Pregenerated sensors for SLC12A9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037344Ensembl transcript IDs: ENSMUST00000039991.14, ENSMUST00000156646.3
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CACAGAAGAGGCCAGCCCCTCTGGTCAAGGCACCAGTaGAGGAAGCGGAGGAAGACCAGGGACAGGGCCGCA | + |
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Preference number: 3 (lower is better) Translates to: HRRGQPLWSRHQ*RKRRKTRDRAA Trigger: TGCGGCCCTGTCCCTGGTCTTCCTCCGCTTCCTTCACTGGTGCCTTGACCAGAGGGGCTGGCCTCTTCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| 3UTR-3UTR CAA 90 bp | ATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAAGGGGAGGGGCGTCCATaGCTCAGAATGAGCCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: MSVPPPKGDHGPLNTSSKGEGRP*LRMSLG Trigger: GCCCAGGCTCATTCTGAGCAATGGACGCCCCTCCCC...TTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | GGGGGAGGGGCGTCCATTGCTCAGAATGAGCCTGGGCCCGCTCTATCCAACCCTTCTTGGGCCAGCGCATaGAGGATCCGGGAGGCACCG | + |
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Preference number: 4 (lower is better) Translates to: GGGASIAQNEPGPALSNPSWASA*RIREAP Trigger: CGGTGCCTCCCGGATCCTGCATGCGCTGGCCCAAGA...AGGGTTGGATAGAGCGGGCCCAGGCTCATTCTGAGCAATGGACGCCCCTCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGGGCGTCCATTGCTCAGAATGAGCCTGGGCCCGCTCTATCCAACCCTGCTGAGCGCTGCTACTaGACCCCCGGCTTAGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: GGGASIAQNEPGPALSNPAERCY*TPGLAA Trigger: AGCGGCTAAGCCGGGGGTCCAGTAGCAGCGCTCAGC...AGGGTTGGATAGAGCGGGCCCAGGCTCATTCTGAGCAATGGACGCCCCTCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGGGCGTCCATTGCTCAGAATGAGCCTGGGCCCGCTCTATCCAACCCTCCCCAGGAGCCTCCCTaGGCCCCAAGCACAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: GGGASIAQNEPGPALSNPPQEPP*APSTGR Trigger: TCTTCCTGTGCTTGGGGCCCAGGGAGGCTCCTGGGG...AGGGTTGGATAGAGCGGGCCCAGGCTCATTCTGAGCAATGGACGCCCCTCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | GGGGGAGGGGCGTCCATTGCTCAGAATGAGCCTGGGCCCGCTCTATCCAACCCTGCCAGCAGCACCAGCTaGACCAGGCCCCAGGAATAC | + |
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Preference number: 4 (lower is better) Translates to: GGGASIAQNEPGPALSNPASSTS*TRPQEY Trigger: GTATTCCTGGGGCCTGGTGCAGCTGGTGCTGCTGGC...AGGGTTGGATAGAGCGGGCCCAGGCTCATTCTGAGCAATGGACGCCCCTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | GGGGGAGGGGCGTCCATTGCTCAGAATGAGCCTGGGCCCGCTCTATCCAACCCTCCCCACACCACCTCTTaGACCTCTGCCCGGATCCTG | + |
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Preference number: 4 (lower is better) Translates to: GGGASIAQNEPGPALSNPPHTTS*TSARIL Trigger: CAGGATCCGGGCAGAGGTGCAAGAGGTGGTGTGGGG...AGGGTTGGATAGAGCGGGCCCAGGCTCATTCTGAGCAATGGACGCCCCTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR TCA 90 bp | GGGGGAGGGGCGTCCATTGCTCAGAATGAGCCTGGGCCCGCTCTATCCAACCCTGTCCTTCAGCTCCCCTaGCATGTTGGCCCCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GGGASIAQNEPGPALSNPVLQLP*HVGPSH Trigger: ATGGCTGGGGCCAACATGTCAGGGGAGCTGAAGGAC...AGGGTTGGATAGAGCGGGCCCAGGCTCATTCTGAGCAATGGACGCCCCTCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | GGGGGAGGGGCGTCCATTGCTCAGAATGAGCCTGGGCCCGCTCTATCCAACCCTCCAGTGAAGTGGCCATaGCGGTGTGGCACGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: GGGASIAQNEPGPALSNPPVKWP*RCGTEE Trigger: TTCCTCCGTGCCACACCGGCATGGCCACTTCACTGG...AGGGTTGGATAGAGCGGGCCCAGGCTCATTCTGAGCAATGGACGCCCCTCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | GGGGGAGGGGCGTCCATTGCTCAGAATGAGCCTGGGCCCGCTCTATCCAACCCTGGAAGGTGGAGAGCTTaGGGGATGATGGCACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GGGASIAQNEPGPALSNPGRWRA*GMMALQ Trigger: CTGGAGTGCCATCATCCCGCAAGCTCTCCACCTTCC...AGGGTTGGATAGAGCGGGCCCAGGCTCATTCTGAGCAATGGACGCCCCTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | GGGGGAGGGGCGTCCATTGCTCAGAATGAGCCTGGGCCCGCTCTATCCAACCCTCCAGGGCATTGGCACTaGAAGCTAGAGCCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGGASIAQNEPGPALSNPPGHWH*KLEPQP Trigger: AGGCTGAGGCTCTAGCTTGCAGTGCCAATGCCCTGG...AGGGTTGGATAGAGCGGGCCCAGGCTCATTCTGAGCAATGGACGCCCCTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGGGCGTCCATTGCTCAGAATGAGCCTGGGCCCGCTCTATCCAACCCTTCATCATGGCCCCTGTaGTGTAGTCCTCGGCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: GGGASIAQNEPGPALSNPSSWPL*CSPRRS Trigger: GCTACGCCGAGGACTACACCACAGGGGCCATGATGA...AGGGTTGGATAGAGCGGGCCCAGGCTCATTCTGAGCAATGGACGCCCCTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR TCA 90 bp | ACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCCGGAAAGCAGGCCCATaGGAAGAAGGGACCCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: TMSVPPPKGDHGPLNTSSRKAGP*EEGTRR Trigger: CCGGCGGGTCCCTTCTTCTCATGGGCCTGCTTTCCG...GGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | GGGGGAGGGGCGTCCATTGCTCAGAATGAGCCTGGGCCCGCTCTATCCAACCCTATGTGTTGGGCTTCATaGCGCCAAGACCAGAGATCC | + |
