Pregenerated sensors for SLC13A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029700Ensembl transcript IDs: ENSMUST00000031713.9
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGTCTCCACCTTAGTTTCTGGACGAAGGCGGGTAGATGCTCTTTaGTTGGGTTTGAAAAGATACGGACTCTGTATTAAGATGCTGACA | + |
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Preference number: 1 (lower is better) Translates to: AVSTLVSGRRRVDAL*LGLKRYGLCIKMLT Trigger: TGTCAGCATCTTAATACAGAGTCCGTATCTTTTCAAACCCAATCAAAGAGCATCTACCCGCCTTCGTCCAGAAACTAAGGTGGAGACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| 3UTR GCA 90 bp | ATGTGTGAGGCATGTTCTGCGATTGCCGTAGCTGTATCGATGATTTaGATGTGCCAGTCCTATACAGCTACATTGTACAGTCAATTCTTA | + |
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Preference number: 1 (lower is better) Translates to: MCEACSAIAVAVSMI*MCQSYTATLYSQFL Trigger: TAAGAATTGACTGTACAATGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGCAGAACATGCCTCACACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGGTTTGAAAAGATACGGACTCTGTATTAAGATGCTGACAAGGGGCATGTGTGTCCTAAAGTCACCATaGACTGGTAGCTCTTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LGLKRYGLCIKMLTRGMCVLKSP*TGSSCV Trigger: CACACAAGAGCTACCAGTTCATGGTGACTTTAGGAC...ACACATGCCCCTTGTCAGCATCTTAATACAGAGTCCGTATCTTTTCAAACCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| 3UTR GCA 72 bp | GCATGTTCTGCGATTGCCGTAGCTGTATCGATGATTTaGATGTGCCAGTCCTATACAGCTACATTGTACAGT | + |
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Preference number: 3 (lower is better) Translates to: ACSAIAVAVSMI*MCQSYTATLYS Trigger: ACTGTACAATGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGCAGAACATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| 3UTR CCA 72 bp | AGCATCATTTTTATGGAGAAAGAGCAAGCACATAGATaGTCTGCCAGTGCAGTCTCCACCTTAGTTTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: SIIFMEKEQAHR*SASAVSTLVSG Trigger: TCCAGAAACTAAGGTGGAGACTGCACTGGCAGACCATCTATGTGCTTGCTCTTTCTCCATAAAAATGATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| 3UTR TCA 72 bp | ACCTTAGTTTCTGGACGAAGGCGGGTAGATGCTCTTTaGTTGGGTTTGAAAAGATACGGACTCTGTATTAAG | + |
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Preference number: 3 (lower is better) Translates to: TLVSGRRRVDAL*LGLKRYGLCIK Trigger: CTTAATACAGAGTCCGTATCTTTTCAAACCCAATCAAAGAGCATCTACCCGCCTTCGTCCAGAAACTAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| 3UTR TCA 72 bp | TTTTCAAATAATAAGTTGATGTTTGCAATGTTACACTaGACTCCAAGTTTAAGATGCGGTGAATGGCCTAAC | + |
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Preference number: 3 (lower is better) Translates to: FSNNKLMFAMLH*TPSLRCGEWPN Trigger: GTTAGGCCATTCACCGCATCTTAAACTTGGAGTTCAGTGTAACATTGCAAACATCAACTTATTATTTGAAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CCA 90 bp | GCATGTTCTGCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATCAACGTCAGCCAGGCTaGATTCACCCCCACCATCAT | + |
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Preference number: 4 (lower is better) Translates to: ACSAIAVAVSMICMCQSYQRQPG*IHPHHH Trigger: ATGATGGTGGGGGTGAATCCAGCCTGGCTGACGTTG...ATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGCAGAACATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR TCA 90 bp | TTGGGTTTGAAAAGATACGGACTCTGTATTAAGATGCTGACAAGGGGCATGTGTAGGCAGTGCTGCTCATaGACCCCAACGTCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGLKRYGLCIKMLTRGMCRQCCS*TPTSAR Trigger: CCTGGCTGACGTTGGGGTTCATGAGCAGCACTGCCT...ACACATGCCCCTTGTCAGCATCTTAATACAGAGTCCGTATCTTTTCAAACCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR TCA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACAACCAGGAACCAAAGTTaGGGCAGCGACAATCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: AIAVAVSMICMCQSYTATTRNQS*GSDNQG Trigger: ACCCTGATTGTCGCTGCCTCAACTTTGGTTCCTGGT...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR TCA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACACCTGTGAAGAACGCATaGTCCCAAACATGGGGAACA | + |
