Pregenerated sensors for SLC13A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001095Ensembl transcript IDs: ENSMUST00000001122.6
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGGCTGCGCCCACTCCAAACGGTCTGGCAGGGGTGCGCGACCTCTaGTTCCAGGCCCTGAACACCGGGAAACACACCCGGACTCTACTG | + |
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Preference number: 1 (lower is better) Translates to: VAAPTPNGLAGVRDL*FQALNTGKHTRTLL Trigger: CAGTAGAGTCCGGGTGTGTTTCCCGGTGTTCAGGGCCTGGAAGCAGAGGTCGCGCACCCCTGCCAGACCGTTTGGAGTGGGCGCAGCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| 3UTR CAA 90 bp | GGGACTGGCAGCTCCCAATTAGCCACTGGTGAAGTCACTGCAACATaGCTGGGTGGCTGCGCCCACTCCAAACGGTCTGGCAGGGGTGCG | + |
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Preference number: 2 (lower is better) Translates to: GTGSSQLATGEVTAT*LGGCAHSKRSGRGA Trigger: CGCACCCCTGCCAGACCGTTTGGAGTGGGCGCAGCCACCCAGCAATGTTGCAGTGACTTCACCAGTGGCTAATTGGGAGCTGCCAGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| 3UTR-3UTR TCA 90 bp | AGGCACGCAGGGACTGGCAGCTCCCAATTAGCCACTGGTGAAGTCACTGCAACATCTGCTTCCAGGCCCTaGACACCGGGAAACACACCC | + |
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Preference number: 2 (lower is better) Translates to: RHAGTGSSQLATGEVTATSASRP*TPGNTP Trigger: GGGTGTGTTTCCCGGTGTTCAGGGCCTGGAAGCAGA...TGTTGCAGTGACTTCACCAGTGGCTAATTGGGAGCTGCCAGTCCCTGCGTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| 3UTR GCA 72 bp | CCCACTCCAAACGGTCTGGCAGGGGTGCGCGACCTCTaGTTCCAGGCCCTGAACACCGGGAAACACACCCGG | + |
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Preference number: 3 (lower is better) Translates to: PTPNGLAGVRDL*FQALNTGKHTR Trigger: CCGGGTGTGTTTCCCGGTGTTCAGGGCCTGGAAGCAGAGGTCGCGCACCCCTGCCAGACCGTTTGGAGTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| 3UTR CCA 72 bp | AGCCGATTCTGCACCTCTGTCCCGGGACTTGGAGTTTaGAGCGCCCTCTCCTGGCTCCGAGGAGTGGCACCA | + |
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Preference number: 3 (lower is better) Translates to: SRFCTSVPGLGV*SALSWLRGVAP Trigger: TGGTGCCACTCCTCGGAGCCAGGAGAGGGCGCTCCAAACTCCAAGTCCCGGGACAGAGGTGCAGAATCGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| 3UTR-3UTR CAA 90 bp | GCATCTTCCTCTTCACCGGAGAGCACACATACAGGATGTAGGCAAACACACGAACCCGGGACTTGGAGTTaGGAGCGCCCTCTCCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: ASSSSPESTHTGCRQTHEPGTWS*ERPLLA Trigger: AGCCAGGAGAGGGCGCTCCAAACTCCAAGTCCCGGG...TTCGTGTGTTTGCCTACATCCTGTATGTGTGCTCTCCGGTGAAGAGGAAGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| 3UTR CCA 72 bp | CACCCGGACTCTACTGAAAAAGCCTTTAATGAACCTTaGAGTTCCTGCTCCCAGGGGCCTCCTGCCCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: HPDSTEKAFNEP*SSCSQGPPAQS Trigger: ACTCTGGGCAGGAGGCCCCTGGGAGCAGGAACTCCAAGGTTCATTAAAGGCTTTTTCAGTAGAGTCCGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| 3UTR TCA 72 bp | GCACACATACAGGATGTAGGCAAACACACGAATACATaGTTTCGCATGCGCCAGCCGATTCTGCACCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: AHIQDVGKHTNT*FRMRQPILHLC Trigger: ACAGAGGTGCAGAATCGGCTGGCGCATGCGAAATCATGTATTCGTGTGTTTGCCTACATCCTGTATGTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| 3UTR GCA 72 bp | TCTACTGAAAAAGCCTTTAATGAACCTTGGAGTTCCTaGTCCCAGGGGCCTCCTGCCCAGAGTTTCAATAAA | + |
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Preference number: 3 (lower is better) Translates to: STEKAFNEPWSS*SQGPPAQSFNK Trigger: TTTATTGAAACTCTGGGCAGGAGGCCCCTGGGAGCAGGAACTCCAAGGTTCATTAAAGGCTTTTTCAGTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR TCA 90 bp | CTGGCAGGGGTGCGCGACCTCTGCTTCCAGGCCCTGAACACCGGGAAACACACCAGCCCGGCTCCCTCGTaGACCAGAGCACCACTAGCA | + |
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Preference number: 4 (lower is better) Translates to: LAGVRDLCFQALNTGKHTSPAPS*TRAPLA Trigger: TGCTAGTGGTGCTCTGGTTCACGAGGGAGCCGGGCT...GGTGTGTTTCCCGGTGTTCAGGGCCTGGAAGCAGAGGTCGCGCACCCCTGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| 3UTR CAA 72 bp | CAGCCGATTCTGCACCTCTGTCCCGGGACTTGGAGTTaGGAGCGCCCTCTCCTGGCTCCGAGGAGTGGCACC | + |