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Preference number: 4 (lower is better) Translates to: GGGASIAQNEPGPALSNPMCWAS*RQDQRS Trigger: GGATCTCTGGTCTTGGCGGCATGAAGCCCAACACAT...AGGGTTGGATAGAGCGGGCCCAGGCTCATTCTGAGCAATGGACGCCCCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | TGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAAGCGGAGCCGGGCACTGTaGCAGGCAGGCACCATGCTT | + |
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Preference number: 4 (lower is better) Translates to: CPFPRPKETMVPLTHHPKRSRAL*QAGTML Trigger: AAGCATGGTGCCTGCCTGGCACAGTGCCCGGCTCCG...CTTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | TGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAAGCCGAAGCCTTCCCTCTaGTGCCCCAGGAGCCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: CPFPRPKETMVPLTHHPKPKPSL*CPRSLP Trigger: AGGGAGGCTCCTGGGGCAGCAGAGGGAAGGCTTCGG...CTTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGGGCGTCCATTGCTCAGAATGAGCCTGGGCCCGCTCTATCCAACCCTAGATACCACCTTGGCTaGTGCCAAGATGACCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGGASIAQNEPGPALSNPRYHLG*CQDDPE Trigger: TTCGGGGTCATCTTGGCACCAGCCAAGGTGGTATCT...AGGGTTGGATAGAGCGGGCCCAGGCTCATTCTGAGCAATGGACGCCCCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | ACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAGGCAGGGCACCCCGTaGGTTTCCCACCAGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TMSVPPPKGDHGPLNTSSRQGTP*VSHQEQ Trigger: CTGCTCCTGGTGGGAAACCCACGGGGTGCCCTGCCT...GGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | TGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAAGGCGACCCGCCCTCTCTaGTGCCCTCTGCAGGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: CPFPRPKETMVPLTHHPKATRPL*CPLQVQ Trigger: CTGAACCTGCAGAGGGCACCAGAGAGGGCGGGTCGC...CTTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR TCA 90 bp | ACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCTCCGGGAGGCACCGATaGGAGAGCTCATGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TMSVPPPKGDHGPLNTSSSGRHR*ESSWRL Trigger: CAGCCTCCATGAGCTCTCTCATCGGTGCCTCCCGGA...GGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | ACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCGGGCCGTGGCATAGATaGCGATCAACACGAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TMSVPPPKGDHGPLNTSSGPWHR*RSTRAG Trigger: CCCCGCTCGTGTTGATCGGCATCTATGCCACGGCCC...GGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR TCA 90 bp | ATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAACCTCTGCCCGGATCCTaGGTTGACTCAACAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: MSVPPPKGDHGPLNTSSKPLPGS*VDSTGP Trigger: GGGCCCTGTTGAGTCAACTCAGGATCCGGGCAGAGG...TTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | ATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAAGGTGCCCAGAGGAATTaGCCGGCTGGGGTCCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: MSVPPPKGDHGPLNTSSKGAQRN*PAGVLQ Trigger: CTGAAGGACCCCAGCCGGGCAATTCCTCTGGGCACC...TTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | CCTAGAATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCCACCAGGCTCAGCCATaGACCATACTGCGGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: PRISVLCPFPRPKETMVPHQAQP*TILRLH Trigger: GTGCAGCCGCAGTATGGTGCATGGCTGAGCCTGGTG...GGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAATTCTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | TGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAAGTGCAACAGCCCAGCGTaGCCCACCACGAACCCAATC | + |