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Preference number: 4 (lower is better) Translates to: AIAVAVSMICMCQSYTATPVKNA*SQTWGT Trigger: TGTTCCCCATGTTTGGGATCATGCGTTCTTCACAGG...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR TCA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACAGGGCGGCAGATTCATTaGAATAAGTCATCTGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: AIAVAVSMICMCQSYTATGRQIH*NKSSEW Trigger: CCACTCAGATGACTTATTTCAATGAATCTGCCGCCC...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR TCA 90 bp | TTGGGTTTGAAAAGATACGGACTCTGTATTAAGATGCTGACAAGGGGCATGTGTTGGTGGAGGTACCCGTaGTTGTTGTCAGCCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: LGLKRYGLCIKMLTRGMCWWRYP*LLSAHQ Trigger: TTGGTGGGCTGACAACAATCACGGGTACCTCCACCA...ACACATGCCCCTTGTCAGCATCTTAATACAGAGTCCGTATCTTTTCAAACCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR TCA 90 bp | GCATGTTCTGCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATCAGGGTAGCGCGTATTaGAATGCTCAGAGAAGATCA | + |
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Preference number: 4 (lower is better) Translates to: ACSAIAVAVSMICMCQSYQGSAY*NAQRRS Trigger: TGATCTTCTCTGAGCATTTCAATACGCGCTACCCTG...ATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGCAGAACATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR TCA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACAGTCCCAGGGCATGAATaGCTGGAATTCTTTCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: AIAVAVSMICMCQSYTATVPGHE*LEFFPS Trigger: ACTTGGAAAGAATTCCAGTCATTCATGCCCTGGGAC...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR TCA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACACTATGTCCCAGGGCATaGATGACTGGAATTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: AIAVAVSMICMCQSYTATLCPRA*MTGILS Trigger: GGAAAGAATTCCAGTCATTCATGCCCTGGGACATAG...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR TCA 90 bp | TTGGGTTTGAAAAGATACGGACTCTGTATTAAGATGCTGACAAGGGGCATGTGTGATAGTCCTGATACCTaGCAGCCATCTGCCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LGLKRYGLCIKMLTRGMCDSPDT*QPSARA Trigger: TGCCCTGGCAGATGGCTGTCAGGTATCAGGACTATC...ACACATGCCCCTTGTCAGCATCTTAATACAGAGTCCGTATCTTTTCAAACCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR TCA 90 bp | TTGGGTTTGAAAAGATACGGACTCTGTATTAAGATGCTGACAAGGGGCATGTGTTCGGCTCGATCCAGGTaGACATGCCTAGCATCACCA | + |
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Preference number: 4 (lower is better) Translates to: LGLKRYGLCIKMLTRGMCSARSR*TCLASP Trigger: TGGTGATGCTAGGCATGTTCACCTGGATCGAGCCGA...ACACATGCCCCTTGTCAGCATCTTAATACAGAGTCCGTATCTTTTCAAACCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CCA 90 bp | GCATGTTCTGCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATAATGGTAATGGTAGCTaGGTTGCTGGCTACCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: ACSAIAVAVSMICMCQSYNGNGS*VAGYLC Trigger: ACAGAGGTAGCCAGCAACCCAGCTACCATTACCATT...ATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGCAGAACATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR TCA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACACAGAAGAAATGCAAATaGGGTACAGAGAGTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: AIAVAVSMICMCQSYTATQKKCK*GTESGR Trigger: CCTTCCACTCTCTGTACCTCATTTGCATTTCTTCTG...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CCA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACAGTCATGACTGCTTCCTaGAGCTGGTTTTGTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: AIAVAVSMICMCQSYTATVMTAS*SWFCFL Trigger: GAGAAAACAAAACCAGCTCCAGGAAGCAGTCATGAC...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CCA 90 bp | GCATGTTCTGCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATTTGTCAGCCCACCAATaGTTGAAGAGTAAGCAACAG | + |
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Preference number: 4 (lower is better) Translates to: ACSAIAVAVSMICMCQSYLSAHQ*LKSKQQ Trigger: CTGTTGCTTACTCTTCAACCATTGGTGGGCTGACAA...ATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGCAGAACATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| 3UTR CAA 72 bp | GGCATGTTCTGCGATTGCCGTAGCTGTATCGATGATTaGCATGTGCCAGTCCTATACAGCTACATTGTACAG | + |