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Preference number: 4 (lower is better) Translates to: QPILHLCPGTWS*ERPLLAPRSGT Trigger: GGTGCCACTCCTCGGAGCCAGGAGAGGGCGCTCCAAACTCCAAGTCCCGGGACAGAGGTGCAGAATCGGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | TGGGTGGCTGCGCCCACTCCAAACGGTCTGGCAGGGGTGCGCGACCTCTGCTTCAGATGGCCTGTGCCATaGAGGCCAGGATGGGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: WVAAPTPNGLAGVRDLCFRWPVP*RPGWAE Trigger: TTCTGCCCATCCTGGCCTCCATGGCACAGGCCATCT...GAAGCAGAGGTCGCGCACCCCTGCCAGACCGTTTGGAGTGGGCGCAGCCACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR TCA 90 bp | CTGGGAACGGGGAGGCCGGTTTTCCCAAAGGCACGCAGGGACTGGCAGCTCCCAGCCCCCAATGCTGGCTaGGTAGCAGATGCAGAGACT | + |
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Preference number: 4 (lower is better) Translates to: LGTGRPVFPKARRDWQLPAPNAG*VADAET Trigger: AGTCTCTGCATCTGCTACTCAGCCAGCATTGGGGGC...TGGGAGCTGCCAGTCCCTGCGTGCCTTTGGGAAAACCGGCCTCCCCGTTCCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | TCCAAACGGTCTGGCAGGGGTGCGCGACCTCTGCTTCCAGGCCCTGAACACCGGGAGTTGACCTGGCCTTaGAGCACCAGGTTGGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: SKRSGRGARPLLPGPEHRELTWP*STRLGV Trigger: CACACCCAACCTGGTGCTCCAAGGCCAGGTCAACTC...CCGGTGTTCAGGGCCTGGAAGCAGAGGTCGCGCACCCCTGCCAGACCGTTTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | AGTCACTGCAACATTGCTGGGTGGCTGCGCCCACTCCAAACGGTCTGGCAGGGGTGTGTCACCCCAGCCTaGGAAGAAGCCCGGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SHCNIAGWLRPLQTVWQGCVTPA*EEARLP Trigger: AGGGAGCCGGGCTTCTTCCCAGGCTGGGGTGACACA...CCCCTGCCAGACCGTTTGGAGTGGGCGCAGCCACCCAGCAATGTTGCAGTGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | CTGGCAGGGGTGCGCGACCTCTGCTTCCAGGCCCTGAACACCGGGAAACACACCATTCCTCACTGCCTTTaGCCAGGGCAAAGCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LAGVRDLCFQALNTGKHTIPHCL*PGQSPH Trigger: GTGGGGGCTTTGCCCTGGCCAAAGGCAGTGAGGAAT...GGTGTGTTTCCCGGTGTTCAGGGCCTGGAAGCAGAGGTCGCGCACCCCTGCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR TCA 90 bp | AGGAGCCCTCAGGCCACACCACACGCAAGCGTCCACGCACACCACACGGAGACACTCCACATCCTTTTGTaGGCCCTGCAGCTGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RSPQATPHASVHAHHTETLHILL*ALQLLQ Trigger: CTGGAGCAGCTGCAGGGCTCACAAAAGGATGTGGAG...TGTCTCCGTGTGGTGTGCGTGGACGCTTGCGTGTGGTGTGGCCTGAGGGCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR TCA 90 bp | ATGTCCAGGGAGTGCTCTGGGAACGGGGAGGCCGGTTTTCCCAAAGGCACGCAGGACTCAGGCCCTGGCTaGAGCGGTGATGCTCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: MSRECSGNGEAGFPKGTQDSGPG*SGDALW Trigger: CCAAAGAGCATCACCGCTTCAGCCAGGGCCTGAGTC...CTGCGTGCCTTTGGGAAAACCGGCCTCCCCGTTCCCAGAGCACTCCCTGGACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR GCA 90 bp | AGTCACTGCAACATTGCTGGGTGGCTGCGCCCACTCCAAACGGTCTGGCAGGGGAAGGCAGATGGCCTGTaGCATGGAGGCCAGGATGGG | + |
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Preference number: 4 (lower is better) Translates to: SHCNIAGWLRPLQTVWQGKADGL*HGGQDG Trigger: CCCATCCTGGCCTCCATGGCACAGGCCATCTGCCTT...CCCCTGCCAGACCGTTTGGAGTGGGCGCAGCCACCCAGCAATGTTGCAGTGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | ATGTCCAGGGAGTGCTCTGGGAACGGGGAGGCCGGTTTTCCCAAAGGCACGCAGTGGTACCCGTCAGGGTaGCAATGCCCCCAATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: MSRECSGNGEAGFPKGTQWYPSG*QCPQCW Trigger: CCAGCATTGGGGGCATTGCCACCCTGACGGGTACCA...CTGCGTGCCTTTGGGAAAACCGGCCTCCCCGTTCCCAGAGCACTCCCTGGACAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | GGCCGGTTTTCCCAAAGGCACGCAGGGACTGGCAGCTCCCAATTAGCCACTGGTGCGGGTGAAGGCAGATaGCCTGTGCCATGGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GRFSQRHAGTGSSQLATGAGEGR*PVPWRP Trigger: TGGCCTCCATGGCACAGGCCATCTGCCTTCACCCGC...ACCAGTGGCTAATTGGGAGCTGCCAGTCCCTGCGTGCCTTTGGGAAAACCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | TGGAGGCCTAGCTGGGAGTCAGAGGGCGGGCGCGGTTGCCATGCATACAACTACCGATGGGCAGCATCATaGCTGTGGTGGCTGTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: WRPSWESEGGRGCHAYNYRWAAS*LWWLCC Trigger: GCAACACAGCCACCACAGCCATGATGCTGCCCATCG...GTAGTTGTATGCATGGCAACCGCGCCCGCCCTCTGACTCCCAGCTAGGCCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | GGCCGGTTTTCCCAAAGGCACGCAGGGACTGGCAGCTCCCAATTAGCCACTGGTCTTGGAGCACCAGGTTaGGTGTGGTACCCGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GRFSQRHAGTGSSQLATGLGAPG*VWYPSG Trigger: CCCTGACGGGTACCACACCCAACCTGGTGCTCCAAG...ACCAGTGGCTAATTGGGAGCTGCCAGTCCCTGCGTGCCTTTGGGAAAACCGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | ATGTCCAGGGAGTGCTCTGGGAACGGGGAGGCCGGTTTTCCCAAAGGCACGCAGCCCAGCAGCCTGTGCTaGGTCTTGATGACCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: MSRECSGNGEAGFPKGTQPSSLC*VLMTWK Trigger: CTTCCAGGTCATCAAGACCCAGCACAGGCTGCTGGG...CTGCGTGCCTTTGGGAAAACCGGCCTCCCCGTTCCCAGAGCACTCCCTGGACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | AGGAGCCCTCAGGCCACACCACACGCAAGCGTCCACGCACACCACACGGAGACATCTCTGCAAAACTCATaGGGCCCAGCAGCCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: RSPQATPHASVHAHHTETSLQNS*GPAACA Trigger: AGCACAGGCTGCTGGGCCCCATGAGTTTTGCAGAGA...TGTCTCCGTGTGGTGTGCGTGGACGCTTGCGTGTGGTGTGGCCTGAGGGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR TCA 90 bp | CAACATTGCTGGGTGGCTGCGCCCACTCCAAACGGTCTGGCAGGGGTGCGCGACCCTTGGAGGCTTCCATaGTACCCATCAAAGGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: QHCWVAAPTPNGLAGVRDPWRLP*YPSKGR Trigger: TCTTCCCTTTGATGGGTATCATGGAAGCCTCCAAGG...GTCGCGCACCCCTGCCAGACCGTTTGGAGTGGGCGCAGCCACCCAGCAATGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR TCA 90 bp | CAACATTGCTGGGTGGCTGCGCCCACTCCAAACGGTCTGGCAGGGGTGCGCGACCCACTTAGACAAACCTaGTTCCTCACTGCCTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: QHCWVAAPTPNGLAGVRDPLRQT*FLTAFG Trigger: GCCAAAGGCAGTGAGGAATCAGGTTTGTCTAAGTGG...GTCGCGCACCCCTGCCAGACCGTTTGGAGTGGGCGCAGCCACCCAGCAATGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR GCA 90 bp | ATGTCCAGGGAGTGCTCTGGGAACGGGGAGGCCGGTTTTCCCAAAGGCACGCAGTGGCAATGCCCCCAATaGTGGCTGAGTAGCAGATGC | + |
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Preference number: 4 (lower is better) Translates to: MSRECSGNGEAGFPKGTQWQCPQ*WLSSRC Trigger: GCATCTGCTACTCAGCCAGCATTGGGGGCATTGCCA...CTGCGTGCCTTTGGGAAAACCGGCCTCCCCGTTCCCAGAGCACTCCCTGGACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | CAACATTGCTGGGTGGCTGCGCCCACTCCAAACGGTCTGGCAGGGGTGCGCGACAGCGGTGATGCTCTTTaGTCTTCTGAGCTCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: QHCWVAAPTPNGLAGVRDSGDAL*SSELLA Trigger: AGCCAAGAGCTCAGAAGACCAAAGAGCATCACCGCT...GTCGCGCACCCCTGCCAGACCGTTTGGAGTGGGCGCAGCCACCCAGCAATGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | AGGAGCCCTCAGGCCACACCACACGCAAGCGTCCACGCACACCACACGGAGACACAATGCCCCCAATGCTaGCTGAGTAGCAGATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RSPQATPHASVHAHHTETQCPQC*LSSRCR Trigger: TCTGCATCTGCTACTCAGCCAGCATTGGGGGCATTG...TGTCTCCGTGTGGTGTGCGTGGACGCTTGCGTGTGGTGTGGCCTGAGGGCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR GCA 90 bp | AAAGAGATCTGGAGGCCTAGCTGGGAGTCAGAGGGCGGGCGCGGTTGCCATGCACTCCTTCTGGGGACTTaGTTCCTGGAGCTCAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: KEIWRPSWESEGGRGCHALLLGT*FLELKG Trigger: TCCTTTGAGCTCCAGGAAGCAAGTCCCCAGAAGGAG...TGCATGGCAACCGCGCCCGCCCTCTGACTCCCAGCTAGGCCTCCAGATCTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | TGCTCTGGGAACGGGGAGGCCGGTTTTCCCAAAGGCACGCAGGGACTGGCAGCTTGGGGACTTGCTTCCTaGAGCTCAAAGGAAGGGTTA | + |
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Preference number: 4 (lower is better) Translates to: CSGNGEAGFPKGTQGLAAWGLAS*SSKEGL Trigger: TAACCCTTCCTTTGAGCTCCAGGAAGCAAGTCCCCA...AGCTGCCAGTCCCTGCGTGCCTTTGGGAAAACCGGCCTCCCCGTTCCCAGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | TGCTCTGGGAACGGGGAGGCCGGTTTTCCCAAAGGCACGCAGGGACTGGCAGCTGCAGCAAGATCACCATaGTGGGGAAGGCAAAACCAA | + |