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Preference number: 4 (lower is better) Translates to: CPFPRPKETMVPLTHHPKCNSPA*PTTNPI Trigger: GATTGGGTTCGTGGTGGGCCACGCTGGGCTGTTGCA...CTTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | CCTAGAATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCCCCTGGGGTAGAACCTaGATCCCACTGGAGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PRISVLCPFPRPKETMVPPWGRT*IPLEPV Trigger: CACAGGCTCCAGTGGGATCCAGGTTCTACCCCAGGG...GGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAATTCTAGG 58% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | GGGGGAGGGGCGTCCATTGCTCAGAATGAGCCTGGGCCCGCTCTATCCAACCCTAAGTACTTCCGAACCTaGTGGAAAAGCAAGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GGGASIAQNEPGPALSNPKYFRT*WKSKAW Trigger: CCAAGCCTTGCTTTTCCACCAGGTTCGGAAGTACTT...AGGGTTGGATAGAGCGGGCCCAGGCTCATTCTGAGCAATGGACGCCCCTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR TCA 90 bp | TGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAAGGGAGAGCTTGCGGGATaGTGGCACTCCAGATACTCC | + |
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Preference number: 4 (lower is better) Translates to: CPFPRPKETMVPLTHHPKGELAG*WHSRYS Trigger: GGAGTATCTGGAGTGCCATCATCCCGCAAGCTCTCC...CTTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR TCA 90 bp | ATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACCACTGCCACAAAACTaGCCAGCACGGAGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ISVLCPFPRPKETMVPLTPLPQN*PARRPG Trigger: CCCTGGCCTCCGTGCTGGTCAGTTTTGTGGCAGTGG...TGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR TCA 90 bp | AGAATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAGCCCGGATCCTGAGTTaGCTCAACAGGGCCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: RISVLCPFPRPKETMVPLARILS*LNRARS Trigger: GCTTCGGGCCCTGTTGAGTCAACTCAGGATCCGGGC...TAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAATTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | ATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAAACCCGCCCTCTCTGGTaGCCTCTGCAGGTTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: MSVPPPKGDHGPLNTSSKTRPLW*PLQVQR Trigger: TCTCTGAACCTGCAGAGGGCACCAGAGAGGGCGGGT...TTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | ACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCATACTCCAGCTCCATTaGGAGGGAAGGCAGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: TMSVPPPKGDHGPLNTSSILQLH*EGRQPP Trigger: AGGGGGCTGCCTTCCCTCCCAATGGAGCTGGAGTAT...GGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | ATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACAGAGGAATTGCCCGGCTaGGGTCCTTCAGCTCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: ISVLCPFPRPKETMVPLTEELPG*GPSAPL Trigger: CAGGGGAGCTGAAGGACCCCAGCCGGGCAATTCCTC...TGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR TCA 90 bp | ATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAAAGAGCTCATGGAGGCTaGGAGGGCCGTGGCATAGAT | + |
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Preference number: 4 (lower is better) Translates to: MSVPPPKGDHGPLNTSSKRAHGG*EGRGID Trigger: ATCTATGCCACGGCCCTCTCAGCCTCCATGAGCTCT...TTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR TCA 90 bp | ATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAACAGCAGCCAATGTGTTaGGCTTCCCAGCCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: MSVPPPKGDHGPLNTSSKQQPMC*ASQPAA Trigger: TGCTGCTGGCTGGGAAGCTCAACACATTGGCTGCTG...TTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR TCA 90 bp | CCTAGAATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCCAAGGTCTCCCAGAGTaGCATGGCCCAGCACATAGA | + |
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Preference number: 4 (lower is better) Translates to: PRISVLCPFPRPKETMVPQGLPE*HGPAHR Trigger: TCTATGTGCTGGGCCATGTCACTCTGGGAGACCTTG...GGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAATTCTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | ACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCACTTTACGTGCTCCTTaGGGACATCCAGGCGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: TMSVPPPKGDHGPLNTSSTLRAP*GHPGGA Trigger: TGCTCCGCCTGGATGTCCGCAAGGAGCACGTAAAGT...GGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | TGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAAGCGCCAGAACTTTACGTaGTCCTTGCGGACATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: CPFPRPKETMVPLTHHPKRQNFT*SLRTSR Trigger: CCTGGATGTCCGCAAGGAGCACGTAAAGTTCTGGCG...CTTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | CCTAGAATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCCATCTTGAGAGCATCTaGCACCGTGGCCACGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: PRISVLCPFPRPKETMVPHLESI*HRGHVV Trigger: GACTACGTGGCCACGGTGGCAGATGCTCTCAAGATG...GGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAATTCTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | ATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACAACCAGGAGCAGCAGCTaGGGCCGCCAGAACTTTACG | + |