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Preference number: 4 (lower is better) Translates to: GMFCDCRSCIDD*HVPVLYSYIVQ Trigger: CTGTACAATGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGCAGAACATGCC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR TCA 90 bp | GCATGTTCTGCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATGAAGGTGAAAGTCTTTaGAATAAGCAGAAGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: ACSAIAVAVSMICMCQSYEGESL*NKQKPP Trigger: AGGTGGCTTCTGCTTATTTCAAAGACTTTCACCTTC...ATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGCAGAACATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR TCA 90 bp | TTGGGTTTGAAAAGATACGGACTCTGTATTAAGATGCTGACAAGGGGCATGTGTACTTTCCCTTTGTCATaGCTGCTTCCTGGAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LGLKRYGLCIKMLTRGMCTFPLS*LLPGAG Trigger: ACCAGCTCCAGGAAGCAGTCATGACAAAGGGAAAGT...ACACATGCCCCTTGTCAGCATCTTAATACAGAGTCCGTATCTTTTCAAACCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR TCA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACATGTCTCCATCTTTCTTaGCACTTTCCCTTTGTCATG | + |
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Preference number: 4 (lower is better) Translates to: AIAVAVSMICMCQSYTATCLHLS*HFPFVM Trigger: CATGACAAAGGGAAAGTGTCAAGAAAGATGGAGACA...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CCA 90 bp | TTGGGTTTGAAAAGATACGGACTCTGTATTAAGATGCTGACAAGGGGCATGTGTAATAAGTCATCTGAGTaGCCTCGGCCTCTGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: LGLKRYGLCIKMLTRGMCNKSSE*PRPLLQ Trigger: CTGAAGCAGAGGCCGAGGCCACTCAGATGACTTATT...ACACATGCCCCTTGTCAGCATCTTAATACAGAGTCCGTATCTTTTCAAACCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CCA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACAATGAGGTACAGAGAGTaGAAGGCAGCAAAATCTGAA | + |
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Preference number: 4 (lower is better) Translates to: AIAVAVSMICMCQSYTATMRYRE*KAAKSE Trigger: TTCAGATTTTGCTGCCTTCCACTCTCTGTACCTCAT...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CCA 90 bp | GCATGTTCTGCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATAACAATAGCATTGGGTaGATTTGCAACTGGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ACSAIAVAVSMICMCQSYNNSIG*ICNWQK Trigger: CTTCTGCCAGTTGCAAATCCACCCAATGCTATTGTT...ATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGCAGAACATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR TCA 90 bp | TTGGGTTTGAAAAGATACGGACTCTGTATTAAGATGCTGACAAGGGGCATGTGTGCAAGGCCATTACAATaGAGATCACCAAGGTCACGA | + |
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Preference number: 4 (lower is better) Translates to: LGLKRYGLCIKMLTRGMCARPLQ*RSPRSR Trigger: TCGTGACCTTGGTGATCTTCATTGTAATGGCCTTGC...ACACATGCCCCTTGTCAGCATCTTAATACAGAGTCCGTATCTTTTCAAACCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CCA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACAGATGATGAGAGGGAGTaGCAAGAAAACCAAAATAGT | + |
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Preference number: 4 (lower is better) Translates to: AIAVAVSMICMCQSYTATDDERE*QENQNS Trigger: ACTATTTTGGTTTTCTTGCCACTCCCTCTCATCATC...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR GCA 90 bp | TTGGGTTTGAAAAGATACGGACTCTGTATTAAGATGCTGACAAGGGGCATGTGTAGCATTGGGTGGATTTaGAACTGGCAGAAGAAATGC | + |
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Preference number: 4 (lower is better) Translates to: LGLKRYGLCIKMLTRGMCSIGWI*NWQKKC Trigger: GCATTTCTTCTGCCAGTTGCAAATCCACCCAATGCT...ACACATGCCCCTTGTCAGCATCTTAATACAGAGTCCGTATCTTTTCAAACCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR TCA 90 bp | TTGGGTTTGAAAAGATACGGACTCTGTATTAAGATGCTGACAAGGGGCATGTGTATGTTGCTAAACAGATaGCTCCAATTAGCAGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: LGLKRYGLCIKMLTRGMCMLLNR*LQLAEG Trigger: ACCTTCTGCTAATTGGAGTCATCTGTTTAGCAACAT...ACACATGCCCCTTGTCAGCATCTTAATACAGAGTCCGTATCTTTTCAAACCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CAA 90 bp | GCATGTTCTGCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATAACCAGGAACCAAAGTaGAGGCAGCGACAATCAGGG | + |