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Preference number: 4 (lower is better) Translates to: CSGNGEAGFPKGTQGLAAAARSP*WGRQNQ Trigger: TTGGTTTTGCCTTCCCCACCATGGTGATCTTGCTGC...AGCTGCCAGTCCCTGCGTGCCTTTGGGAAAACCGGCCTCCCCGTTCCCAGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR TCA 90 bp | AGTCACTGCAACATTGCTGGGTGGCTGCGCCCACTCCAAACGGTCTGGCAGGGGTGCTCTTTGGTCTTCTaGGCTCTTGGCTCCGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SHCNIAGWLRPLQTVWQGCSLVF*ALGSEE Trigger: TTCTTCGGAGCCAAGAGCTCAGAAGACCAAAGAGCA...CCCCTGCCAGACCGTTTGGAGTGGGCGCAGCCACCCAGCAATGTTGCAGTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR TCA 90 bp | GGCCGGTTTTCCCAAAGGCACGCAGGGACTGGCAGCTCCCAATTAGCCACTGGTTGCTGGTGCACTCAGTaGAGATGGCCACCAATAGAG | + |
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Preference number: 4 (lower is better) Translates to: GRFSQRHAGTGSSQLATGCWCTQ*RWPPIE Trigger: CTCTATTGGTGGCCATCTTCACTGAGTGCACCAGCA...ACCAGTGGCTAATTGGGAGCTGCCAGTCCCTGCGTGCCTTTGGGAAAACCGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR GCA 90 bp | ATGTCCAGGGAGTGCTCTGGGAACGGGGAGGCCGGTTTTCCCAAAGGCACGCAGATTGAGCAGGAATCCTaGACGGGCCATATCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: MSRECSGNGEAGFPKGTQIEQES*TGHIRH Trigger: GTGTCTGATATGGCCCGTGCAGGATTCCTGCTCAAT...CTGCGTGCCTTTGGGAAAACCGGCCTCCCCGTTCCCAGAGCACTCCCTGGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| 3UTR CAA 72 bp | AGCTCCCAATTAGCCACTGGTGAAGTCACTGCAACATaGCTGGGTGGCTGCGCCCACTCCAAACGGTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SSQLATGEVTAT*LGGCAHSKRSG Trigger: GCCAGACCGTTTGGAGTGGGCGCAGCCACCCAGCAATGTTGCAGTGACTTCACCAGTGGCTAATTGGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR TCA 90 bp | TGCTCTGGGAACGGGGAGGCCGGTTTTCCCAAAGGCACGCAGGGACTGGCAGCTGGCAAAACCAAACCATaGAGCAAAGTTCACCACGTT | + |
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Preference number: 4 (lower is better) Translates to: CSGNGEAGFPKGTQGLAAGKTKP*SKVHHV Trigger: AACGTGGTGAACTTTGCTTCATGGTTTGGTTTTGCC...AGCTGCCAGTCCCTGCGTGCCTTTGGGAAAACCGGCCTCCCCGTTCCCAGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR TCA 90 bp | ACTGAGGAGCCCTCAGGCCACACCACACGCAAGCGTCCACGCACACCACACGGACCATATCAGACACTTTaGGGCCTCCAAAAGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TEEPSGHTTRKRPRTPHGPYQTL*GLQKRR Trigger: TCTTCTCTTTTGGAGGCCTCAAAGTGTCTGATATGG...TCCGTGTGGTGTGCGTGGACGCTTGCGTGTGGTGTGGCCTGAGGGCTCCTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | TCCAAACGGTCTGGCAGGGGTGCGCGACCTCTGCTTCCAGGCCCTGAACACCGGAGTTTGGACAATGAGTaGCAGAGGCAACAGGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: SKRSGRGARPLLPGPEHRSLDNE*QRQQEN Trigger: ATTTTCCTGTTGCCTCTGCCACTCATTGTCCAAACT...CCGGTGTTCAGGGCCTGGAAGCAGAGGTCGCGCACCCCTGCCAGACCGTTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | GGCCGGTTTTCCCAAAGGCACGCAGGGACTGGCAGCTCCCAATTAGCCACTGGTGCAAGATCACCATGGTaGGGAAGGCAAAACCAAACC | + |
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Preference number: 4 (lower is better) Translates to: GRFSQRHAGTGSSQLATGARSPW*GRQNQT Trigger: GGTTTGGTTTTGCCTTCCCCACCATGGTGATCTTGC...ACCAGTGGCTAATTGGGAGCTGCCAGTCCCTGCGTGCCTTTGGGAAAACCGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR TCA 90 bp | AGACACGAGCATCTTCCTCTTCACCGGAGAGCACACATACAGGATGTAGGCAAATCACTGTCTTCCAGGTaGGGATGGCAGGAGGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: RHEHLPLHRRAHIQDVGKSLSSR*GWQEEP Trigger: AGGCTCCTCCTGCCATCCTCACCTGGAAGACAGTGA...TTTGCCTACATCCTGTATGTGTGCTCTCCGGTGAAGAGGAAGATGCTCGTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR GCA 90 bp | CACACCCGGACTCTACTGAAAAAGCCTTTAATGAACCTTGGAGTTCCTGCTCCCACCTGGAAGGCAGCCTaGTTCCGTTCCTCTTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: HTRTLLKKPLMNLGVPAPTWKAA*FRSSSP Trigger: AGGGGAAGAGGAACGGAAGCAGGCTGCCTTCCAGGT...GGGAGCAGGAACTCCAAGGTTCATTAAAGGCTTTTTCAGTAGAGTCCGGGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | CACACCCGGACTCTACTGAAAAAGCCTTTAATGAACCTTGGAGTTCCTGCTCCCGAGGCAACAGGAAAATaGGCAGACATAGCACAATCA | + |