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Preference number: 4 (lower is better) Translates to: ISVLCPFPRPKETMVPLTTRSSS*GRQNFT Trigger: CGTAAAGTTCTGGCGGCCCCAGCTGCTGCTCCTGGT...TGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | CCTAGAATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCCCAGCACCAATGTGTTaGGCTTCATGCCGCCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: PRISVLCPFPRPKETMVPPAPMC*ASCRQD Trigger: GTCTTGGCGGCATGAAGCCCAACACATTGGTGCTGG...GGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAATTCTAGG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR TCA 90 bp | ACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCGGGCTCTGTCACAAGTaGAGCTGGAGAGGAAGAACA | + |
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Preference number: 4 (lower is better) Translates to: TMSVPPPKGDHGPLNTSSGLCHK*SWRGRT Trigger: TGTTCTTCCTCTCCAGCTTCACTTGTGACAGAGCCC...GGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR GCA 90 bp | AGAATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTACTCTCTGGTGCCCTCTaGAGGTTCAGAGAAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RISVLCPFPRPKETMVPLLSGAL*RFREGW Trigger: CCAGCCTTCTCTGAACCTGCAGAGGGCACCAGAGAG...TAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAATTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | ATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACCACACCCAGGAAGGTaGAGAGCTTGCGGGATGATG | + |
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Preference number: 4 (lower is better) Translates to: ISVLCPFPRPKETMVPLTPHPGR*RACGMM Trigger: CATCATCCCGCAAGCTCTCCACCTTCCTGGGTGTGG...TGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | ATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACAACATGGACAGAACCGTaGGCACCACCACACCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ISVLCPFPRPKETMVPLTTWTEP*APPHPG Trigger: TCCTGGGTGTGGTGGTGCCCACGGTTCTGTCCATGT...TGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | ACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCCTAACGGGATGTTCCTaGGTCCCACTGCCACAAAAC | + |
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Preference number: 4 (lower is better) Translates to: TMSVPPPKGDHGPLNTSSLTGCS*VPLPQN Trigger: GTTTTGTGGCAGTGGGACCCAGGAACATCCCGTTAG...GGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | ATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAAACAAAGGCCTTCACTTaGGCAAGGTCCACCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MSVPPPKGDHGPLNTSSKTKAFT*ARSTRL Trigger: GAGCCTGGTGGACCTTGCCCAAGTGAAGGCCTTTGT...TTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | ATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAACTCCATTGGTGGCAATaGCACACACTGAGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: MSVPPPKGDHGPLNTSSKLHWWQ*HTLRGL Trigger: CAGTCCTCTCAGTGTGTGCCATTGCCACCAATGGAG...TTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | ATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAATGGCGAAAGTCATCATaGCCCCTGTGGTGTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MSVPPPKGDHGPLNTSSKWRKSS*PLWCSP Trigger: AGGACTACACCACAGGGGCCATGATGACTTTCGCCA...TTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | CCTAGAATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCGGACAGCAAAAACACTaGCGAAAGTCATCATGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRISVLCPFPRPKETMVPGQQKH*RKSSWP Trigger: GGGCCATGATGACTTTCGCCAGTGTTTTTGCTGTCC...GGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAATTCTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR TCA 90 bp | ACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCCTGTTAGTGCCAGAATaGTGTAGGCAACCAGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TMSVPPPKGDHGPLNTSSLLVPE*CRQPVA Trigger: TGCTACTGGTTGCCTACATCATTCTGGCACTAACAG...GGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | ATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACTCTCACAGCTCCATTaGTGGCAATGGCACACACTG | + |
