTG...AAGGACGGACATGCACAGAGAGAACCACAGCCTTGGGACCATAGGATTCATGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGTGTCTCCATCTGCACAATGTTACAATGCTACAGCGTACTTCTGGCCTACAGCTTTGCTCCTGGTaGCTGAAGTGGACTTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: VGCLHLHNVTMLQRTSGLQLCSW*LKWTFL Trigger: CAGGAAAGTCCACTTCAGCCACCAGGAGCAAAGCTG...TAGGCCAGAAGTACGCTGTAGCATTGTAACATTGTGCAGATGGAGACACCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGGTAGATGTGTGAGCTGGAGTTTCTTGACACCCCCTCTCCCCCATAGTGTGTTTCAGCTTTGCTCCTaGTGGCTGAAGTGGACTTTC | + |
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Preference number: 2 (lower is better) Translates to: LGRCVSWSFLTPPLPHSVFQLCS*WLKWTF Trigger: GAAAGTCCACTTCAGCCACCAGGAGCAAAGCTGAAA...CACACTATGGGGGAGAGGGGGTGTCAAGAAACTCCAGCTCACACATCTACCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGGAAAATACTCTGACTCACTTGTGCTATCCCTGGGATGTCCTCCCTCTGCAGGAAAGAATTGCTTaGTCAGCTTGGAGGCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: LWENTLTHLCYPWDVLPLQERIA*SAWRLL Trigger: TAGGAGCCTCCAAGCTGATCAAGCAATTCTTTCCTG...CAGAGGGAGGACATCCCAGGGATAGCACAAGTGAGTCAGAGTATTTTCCCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR TCA 90 bp | GGGCAAATATTTACTGAGCACTGGCGGTGTGCTGGAACCTGGTCCAGACATCTGCAGAGACCAGCTTGGTaGAAAAAGCTTGTTCTACAG | + |
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Preference number: 2 (lower is better) Translates to: GQIFTEHWRCAGTWSRHLQRPAW*KKLVLQ Trigger: CTGTAGAACAAGCTTTTTTCACCAAGCTGGTCTCTG...CAGATGTCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGTAAATATTTGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGACAAACCCAGTTGTCAGGGTAAAAACAGCTCTGCAGCCACAGAGCCCCATTACAGGAAAGAATTaGTTGATCAGCTTGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: GRTNPVVRVKTALQPQSPITGKN*LISLEA Trigger: AGCCTCCAAGCTGATCAAGCAATTCTTTCCTGTAAT...GGGGCTCTGTGGCTGCAGAGCTGTTTTTACCCTGACAACTGGGTTTGTCCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR GCA 90 bp | TGGTCCAGAGACCTAAAGCCAATGGCAGCCGTGACTATCGATACCCCTGACCCCATTACAGGAAAGAATTaGTTGATCAGCTTGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: WSRDLKPMAAVTIDTPDPITGKN*LISLEA Trigger: AGCCTCCAAGCTGATCAAGCAATTCTTTCCTGTAAT...GGGGTCAGGGGTATCGATAGTCACGGCTGCCATTGGCTTTAGGTCTCTGGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR-3UTR CCA 90 bp | TACATGGGGCAAATATTTACTGAGCACTGGCGGTGTGCTGGAACCTGGTCCAGACATCTACAAGGGAGATaGTTAAAAAGAGAGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: YMGQIFTEHWRCAGTWSRHLQGR*LKREGR Trigger: TCTGCCCTCTCTTTTTAACCATCTCCCTTGTAGATG...TCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGTAAATATTTGCCCCATGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| 3UTR-3UTR CCA 90 bp | TTGCGTCAGGGAGCAAGAGAATGGCTTTTGTTGTTTATACTGTCCAGGATGGGCTGCAGGAAGGGAAGTTaGAGGTCAGATTTGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LRQGAREWLLLFILSRMGCRKGS*RSDLQK Trigger: CTTCTGCAAATCTGACCTCCAACTTCCCTTCCTGCA...GCCCATCCTGGACAGTATAAACAACAAAAGCCATTCTCTTGCTCCCTGACGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| 3UTR-3UTR TCA 90 bp | TACATGGGGCAAATATTTACTGAGCACTGGCGGTGTGCTGGAACCTGGTCCAGATTTTTCTCTCACCCTTaGAGATCATGGCTTTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: YMGQIFTEHWRCAGTWSRFFSHP*RSWLLQ Trigger: TTGCAAAAGCCATGATCTTCAAGGGTGAGAGAAAAA...TCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGTAAATATTTGCCCCATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| 3UTR-3UTR GCA 90 bp | TGGGAAAATACTCTGACTCACTTGTGCTATCCCTGGGATGTCCTCCCTCTGGAGGGTGTGAAAAACAAATaGCATTTCAGCTTTGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: WENTLTHLCYPWDVLPLEGVKNK*HFSFAP Trigger: AGGAGCAAAGCTGAAATGGCATTTGTTTTTCACACC...CTCCAGAGGGAGGACATCCCAGGGATAGCACAAGTGAGTCAGAGTATTTTCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR CAA 90 bp | AAAGGCCAAGAGTCTTCATATCCAGTATTGACCAACATTCTTTATTaGCGCGCATTTTTGATCAGCAGTATCAGAAATCATGAATCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: KGQESSYPVLTNILY*RAFLISSIRNHESY Trigger: ATAGGATTCATGATTTCTGATACTGCTGATCAAAAATGCGCGCAAATAAAGAATGTTGGTCAATACTGGATATGAAGACTCTTGGCCTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAAGCTGATTCAGTCCTACGTTGTCACCTCTCGCTGAGGGCCCCCTCCACGCACTGGAGGATGTCCTaGCTTGCTGCCTCCTATCAG | + |
|
Preference number: 3 (lower is better) Translates to: AEADSVLRCHLSLRAPSTHWRMS*LAASYQ Trigger: CTGATAGGAGGCAGCAAGCAAGGACATCCTCCAGTG...CGTGGAGGGGGCCCTCAGCGAGAGGTGACAACGTAGGACTGAATCAGCTTCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCTATGGTCCCAAGGCTGTGGTTCTCTCTGTGCATGTCCGTCCTTGTCCCCCGCCCATAGTGTGTTGCTaGGGAGGCTGGGGAAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SYGPKAVVLSVHVRPCPPPIVCC*GGWGKQ Trigger: CTGCTTTCCCCAGCCTCCCAAGCAACACACTATGGG...CGGGGGACAAGGACGGACATGCACAGAGAGAACCACAGCCTTGGGACCATAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCTCTGGAGGAAGTGATAGCTCCACCCCCAGGTACCAGCAGAGTTCTGAGCCCATAGTGTGTTGCTaGGGAGGCTGGGGAAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PPSGGSDSSTPRYQQSSEPIVCC*GGWGKQ Trigger: CTGCTTTCCCCAGCCTCCCAAGCAACACACTATGGG...CTCAGAACTCTGCTGGTACCTGGGGGTGGAGCTATCACTTCCTCCAGAGGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAGACAGTGAGCCGGTGGCTCCAGGAAACCACTGGAGGATGTCCTTGCTTGAATTGCTTGATCAGCTaGGAGGCTCCTAGCAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LQTVSRWLQETTGGCPCLNCLIS*EAPSSK Trigger: CTTGCTGCTAGGAGCCTCCAAGCTGATCAAGCAATT...CAAGCAAGGACATCCTCCAGTGGTTTCCTGGAGCCACCGGCTCACTGTCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR GCA 72 bp | ATGAATCCTATGGTCCCAAGGCTGTGGTTCTCTCTGTaGATGTCCGTCCTTGTCCCCCGAGGGATATCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: MNPMVPRLWFSL*MSVLVPRGISP Trigger: TGGGGATATCCCTCGGGGGACAAGGACGGACATGCACAGAGAGAACCACAGCCTTGGGACCATAGGATTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR CCA 72 bp | CAAATGCCATTTCAGCTTTGCTCCTGGTGGCTGAAGTaGACTTTCCTGCACCCTGGCCAGAGACCAGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: QMPFQLCSWWLK*TFLHPGQRPAW Trigger: CCAAGCTGGTCTCTGGCCAGGGTGCAGGAAAGTCCACTTCAGCCACCAGGAGCAAAGCTGAAATGGCATTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR CCA 72 bp | CCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTaGTCCAGAGACCTAAAGCCAATGGCAGCCGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: PRALESQSLSCL*SRDLKPMAAVT Trigger: AGTCACGGCTGCCATTGGCTTTAGGTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR TCA 72 bp | AATTGCTTGATCAGCTTGGAGGCTCCTAGCAGCAAGTaGCAGCAACAGCCTTCTGGAGAAGAAGGCCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: NCLISLEAPSSK*QQQPSGEEGPA Trigger: GGCTGGGCCTTCTTCTCCAGAAGGCTGTTGCTGTCACTTGCTGCTAGGAGCCTCCAAGCTGATCAAGCAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR CCA 72 bp | CTGCTGCGAACAACTGTAACATCTGGCCTAGAGCTTTaGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLRTTVTSGLEL*SRKASPVSGPE Trigger: CTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGATGTTACAGTTGTTCGCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGACCTAAAGAATGCCATTTCAGCTTaGCTCCTGGTGGCTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PRALESQSLSCLWSRDLKNAISA*LLVAEV Trigger: CACTTCAGCCACCAGGAGCAAAGCTGAAATGGCATT...CTTTAGGTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAGAGGCTTTTAACAGGAATAAGGACAGCAACTGTCTGCTTCCTGGCTTCACTCCCCCATAGTGTGTaGCTTGGGAGGCTGGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: CQRLLTGIRTATVCFLASLPHSV*LGRLGK Trigger: TTTCCCCAGCCTCCCAAGCAACACACTATGGGGGAG...TGAAGCCAGGAAGCAGACAGTTGCTGTCCTTATTCCTGTTAAAAGCCTCTGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR-3UTR CAA 90 bp | TACATGGGGCAAATATTTACTGAGCACTGGCGGTGTGCTGGAACCTGGTCCAGAAATTGCTTGATCAGCTaGGAGGCTCCTAGCAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: YMGQIFTEHWRCAGTWSRNCLIS*EAPSSK Trigger: CTTGCTGCTAGGAGCCTCCAAGCTGATCAAGCAATT...TCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGTAAATATTTGCCCCATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
||
| 3UTR TCA 72 bp | AAAAACAAATGCCATTTCAGCTTTGCTCCTGGTGGCTaGAGTGGACTTTCCTGCACCCTGGCCAGAGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: KNKCHFSFAPGG*SGLSCTLARDQ Trigger: CTGGTCTCTGGCCAGGGTGCAGGAAAGTCCACTTCAGCCACCAGGAGCAAAGCTGAAATGGCATTTGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR GCA 72 bp | GACCCCAGGTGTGAAAAACAAATGCCATTTCAGCTTTaGTCCTGGTGGCTGAAGTGGACTTTCCTGCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: DPRCEKQMPFQL*SWWLKWTFLHP Trigger: AGGGTGCAGGAAAGTCCACTTCAGCCACCAGGAGCAAAGCTGAAATGGCATTTGTTTTTCACACCTGGGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR GCA 72 bp | GGAGACAGTGCAGGAAGGGAAGTTGGAGGTCAGATTTaGAGAAGTCCTGACCAGGAATCTGGGGTTTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: GDSAGREVGGQI*RSPDQESGVSF Trigger: GAATGAAACCCCAGATTCCTGGTCAGGACTTCTGCAAATCTGACCTCCAACTTCCCTTCCTGCACTGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