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Preference number: 4 (lower is better) Translates to: HTRTLLKKPLMNLGVPAPEATGK*ADIAQS Trigger: TGATTGTGCTATGTCTGCCCATTTTCCTGTTGCCTC...GGGAGCAGGAACTCCAAGGTTCATTAAAGGCTTTTTCAGTAGAGTCCGGGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CCA 90 bp | TCTTCACCGGAGAGCACACATACAGGATGTAGGCAAACACACGAATACATGATTAAGATCGAGTTGACCTaGCCTTGGAGCACCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SSPESTHTGCRQTHEYMIKIELT*PWSTRL Trigger: CAACCTGGTGCTCCAAGGCCAGGTCAACTCGATCTT...AATCATGTATTCGTGTGTTTGCCTACATCCTGTATGTGTGCTCTCCGGTGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR TCA 90 bp | TCTTCACCGGAGAGCACACATACAGGATGTAGGCAAACACACGAATACATGATTGGACAAACAGGAAAGTaGCAGCCTTCTCTGCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: SSPESTHTGCRQTHEYMIGQTGK*QPSLQN Trigger: GTTTTGCAGAGAAGGCTGTCACTTTCCTGTTTGTCC...AATCATGTATTCGTGTGTTTGCCTACATCCTGTATGTGTGCTCTCCGGTGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CAA 90 bp | ACTGAGGAGCCCTCAGGCCACACCACACGCAAGCGTCCACGCACACCACACGGACGAGTTGACCTGGCCTaGGAGCACCAGGTTGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: TEEPSGHTTRKRPRTPHGRVDLA*EHQVGC Trigger: ACACCCAACCTGGTGCTCCAAGGCCAGGTCAACTCG...TCCGTGTGGTGTGCGTGGACGCTTGCGTGTGGTGTGGCCTGAGGGCTCCTCAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CAA 90 bp | AAGAGATCTGGAGGCCTAGCTGGGAGTCAGAGGGCGGGCGCGGTTGCCATGCATAGCCTGTGCTGGGTCTaGATGACCTGGAAGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: KRSGGLAGSQRAGAVAMHSLCWV*MTWKAA Trigger: GGCTGCCTTCCAGGTCATCAAGACCCAGCACAGGCT...ATGCATGGCAACCGCGCCCGCCCTCTGACTCCCAGCTAGGCCTCCAGATCTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CAA 90 bp | TGGAGGCCTAGCTGGGAGTCAGAGGGCGGGCGCGGTTGCCATGCATACAACTACGATTCCTCACTGCCTTaGGCCAGGGCAAAGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: WRPSWESEGGRGCHAYNYDSSLP*ARAKPP Trigger: TGGGGGCTTTGCCCTGGCCAAAGGCAGTGAGGAATC...GTAGTTGTATGCATGGCAACCGCGCCCGCCCTCTGACTCCCAGCTAGGCCTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CAA 90 bp | ACGGGGAGGCCGGTTTTCCCAAAGGCACGCAGGGACTGGCAGCTCCCAATTAGCTGCAGCGGGGTCAGTTaGTCTCCCAGCCACTTAGAC | + |
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Preference number: 5 (lower is better) Translates to: TGRPVFPKARRDWQLPISCSGVS*SPSHLD Trigger: GTCTAAGTGGCTGGGAGACAAACTGACCCCGCTGCA...GCTAATTGGGAGCTGCCAGTCCCTGCGTGCCTTTGGGAAAACCGGCCTCCCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CAA 90 bp | TGCTCTGGGAACGGGGAGGCCGGTTTTCCCAAAGGCACGCAGGGACTGGCAGCTGGAAATGTGTCCAGCTaGAAGATAGGGATACTCCAG | + |
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Preference number: 5 (lower is better) Translates to: CSGNGEAGFPKGTQGLAAGNVSS*KIGILQ Trigger: CTGGAGTATCCCTATCTTCAAGCTGGACACATTTCC...AGCTGCCAGTCCCTGCGTGCCTTTGGGAAAACCGGCCTCCCCGTTCCCAGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS GCA 90 bp | GGGTTACTATTGCCTTCCTCCACATCCTTTTGTGAGCCCTGCAGCTaGTCCAGGACTGCATACCCGATGGGCAGCATCATGGCTGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: GLLLPSSTSFCEPCS*SRTAYPMGSIMAVV Trigger: CACCACAGCCATGATGCTGCCCATCGGGTATGCAGTCCTGGAGCAGCTGCAGGGCTCACAAAAGGATGTGGAGGAAGGCAATAGTAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CAA 90 bp | AGGCCGGTTTTCCCAAAGGCACGCAGGGACTGGCAGCTCCCAATTAGCCACTGGGTAGGCTTCCTTAGTTaGGACAATGAGTGGCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: RPVFPKARRDWQLPISHWVGFLS*DNEWQR Trigger: CCTCTGCCACTCATTGTCCAAACTAAGGAAGCCTAC...CCAGTGGCTAATTGGGAGCTGCCAGTCCCTGCGTGCCTTTGGGAAAACCGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CAA 90 bp | ACTGAGGAGCCCTCAGGCCACACCACACGCAAGCGTCCACGCACACCACACGGAAAGGAAGGGTTACTATaGCCTTCCTCCACATCCTTT | + |
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Preference number: 5 (lower is better) Translates to: TEEPSGHTTRKRPRTPHGKEGLL*PSSTSF Trigger: AAAGGATGTGGAGGAAGGCAATAGTAACCCTTCCTT...TCCGTGTGGTGTGCGTGGACGCTTGCGTGTGGTGTGGCCTGAGGGCTCCTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS GCA 90 bp | ACCAATAGAGAGAGGATGAGCACGGTGGCTGATGGCGGTACGTGCTaGAGCGGGGTCAGTTTGTCTCCCAGCCACTTAGACAAACCTGAT | + |