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Preference number: 5 (lower is better) Translates to: ACSAIAVAVSMICMCQSYNQEPK*RQRQSG Trigger: CCCTGATTGTCGCTGCCTCAACTTTGGTTCCTGGTT...ATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGCAGAACATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CAA 90 bp | GCATGTTCTGCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATTCAGAGAAGATCAGGTaGGTGGAGGTACCCGTGATT | + |
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Preference number: 5 (lower is better) Translates to: ACSAIAVAVSMICMCQSYSEKIR*VEVPVI Trigger: AATCACGGGTACCTCCACCAACCTGATCTTCTCTGA...ATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGCAGAACATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CAA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACAGTAATGGTAGCTGGGTaGCTGGCTACCTCTGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: AIAVAVSMICMCQSYTATVMVAG*LATSVK Trigger: TTTGACAGAGGTAGCCAGCAACCCAGCTACCATTAC...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CAA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACACTGAAGAGGGTTCACTaGAATGGCTTCAGCCAAAGG | + |
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Preference number: 5 (lower is better) Translates to: AIAVAVSMICMCQSYTATLKRVH*NGFSQR Trigger: CCTTTGGCTGAAGCCATTCAAGTGAACCCTCTTCAG...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CAA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACAGCAGCAGTAGAGGTGTaGCTAAGCCACATAGATAAG | + |
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Preference number: 5 (lower is better) Translates to: AIAVAVSMICMCQSYTATAAVEV*LSHIDK Trigger: CTTATCTATGTGGCTTAGCAACACCTCTACTGCTGC...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CAA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACATCATGTGGTCCTTCCTaGACCGATATTTTGCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: AIAVAVSMICMCQSYTATSCGPS*TDILLL Trigger: CAGGAGCAAAATATCGGTCAAGGAAGGACCACATGA...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CAA 90 bp | TTGGGTTTGAAAAGATACGGACTCTGTATTAAGATGCTGACAAGGGGCATGTGTGAGGATGTAGGCACATaGTGCTTCCTTGGTGCGGAT | + |
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Preference number: 5 (lower is better) Translates to: LGLKRYGLCIKMLTRGMCEDVGT*CFLGAD Trigger: ATCCGCACCAAGGAAGCACAATGTGCCTACATCCTC...ACACATGCCCCTTGTCAGCATCTTAATACAGAGTCCGTATCTTTTCAAACCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CAA 90 bp | GCATGTTCTGCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATTCAGCCCACCAATGGTaGAAGAGTAAGCAACAGATA | + |
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Preference number: 5 (lower is better) Translates to: ACSAIAVAVSMICMCQSYSAHQW*KSKQQI Trigger: TATCTGTTGCTTACTCTTCAACCATTGGTGGGCTGA...ATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGCAGAACATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CAA 90 bp | GCATGTTCTGCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATCTCAGAGCGATCCTCTaGTGCAAATTCCATTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: ACSAIAVAVSMICMCQSYLRAIL*CKFHFS Trigger: AGAAAAATGGAATTTGCACAAGAGGATCGCTCTGAG...ATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGCAGAACATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CAA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACACTGTCTCCATCTTTCTaGACACTTTCCCTTTGTCAT | + |
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Preference number: 5 (lower is better) Translates to: AIAVAVSMICMCQSYTATLSPSF*TLSLCH Trigger: ATGACAAAGGGAAAGTGTCAAGAAAGATGGAGACAG...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS TCA 90 bp | TTGTCAGCCCACCAATGGTTGAAGAGTAAGCAACAGATAAACACATaGGCTTACACATCATGTGGTCCTTCCTTGACCGATATTTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: LSAHQWLKSKQQINT*AYTSCGPSLTDILL Trigger: GAGCAAAATATCGGTCAAGGAAGGACCACATGATGTGTAAGCTCATGTGTTTATCTGTTGCTTACTCTTCAACCATTGGTGGGCTGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CAA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACATTGGTTTTGCCACACTaGAACATCTTAAAGTCGAAT | + |