|
Preference number: 4 (lower is better) Translates to: ISVLCPFPRPKETMVPLTLSQLH*WQWHTL Trigger: CAGTGTGTGCCATTGCCACCAATGGAGCTGTGAGAG...TGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | ATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAATACTTCCGAACCTGGTaGAAAAGCAAGGCTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MSVPPPKGDHGPLNTSSKYFRTW*KSKAWL Trigger: CAGCCAAGCCTTGCTTTTCCACCAGGTTCGGAAGTA...TTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR TCA 90 bp | AGAATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTACATTCTTGTTCATCTTaGGAGCATCTGCCACCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RISVLCPFPRPKETMVPLHSCSS*EHLPPW Trigger: CCACGGTGGCAGATGCTCTCAAGATGAACAAGAATG...TAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAATTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CCA 90 bp | ATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACATCACAGCTCCATTGGTaGCAATGGCACACACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISVLCPFPRPKETMVPLTSQLHW*QWHTLR Trigger: TCTCAGTGTGTGCCATTGCCACCAATGGAGCTGTGA...TGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR TCA 90 bp | AGAATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACAGCAGGATGTAGATaGAGAAGGTATAGGCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: RISVLCPFPRPKETMVPLTAGCR*RRYRRL Trigger: CAGTCGCCTATACCTTCTTCATCTACATCCTGCTGT...TAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAATTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CCA 90 bp | GGGGCTCCCAGGAGCCCGAGGTGGAGGGAACAGCGTGCTCAGGGCTaGCGACCCGCCCTCTCTGGTGCCCTCTGCAGGTTCAGAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GAPRSPRWREQRAQG*RPALSGALCRFREG Trigger: GCCTTCTCTGAACCTGCAGAGGGCACCAGAGAGGGCGGGTCGCCAGCCCTGAGCACGCTGTTCCCTCCACCTCGGGCTCCTGGGAGCCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 90 bp | TCCCTTCCTTCGGGTCCCCCAGGGCCTCCTACGGTGCCTCGCCCCTaGTGTGCTCGCACCAGGGCATTGGCACTGCAAGCTAGAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLPSGPPGPPTVPRP*CARTRALALQARAS Trigger: TGAGGCTCTAGCTTGCAGTGCCAATGCCCTGGTGCGAGCACAGCAGGGGCGAGGCACCGTAGGAGGCCCTGGGGGACCCGAAGGAAGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CCA 90 bp | GGCCTCCTACGGTGCCTCGCCCCTGCTGTGCTCGCACCAGGGCATTaGCACTGCAAGCTAGAGCCTCAGCCTCTTCGTCTCCTCGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GLLRCLAPAVLAPGH*HCKLEPQPLRLLDH Trigger: GTGGTCGAGGAGACGAAGAGGCTGAGGCTCTAGCTTGCAGTGCCAATGCCCTGGTGCGAGCACAGCAGGGGCGAGGCACCGTAGGAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS TCA 90 bp | CGCATGCAGGATCCGGGAGGCACCGATGAGAGAGCTCATGGAGGCTaGGAGGGCCGTGGCATAGATGCCGATCAACACGAGCGGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RMQDPGGTDERAHGG*EGRGIDADQHERGP Trigger: TGGCCCCCGCTCGTGTTGATCGGCATCTATGCCACGGCCCTCTCAGCCTCCATGAGCTCTCTCATCGGTGCCTCCCGGATCCTGCATGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CAA 90 bp | GGGGGAGGGGCGTCCATTGCTCAGAATGAGCCTGGGCCCGCTCTATCCAACCCTGCTCGCACCAGGGCATaGGCACTGCAAGCTAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGGASIAQNEPGPALSNPARTRA*ALQARA Trigger: GGCTCTAGCTTGCAGTGCCAATGCCCTGGTGCGAGC...AGGGTTGGATAGAGCGGGCCCAGGCTCATTCTGAGCAATGGACGCCCCTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CCA 90 bp | TGGGACCCAGATCACGGCTCAGGGTCTCCAGCAGTGCCAGGTATCTaGGGTAGCGAGCAGGATCAGCAGGCGGTCGAGGCAGGTACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WDPDHGSGSPAVPGI*GSEQDQQAVEAGTG Trigger: TCCTGTACCTGCCTCGACCGCCTGCTGATCCTGCTCGCTACCCCAGATACCTGGCACTGCTGGAGACCCTGAGCCGTGATCTGGGTCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 90 bp | GCCTCCCTGGGCCCCAAGCACAGGAAGATCCGGAGCCGGGCACTGTaGCAGGCAGGCACCATGCTTAAGATGGTAGCCATCTGCAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: ASLGPKHRKIRSRAL*QAGTMLKMVAICNR Trigger: TCTGTTGCAGATGGCTACCATCTTAAGCATGGTGCCTGCCTGGCACAGTGCCCGGCTCCGGATCTTCCTGTGCTTGGGGCCCAGGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CCA 90 bp | TGGAGAGCTTGCGGGATGATGGCACTCCAGATACTCCAGCTCCATTaGGAGGGAAGGCAGCCCCCTCTTCCCCCAGAAGCCGGTAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WRACGMMALQILQLH*EGRQPPLPPEAGRP Trigger: TGGCCTACCGGCTTCTGGGGGAAGAGGGGGCTGCCTTCCCTCCCAATGGAGCTGGAGTATCTGGAGTGCCATCATCCCGCAAGCTCTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039991.14 ENSMUST00000156646.3 |