||
| 3UTR GCA 72 bp | TGGCGGTGTGCTGGAACCTGGTCCAGACATCTGAGTTaGGTCAGGGAGCAAGAGAATGGCTTTTGTTGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: WRCAGTWSRHLS*VREQENGFCCL Trigger: TAAACAACAAAAGCCATTCTCTTGCTCCCTGACGCAACTCAGATGTCTGGACCAGGTTCCAGCACACCGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
||
| 3UTR CCA 72 bp | AGGTGTGAAAAACAAATGCCATTTCAGCTTTGCTCCTaGTGGCTGAAGTGGACTTTCCTGCACCCTGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RCEKQMPFQLCS*WLKWTFLHPGQ Trigger: CTGGCCAGGGTGCAGGAAAGTCCACTTCAGCCACCAGGAGCAAAGCTGAAATGGCATTTGTTTTTCACACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR CCA 72 bp | GTATCAGAAATCATGAATCCTATGGTCCCAAGGCTGTaGTTCTCTCTGTGCATGTCCGTCCTTGTCCCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: VSEIMNPMVPRL*FSLCMSVLVPR Trigger: TCGGGGGACAAGGACGGACATGCACAGAGAGAACCACAGCCTTGGGACCATAGGATTCATGATTTCTGATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR GCA 72 bp | GGTGGCTCCAGGAAACCACTGGAGGATGTCCTTGCTTaGTGCCTCCTATCAGATTACAGGAAAGAATTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GGSRKPLEDVLA*CLLSDYRKELL Trigger: AAGCAATTCTTTCCTGTAATCTGATAGGAGGCAGCAAGCAAGGACATCCTCCAGTGGTTTCCTGGAGCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR GCA 72 bp | CAGAGGCTTTTAACAGGAATAAGGACAGCAACTGTCTaGTTCCTGGCTTCAGCCTCTAGTGGAAGGCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: QRLLTGIRTATV*FLASASSGRLS Trigger: AGACAGCCTTCCACTAGAGGCTGAAGCCAGGAAGCAGACAGTTGCTGTCCTTATTCCTGTTAAAAGCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR CCA 72 bp | CAAGAGAATGGCTTTTGTTGTTTATACTGTCCAGGATaGGCTGAGGGATACACACCACAGCCCTCTGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QENGFCCLYCPG*AEGYTPQPSES Trigger: GCTCTCAGAGGGCTGTGGTGTGTATCCCTCAGCCCATCCTGGACAGTATAAACAACAAAAGCCATTCTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
||
| 3UTR GCA 72 bp | GGCTCCAGGAAACCACTGGAGGATGTCCTTGCTTGCTaGCTCCTATCAGATTACAGGAAAGAATTGCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: GSRKPLEDVLAC*LLSDYRKELLD Trigger: ATCAAGCAATTCTTTCCTGTAATCTGATAGGAGGCAGCAAGCAAGGACATCCTCCAGTGGTTTCCTGGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGGTGTCTCCATCTGCACAATGTTACAATGCTACAGCGTACTTCTGGCCTAGATTACAGGAAAGAATaGCTTGATCAGCTTGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VGCLHLHNVTMLQRTSGLDYRKE*LDQLGG Trigger: GCCTCCAAGCTGATCAAGCAATTCTTTCCTGTAATC...TAGGCCAGAAGTACGCTGTAGCATTGTAACATTGTGCAGATGGAGACACCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAGAGGCTTTTAACAGGAATAAGGACAGCAACTGTCTGCTTCCTGGCTTCAGATTACAGGAAAGAATaGCTTGATCAGCTTGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: CQRLLTGIRTATVCFLASDYRKE*LDQLGG Trigger: GCCTCCAAGCTGATCAAGCAATTCTTTCCTGTAATC...TGAAGCCAGGAAGCAGACAGTTGCTGTCCTTATTCCTGTTAAAAGCCTCTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGATCAGCAGTATCAGAAATCATGAATCCTATGGTCCCAAGGCTGTGGTTCTCAATACTCTGACTCACTaGTGCTATCCCTGGGATGTC | + |
|
Preference number: 3 (lower is better) Translates to: LISSIRNHESYGPKAVVLNTLTH*CYPWDV Trigger: GACATCCCAGGGATAGCACAAGTGAGTCAGAGTATT...GAGAACCACAGCCTTGGGACCATAGGATTCATGATTTCTGATACTGCTGATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTGATCAGCAGTATCAGAAATCATGAATCCTATGGTCCCAAGGCTGTGGTTAATGCCATTTCAGCTTaGCTCCTGGTGGCTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: FLISSIRNHESYGPKAVVNAISA*LLVAEV Trigger: CACTTCAGCCACCAGGAGCAAAGCTGAAATGGCATT...AACCACAGCCTTGGGACCATAGGATTCATGATTTCTGATACTGCTGATCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR TCA 72 bp | TTTGCGCGCATTTTTGATCAGCAGTATCAGAAATCATaGATCCTATGGTCCCAAGGCTGTGGTTCTCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FARIFDQQYQKS*ILWSQGCGSLC Trigger: ACAGAGAGAACCACAGCCTTGGGACCATAGGATTCATGATTTCTGATACTGCTGATCAAAAATGCGCGCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR TCA 72 bp | AGGTCTCCGCTGACCTTCAGATTTTTCTCTCACCCTTaGAGATCATGGCTTTTGCAAATAAGACTTATTGAC | + |
|
Preference number: 3 (lower is better) Translates to: RSPLTFRFFSHP*RSWLLQIRLID Trigger: GTCAATAAGTCTTATTTGCAAAAGCCATGATCTTCAAGGGTGAGAGAAAAATCTGAAGGTCAGCGGAGACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR TCA 90 bp | CCTCCCTCTGGAGGAAGTGATAGCTCCACCCCCAGGTACCAGCAGAGTTCTGAGGCTGGCCGAGCAGGATaGGGTTGGGGGCGGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PPSGGSDSSTPRYQQSSEAGRAG*GWGRCP Trigger: CGGGCACCGCCCCCAACCTCATCCTGCTCGGCCAGC...CTCAGAACTCTGCTGGTACCTGGGGGTGGAGCTATCACTTCCTCCAGAGGGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR TCA 90 bp | ACATCTGGCCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGGCTGGCCGAGCAGGATaGGGTTGGGGGCGGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TSGLELWSRKASPVSGPEAGRAG*GWGRCP Trigger: CGGGCACCGCCCCCAACCTCATCCTGCTCGGCCAGC...CTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGATGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR TCA 90 bp | CTGCAGACAGTGAGCCGGTGGCTCCAGGAAACCACTGGAGGATGTCCTTGCTTGCCATCATCCCCAGGATaGGCCTTGCAGGCTGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: LQTVSRWLQETTGGCPCLPSSPG*ALQAGP Trigger: GGGTCCAGCCTGCAAGGCTCATCCTGGGGATGATGG...CAAGCAAGGACATCCTCCAGTGGTTTCCTGGAGCCACCGGCTCACTGTCTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR TCA 90 bp | GAGAAGGTGCTGCAGACAGTGAGCCGGTGGCTCCAGGAAACCACTGGAGGATGTCCATCATCCCCAGGATaGGCCTTGCAGGCTGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: EKVLQTVSRWLQETTGGCPSSPG*ALQAGP Trigger: GGGTCCAGCCTGCAAGGCTCATCCTGGGGATGATGG...ACATCCTCCAGTGGTTTCCTGGAGCCACCGGCTCACTGTCTGCAGCACCTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTCTGGAGGAAGTGATAGCTCCACCCCCAGGTACCAGCAGAGTTCTGAGGGCATCGGCCTTCCTTaGGCGGCAGGGCGAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPSGGSDSSTPRYQQSSEGIGLP*AAGRRE Trigger: TTCTCTTCGCCCTGCCGCCCAAGGAAGGCCGATGCC...CTCAGAACTCTGCTGGTACCTGGGGGTGGAGCTATCACTTCCTCCAGAGGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | ACAGCTCTGCAGCCACAGAGCCCCTCTCAAGGGCCCAGCAGGGCTGACCTAGAGGGTGTTCCTCCTCCTTaGAGTCATCAGGCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TALQPQSPSQGPSRADLEGVPPP*SHQAAP Trigger: TGGAGCTGCCTGATGACTCCAAGGAGGAGGAACACC...CTCTAGGTCAGCCCTGCTGGGCCCTTGAGAGGGGCTCTGTGGCTGCAGAGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGGACAAACCCAGTTGTCAGGGTAAAAACAGCTCTGCAGCCACAGAGCCCCCAGCACTGCCAGCAGTaGGGGGACATGCTCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRTNPVVRVKTALQPQSPQHCQQ*GDMLQG Trigger: CCCCTGGAGCATGTCCCCCCACTGCTGGCAGTGCTG...GGGGCTCTGTGGCTGCAGAGCTGTTTTTACCCTGACAACTGGGTTTGTCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTCTGGAGGAAGTGATAGCTCCACCCCCAGGTACCAGCAGAGTTCTGAGGCACATGCAGTCGGATaGCCAGCTCTGCCAGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSGGSDSSTPRYQQSSEAHAVG*PALPGR Trigger: CCGTCCTGGCAGAGCTGGCCATCCGACTGCATGTGC...CTCAGAACTCTGCTGGTACCTGGGGGTGGAGCTATCACTTCCTCCAGAGGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR TCA 90 bp | CCTCCCTCTGGAGGAAGTGATAGCTCCACCCCCAGGTACCAGCAGAGTTCTGAGCAGAAGAGCTGTCACTaGCAGGGGCAGGGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPSGGSDSSTPRYQQSSEQKSCH*QGQGLC Trigger: ACAGAGGCCCTGCCCCTGTCAGTGACAGCTCTTCTG...CTCAGAACTCTGCTGGTACCTGGGGGTGGAGCTATCACTTCCTCCAGAGGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR GCA 90 bp | AAAACAGCTCTGCAGCCACAGAGCCCCTCTCAAGGGCCCAGCAGGGCTGACCTAAGGAGCAGCCGACCGTaGCTGGGATCATCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: KTALQPQSPSQGPSRADLRSSRP*LGSSGT Trigger: TGTACCTGATGATCCCAGGCACGGTCGGCTGCTCCT...TAGGTCAGCCCTGCTGGGCCCTTGAGAGGGGCTCTGTGGCTGCAGAGCTGTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | AAAACAGCTCTGCAGCCACAGAGCCCCTCTCAAGGGCCCAGCAGGGCTGACCTAGTGTCGAGGAAGTACTaGGGGCAGACCTTGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KTALQPQSPSQGPSRADLVSRKY*GQTLLE Trigger: CTCCAGCAAGGTCTGCCCCCAGTACTTCCTCGACAC...TAGGTCAGCCCTGCTGGGCCCTTGAGAGGGGCTCTGTGGCTGCAGAGCTGTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | GCTTCCTGGCTTCAGCCTCTAGTGGAAGGCTGTCTTGGGTGGGGTGGGGTAGAGATGGGCCCCAGGTTCTaGAACTCCTCCTGGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: ASWLQPLVEGCLGWGGVEMGPRF*NSSWIT Trigger: GGTGATCCAGGAGGAGTTCCAGAACCTGGGGCCCAT...CTCTACCCCACCCCACCCAAGACAGCCTTCCACTAGAGGCTGAAGCCAGGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGTGCTGCAGACAGTGAGCCGGTGGCTCCAGGAAACCACTGGAGGATGTCAGGGCACTGTCTCCTaGGCCTTCTTCCAGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EKVLQTVSRWLQETTGGCQGTVS*AFFQLS Trigger: GCTGAGCTGGAAGAAGGCCCAGGAGACAGTGCCCTG...ACATCCTCCAGTGGTTTCCTGGAGCCACCGGCTCACTGTCTGCAGCACCTTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR TCA 90 bp | GAGAAGGTGCTGCAGACAGTGAGCCGGTGGCTCCAGGAAACCACTGGAGGATGTGGCCAAAGAGGCTCTTaGGGATGGCACTGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: EKVLQTVSRWLQETTGGCGQRGS*GWHWQW Trigger: CCATTGCCAGTGCCATCCTCAAGAGCCTCTTTGGCC...ACATCCTCCAGTGGTTTCCTGGAGCCACCGGCTCACTGTCTGCAGCACCTTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR GCA 90 bp | TCCTATGGTCCCAAGGCTGTGGTTCTCTCTGTGCATGTCCGTCCTTGTCCCCCGACATGCTCCAGGGGGTaGAGCTGTCCACCGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SYGPKAVVLSVHVRPCPPTCSRG*SCPPIH Trigger: ATGGATCGGTGGACAGCTGCACCCCCTGGAGCATGT...CGGGGGACAAGGACGGACATGCACAGAGAGAACCACAGCCTTGGGACCATAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR GCA 90 bp | CTGCAGACAGTGAGCCGGTGGCTCCAGGAAACCACTGGAGGATGTCCTTGCTTGAGGAGCAGCCGACCGTaGCTGGGATCATCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LQTVSRWLQETTGGCPCLRSSRP*LGSSGT Trigger: TGTACCTGATGATCCCAGGCACGGTCGGCTGCTCCT...CAAGCAAGGACATCCTCCAGTGGTTTCCTGGAGCCACCGGCTCACTGTCTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | ACATCTGGCCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGGGCATCGGCCTTCCTTaGGCGGCAGGGCGAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSGLELWSRKASPVSGPEGIGLP*AAGRRE Trigger: TTCTCTTCGCCCTGCCGCCCAAGGAAGGCCGATGCC...CTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTCTGGAGGAAGTGATAGCTCCACCCCCAGGTACCAGCAGAGTTCTGAGGTAGCATCATTGCGGTaGAGGCCGTGTTGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPSGGSDSSTPRYQQSSEVASLR*RPCCSA Trigger: GGCTGAGCAACACGGCCTCCACCGCAATGATGCTAC...CTCAGAACTCTGCTGGTACCTGGGGGTGGAGCTATCACTTCCTCCAGAGGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | CCTCCCTCTGGAGGAAGTGATAGCTCCACCCCCAGGTACCAGCAGAGTTCTGAGATGGGCCCCAGGTTCTaGAACTCCTCCTGGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: PPSGGSDSSTPRYQQSSEMGPRF*NSSWIT Trigger: GGTGATCCAGGAGGAGTTCCAGAACCTGGGGCCCAT...CTCAGAACTCTGCTGGTACCTGGGGGTGGAGCTATCACTTCCTCCAGAGGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | CCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGACCTAAAGCAGCACTGCCAGCAGTaGGGGGACATGCTCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRALESQSLSCLWSRDLKQHCQQ*GDMLQG Trigger: CCCCTGGAGCATGTCCCCCCACTGCTGGCAGTGCTG...CTTTAGGTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | GCTGAAGCTGATTCAGTCCTACGTTGTCACCTCTCGCTGAGGGCCCCCTCCACGTGCCCAGCTGGAAGATaGTCTGTGCCCAGGTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AEADSVLRCHLSLRAPSTCPAGR*SVPRCS Trigger: TGAACACCTGGGCACAGACCATCTTCCAGCTGGGCA...CGTGGAGGGGGCCCTCAGCGAGAGGTGACAACGTAGGACTGAATCAGCTTCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGGACAAACCCAGTTGTCAGGGTAAAAACAGCTCTGCAGCCACAGAGCCCCGGGAAGGTGCCCAGCTaGAAGATGGTCTGTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRTNPVVRVKTALQPQSPGKVPS*KMVCAQ Trigger: CTGGGCACAGACCATCTTCCAGCTGGGCACCTTCCC...GGGGCTCTGTGGCTGCAGAGCTGTTTTTACCCTGACAACTGGGTTTGTCCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR TCA 90 bp | ATCTGGCCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGACGGAGTTTGGGGGTGTTaGGACCGGCAGCATGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IWPRALESQSLSCLWSRDGVWGC*DRQHEG Trigger: GCCTTCATGCTGCCGGTCTCAACACCCCCAAACTCC...GTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR TCA 90 bp | GGGAGGACAAACCCAGTTGTCAGGGTAAAAACAGCTCTGCAGCCACAGAGCCCCTGTTCATGGCCAGGCTaGGCAGCAGGACACCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GRTNPVVRVKTALQPQSPCSWPG*AAGHPS Trigger: TGATGGGTGTCCTGCTGCTCAGCCTGGCCATGAACA...GGGGCTCTGTGGCTGCAGAGCTGTTTTTACCCTGACAACTGGGTTTGTCCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR GCA 90 bp | CCTCCCTCTGGAGGAAGTGATAGCTCCACCCCCAGGTACCAGCAGAGTTCTGAGTGGCAGTGCCCCCAATaGTGGCAGAGTAAGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSGGSDSSTPRYQQSSEWQCPQ*WQSKEW Trigger: CCATTCCTTACTCTGCCAGCATTGGGGGCACTGCCA...CTCAGAACTCTGCTGGTACCTGGGGGTGGAGCTATCACTTCCTCCAGAGGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR GCA 90 bp | TGGTCCAGAGACCTAAAGCCAATGGCAGCCGTGACTATCGATACCCCTGACCCCACATGCTCCAGGGGGTaGAGCTGTCCACCGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WSRDLKPMAAVTIDTPDPTCSRG*SCPPIH Trigger: ATGGATCGGTGGACAGCTGCACCCCCTGGAGCATGT...GGGGTCAGGGGTATCGATAGTCACGGCTGCCATTGGCTTTAGGTCTCTGGACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | CCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGACCTAAAGGCAGGGCGAAGAGAATaGGCAGCAGAGCCAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRALESQSLSCLWSRDLKAGRRE*AAEPAA Trigger: TGCCGCTGGCTCTGCTGCCCATTCTCTTCGCCCTGC...CTTTAGGTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR TCA 90 bp | TTGGGTAGATGTGTGAGCTGGAGTTTCTTGACACCCCCTCTCCCCCATAGTGTGCAGAAGAGCTGTCACTaGCAGGGGCAGGGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGRCVSWSFLTPPLPHSVQKSCH*QGQGLC Trigger: ACAGAGGCCCTGCCCCTGTCAGTGACAGCTCTTCTG...CACACTATGGGGGAGAGGGGGTGTCAAGAAACTCCAGCTCACACATCTACCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR TCA 90 bp | CTGCAGACAGTGAGCCGGTGGCTCCAGGAAACCACTGGAGGATGTCCTTGCTTGAAACCACCACTTGAGTaGGGGCTTCTGGGAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQTVSRWLQETTGGCPCLKPPLE*GLLGRE Trigger: TTCCCTTCCCAGAAGCCCTCACTCAAGTGGTGGTTT...CAAGCAAGGACATCCTCCAGTGGTTTCCTGGAGCCACCGGCTCACTGTCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR TCA 90 bp | CCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGACCTAAAGGGAGTTTGGGGGTGTTaGGACCGGCAGCATGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRALESQSLSCLWSRDLKGVWGC*DRQHEG Trigger: GCCTTCATGCTGCCGGTCTCAACACCCCCAAACTCC...CTTTAGGTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR GCA 90 bp | AAAACAGCTCTGCAGCCACAGAGCCCCTCTCAAGGGCCCAGCAGGGCTGACCTAGAACTGGCAAGAAACTaGATCTCCGTGGGCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KTALQPQSPSQGPSRADLELARN*ISVGTV Trigger: AACAGTGCCCACGGAGATGCAGTTTCTTGCCAGTTC...TAGGTCAGCCCTGCTGGGCCCTTGAGAGGGGCTCTGTGGCTGCAGAGCTGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR GCA 90 bp | TTGGGTAGATGTGTGAGCTGGAGTTTCTTGACACCCCCTCTCCCCCATAGTGTGTCGGATGGCCAGCTCTaGCAGGACGGGCAGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LGRCVSWSFLTPPLPHSVSDGQL*QDGQED Trigger: ATCTTCCTGCCCGTCCTGGCAGAGCTGGCCATCCGA...CACACTATGGGGGAGAGGGGGTGTCAAGAAACTCCAGCTCACACATCTACCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | TGGTCCAGAGACCTAAAGCCAATGGCAGCCGTGACTATCGATACCCCTGACCCCGGATGGCACTGGCAATaGGTAGCATCATTGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WSRDLKPMAAVTIDTPDPGWHWQ*VASLRW Trigger: CCACCGCAATGATGCTACCCATTGCCAGTGCCATCC...GGGGTCAGGGGTATCGATAGTCACGGCTGCCATTGGCTTTAGGTCTCTGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGGACAAACCCAGTTGTCAGGGTAAAAACAGCTCTGCAGCCACAGAGCCCCGGTGTTCCTCCTCCTTaGAGTCATCAGGCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRTNPVVRVKTALQPQSPGVPPP*SHQAAP Trigger: TGGAGCTGCCTGATGACTCCAAGGAGGAGGAACACC...GGGGCTCTGTGGCTGCAGAGCTGTTTTTACCCTGACAACTGGGTTTGTCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | GGGCAAATATTTACTGAGCACTGGCGGTGTGCTGGAACCTGGTCCAGACATCTGCAGGGCACTGTCTCCTaGGCCTTCTTCCAGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQIFTEHWRCAGTWSRHLQGTVS*AFFQLS Trigger: GCTGAGCTGGAAGAAGGCCCAGGAGACAGTGCCCTG...CAGATGTCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGTAAATATTTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
||
| CDS-3UTR TCA 90 bp | ATCTGGCCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGACTCTGCATCCTCAGTGTaGCCTCCTTCCGAACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IWPRALESQSLSCLWSRDSASSV*PPSELA Trigger: TGCCAGTTCGGAAGGAGGTCACACTGAGGATGCAGA...GTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR TCA 90 bp | CTCTGGGAAAATACTCTGACTCACTTGTGCTATCCCTGGGATGTCCTCCCTCTGTTGAGACCGGCAGCATaGAGGCGTAGGAGCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LWENTLTHLCYPWDVLPLLRPAA*RRRSSR Trigger: TCGGCTGCTCCTACGCCTTCATGCTGCCGGTCTCAA...CAGAGGGAGGACATCCCAGGGATAGCACAAGTGAGTCAGAGTATTTTCCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR GCA 90 bp | TACATGGGGCAAATATTTACTGAGCACTGGCGGTGTGCTGGAACCTGGTCCAGACTCCATCGGGGCCTCTaGATCCTCAGTGTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YMGQIFTEHWRCAGTWSRLHRGL*ILSVTS Trigger: GGAGGTCACACTGAGGATGCAGAGGCCCCGATGGAG...TCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGTAAATATTTGCCCCATGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
||