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Preference number: 5 (lower is better) Translates to: AIAVAVSMICMCQSYTATLVLPH*NILKSN Trigger: ATTCGACTTTAAGATGTTCAAGTGTGGCAAAACCAA...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CAA 90 bp | GCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATACAGCTACATTGAGTGTTTTGGTTTaGCCACACTTGAACATCTTA | + |
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Preference number: 5 (lower is better) Translates to: AIAVAVSMICMCQSYTATLSVLV*PHLNIL Trigger: TAAGATGTTCAAGTGTGGCAAAACCAAAACACTCAA...TGTAGCTGTATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS-3UTR CAA 90 bp | GCATGTTCTGCGATTGCCGTAGCTGTATCGATGATTTGCATGTGCCAGTCCTATTTTTCTTTGAGTGTTTaGGTTTTGCCACACTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: ACSAIAVAVSMICMCQSYFSLSV*VLPHLN Trigger: GTTCAAGTGTGGCAAAACCAAAACACTCAAAGAAAA...ATAGGACTGGCACATGCAAATCATCGATACAGCTACGGCAATCGCAGAACATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS GCA 72 bp | TTCATTGAAATAAGTCATCTGAGTGGCCTCGGCCTCTaGTTCAGCACTGATGATCTGCTGCGCCACAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: FIEISHLSGLGL*FSTDDLLRHSL Trigger: GAGGCTGTGGCGCAGCAGATCATCAGTGCTGAAGCAGAGGCCGAGGCCACTCAGATGACTTATTTCAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS TCA 72 bp | TTTCATCAATGTCCAGTCCGTGGGCGGCAGATTCATTaGAATAAGTCATCTGAGTGGCCTCGGCCTCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: FHQCPVRGRQIH*NKSSEWPRPLL Trigger: AAGCAGAGGCCGAGGCCACTCAGATGACTTATTTCAATGAATCTGCCGCCCACGGACTGGACATTGATGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS TCA 72 bp | AATTTACTCCCTATCCAGTTAGATAGTCCTGATACCTaGCAGCCATCTGCCAGGGCAAAGCCTCCACCAACA | + |
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Preference number: 6 (lower is better) Translates to: NLLPIQLDSPDT*QPSARAKPPPT Trigger: TGTTGGTGGAGGCTTTGCCCTGGCAGATGGCTGTCAGGTATCAGGACTATCTAACTGGATAGGGAGTAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS CAA 90 bp | GCCAAAGGAGATAATATTGGGAACAGAATGGTAATGGTAGCTGGGTaGCTGGCTACCTCTGTCAAAGATGTGACAATCAAGGAAGATATC | + |
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Preference number: 6 (lower is better) Translates to: AKGDNIGNRMVMVAG*LATSVKDVTIKEDI Trigger: GATATCTTCCTTGATTGTCACATCTTTGACAGAGGTAGCCAGCAACCCAGCTACCATTACCATTCTGTTCCCAATATTATCTCCTTTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS TCA 72 bp | CACCAATGGTTGAAGAGTAAGCAACAGATAAACACATaGGCTTACACATCATGTGGTCCTTCCTTGACCGAT | + |
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Preference number: 6 (lower is better) Translates to: HQWLKSKQQINT*AYTSCGPSLTD Trigger: ATCGGTCAAGGAAGGACCACATGATGTGTAAGCTCATGTGTTTATCTGTTGCTTACTCTTCAACCATTGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS CCA 72 bp | TGGAAGGCAGCAAAATCTGAAGAGGGTTCACTTGAATaGCTTCAGCCAAAGGAGATAATATTGGGAACAGAA | + |
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Preference number: 6 (lower is better) Translates to: WKAAKSEEGSLE*LQPKEIILGTE Trigger: TTCTGTTCCCAATATTATCTCCTTTGGCTGAAGCCATTCAAGTGAACCCTCTTCAGATTTTGCTGCCTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS CAA 72 bp | GATAATATTGGGAACAGAATGGTAATGGTAGCTGGGTaGCTGGCTACCTCTGTCAAAGATGTGACAATCAAG | + |
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Preference number: 6 (lower is better) Translates to: DNIGNRMVMVAG*LATSVKDVTIK Trigger: CTTGATTGTCACATCTTTGACAGAGGTAGCCAGCAACCCAGCTACCATTACCATTCTGTTCCCAATATTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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| CDS CAA 72 bp | ACCTTTGCACAAGCTTTTTCTTTGAGTGTTTTGGTTTaGCCACACTTGAACATCTTAAAGTCGAATCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: TFAQAFSLSVLV*PHLNILKSNPR Trigger: CCTAGGATTCGACTTTAAGATGTTCAAGTGTGGCAAAACCAAAACACTCAAAGAAAAAGCTTGTGCAAAGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031713.9 |
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