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| CDS TCA 90 bp | AAAGGTCATCTTGGGCCAGCGCATGCAGGATCCGGGAGGCACCGATaGGAGAGCTCATGGAGGCTGAGAGGGCCGTGGCATAGATGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KGHLGPAHAGSGRHR*ESSWRLRGPWHRCR Trigger: TCGGCATCTATGCCACGGCCCTCTCAGCCTCCATGAGCTCTCTCATCGGTGCCTCCCGGATCCTGCATGCGCTGGCCCAAGATGACCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS TCA 90 bp | TCCGGAGCAGATGCTGAGCCCCCTGACGCACGGAGGGTGATAGGGTaGGATCCACAAAGGCCTTCACTTGGGCAAGGTCCACCAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGADAEPPDARRVIG*DPQRPSLGQGPPGS Trigger: TGAGCCTGGTGGACCTTGCCCAAGTGAAGGCCTTTGTGGATCTCACCCTATCACCCTCCGTGCGTCAGGGGGCTCAGCATCTGCTCCGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 90 bp | GCTGGTGCCAAGATGACCCCGAAAAGGTCATCTTGGGCCAGCGCATaGAGGATCCGGGAGGCACCGATGAGAGAGCTCATGGAGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: AGAKMTPKRSSWASA*RIREAPMRELMEAE Trigger: CTCAGCCTCCATGAGCTCTCTCATCGGTGCCTCCCGGATCCTGCATGCGCTGGCCCAAGATGACCTTTTCGGGGTCATCTTGGCACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 90 bp | GTGGAGGGAACAGCGTGCTCAGGGCTGGCGACCCGCCCTCTCTGGTaGCCTCTGCAGGTTCAGAGAAGGCTGGGTCTGTTAGAAAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: VEGTACSGLATRPLW*PLQVQRRLGLLENG Trigger: ACCATTTTCTAACAGACCCAGCCTTCTCTGAACCTGCAGAGGGCACCAGAGAGGGCGGGTCGCCAGCCCTGAGCACGCTGTTCCCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CCA 90 bp | GAGGTGGAGGGAACAGCGTGCTCAGGGCTGGCGACCCGCCCTCTCTaGTGCCCTCTGCAGGTTCAGAGAAGGCTGGGTCTGTTAGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: EVEGTACSGLATRPL*CPLQVQRRLGLLEN Trigger: ATTTTCTAACAGACCCAGCCTTCTCTGAACCTGCAGAGGGCACCAGAGAGGGCGGGTCGCCAGCCCTGAGCACGCTGTTCCCTCCACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 90 bp | AAGTTGTCCCTTAGGGTGCTTCCGTTGAACCCAGTGAAGTGGCCATaGCGGTGTGGCACGGAGGAAGCATTGGTGCCCGGTCGAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KLSLRVLPLNPVKWP*RCGTEEALVPGRGA Trigger: AGCTCCTCGACCGGGCACCAATGCTTCCTCCGTGCCACACCGGCATGGCCACTTCACTGGGTTCAACGGAAGCACCCTAAGGGACAACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CCA 90 bp | GATACCACCTTGGCTGGTGCCAAGATGACCCCGAAAAGGTCATCTTaGGCCAGCGCATGCAGGATCCGGGAGGCACCGATGAGAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DTTLAGAKMTPKRSS*ASACRIREAPMREL Trigger: GAGCTCTCTCATCGGTGCCTCCCGGATCCTGCATGCGCTGGCCCAAGATGACCTTTTCGGGGTCATCTTGGCACCAGCCAAGGTGGTATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CAA 90 bp | TGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAAGGATACTCCAGCTCCATaGGGAGGGAAGGCAGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: CPFPRPKETMVPLTHHPKDTPAP*GGKAAP Trigger: GGGGGCTGCCTTCCCTCCCAATGGAGCTGGAGTATC...CTTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CAA 90 bp | ACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCTGGTGCCCAGAGGAATaGCCCGGCTGGGGTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TMSVPPPKGDHGPLNTSSWCPEE*PGWGPS Trigger: TGAAGGACCCCAGCCGGGCAATTCCTCTGGGCACCA...GGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CAA 90 bp | GGGGGAGGGGCGTCCATTGCTCAGAATGAGCCTGGGCCCGCTCTATCCAACCCTGTGGAAAAGCAAGGCTaGGCTGACATAACCCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: GGGASIAQNEPGPALSNPVEKQG*ADITPT Trigger: AGTTGGGGTTATGTCAGCCAAGCCTTGCTTTTCCAC...AGGGTTGGATAGAGCGGGCCCAGGCTCATTCTGAGCAATGGACGCCCCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CAA 90 bp | ACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCACCCCACACCACCTCTaGCACCTCTGCCCGGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: TMSVPPPKGDHGPLNTSSTPHHL*HLCPDP Trigger: AGGATCCGGGCAGAGGTGCAAGAGGTGGTGTGGGGT...GGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS TCA 90 bp | GGGCCGTGGCATAGATGCCGATCAACACGAGCGGGGGCCACAAGCTaGTGTCACGGAAGAAGCCATAGTCTTCTTGAAGCAGGGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GPWHRCRSTRAGATS*CHGRSHSLLEAGLC Trigger: ACAGAGCCCTGCTTCAAGAAGACTATGGCTTCTTCCGTGACATCAGCTTGTGGCCCCCGCTCGTGTTGATCGGCATCTATGCCACGGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 90 bp | GCCTTCACTTGGGCAAGGTCCACCAGGCTCAGCCATGCACCATACTaGGGCTGCACAGGATCTGATGGTAAGGAGTCAAGGTCTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AFTWARSTRLSHAPY*GCTGSDGKESRSPR Trigger: TCTGGGAGACCTTGACTCCTTACCATCAGATCCTGTGCAGCCGCAGTATGGTGCATGGCTGAGCCTGGTGGACCTTGCCCAAGTGAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CAA 90 bp | ATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAAAGCTCCCCTGACATGTaGGCCCCAGCCATGATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: MSVPPPKGDHGPLNTSSKSSPDM*APAMMP Trigger: GGGCATCATGGCTGGGGCCAACATGTCAGGGGAGCT...TTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CAA 90 bp | ACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCTGCCCGGATCCTGAGTaGACTCAACAGGGCCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TMSVPPPKGDHGPLNTSSCPDPE*TQQGPK Trigger: CTTCGGGCCCTGTTGAGTCAACTCAGGATCCGGGCA...GGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 90 bp | ACTTGGGCAAGGTCCACCAGGCTCAGCCATGCACCATACTGCGGCTaGACAGGATCTGATGGTAAGGAGTCAAGGTCTCCCAGAGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: TWARSTRLSHAPYCG*TGSDGKESRSPRVT Trigger: TGTCACTCTGGGAGACCTTGACTCCTTACCATCAGATCCTGTGCAGCCGCAGTATGGTGCATGGCTGAGCCTGGTGGACCTTGCCCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS TCA 90 bp | CATTGGTGGCAATGGCACACACTGAGAGGACTGTTAGTGCCAGAATaGTGTAGGCAACCAGTAGCATCGCCAAGGCCTGCAACAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HWWQWHTLRGLLVPE*CRQPVASPRPATAQ Trigger: CTGGGCTGTTGCAGGCCTTGGCGATGCTACTGGTTGCCTACATCATTCTGGCACTAACAGTCCTCTCAGTGTGTGCCATTGCCACCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CAA 90 bp | ATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAACCTCTCACAGCTCCATaGGTGGCAATGGCACACACT | + |
|
Preference number: 5 (lower is better) Translates to: MSVPPPKGDHGPLNTSSKPLTAP*VAMAHT Trigger: AGTGTGTGCCATTGCCACCAATGGAGCTGTGAGAGG...TTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CAA 90 bp | ACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCATGCCCGTGCAGCCGTaGAAGAGGACAGCAAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: TMSVPPPKGDHGPLNTSSMPVQP*KRTAKT Trigger: TGTTTTTGCTGTCCTCTTCAACGGCTGCACGGGCAT...GGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CAA 90 bp | ATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACCTCCAGATACCACCTaGGCTGGTGCCAAGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: ISVLCPFPRPKETMVPLTPPDTT*AGAKMT Trigger: GGTCATCTTGGCACCAGCCAAGGTGGTATCTGGAGG...TGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CAA 90 bp | AGAATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACAGCAGCCAATGTGTaGAGCTTCCCAGCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RISVLCPFPRPKETMVPLTAANV*SFPASS Trigger: GCTGCTGGCTGGGAAGCTCAACACATTGGCTGCTGT...TAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAATTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CAA 90 bp | AGAATTAGTGTACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTACCCAGCACCAATGTGTaGGGCTTCATGCCGCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RISVLCPFPRPKETMVPLPSTNV*GFMPPR Trigger: TCTTGGCGGCATGAAGCCCAACACATTGGTGCTGGG...TAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGTACACTAATTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CAA 90 bp | TGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCAAAGGAAGCCATAGTCTTCTaGAAGCAGGGCTCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: CPFPRPKETMVPLTHHPKEAIVF*KQGSVT Trigger: TGTGACAGAGCCCTGCTTCAAGAAGACTATGGCTTC...CTTTGGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS-3UTR CAA 90 bp | ACTATGTCCGTTCCCCCGCCCAAAGGAGACCATGGTCCCCTTAACACATCATCCACATTCTTGTTCATCTaGAGAGCATCTGCCACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TMSVPPPKGDHGPLNTSSTFLFI*RASATV Trigger: CACGGTGGCAGATGCTCTCAAGATGAACAAGAATGT...GGATGATGTGTTAAGGGGACCATGGTCTCCTTTGGGCGGGGGAACGGACATAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 72 bp | TCGGGTCCCCCAGGGCCTCCTACGGTGCCTCGCCCCTaGTGTGCTCGCACCAGGGCATTGGCACTGCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGPPGPPTVPRP*CARTRALALQA Trigger: AGCTTGCAGTGCCAATGCCCTGGTGCGAGCACAGCAGGGGCGAGGCACCGTAGGAGGCCCTGGGGGACCCGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CCA 72 bp | AGGAGCCCGAGGTGGAGGGAACAGCGTGCTCAGGGCTaGCGACCCGCCCTCTCTGGTGCCCTCTGCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSPRWREQRAQG*RPALSGALCRF Trigger: GAACCTGCAGAGGGCACCAGAGAGGGCGGGTCGCCAGCCCTGAGCACGCTGTTCCCTCCACCTCGGGCTCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CCA 