| CDS-3UTR GCA 90 bp | ATCTGGCCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGACTGGCAGTGCCCCCAATaGTGGCAGAGTAAGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: IWPRALESQSLSCLWSRDWQCPQ*WQSKEW Trigger: CCATTCCTTACTCTGCCAGCATTGGGGGCACTGCCA...GTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR GCA 90 bp | CTCTGGGAAAATACTCTGACTCACTTGTGCTATCCCTGGGATGTCCTCCCTCTGTCGGATGGCCAGCTCTaGCAGGACGGGCAGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LWENTLTHLCYPWDVLPLSDGQL*QDGQED Trigger: ATCTTCCTGCCCGTCCTGGCAGAGCTGGCCATCCGA...CAGAGGGAGGACATCCCAGGGATAGCACAAGTGAGTCAGAGTATTTTCCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | TTGATCAGCAGTATCAGAAATCATGAATCCTATGGTCCCAAGGCTGTGGTTCTCCGCTCCACACCTTCTTaGCCAGCGCCGCCAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LISSIRNHESYGPKAVVLRSTPS*PAPPAP Trigger: CGGCGCTGGCGGCGCTGGCCAAGAAGGTGTGGAGCG...GAGAACCACAGCCTTGGGACCATAGGATTCATGATTTCTGATACTGCTGATCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | CCACTTGGGGTGGGAGTAGGGAGGACAAACCCAGTTGTCAGGGTAAAAACAGCTGTAGCATCATTGCGGTaGAGGCCGTGTTGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLGVGVGRTNPVVRVKTAVASLR*RPCCSA Trigger: GGCTGAGCAACACGGCCTCCACCGCAATGATGCTAC...AGCTGTTTTTACCCTGACAACTGGGTTTGTCCTCCCTACTCCCACCCCAAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | TCCTATGGTCCCAAGGCTGTGGTTCTCTCTGTGCATGTCCGTCCTTGTCCCCCGCAGTGCCCCCAATGCTaGCAGAGTAAGGAATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SYGPKAVVLSVHVRPCPPQCPQC*QSKEWK Trigger: TTTCCATTCCTTACTCTGCCAGCATTGGGGGCACTG...CGGGGGACAAGGACGGACATGCACAGAGAGAACCACAGCCTTGGGACCATAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | CTGCAGACAGTGAGCCGGTGGCTCCAGGAAACCACTGGAGGATGTCCTTGCTTGGGGAGAAGAGGAGGATaGCAAACGTGCAGAACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQTVSRWLQETTGGCPCLGRRGG*QTCRTR Trigger: TCTTGTTCTGCACGTTTGCCATCCTCCTCTTCTCCC...CAAGCAAGGACATCCTCCAGTGGTTTCCTGGAGCCACCGGCTCACTGTCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | GTGGGGTGTCTCCATCTGCACAATGTTACAATGCTACAGCGTACTTCTGGCCTAGCACATGCAGTCGGATaGCCAGCTCTGCCAGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: VGCLHLHNVTMLQRTSGLAHAVG*PALPGR Trigger: CCGTCCTGGCAGAGCTGGCCATCCGACTGCATGTGC...TAGGCCAGAAGTACGCTGTAGCATTGTAACATTGTGCAGATGGAGACACCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR TCA 90 bp | TTGGGTAGATGTGTGAGCTGGAGTTTCTTGACACCCCCTCTCCCCCATAGTGTGTCTGCATCCTCAGTGTaGCCTCCTTCCGAACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGRCVSWSFLTPPLPHSVSASSV*PPSELA Trigger: TGCCAGTTCGGAAGGAGGTCACACTGAGGATGCAGA...CACACTATGGGGGAGAGGGGGTGTCAAGAAACTCCAGCTCACACATCTACCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR GCA 90 bp | CTCTGGGAAAATACTCTGACTCACTTGTGCTATCCCTGGGATGTCCTCCCTCTGCGCAGTCCATTTCCCTaGACAGCAGCTGTGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LWENTLTHLCYPWDVLPLRSPFP*TAAVLS Trigger: CGAGAGCACAGCTGCTGTGCAGGGAAATGGACTGCG...CAGAGGGAGGACATCCCAGGGATAGCACAAGTGAGTCAGAGTATTTTCCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR GCA 90 bp | TGGTCCAGAGACCTAAAGCCAATGGCAGCCGTGACTATCGATACCCCTGACCCCGAACTGGCAAGAAACTaGATCTCCGTGGGCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WSRDLKPMAAVTIDTPDPELARN*ISVGTV Trigger: AACAGTGCCCACGGAGATGCAGTTTCTTGCCAGTTC...GGGGTCAGGGGTATCGATAGTCACGGCTGCCATTGGCTTTAGGTCTCTGGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR CAA 72 bp | CCTGCTGCGAACAACTGTAACATCTGGCCTAGAGCTTaGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PAANNCNIWPRA*ESQSLSCLWSR Trigger: TCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGATGTTACAGTTGTTCGCAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR CAA 72 bp | CCAAGCATCTTGGGTAGATGTGTGAGCTGGAGTTTCTaGACACCCCCTCTCCCCCATAGTGTGTTGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSILGRCVSWSF*TPPLPHSVLLG Trigger: CCCAAGCAACACACTATGGGGGAGAGGGGGTGTCAAGAAACTCCAGCTCACACATCTACCCAAGATGCTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR TCA 90 bp | CCTCCCTCTGGAGGAAGTGATAGCTCCACCCCCAGGTACCAGCAGAGTTCTGAGAGTAAGGAATGGAAATaGGGAAGCCCTTCCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PPSGGSDSSTPRYQQSSESKEWK*GSPSRC Trigger: ACATCTGGAAGGGCTTCCTCATTTCCATTCCTTACT...CTCAGAACTCTGCTGGTACCTGGGGGTGGAGCTATCACTTCCTCCAGAGGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR TCA 90 bp | CCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGACCTAAAGAAACCACCACTTGAGTaGGGGCTTCTGGGAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRALESQSLSCLWSRDLKKPPLE*GLLGRE Trigger: TTCCCTTCCCAGAAGCCCTCACTCAAGTGGTGGTTT...CTTTAGGTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR GCA 90 bp | CTCTGGGAAAATACTCTGACTCACTTGTGCTATCCCTGGGATGTCCTCCCTCTGCTGGAAGATGGTCTGTaGCCAGGTGTTCATGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWENTLTHLCYPWDVLPLLEDGL*PGVHGQ Trigger: CTGGCCATGAACACCTGGGCACAGACCATCTTCCAG...CAGAGGGAGGACATCCCAGGGATAGCACAAGTGAGTCAGAGTATTTTCCCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | ATCTGGCCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGACCAGTGCCCCCAATGCTaGCAGAGTAAGGAATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IWPRALESQSLSCLWSRDQCPQC*QSKEWK Trigger: TTTCCATTCCTTACTCTGCCAGCATTGGGGGCACTG...GTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGAAAATACTCTGACTCACTTGTGCTATCCCTGGGATGTCCTCCCTCTGTGCCCAGCTGGAAGATaGTCTGTGCCCAGGTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWENTLTHLCYPWDVLPLCPAGR*SVPRCS Trigger: TGAACACCTGGGCACAGACCATCTTCCAGCTGGGCA...CAGAGGGAGGACATCCCAGGGATAGCACAAGTGAGTCAGAGTATTTTCCCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | TGCCAGAGGCTTTTAACAGGAATAAGGACAGCAACTGTCTGCTTCCTGGCTTCAGGGAAGGTGCCCAGCTaGAAGATGGTCTGTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CQRLLTGIRTATVCFLASGKVPS*KMVCAQ Trigger: CTGGGCACAGACCATCTTCCAGCTGGGCACCTTCCC...TGAAGCCAGGAAGCAGACAGTTGCTGTCCTTATTCCTGTTAAAAGCCTCTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR CAA 72 bp | CTGGCGGTGTGCTGGAACCTGGTCCAGACATCTGAGTaGCGTCAGGGAGCAAGAGAATGGCTTTTGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LAVCWNLVQTSE*RQGAREWLLLF Trigger: AAACAACAAAAGCCATTCTCTTGCTCCCTGACGCAACTCAGATGTCTGGACCAGGTTCCAGCACACCGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
||
| CDS-3UTR TCA 90 bp | TACATGGGGCAAATATTTACTGAGCACTGGCGGTGTGCTGGAACCTGGTCCAGAAGTCAAACCACCACTTaGGTGAGGGCTTCTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YMGQIFTEHWRCAGTWSRSQTTT*VRASGK Trigger: CTTCCCAGAAGCCCTCACTCAAGTGGTGGTTTGACT...TCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGTAAATATTTGCCCCATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
||
| CDS-3UTR TCA 90 bp | TGCCAGAGGCTTTTAACAGGAATAAGGACAGCAACTGTCTGCTTCCTGGCTTCATGTTCATGGCCAGGCTaGGCAGCAGGACACCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: CQRLLTGIRTATVCFLASCSWPG*AAGHPS Trigger: TGATGGGTGTCCTGCTGCTCAGCCTGGCCATGAACA...TGAAGCCAGGAAGCAGACAGTTGCTGTCCTTATTCCTGTTAAAAGCCTCTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGATGTCCTTGCTTGCTGCCTCCTATCAGATTACAGGAAAGAATTGCTTCAAGGCTGGTGGCAGTaGGGTGGCGTTAGCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LEDVLACCLLSDYRKELLQGWWQ*GGVSSM Trigger: CATGCTGCTAACGCCACCGCACTGCCACCAGCCTTG...AAGCAATTCTTTCCTGTAATCTGATAGGAGGCAGCAAGCAAGGACATCCTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR CCA 90 bp | ATCTCTAGTGGCCCGGATCATCTACAAGGGAGATGGTTAAAAAGAGAGGGCAGAGTGTCGAGGAAGTACTaGGGGCAGACCTTGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISSGPDHLQGRWLKREGRVSRKY*GQTLLE Trigger: CTCCAGCAAGGTCTGCCCCCAGTACTTCCTCGACAC...TCTGCCCTCTCTTTTTAACCATCTCCCTTGTAGATGATCCGGGCCACTAGAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR CCA 90 bp | TACATGGGGCAAATATTTACTGAGCACTGGCGGTGTGCTGGAACCTGGTCCAGAGAAACTGCATCTCCGTaGGCACTGTTCGCAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YMGQIFTEHWRCAGTWSRETASP*ALFAVH Trigger: ATGGACTGCGAACAGTGCCCACGGAGATGCAGTTTC...TCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGTAAATATTTGCCCCATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| CDS-3UTR CCA 90 bp | ATCTGGCCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGACCACCACATCACACTGTaGGAAGAAACTCTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IWPRALESQSLSCLWSRDHHITL*EETLEL Trigger: CAGCTCAAGAGTTTCTTCCCACAGTGTGATGTGGTG...GTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| CDS-3UTR CCA 90 bp | TGGGAAAATACTCTGACTCACTTGTGCTATCCCTGGGATGTCCTCCCTCTGGAGCAACTTCTCTTGAGCTaGCCGAGCAGGATGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WENTLTHLCYPWDVLPLEQLLLS*PSRMRL Trigger: CAACCTCATCCTGCTCGGCCAGCTCAAGAGAAGTTG...CTCCAGAGGGAGGACATCCCAGGGATAGCACAAGTGAGTCAGAGTATTTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109279.3 |