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Preference number: 5 (lower is better) Translates to: TNRERMSTVADGGTC*SGVSLSPSHLDKPD Trigger: ATCAGGTTTGTCTAAGTGGCTGGGAGACAAACTGACCCCGCTGCAGCACGTACCGCCATCAGCCACCGTGCTCATCCTCTCTCTATTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CAA 90 bp | AGGCACGCAGGGACTGGCAGCTCCCAATTAGCCACTGGTGAAGTCACTGCAACAAGCACTCCGATGATATaGAGCAGGAATCCTGCACGG | + |
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Preference number: 5 (lower is better) Translates to: RHAGTGSSQLATGEVTATSTPMI*SRNPAR Trigger: CCGTGCAGGATTCCTGCTCAATATCATCGGAGTGCT...TGTTGCAGTGACTTCACCAGTGGCTAATTGGGAGCTGCCAGTCCCTGCGTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS TCA 90 bp | GAGCTCAAAGGAAGGGTTACTATTGCCTTCCTCCACATCCTTTTGTaGGCCCTGCAGCTGCTCCAGGACTGCATACCCGATGGGCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: ELKGRVTIAFLHILL*ALQLLQDCIPDGQH Trigger: ATGCTGCCCATCGGGTATGCAGTCCTGGAGCAGCTGCAGGGCTCACAAAAGGATGTGGAGGAAGGCAATAGTAACCCTTCCTTTGAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS GCA 90 bp | AAGGAAGGGTTACTATTGCCTTCCTCCACATCCTTTTGTGAGCCCTaGAGCTGCTCCAGGACTGCATACCCGATGGGCAGCATCATGGCT | + |
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Preference number: 5 (lower is better) Translates to: KEGLLLPSSTSFCEP*SCSRTAYPMGSIMA Trigger: AGCCATGATGCTGCCCATCGGGTATGCAGTCCTGGAGCAGCTGCAGGGCTCACAAAAGGATGTGGAGGAAGGCAATAGTAACCCTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CAA 90 bp | ATGTCCAGGGAGTGCTCTGGGAACGGGGAGGCCGGTTTTCCCAAAGGCACGCAGAATATGTTGGTGTCCTaGAAGTACTCTAAGCAGACC | + |
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Preference number: 5 (lower is better) Translates to: MSRECSGNGEAGFPKGTQNMLVS*KYSKQT Trigger: GGTCTGCTTAGAGTACTTCAAGGACACCAACATATT...CTGCGTGCCTTTGGGAAAACCGGCCTCCCCGTTCCCAGAGCACTCCCTGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS TCA 90 bp | ATGAAGCAAAGTTCACCACGTTACTATTTTCAGGGAAGATCGAGTTaGCCTGGCCTTGGAGCACCAGGTTGGGTGTGGTACCCGTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: MKQSSPRYYFQGRSS*PGLGAPGWVWYPSG Trigger: CCCTGACGGGTACCACACCCAACCTGGTGCTCCAAGGCCAGGTCAACTCGATCTTCCCTGAAAATAGTAACGTGGTGAACTTTGCTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS GCA 90 bp | TACAGCCTGACCGTTATCAAGCTTGGTCTCCTCCTTCTGGGGACTTaGTTCCTGGAGCTCAAAGGAAGGGTTACTATTGCCTTCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: YSLTVIKLGLLLLGT*FLELKGRVTIAFLH Trigger: GTGGAGGAAGGCAATAGTAACCCTTCCTTTGAGCTCCAGGAAGCAAGTCCCCAGAAGGAGGAGACCAAGCTTGATAACGGTCAGGCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CAA 90 bp | ACACATACAGGATGTAGGCAAACACACGAATACATGATTTCGCATGCGCCAGCCCCTCCTTCTGGGGACTaGCTTCCTGGAGCTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: THTGCRQTHEYMISHAPAPPSGD*LPGAQR Trigger: CCTTTGAGCTCCAGGAAGCAAGTCCCCAGAAGGAGG...GGCTGGCGCATGCGAAATCATGTATTCGTGTGTTTGCCTACATCCTGTATGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS-3UTR CAA 90 bp | GCATCTTCCTCTTCACCGGAGAGCACACATACAGGATGTAGGCAAACACACGAAGTTAGTCCTGGAATCTaGGAGGGTATGATGAACATA | + |
|
Preference number: 5 (lower is better) Translates to: ASSSSPESTHTGCRQTHEVSPGI*EGMMNI Trigger: TATGTTCATCATACCCTCCAAGATTCCAGGACTAAC...TTCGTGTGTTTGCCTACATCCTGTATGTGTGCTCTCCGGTGAAGAGGAAGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 72 bp | GGGAAGATCGAGTTGACCTGGCCTTGGAGCACCAGGTaGGGTGTGGTACCCGTCAGGGTGGCAATGCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GKIELTWPWSTR*GVVPVRVAMPP Trigger: TGGGGGCATTGCCACCCTGACGGGTACCACACCCAACCTGGTGCTCCAAGGCCAGGTCAACTCGATCTTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS GCA 72 bp | GAGAGGATGAGCACGGTGGCTGATGGCGGTACGTGCTaGAGCGGGGTCAGTTTGTCTCCCAGCCACTTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ERMSTVADGGTC*SGVSLSPSHLD Trigger: GTCTAAGTGGCTGGGAGACAAACTGACCCCGCTGCAGCACGTACCGCCATCAGCCACCGTGCTCATCCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS TCA 72 bp | TGTCACCCCAGCCTGGGAAGAAGCCCGGCTCCCTCGTaGACCAGAGCACCACTAGCAGGACAAACAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: CHPSLGRSPAPS*TRAPLAGQTGK Trigger: CTTTCCTGTTTGTCCTGCTAGTGGTGCTCTGGTTCACGAGGGAGCCGGGCTTCTTCCCAGGCTGGGGTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 90 bp | CTATTTTCAGGGAAGATCGAGTTGACCTGGCCTTGGAGCACCAGGTaGGGTGTGGTACCCGTCAGGGTGGCAATGCCCCCAATGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LFSGKIELTWPWSTR*GVVPVRVAMPPMLA Trigger: AGCCAGCATTGGGGGCATTGCCACCCTGACGGGTACCACACCCAACCTGGTGCTCCAAGGCCAGGTCAACTCGATCTTCCCTGAAAATAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CCA 72 bp | TTCTCTGCAAAACTCATGGGGCCCAGCAGCCTGTGCTaGGTCTTGATGACCTGGAAGGCAGCCTGCTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: FSAKLMGPSSLC*VLMTWKAACFR Trigger: ACGGAAGCAGGCTGCCTTCCAGGTCATCAAGACCCAGCACAGGCTGCTGGGCCCCATGAGTTTTGCAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 72 bp | CCCAGCCACTTAGACAAACCTGATTCCTCACTGCCTTaGGCCAGGGCAAAGCCCCCACCCAGCAAGATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSHLDKPDSSLP*ARAKPPPSKIR Trigger: CCTGATCTTGCTGGGTGGGGGCTTTGCCCTGGCCAAAGGCAGTGAGGAATCAGGTTTGTCTAAGTGGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 90 bp | ATGAGCACGGTGGCTGATGGCGGTACGTGCTGCAGCGGGGTCAGTTaGTCTCCCAGCCACTTAGACAAACCTGATTCCTCACTGCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: MSTVADGGTCCSGVS*SPSHLDKPDSSLPL Trigger: CAAAGGCAGTGAGGAATCAGGTTTGTCTAAGTGGCTGGGAGACAAACTGACCCCGCTGCAGCACGTACCGCCATCAGCCACCGTGCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS GCA 72 bp | TTGCCTTCCTCCACATCCTTTTGTGAGCCCTGCAGCTaGTCCAGGACTGCATACCCGATGGGCAGCATCATG | + |
|
Preference number: 6 (lower is better) Translates to: LPSSTSFCEPCS*SRTAYPMGSIM Trigger: CATGATGCTGCCCATCGGGTATGCAGTCCTGGAGCAGCTGCAGGGCTCACAAAAGGATGTGGAGGAAGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 72 bp | GTGGCTGATGGCGGTACGTGCTGCAGCGGGGTCAGTTaGTCTCCCAGCCACTTAGACAAACCTGATTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VADGGTCCSGVS*SPSHLDKPDSS Trigger: TGAGGAATCAGGTTTGTCTAAGTGGCTGGGAGACAAACTGACCCCGCTGCAGCACGTACCGCCATCAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 90 bp | GCCATATCAGACACTTTGAGGCCTCCAAAAGAGAAGACAATGGCGTaGGGTGGAGTGGCCACGGGTAGCATGAAAGCTAGGGAGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AISDTLRPPKEKTMA*GGVATGSMKAREAA Trigger: GGCTGCCTCCCTAGCTTTCATGCTACCCGTGGCCACTCCACCCAACGCCATTGTCTTCTCTTTTGGAGGCCTCAAAGTGTCTGATATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS TCA 72 bp | TGGCTGAGTAGCAGATGCAGAGACTCAGGCCCTGGCTaGAGCGGTGATGCTCTTTGGTCTTCTGAGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: WLSSRCRDSGPG*SGDALWSSELL Trigger: CAAGAGCTCAGAAGACCAAAGAGCATCACCGCTTCAGCCAGGGCCTGAGTCTCTGCATCTGCTACTCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS GCA 72 bp | TTACTATTGCCTTCCTCCACATCCTTTTGTGAGCCCTaGAGCTGCTCCAGGACTGCATACCCGATGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLLPSSTSFCEP*SCSRTAYPMGS Trigger: GCTGCCCATCGGGTATGCAGTCCTGGAGCAGCTGCAGGGCTCACAAAAGGATGTGGAGGAAGGCAATAGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 90 bp | TGCTCCACGGCGATGGCCACCATCAGACCCCCGACGAACAATATGTaGGTGTCCTTGAAGTACTCTAAGCAGACCTTGGAGGCTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: CSTAMATIRPPTNNM*VSLKYSKQTLEASM Trigger: CATGGAAGCCTCCAAGGTCTGCTTAGAGTACTTCAAGGACACCAACATATTGTTCGTCGGGGGTCTGATGGTGGCCATCGCCGTGGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CCA 72 bp | TTACTATTTTCAGGGAAGATCGAGTTGACCTGGCCTTaGAGCACCAGGTTGGGTGTGGTACCCGTCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLFSGKIELTWP*STRLGVVPVRV Trigger: CACCCTGACGGGTACCACACCCAACCTGGTGCTCCAAGGCCAGGTCAACTCGATCTTCCCTGAAAATAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CCA 72 bp | ACCACGTTACTATTTTCAGGGAAGATCGAGTTGACCTaGCCTTGGAGCACCAGGTTGGGTGTGGTACCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: TTLLFSGKIELT*PWSTRLGVVPV Trigger: GACGGGTACCACACCCAACCTGGTGCTCCAAGGCCAGGTCAACTCGATCTTCCCTGAAAATAGTAACGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 72 bp | GTTACTATTTTCAGGGAAGATCGAGTTGACCTGGCCTaGGAGCACCAGGTTGGGTGTGGTACCCGTCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: VTIFREDRVDLA*EHQVGCGTRQG Trigger: ACCCTGACGGGTACCACACCCAACCTGGTGCTCCAAGGCCAGGTCAACTCGATCTTCCCTGAAAATAGTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 72 bp | GACACTTTGAGGCCTCCAAAAGAGAAGACAATGGCGTaGGGTGGAGTGGCCACGGGTAGCATGAAAGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: DTLRPPKEKTMA*GGVATGSMKAR Trigger: CCTAGCTTTCATGCTACCCGTGGCCACTCCACCCAACGCCATTGTCTTCTCTTTTGGAGGCCTCAAAGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 90 bp | AGTTTGTCTCCCAGCCACTTAGACAAACCTGATTCCTCACTGCCTTaGGCCAGGGCAAAGCCCCCACCCAGCAAGATCAGGATATTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLSPSHLDKPDSSLP*ARAKPPPSKIRIFQ Trigger: CTGGAATATCCTGATCTTGCTGGGTGGGGGCTTTGCCCTGGCCAAAGGCAGTGAGGAATCAGGTTTGTCTAAGTGGCTGGGAGACAAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 72 bp | GCGATGGCCACCATCAGACCCCCGACGAACAATATGTaGGTGTCCTTGAAGTACTCTAAGCAGACCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AMATIRPPTNNM*VSLKYSKQTLE Trigger: CTCCAAGGTCTGCTTAGAGTACTTCAAGGACACCAACATATTGTTCGTCGGGGGTCTGATGGTGGCCATCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 90 bp | CATGAAGCAAAGTTCACCACGTTACTATTTTCAGGGAAGATCGAGTaGACCTGGCCTTGGAGCACCAGGTTGGGTGTGGTACCCGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: HEAKFTTLLFSGKIE*TWPWSTRLGVVPVR Trigger: CCTGACGGGTACCACACCCAACCTGGTGCTCCAAGGCCAGGTCAACTCGATCTTCCCTGAAAATAGTAACGTGGTGAACTTTGCTTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 90 bp | ATACAGCCTGACCGTTATCAAGCTTGGTCTCCTCCTTCTGGGGACTaGCTTCCTGGAGCTCAAAGGAAGGGTTACTATTGCCTTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: IQPDRYQAWSPPSGD*LPGAQRKGYYCLPP Trigger: TGGAGGAAGGCAATAGTAACCCTTCCTTTGAGCTCCAGGAAGCAAGTCCCCAGAAGGAGGAGACCAAGCTTGATAACGGTCAGGCTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CCA 72 bp | GCTGAAGCGGTGATGCTCTTTGGTCTTCTGAGCTCTTaGCTCCGAAGAAACAGATACAGCCTGACCGTTATC | + |
|
Preference number: 6 (lower is better) Translates to: AEAVMLFGLLSS*LRRNRYSLTVI Trigger: GATAACGGTCAGGCTGTATCTGTTTCTTCGGAGCCAAGAGCTCAGAAGACCAAAGAGCATCACCGCTTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 72 bp | TTGAGCAGGAATCCTGCACGGGCCATATCAGACACTTaGAGGCCTCCAAAAGAGAAGACAATGGCGTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSRNPARAISDT*RPPKEKTMALG Trigger: ACCCAACGCCATTGTCTTCTCTTTTGGAGGCCTCAAAGTGTCTGATATGGCCCGTGCAGGATTCCTGCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS GCA 72 bp | GATAGTCAGCACTCCGATGATATTGAGCAGGAATCCTaGACGGGCCATATCAGACACTTTGAGGCCTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: DSQHSDDIEQES*TGHIRHFEASK Trigger: TTTGGAGGCCTCAAAGTGTCTGATATGGCCCGTGCAGGATTCCTGCTCAATATCATCGGAGTGCTGACTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 72 bp | AAGTTCACCACGTTACTATTTTCAGGGAAGATCGAGTaGACCTGGCCTTGGAGCACCAGGTTGGGTGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: KFTTLLFSGKIE*TWPWSTRLGVV Trigger: TACCACACCCAACCTGGTGCTCCAAGGCCAGGTCAACTCGATCTTCCCTGAAAATAGTAACGTGGTGAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 90 bp | CTCCAGCTGTTTATGGATAATGTGATAGTCAGCACTCCGATGATATaGAGCAGGAATCCTGCACGGGCCATATCAGACACTTTGAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LQLFMDNVIVSTPMI*SRNPARAISDTLRP Trigger: AGGCCTCAAAGTGTCTGATATGGCCCGTGCAGGATTCCTGCTCAATATCATCGGAGTGCTGACTATCACATTATCCATAAACAGCTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 72 bp | AATATGTTGGTGTCCTTGAAGTACTCTAAGCAGACCTaGGAGGCTTCCATGATACCCATCAAAGGGAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NMLVSLKYSKQT*EASMIPIKGKR Trigger: CCTCTTCCCTTTGATGGGTATCATGGAAGCCTCCAAGGTCTGCTTAGAGTACTTCAAGGACACCAACATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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| CDS CAA 72 bp | TTTATGGATAATGTGATAGTCAGCACTCCGATGATATaGAGCAGGAATCCTGCACGGGCCATATCAGACACT | + |
|
Preference number: 6 (lower is better) Translates to: FMDNVIVSTPMI*SRNPARAISDT Trigger: AGTGTCTGATATGGCCCGTGCAGGATTCCTGCTCAATATCATCGGAGTGCTGACTATCACATTATCCATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001122.6 |
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