||
| CDS-3UTR TCA 90 bp | CTGGAGGATGTCCTTGCTTGCTGCCTCCTATCAGATTACAGGAAAGAATTGCTTGGCCAAAGAGGCTCTTaGGGATGGCACTGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LEDVLACCLLSDYRKELLGQRGS*GWHWQW Trigger: CCATTGCCAGTGCCATCCTCAAGAGCCTCTTTGGCC...AAGCAATTCTTTCCTGTAATCTGATAGGAGGCAGCAAGCAAGGACATCCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR GCA 90 bp | ACCACTGGAGGATGTCCTTGCTTGCTGCCTCCTATCAGATTACAGGAAAGAATTCGCAGTCCATTTCCCTaGACAGCAGCTGTGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TTGGCPCLLPPIRLQERIRSPFP*TAAVLS Trigger: CGAGAGCACAGCTGCTGTGCAGGGAAATGGACTGCG...AATTCTTTCCTGTAATCTGATAGGAGGCAGCAAGCAAGGACATCCTCCAGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | ATCATGAATCCTATGGTCCCAAGGCTGTGGTTCTCTCTGTGCATGTCCGTCCTTGAAACTGCATCTCCGTaGGCACTGTTCGCAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IMNPMVPRLWFSLCMSVLETASP*ALFAVH Trigger: ATGGACTGCGAACAGTGCCCACGGAGATGCAGTTTC...AAGGACGGACATGCACAGAGAGAACCACAGCCTTGGGACCATAGGATTCATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR CCA 90 bp | CCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGACCTAAAGTTTGAACTGTGTTGTTaGTCAAGGCTGGTGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRALESQSLSCLWSRDLKFELCC*SRLVAV Trigger: CACTGCCACCAGCCTTGACCAACAACACAGTTCAAA...CTTTAGGTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| 3UTR CAA 72 bp | CGGTGGCTCCAGGAAACCACTGGAGGATGTCCTTGCTaGCTGCCTCCTATCAGATTACAGGAAAGAATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RWLQETTGGCPC*LPPIRLQERIA Trigger: AGCAATTCTTTCCTGTAATCTGATAGGAGGCAGCAAGCAAGGACATCCTCCAGTGGTTTCCTGGAGCCACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR TCA 90 bp | TGCCAGAGGCTTTTAACAGGAATAAGGACAGCAACTGTCTGCTTCCTGGCTTCACCACATAGACAGGAATaGCGTGGTCACCATCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: CQRLLTGIRTATVCFLASPHRQE*RGHHHP Trigger: GGGATGATGGTGACCACGTCATTCCTGTCTATGTGG...TGAAGCCAGGAAGCAGACAGTTGCTGTCCTTATTCCTGTTAAAAGCCTCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR GCA 90 bp | ATCTCTAGTGGCCCGGATCATCTACAAGGGAGATGGTTAAAAAGAGAGGGCAGACCTTCCAGATGTTTCTaGGGTGTTCCTCCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISSGPDHLQGRWLKREGRPSRCF*GVPPPW Trigger: CCAAGGAGGAGGAACACCGCAGAAACATCTGGAAGG...TCTGCCCTCTCTTTTTAACCATCTCCCTTGTAGATGATCCGGGCCACTAGAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR GCA 90 bp | ACCACTGGAGGATGTCCTTGCTTGCTGCCTCCTATCAGATTACAGGAAAGAATTCTGGAAGATGGTCTGTaGCCAGGTGTTCATGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTGGCPCLLPPIRLQERILEDGL*PGVHGQ Trigger: CTGGCCATGAACACCTGGGCACAGACCATCTTCCAG...AATTCTTTCCTGTAATCTGATAGGAGGCAGCAAGCAAGGACATCCTCCAGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CCA 90 bp | TTTTTGATCAGCAGTATCAGAAATCATGAATCCTATGGTCCCAAGGCTGTGGTTGCAGGGCGAAGAGAATaGGCAGCAGAGCCAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLISSIRNHESYGPKAVVAGRRE*AAEPAA Trigger: TGCCGCTGGCTCTGCTGCCCATTCTCTTCGCCCTGC...AACCACAGCCTTGGGACCATAGGATTCATGATTTCTGATACTGCTGATCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR CCA 90 bp | TACATGGGGCAAATATTTACTGAGCACTGGCGGTGTGCTGGAACCTGGTCCAGATTTGAACTGTGTTGTTaGTCAAGGCTGGTGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YMGQIFTEHWRCAGTWSRFELCC*SRLVAV Trigger: CACTGCCACCAGCCTTGACCAACAACACAGTTCAAA...TCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGTAAATATTTGCCCCATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
||
| CDS-3UTR TCA 90 bp | TACATGGGGCAAATATTTACTGAGCACTGGCGGTGTGCTGGAACCTGGTCCAGAAGTAAGGAATGGAAATaGGGAAGCCCTTCCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: YMGQIFTEHWRCAGTWSRSKEWK*GSPSRC Trigger: ACATCTGGAAGGGCTTCCTCATTTCCATTCCTTACT...TCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGTAAATATTTGCCCCATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| CDS-3UTR TCA 90 bp | TTTTTGATCAGCAGTATCAGAAATCATGAATCCTATGGTCCCAAGGCTGTGGTTTTGAGACCGGCAGCATaGAGGCGTAGGAGCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FLISSIRNHESYGPKAVVLRPAA*RRRSSR Trigger: TCGGCTGCTCCTACGCCTTCATGCTGCCGGTCTCAA...AACCACAGCCTTGGGACCATAGGATTCATGATTTCTGATACTGCTGATCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR GCA 90 bp | TTTTTGATCAGCAGTATCAGAAATCATGAATCCTATGGTCCCAAGGCTGTGGTTCAAGGCTGGTGGCAGTaGGGTGGCGTTAGCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FLISSIRNHESYGPKAVVQGWWQ*GGVSSM Trigger: CATGCTGCTAACGCCACCGCACTGCCACCAGCCTTG...AACCACAGCCTTGGGACCATAGGATTCATGATTTCTGATACTGCTGATCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR CCA 90 bp | TACATGGGGCAAATATTTACTGAGCACTGGCGGTGTGCTGGAACCTGGTCCAGACGTCAGCTCGTATCTTaGATTTCTTCTTCCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: YMGQIFTEHWRCAGTWSRRQLVS*ISSSSN Trigger: GTTGGAGGAAGAAGAAATCCAAGATACGAGCTGACG...TCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGTAAATATTTGCCCCATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| CDS-3UTR CCA 90 bp | ATCTCTAGTGGCCCGGATCATCTACAAGGGAGATGGTTAAAAAGAGAGGGCAGATTGAGTGAGGGCTTCTaGGAAGGGAAGAAGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISSGPDHLQGRWLKREGRLSEGF*EGKKNR Trigger: CCTGTTCTTCTTCCCTTCCCAGAAGCCCTCACTCAA...TCTGCCCTCTCTTTTTAACCATCTCCCTTGTAGATGATCCGGGCCACTAGAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR TCA 90 bp | TTGATCAGCAGTATCAGAAATCATGAATCCTATGGTCCCAAGGCTGTGGTTCTCAGTCAAACCACCACTTaGGTGAGGGCTTCTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LISSIRNHESYGPKAVVLSQTTT*VRASGK Trigger: CTTCCCAGAAGCCCTCACTCAAGTGGTGGTTTGACT...GAGAACCACAGCCTTGGGACCATAGGATTCATGATTTCTGATACTGCTGATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR GCA 90 bp | TTGATCAGCAGTATCAGAAATCATGAATCCTATGGTCCCAAGGCTGTGGTTCTCCCTTCCAGATGTTTCTaGGGTGTTCCTCCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LISSIRNHESYGPKAVVLPSRCF*GVPPPW Trigger: CCAAGGAGGAGGAACACCGCAGAAACATCTGGAAGG...GAGAACCACAGCCTTGGGACCATAGGATTCATGATTTCTGATACTGCTGATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR CCA 90 bp | CTGGAGGATGTCCTTGCTTGCTGCCTCCTATCAGATTACAGGAAAGAATTGCTTAAGAAACTCTTGAGCTaGCCGAGCAGGATGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEDVLACCLLSDYRKELLKKLLS*PSRMRL Trigger: CAACCTCATCCTGCTCGGCCAGCTCAAGAGTTTCTT...AAGCAATTCTTTCCTGTAATCTGATAGGAGGCAGCAAGCAAGGACATCCTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| CDS-3UTR CCA 90 bp | TTTTTGATCAGCAGTATCAGAAATCATGAATCCTATGGTCCCAAGGCTGTGGTTGGATGGCACTGGCAATaGGTAGCATCATTGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLISSIRNHESYGPKAVVGWHWQ*VASLRW Trigger: CCACCGCAATGATGCTACCCATTGCCAGTGCCATCC...AACCACAGCCTTGGGACCATAGGATTCATGATTTCTGATACTGCTGATCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR CCA 90 bp | ATCTCTAGTGGCCCGGATCATCTACAAGGGAGATGGTTAAAAAGAGAGGGCAGACGTCAGCTCGTATCTTaGATTTCTTCTTCCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISSGPDHLQGRWLKREGRRQLVS*ISSSSN Trigger: GTTGGAGGAAGAAGAAATCCAAGATACGAGCTGACG...TCTGCCCTCTCTTTTTAACCATCTCCCTTGTAGATGATCCGGGCCACTAGAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR CCA 90 bp | TTTTTGATCAGCAGTATCAGAAATCATGAATCCTATGGTCCCAAGGCTGTGGTTGGGAGAAGAGGAGGATaGCAAACGTGCAGAACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLISSIRNHESYGPKAVVGRRGG*QTCRTR Trigger: TCTTGTTCTGCACGTTTGCCATCCTCCTCTTCTCCC...AACCACAGCCTTGGGACCATAGGATTCATGATTTCTGATACTGCTGATCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR CCA 90 bp | TTTTTGATCAGCAGTATCAGAAATCATGAATCCTATGGTCCCAAGGCTGTGGTTTTGAGTGAGGGCTTCTaGGAAGGGAAGAAGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLISSIRNHESYGPKAVVLSEGF*EGKKNR Trigger: CCTGTTCTTCTTCCCTTCCCAGAAGCCCTCACTCAA...AACCACAGCCTTGGGACCATAGGATTCATGATTTCTGATACTGCTGATCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| 3UTR CAA 72 bp | TTCATTCTGAAAGGCCAAGAGTCTTCATATCCAGTATaGACCAACATTCTTTATTTGCGCGCATTTTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: FILKGQESSYPV*TNILYLRAFLI Trigger: GATCAAAAATGCGCGCAAATAAAGAATGTTGGTCAATACTGGATATGAAGACTCTTGGCCTTTCAGAATGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| CDS TCA 90 bp | CCCGGGGAAGGTCCTTCCGAGCTTCGCGCTGGCCAAAGAGGCTCTTaGGGATGGCACTGGCAATGGGTAGCATCATTGCGGTGGAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PGEGPSELRAGQRGS*GWHWQWVASLRWRP Trigger: CGGCCTCCACCGCAATGATGCTACCCATTGCCAGTGCCATCCTCAAGAGCCTCTTTGGCCAGCGCGAAGCTCGGAAGGACCTTCCCCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS GCA 90 bp | TCTCCGTGGGCACTGTTCGCAGTCCATTTCCCTGCACAGCAGCTGTaGTCTCGTCGCCTTCCCGGGGAAGGTCCTTCCGAGCTTCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPWALFAVHFPAQQL*SRRLPGEGPSELRA Trigger: AGCGCGAAGCTCGGAAGGACCTTCCCCGGGAAGGCGACGAGAGCACAGCTGCTGTGCAGGGAAATGGACTGCGAACAGTGCCCACGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS CCA 90 bp | CGTGAAGAAGGCGATGACCACGGTGATGAGCAGCACTGCCAGCAGTaGGGGGACATGCTCCAGGGGGTGCAGCTGTCCACCGATCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: REEGDDHGDEQHCQQ*GDMLQGVQLSTDPC Trigger: GCATGGATCGGTGGACAGCTGCACCCCCTGGAGCATGTCCCCCCACTGCTGGCAGTGCTGCTCATCACCGTGGTCATCGCCTTCTTCACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS TCA 90 bp | TGCCCAGCTGGAAGATGGTCTGTGCCCAGGTGTTCATGGCCAGGCTaGGCAGCAGGACACCCATCAGGTTCATCAGCAGGCCCGTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: CPAGRWSVPRCSWPG*AAGHPSGSSAGPSA Trigger: TGCGGACGGGCCTGCTGATGAACCTGATGGGTGTCCTGCTGCTCAGCCTGGCCATGAACACCTGGGCACAGACCATCTTCCAGCTGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS GCA 90 bp | GGTGTTGGCCCAGTCTGGGAAGGTGCCCAGCTGGAAGATGGTCTGTaGCCAGGTGTTCATGGCCAGGCTGAGCAGCAGGACACCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVGPVWEGAQLEDGL*PGVHGQAEQQDTHQ Trigger: CTGATGGGTGTCCTGCTGCTCAGCCTGGCCATGAACACCTGGGCACAGACCATCTTCCAGCTGGGCACCTTCCCAGACTGGGCCAACACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS CCA 90 bp | GCGTTAGCAGCATGGGTGTTGGCCCAGTCTGGGAAGGTGCCCAGCTaGAAGATGGTCTGTGCCCAGGTGTTCATGGCCAGGCTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALAAWVLAQSGKVPS*KMVCAQVFMARLSS Trigger: GCTGCTCAGCCTGGCCATGAACACCTGGGCACAGACCATCTTCCAGCTGGGCACCTTCCCAGACTGGGCCAACACCCATGCTGCTAACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR CAA 90 bp | GCTTCCTGGCTTCAGCCTCTAGTGGAAGGCTGTCTTGGGTGGGGTGGGGTAGAGTACTGGGGGCAGACCTaGCTGGAGGGCAGAATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASWLQPLVEGCLGWGGVEYWGQT*LEGRMP Trigger: GGGCATTCTGCCCTCCAGCAAGGTCTGCCCCCAGTA...CTCTACCCCACCCCACCCAAGACAGCCTTCCACTAGAGGCTGAAGCCAGGAAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTGGCTTCAGCCTCTAGTGGAAGGCTGTCTTGGGTGGGGTGGGGTAGAGGCGGTGGAGGCCGTGTaGCTCAGCCACATAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASWLQPLVEGCLGWGGVEAVEAV*LSHIDR Trigger: CCTGTCTATGTGGCTGAGCAACACGGCCTCCACCGC...CTCTACCCCACCCCACCCAAGACAGCCTTCCACTAGAGGCTGAAGCCAGGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS TCA 90 bp | GACCAGCAAGTGTCCAGTAGAGAAGGCAATGGAGTTTGGGGGTGTTaGGACCGGCAGCATGAAGGCGTAGGAGCAGCCGACCGTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DQQVSSREGNGVWGC*DRQHEGVGAADRAW Trigger: CCAGGCACGGTCGGCTGCTCCTACGCCTTCATGCTGCCGGTCTCAACACCCCCAAACTCCATTGCCTTCTCTACTGGACACTTGCTGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS GCA 90 bp | GGCTGGACCCCAACCAGCATGAGGACCTTGAGGGCGATTCTCCGGTaGAAGTTCCATTCCTCTATGGCGCTGGCCATGATCAGGCCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: GWTPTSMRTLRAILR*KFHSSMALAMIRPL Trigger: TAGCGGCCTGATCATGGCCAGCGCCATAGAGGAATGGAACTTGCACCGGAGAATCGCCCTCAAGGTCCTCATGCTGGTTGGGGTCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS GCA 90 bp | GCAAGAAACTGCATCTCCGTGGGCACTGTTCGCAGTCCATTTCCCTaGACAGCAGCTGTGCTCTCGTCGCCTTCCCGGGGAAGGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ARNCISVGTVRSPFP*TAAVLSSPSRGRSF Trigger: GAAGGACCTTCCCCGGGAAGGCGACGAGAGCACAGCTGCTGTGCAGGGAAATGGACTGCGAACAGTGCCCACGGAGATGCAGTTTCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR CAA 90 bp | GCTGAAGCTGATTCAGTCCTACGTTGTCACCTCTCGCTGAGGGCCCCCTCCACGTTAGCAGCATGGGTGTaGGCCCAGTCTGGGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AEADSVLRCHLSLRAPSTLAAWV*AQSGKV Trigger: CACCTTCCCAGACTGGGCCAACACCCATGCTGCTAA...CGTGGAGGGGGCCCTCAGCGAGAGGTGACAACGTAGGACTGAATCAGCTTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CAA 90 bp | CCTCCCTCTGGAGGAAGTGATAGCTCCACCCCCAGGTACCAGCAGAGTTCTGAGCAATGGGTAGCATCATaGCGGTGGAGGCCGTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PPSGGSDSSTPRYQQSSEQWVAS*RWRPCC Trigger: GCAACACGGCCTCCACCGCAATGATGCTACCCATTG...CTCAGAACTCTGCTGGTACCTGGGGGTGGAGCTATCACTTCCTCCAGAGGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CAA 90 bp | GCTGAAGCTGATTCAGTCCTACGTTGTCACCTCTCGCTGAGGGCCCCCTCCACGTGGCCAAAGAGGCTCTaGAGGATGGCACTGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: AEADSVLRCHLSLRAPSTWPKRL*RMALAM Trigger: CATTGCCAGTGCCATCCTCAAGAGCCTCTTTGGCCA...CGTGGAGGGGGCCCTCAGCGAGAGGTGACAACGTAGGACTGAATCAGCTTCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CAA 90 bp | ACATCTGGCCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGCAGCCAGGGATGAACTaGGGGTCCCGGGAGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSGLELWSRKASPVSGPEQPGMN*GSREKR Trigger: CCTCTTCTCCCGGGACCCCAAGTTCATCCCTGGCTG...CTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTGGCTTCAGCCTCTAGTGGAAGGCTGTCTTGGGTGGGGTGGGGTAGAGAGAAGGCAATGGAGTTaGGGGGTGTTGAGACCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASWLQPLVEGCLGWGGVERRQWS*GVLRPA Trigger: TGCCGGTCTCAACACCCCCAAACTCCATTGCCTTCT...CTCTACCCCACCCCACCCAAGACAGCCTTCCACTAGAGGCTGAAGCCAGGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CAA 90 bp | TCCTATGGTCCCAAGGCTGTGGTTCTCTCTGTGCATGTCCGTCCTTGTCCCCCGTTAGCAGCATGGGTGTaGGCCCAGTCTGGGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SYGPKAVVLSVHVRPCPPLAAWV*AQSGKV Trigger: CACCTTCCCAGACTGGGCCAACACCCATGCTGCTAA...CGGGGGACAAGGACGGACATGCACAGAGAGAACCACAGCCTTGGGACCATAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS CCA 90 bp | GCTCCATCGGGGCCTCTGCATCCTCAGTGTGACCTCCTTCCGAACTaGCAAGAAACTGCATCTCCGTGGGCACTGTTCGCAGTCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: APSGPLHPQCDLLPN*QETASPWALFAVHF Trigger: GAAATGGACTGCGAACAGTGCCCACGGAGATGCAGTTTCTTGCCAGTTCGGAAGGAGGTCACACTGAGGATGCAGAGGCCCCGATGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS CCA 90 bp | AAGCCACCTCCTAGAAGAAGGATAATGTTCCAGGGCACTGTCTCCTaGGCCTTCTTCCAGCTCAGCAGGGGCTCCGTCTCCGAGTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KPPPRRRIMFQGTVS*AFFQLSRGSVSELG Trigger: TCCCAACTCGGAGACGGAGCCCCTGCTGAGCTGGAAGAAGGCCCAGGAGACAGTGCCCTGGAACATTATCCTTCTTCTAGGAGGTGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS CCA 90 bp | TCAGCTCGTATCTTGGATTTCTTCTTCCTCCAACTTCTCTTGAGCTaGCCGAGCAGGATGAGGTTGGGGGCGGTGCCCGTGAGGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SARILDFFFLQLLLS*PSRMRLGAVPVRVA Trigger: TGCCACCCTCACGGGCACCGCCCCCAACCTCATCCTGCTCGGCCAGCTCAAGAGAAGTTGGAGGAAGAAGAAATCCAAGATACGAGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109279.3 |
||
| CDS-3UTR CAA 90 bp | GGGCAAATATTTACTGAGCACTGGCGGTGTGCTGGAACCTGGTCCAGACATCTGGCGGTGGAGGCCGTGTaGCTCAGCCACATAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GQIFTEHWRCAGTWSRHLAVEAV*LSHIDR Trigger: CCTGTCTATGTGGCTGAGCAACACGGCCTCCACCGC...CAGATGTCTGGACCAGGTTCCAGCACACCGCCAGTGCTCAGTAAATATTTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
||
| CDS-3UTR CAA 90 bp | TCCTATGGTCCCAAGGCTGTGGTTCTCTCTGTGCATGTCCGTCCTTGTCCCCCGTGTGGGAAGAAACTCTaGAGCTGGCCGAGCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SYGPKAVVLSVHVRPCPPCGKKL*SWPSRM Trigger: CATCCTGCTCGGCCAGCTCAAGAGTTTCTTCCCACA...CGGGGGACAAGGACGGACATGCACAGAGAGAACCACAGCCTTGGGACCATAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
||
| CDS-3UTR CAA 90 bp | CCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGACCTAAAGCAGCCAGGGATGAACTaGGGGTCCCGGGAGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PRALESQSLSCLWSRDLKQPGMN*GSREKR Trigger: CCTCTTCTCCCGGGACCCCAAGTTCATCCCTGGCTG...CTTTAGGTCTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CAA 90 bp | CTGCAGACAGTGAGCCGGTGGCTCCAGGAAACCACTGGAGGATGTCCTTGCTTGATGATGGTGGCCGTGTaGCTGGCAAACTCCGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LQTVSRWLQETTGGCPCLMMVAV*LANSVK Trigger: CTTCACGGAGTTTGCCAGCAACACGGCCACCATCAT...CAAGCAAGGACATCCTCCAGTGGTTTCCTGGAGCCACCGGCTCACTGTCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS CCA 90 bp | CCTCAGTGTGACCTCCTTCCGAACTGGCAAGAAACTGCATCTCCGTaGGCACTGTTCGCAGTCCATTTCCCTGCACAGCAGCTGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PQCDLLPNWQETASP*ALFAVHFPAQQLCS Trigger: AGAGCACAGCTGCTGTGCAGGGAAATGGACTGCGAACAGTGCCCACGGAGATGCAGTTTCTTGCCAGTTCGGAAGGAGGTCACACTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CAA 90 bp | ACATCTGGCCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGGCCTGTTCAGCAAACTaGATGGGCCCCAGGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSGLELWSRKASPVSGPEACSAN*MGPRFW Trigger: CCAGAACCTGGGGCCCATCAAGTTTGCTGAACAGGC...CTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTGGCTTCAGCCTCTAGTGGAAGGCTGTCTTGGGTGGGGTGGGGTAGAGAAGTCAAACCACCACTaGAGTGAGGGCTTCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASWLQPLVEGCLGWGGVEKSNHH*SEGFWE Trigger: TTCCCAGAAGCCCTCACTCAAGTGGTGGTTTGACTT...CTCTACCCCACCCCACCCAAGACAGCCTTCCACTAGAGGCTGAAGCCAGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CAA 90 bp | GGGAGGACAAACCCAGTTGTCAGGGTAAAAACAGCTCTGCAGCCACAGAGCCCCATGATGGTGGCCGTGTaGCTGGCAAACTCCGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRTNPVVRVKTALQPQSPMMVAV*LANSVK Trigger: CTTCACGGAGTTTGCCAGCAACACGGCCACCATCAT...GGGGCTCTGTGGCTGCAGAGCTGTTTTTACCCTGACAACTGGGTTTGTCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CAA 90 bp | GTGGGGTGTCTCCATCTGCACAATGTTACAATGCTACAGCGTACTTCTGGCCTAACCAGCATGAGGACCTaGAGGGCGATTCTCCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VGCLHLHNVTMLQRTSGLTSMRT*RAILRC Trigger: GCACCGGAGAATCGCCCTCAAGGTCCTCATGCTGGT...TAGGCCAGAAGTACGCTGTAGCATTGTAACATTGTGCAGATGGAGACACCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS TCA 90 bp | ATGGGCCCCAGGTTCTGGAACTCCTCCTGGATCACCGCTTTAGCCTaGTCCTCTGCGTCAGCTCGTATCTTGGATTTCTTCTTCCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: MGPRFWNSSWITALA*SSASARILDFFFLQ Trigger: TTGGAGGAAGAAGAAATCCAAGATACGAGCTGACGCAGAGGATCAGGCTAAAGCGGTGATCCAGGAGGAGTTCCAGAACCTGGGGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CAA 90 bp | ACATCTGGCCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGCTAAGGAAGAGGAAGTaGGTGTCGAGGAAGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSGLELWSRKASPVSGPELRKRK*VSRKYW Trigger: CCAGTACTTCCTCGACACCAACTTCCTCTTCCTTAG...CTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR CAA 90 bp | ACATCTGGCCTAGAGCTTTGGAGTCGCAAAGCCTCTCCTGTCTCTGGTCCAGAGTCCGAGTTGGGAGCTTaGAAGTCAAACCACCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TSGLELWSRKASPVSGPESELGA*KSNHHL Trigger: CAAGTGGTGGTTTGACTTCAAAGCTCCCAACTCGGA...CTCTGGACCAGAGACAGGAGAGGCTTTGCGACTCCAAAGCTCTAGGCCAGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS-3UTR CAA 90 bp | CCACTTGGGGTGGGAGTAGGGAGGACAAACCCAGTTGTCAGGGTAAAAACAGCTGTCCGCACCATGTCTTaGACCAGCAAGTGTCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PLGVGVGRTNPVVRVKTAVRTMS*TSKCPV Trigger: TACTGGACACTTGCTGGTCAAAGACATGGTGCGGAC...AGCTGTTTTTACCCTGACAACTGGGTTTGTCCTCCCTACTCCCACCCCAAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR CAA 90 bp | TTGGGTAGATGTGTGAGCTGGAGTTTCTTGACACCCCCTCTCCCCCATAGTGTGGTCCGCACCATGTCTTaGACCAGCAAGTGTCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LGRCVSWSFLTPPLPHSVVRTMS*TSKCPV Trigger: TACTGGACACTTGCTGGTCAAAGACATGGTGCGGAC...CACACTATGGGGGAGAGGGGGTGTCAAGAAACTCCAGCTCACACATCTACCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS GCA 90 bp | CAGGTTCTGGAACTCCTCCTGGATCACCGCTTTAGCCTGATCCTCTaGGTCAGCTCGTATCTTGGATTTCTTCTTCCTCCAACTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QVLELLLDHRFSLIL*VSSYLGFLLPPTSP Trigger: TGGAGAAGTTGGAGGAAGAAGAAATCCAAGATACGAGCTGACGCAGAGGATCAGGCTAAAGCGGTGATCCAGGAGGAGTTCCAGAACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| CDS-3UTR CAA 90 bp | ATCTGGGGTTTCATTCTGAAAGGCCAAGAGTCTTCATATCCAGTATTGACCAACTACTGGGGGCAGACCTaGCTGGAGGGCAGAATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: IWGFILKGQESSYPVLTNYWGQT*LEGRMP Trigger: GGGCATTCTGCCCTCCAGCAAGGTCTGCCCCCAGTA...GTTGGTCAATACTGGATATGAAGACTCTTGGCCTTTCAGAATGAAACCCCAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
||
| CDS GCA 90 bp | CAGGTTCTGGAACTCCTCCTGGATCACCGCTTTAGCCTGATCCTCTaGGTCAGCTCGTATCTTGGATTTCTTCTTCCTCCAACTTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QVLELLLDHRFSLIL*VSSYLGFLLPPTSL Trigger: AAGAGAAGTTGGAGGAAGAAGAAATCCAAGATACGAGCTGACGCAGAGGATCAGGCTAAAGCGGTGATCCAGGAGGAGTTCCAGAACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109279.3 |
||
| CDS-3UTR CAA 90 bp | TGCCAGAGGCTTTTAACAGGAATAAGGACAGCAACTGTCTGCTTCCTGGCTTCACTAAGGAAGAGGAAGTaGGTGTCGAGGAAGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: CQRLLTGIRTATVCFLASLRKRK*VSRKYW Trigger: CCAGTACTTCCTCGACACCAACTTCCTCTTCCTTAG...TGAAGCCAGGAAGCAGACAGTTGCTGTCCTTATTCCTGTTAAAAGCCTCTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR CAA 90 bp | ATCTGGGGTTTCATTCTGAAAGGCCAAGAGTCTTCATATCCAGTATTGACCAACGCCTGTTCAGCAAACTaGATGGGCCCCAGGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IWGFILKGQESSYPVLTNACSAN*MGPRFW Trigger: CCAGAACCTGGGGCCCATCAAGTTTGCTGAACAGGC...GTTGGTCAATACTGGATATGAAGACTCTTGGCCTTTCAGAATGAAACCCCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| CDS-3UTR CAA 90 bp | TTGATCAGCAGTATCAGAAATCATGAATCCTATGGTCCCAAGGCTGTGGTTCTCTTCCTCCAACTTCTCTaGAGCTGGCCGAGCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LISSIRNHESYGPKAVVLFLQLL*SWPSRM Trigger: CATCCTGCTCGGCCAGCTCAAGAGAAGTTGGAGGAA...GAGAACCACAGCCTTGGGACCATAGGATTCATGATTTCTGATACTGCTGATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109279.3 |
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| CDS-3UTR CAA 90 bp | CTGGAGGATGTCCTTGCTTGCTGCCTCCTATCAGATTACAGGAAAGAATTGCTTTCCGAGTTGGGAGCTTaGAAGTCAAACCACCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LEDVLACCLLSDYRKELLSELGA*KSNHHL Trigger: CAAGTGGTGGTTTGACTTCAAAGCTCCCAACTCGGA...AAGCAATTCTTTCCTGTAATCTGATAGGAGGCAGCAAGCAAGGACATCCTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR CAA 90 bp | GGTTTCATTCTGAAAGGCCAAGAGTCTTCATATCCAGTATTGACCAACATTCTTCAATGGGTAGCATCATaGCGGTGGAGGCCGTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GFILKGQESSYPVLTNILQWVAS*RWRPCC Trigger: GCAACACGGCCTCCACCGCAATGATGCTACCCATTG...AAGAATGTTGGTCAATACTGGATATGAAGACTCTTGGCCTTTCAGAATGAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| CDS-3UTR CAA 90 bp | TTTTTGATCAGCAGTATCAGAAATCATGAATCCTATGGTCCCAAGGCTGTGGTTAGAAGGCAATGGAGTTaGGGGGTGTTGAGACCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLISSIRNHESYGPKAVVRRQWS*GVLRPA Trigger: TGCCGGTCTCAACACCCCCAAACTCCATTGCCTTCT...AACCACAGCCTTGGGACCATAGGATTCATGATTTCTGATACTGCTGATCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS-3UTR CAA 90 bp | GGTTTCATTCTGAAAGGCCAAGAGTCTTCATATCCAGTATTGACCAACATTCTTTGGCCAAAGAGGCTCTaGAGGATGGCACTGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: GFILKGQESSYPVLTNILWPKRL*RMALAM Trigger: CATTGCCAGTGCCATCCTCAAGAGCCTCTTTGGCCA...AAGAATGTTGGTCAATACTGGATATGAAGACTCTTGGCCTTTCAGAATGAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| CDS-3UTR CAA 90 bp | GGTTTCATTCTGAAAGGCCAAGAGTCTTCATATCCAGTATTGACCAACATTCTTAAGTCAAACCACCACTaGAGTGAGGGCTTCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GFILKGQESSYPVLTNILKSNHH*SEGFWE Trigger: TTCCCAGAAGCCCTCACTCAAGTGGTGGTTTGACTT...AAGAATGTTGGTCAATACTGGATATGAAGACTCTTGGCCTTTCAGAATGAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029208.15 |
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| CDS CCA 72 bp | GGCGATGACCACGGTGATGAGCAGCACTGCCAGCAGTaGGGGGACATGCTCCAGGGGGTGCAGCTGTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GDDHGDEQHCQQ*GDMLQGVQLST Trigger: GGTGGACAGCTGCACCCCCTGGAGCATGTCCCCCCACTGCTGGCAGTGCTGCTCATCACCGTGGTCATCGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS GCA 72 bp | ACCGTGCCTGGGATCATCAGGTACAAGGGGTGCACATaGAGTCGGATGGCCAGCTCTGCCAGGACGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TVPGIIRYKGCT*SRMASSARTGR Trigger: CCTGCCCGTCCTGGCAGAGCTGGCCATCCGACTGCATGTGCACCCCTTGTACCTGATGATCCCAGGCACGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS GCA 72 bp | CAGCCGACCGTGCCTGGGATCATCAGGTACAAGGGGTaGACATGCAGTCGGATGGCCAGCTCTGCCAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: QPTVPGIIRYKG*TCSRMASSART Trigger: CGTCCTGGCAGAGCTGGCCATCCGACTGCATGTGCACCCCTTGTACCTGATGATCCCAGGCACGGTCGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS CAA 72 bp | GCTGGTGGCAGTGCGGTGGCGTTAGCAGCATGGGTGTaGGCCCAGTCTGGGAAGGTGCCCAGCTGGAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: AGGSAVALAAWV*AQSGKVPSWKM Trigger: CATCTTCCAGCTGGGCACCTTCCCAGACTGGGCCAACACCCATGCTGCTAACGCCACCGCACTGCCACCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS CAA 90 bp | TCCCGGGGAAGGTCCTTCCGAGCTTCGCGCTGGCCAAAGAGGCTCTaGAGGATGGCACTGGCAATGGGTAGCATCATTGCGGTGGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRGRSFRASRWPKRL*RMALAMGSIIAVEA Trigger: GGCCTCCACCGCAATGATGCTACCCATTGCCAGTGCCATCCTCAAGAGCCTCTTTGGCCAGCGCGAAGCTCGGAAGGACCTTCCCCGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS GCA 72 bp | TGCATCTCCGTGGGCACTGTTCGCAGTCCATTTCCCTaGACAGCAGCTGTGCTCTCGTCGCCTTCCCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CISVGTVRSPFP*TAAVLSSPSRG Trigger: TCCCCGGGAAGGCGACGAGAGCACAGCTGCTGTGCAGGGAAATGGACTGCGAACAGTGCCCACGGAGATGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS GCA 72 bp | CCAGTCTGGGAAGGTGCCCAGCTGGAAGATGGTCTGTaGCCAGGTGTTCATGGCCAGGCTGAGCAGCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PVWEGAQLEDGL*PGVHGQAEQQD Trigger: GTCCTGCTGCTCAGCCTGGCCATGAACACCTGGGCACAGACCATCTTCCAGCTGGGCACCTTCCCAGACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS CCA 72 bp | CGGCAGCATGAAGGCGTAGGAGCAGCCGACCGTGCCTaGGATCATCAGGTACAAGGGGTGCACATGCAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: RQHEGVGAADRA*DHQVQGVHMQS Trigger: CGACTGCATGTGCACCCCTTGTACCTGATGATCCCAGGCACGGTCGGCTGCTCCTACGCCTTCATGCTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS CAA 90 bp | GAGACAAACCCAGGGGCGAAGAGGCTGGCCCAGCCAGGGATGAACTaGGGGTCCCGGGAGAAGAGGAGGATGGCAAACGTGCAGAACAAG | + |
|
Preference number: 6 (lower is better) Translates to: ETNPGAKRLAQPGMN*GSREKRRMANVQNK Trigger: CTTGTTCTGCACGTTTGCCATCCTCCTCTTCTCCCGGGACCCCAAGTTCATCCCTGGCTGGGCCAGCCTCTTCGCCCCTGGGTTTGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS TCA 72 bp | AGGCAATGGAGTTTGGGGGTGTTGAGACCGGCAGCATaGAGGCGTAGGAGCAGCCGACCGTGCCTGGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: RQWSLGVLRPAA*RRRSSRPCLGS Trigger: TGATCCCAGGCACGGTCGGCTGCTCCTACGCCTTCATGCTGCCGGTCTCAACACCCCCAAACTCCATTGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS CAA 90 bp | CCCAGGATGAGCCTTGCAGGCTGGACCCCAACCAGCATGAGGACCTaGAGGGCGATTCTCCGGTGCAAGTTCCATTCCTCTATGGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PRMSLAGWTPTSMRT*RAILRCKFHSSMAL Trigger: CAGCGCCATAGAGGAATGGAACTTGCACCGGAGAATCGCCCTCAAGGTCCTCATGCTGGTTGGGGTCCAGCCTGCAAGGCTCATCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS TCA 72 bp | GGTCCTTCCGAGCTTCGCGCTGGCCAAAGAGGCTCTTaGGGATGGCACTGGCAATGGGTAGCATCATTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GPSELRAGQRGS*GWHWQWVASLR Trigger: CCGCAATGATGCTACCCATTGCCAGTGCCATCCTCAAGAGCCTCTTTGGCCAGCGCGAAGCTCGGAAGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS TCA 72 bp | GGAAGATGGTCTGTGCCCAGGTGTTCATGGCCAGGCTaGGCAGCAGGACACCCATCAGGTTCATCAGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRWSVPRCSWPG*AAGHPSGSSAG Trigger: GCCTGCTGATGAACCTGATGGGTGTCCTGCTGCTCAGCCTGGCCATGAACACCTGGGCACAGACCATCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS CAA 72 bp | GCGCTGGCCATGATCAGGCCGCTAAGGAAGAGGAAGTaGGTGTCGAGGAAGTACTGGGGGCAGACCTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALAMIRPLRKRK*VSRKYWGQTLL Trigger: CAGCAAGGTCTGCCCCCAGTACTTCCTCGACACCAACTTCCTCTTCCTTAGCGGCCTGATCATGGCCAGCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS CAA 90 bp | TCCTCTATGGCGCTGGCCATGATCAGGCCGCTAAGGAAGAGGAAGTaGGTGTCGAGGAAGTACTGGGGGCAGACCTTGCTGGAGGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSMALAMIRPLRKRK*VSRKYWGQTLLEGR Trigger: TCTGCCCTCCAGCAAGGTCTGCCCCCAGTACTTCCTCGACACCAACTTCCTCTTCCTTAGCGGCCTGATCATGGCCAGCGCCATAGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS CAA 90 bp | TCTGCGTCAGCTCGTATCTTGGATTTCTTCTTCCTCCAACTTCTCTaGAGCTGGCCGAGCAGGATGAGGTTGGGGGCGGTGCCCGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SASARILDFFFLQLL*SWPSRMRLGAVPVR Trigger: CCTCACGGGCACCGCCCCCAACCTCATCCTGCTCGGCCAGCTCAAGAGAAGTTGGAGGAAGAAGAAATCCAAGATACGAGCTGACGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109279.3 |
||
| CDS TCA 72 bp | GTGTCCAGTAGAGAAGGCAATGGAGTTTGGGGGTGTTaGGACCGGCAGCATGAAGGCGTAGGAGCAGCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: VSSREGNGVWGC*DRQHEGVGAAD Trigger: GTCGGCTGCTCCTACGCCTTCATGCTGCCGGTCTCAACACCCCCAAACTCCATTGCCTTCTCTACTGGACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
||
| CDS GCA 72 bp | GGTTTGAACTGTGTTGTTGGTCAAGGCTGGTGGCAGTaGGGTGGCGTTAGCAGCATGGGTGTTGGCCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: GLNCVVGQGWWQ*GGVSSMGVGPV Trigger: GACTGGGCCAACACCCATGCTGCTAACGCCACCGCACTGCCACCAGCCTTGACCAACAACACAGTTCAAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS CCA 72 bp | CCGCTAAGGAAGAGGAAGTTGGTGTCGAGGAAGTACTaGGGGCAGACCTTGCTGGAGGGCAGAATGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: PLRKRKLVSRKY*GQTLLEGRMPM Trigger: CATGGGCATTCTGCCCTCCAGCAAGGTCTGCCCCCAGTACTTCCTCGACACCAACTTCCTCTTCCTTAGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS CCA 72 bp | GGGCCTCTGCATCCTCAGTGTGACCTCCTTCCGAACTaGCAAGAAACTGCATCTCCGTGGGCACTGTTCGCA | + |
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Preference number: 6 (lower is better) Translates to: GPLHPQCDLLPN*QETASPWALFA Trigger: TGCGAACAGTGCCCACGGAGATGCAGTTTCTTGCCAGTTCGGAAGGAGGTCACACTGAGGATGCAGAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS CAA 72 bp | AGCCTTGCAGGCTGGACCCCAACCAGCATGAGGACCTaGAGGGCGATTCTCCGGTGCAAGTTCCATTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SLAGWTPTSMRT*RAILRCKFHSS Trigger: AGAGGAATGGAACTTGCACCGGAGAATCGCCCTCAAGGTCCTCATGCTGGTTGGGGTCCAGCCTGCAAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS CAA 72 bp | AGGTCCTTCCGAGCTTCGCGCTGGCCAAAGAGGCTCTaGAGGATGGCACTGGCAATGGGTAGCATCATTGCG | + |
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Preference number: 6 (lower is better) Translates to: RSFRASRWPKRL*RMALAMGSIIA Trigger: CGCAATGATGCTACCCATTGCCAGTGCCATCCTCAAGAGCCTCTTTGGCCAGCGCGAAGCTCGGAAGGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS CAA 72 bp | CAGCTCAGCAGGGGCTCCGTCTCCGAGTTGGGAGCTTaGAAGTCAAACCACCACTTGAGTGAGGGCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: QLSRGSVSELGA*KSNHHLSEGFW Trigger: CCAGAAGCCCTCACTCAAGTGGTGGTTTGACTTCAAAGCTCCCAACTCGGAGACGGAGCCCCTGCTGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS CAA 90 bp | CTAAGGAAGAGGAAGTTGGTGTCGAGGAAGTACTGGGGGCAGACCTaGCTGGAGGGCAGAATGCCCATGAAGGGGAAGAGGATGATGGGC | + |
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Preference number: 6 (lower is better) Translates to: LRKRKLVSRKYWGQT*LEGRMPMKGKRMMG Trigger: GCCCATCATCCTCTTCCCCTTCATGGGCATTCTGCCCTCCAGCAAGGTCTGCCCCCAGTACTTCCTCGACACCAACTTCCTCTTCCTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS CAA 90 bp | AGGATGGCACTGGCAATGGGTAGCATCATTGCGGTGGAGGCCGTGTaGCTCAGCCACATAGACAGGAATGACGTGGTCACCATCATCCCC | + |
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Preference number: 6 (lower is better) Translates to: RMALAMGSIIAVEAV*LSHIDRNDVVTIIP Trigger: GGGGATGATGGTGACCACGTCATTCCTGTCTATGTGGCTGAGCAACACGGCCTCCACCGCAATGATGCTACCCATTGCCAGTGCCATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS GCA 72 bp | CCAACCAGCATGAGGACCTTGAGGGCGATTCTCCGGTaGAAGTTCCATTCCTCTATGGCGCTGGCCATGATC | + |
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Preference number: 6 (lower is better) Translates to: PTSMRTLRAILR*KFHSSMALAMI Trigger: GATCATGGCCAGCGCCATAGAGGAATGGAACTTGCACCGGAGAATCGCCCTCAAGGTCCTCATGCTGGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS CCA 72 bp | GACCTCCTTCCGAACTGGCAAGAAACTGCATCTCCGTaGGCACTGTTCGCAGTCCATTTCCCTGCACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: DLLPNWQETASP*ALFAVHFPAQQ Trigger: CTGCTGTGCAGGGAAATGGACTGCGAACAGTGCCCACGGAGATGCAGTTTCTTGCCAGTTCGGAAGGAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS CAA 72 bp | CTGGCAATGGGTAGCATCATTGCGGTGGAGGCCGTGTaGCTCAGCCACATAGACAGGAATGACGTGGTCACC | + |
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Preference number: 6 (lower is better) Translates to: LAMGSIIAVEAV*LSHIDRNDVVT Trigger: GGTGACCACGTCATTCCTGTCTATGTGGCTGAGCAACACGGCCTCCACCGCAATGATGCTACCCATTGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS CAA 72 bp | CCGATCCATGCTGATAGCCCAGACTCCTCACAGCCCTaGGCCATGGCAAAGCCACCTCCTAGAAGAAGGATA | + |
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Preference number: 6 (lower is better) Translates to: PIHADSPDSSQP*AMAKPPPRRRI Trigger: TATCCTTCTTCTAGGAGGTGGCTTTGCCATGGCCAAGGGCTGTGAGGAGTCTGGGCTATCAGCATGGATCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS CAA 90 bp | ATGGCAAACGTGCAGAACAAGATGAAGACGGCCTGTTCAGCAAACTaGATGGGCCCCAGGTTCTGGAACTCCTCCTGGATCACCGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: MANVQNKMKTACSAN*MGPRFWNSSWITAL Trigger: TAAAGCGGTGATCCAGGAGGAGTTCCAGAACCTGGGGCCCATCAAGTTTGCTGAACAGGCCGTCTTCATCTTGTTCTGCACGTTTGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS TCA 72 bp | AGGTTCTGGAACTCCTCCTGGATCACCGCTTTAGCCTaGTCCTCTGCGTCAGCTCGTATCTTGGATTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: RFWNSSWITALA*SSASARILDFF Trigger: GAAGAAATCCAAGATACGAGCTGACGCAGAGGATCAGGCTAAAGCGGTGATCCAGGAGGAGTTCCAGAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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| CDS GCA 72 bp | GAACTCCTCCTGGATCACCGCTTTAGCCTGATCCTCTaGGTCAGCTCGTATCTTGGATTTCTTCTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: ELLLDHRFSLIL*VSSYLGFLLPP Trigger: TGGAGGAAGAAGAAATCCAAGATACGAGCTGACGCAGAGGATCAGGCTAAAGCGGTGATCCAGGAGGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029208.15 ENSMUST00000109279.3 |
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