72 bp | GGAACAGCGTGCTCAGGGCTGGCGACCCGCCCTCTCTaGTGCCCTCTGCAGGTTCAGAGAAGGCTGGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GTACSGLATRPL*CPLQVQRRLGL Trigger: CAGACCCAGCCTTCTCTGAACCTGCAGAGGGCACCAGAGAGGGCGGGTCGCCAGCCCTGAGCACGCTGTTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CCA 72 bp | GCCACACGTCCACATGATGTAGCTGAGCGCTGCTACTaGACCCCCGGCTTAGCCGCTCCGGGGGCAAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ATRPHDVAERCY*TPGLAAPGAKP Trigger: GGGCTTTGCCCCCGGAGCGGCTAAGCCGGGGGTCCAGTAGCAGCGCTCAGCTACATCATGTGGACGTGTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CAA 90 bp | GGGCCTCCTACGGTGCCTCGCCCCTGCTGTGCTCGCACCAGGGCATaGGCACTGCAAGCTAGAGCCTCAGCCTCTTCGTCTCCTCGACCA | + |
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Preference number: 6 (lower is better) Translates to: GPPTVPRPCCARTRA*ALQARASASSSPRP Trigger: TGGTCGAGGAGACGAAGAGGCTGAGGCTCTAGCTTGCAGTGCCAATGCCCTGGTGCGAGCACAGCAGGGGCGAGGCACCGTAGGAGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CAA 90 bp | CCCTTCACCCCACACCACCTCTTGCACCTCTGCCCGGATCCTGAGTaGACTCAACAGGGCCCGAAGCCTTCCCTCTGCTGCCCCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: PFTPHHLLHLCPDPE*TQQGPKPSLCCPRS Trigger: GCTCCTGGGGCAGCAGAGGGAAGGCTTCGGGCCCTGTTGAGTCAACTCAGGATCCGGGCAGAGGTGCAAGAGGTGGTGTGGGGTGAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 72 bp | GAAAGGAGGCTCGGGCATAGAGCCCAGCTCCCAAAGTaGACACACCACCCACGAGGCCCAGCAGAAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: ERRLGHRAQLPK*THHPRGPAEGS Trigger: GCTCCCTTCTGCTGGGCCTCGTGGGTGGTGTGTGCACTTTGGGAGCTGGGCTCTATGCCCGAGCCTCCTTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 72 bp | ACAGCGTGCTCAGGGCTGGCGACCCGCCCTCTCTGGTaGCCTCTGCAGGTTCAGAGAAGGCTGGGTCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: TACSGLATRPLW*PLQVQRRLGLL Trigger: TAACAGACCCAGCCTTCTCTGAACCTGCAGAGGGCACCAGAGAGGGCGGGTCGCCAGCCCTGAGCACGCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 72 bp | TTAAGGGCCACACGTCCACATGATGTAGCTGAGCGCTaGTACTGGACCCCCGGCTTAGCCGCTCCGGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LRATRPHDVAER*YWTPGLAAPGA Trigger: TGCCCCCGGAGCGGCTAAGCCGGGGGTCCAGTAGCAGCGCTCAGCTACATCATGTGGACGTGTGGCCCTTAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 72 bp | CTCGCCCCTGCTGTGCTCGCACCAGGGCATTGGCACTaGAAGCTAGAGCCTCAGCCTCTTCGTCTCCTCGAC | + |
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Preference number: 6 (lower is better) Translates to: LAPAVLAPGHWH*KLEPQPLRLLD Trigger: GTCGAGGAGACGAAGAGGCTGAGGCTCTAGCTTGCAGTGCCAATGCCCTGGTGCGAGCACAGCAGGGGCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CCA 72 bp | GCTTCCGTTGAACCCAGTGAAGTGGCCATGCCGGTGTaGCACGGAGGAAGCATTGGTGCCCGGTCGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: ASVEPSEVAMPV*HGGSIGARSRS Trigger: GCTCCTCGACCGGGCACCAATGCTTCCTCCGTGCCACACCGGCATGGCCACTTCACTGGGTTCAACGGAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS TCA 72 bp | CACACCACCTCTTGCACCTCTGCCCGGATCCTGAGTTaGCTCAACAGGGCCCGAAGCCTTCCCTCTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: HTTSCTSARILS*LNRARSLPSAA Trigger: GGCAGCAGAGGGAAGGCTTCGGGCCCTGTTGAGTCAACTCAGGATCCGGGCAGAGGTGCAAGAGGTGGTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS TCA 72 bp | CACCCCACACCACCTCTTGCACCTCTGCCCGGATCCTaGGTTGACTCAACAGGGCCCGAAGCCTTCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: HPTPPLAPLPGS*VDSTGPEAFPL Trigger: CAGAGGGAAGGCTTCGGGCCCTGTTGAGTCAACTCAGGATCCGGGCAGAGGTGCAAGAGGTGGTGTGGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 72 bp | GGCCCCAAGCACAGGAAGATCCGGAGCCGGGCACTGTaGCAGGCAGGCACCATGCTTAAGATGGTAGCCATC | + |
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Preference number: 6 (lower is better) Translates to: GPKHRKIRSRAL*QAGTMLKMVAI Trigger: GATGGCTACCATCTTAAGCATGGTGCCTGCCTGGCACAGTGCCCGGCTCCGGATCTTCCTGTGCTTGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CAA 72 bp | GTGAAGTGGCCATGCCGGTGTGGCACGGAGGAAGCATaGGTGCCCGGTCGAGGAGCTAACGGGATGTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: VKWPCRCGTEEA*VPGRGANGMFL Trigger: CAGGAACATCCCGTTAGCTCCTCGACCGGGCACCAATGCTTCCTCCGTGCCACACCGGCATGGCCACTTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CAA 72 bp | CCACACCACCTCTTGCACCTCTGCCCGGATCCTGAGTaGACTCAACAGGGCCCGAAGCCTTCCCTCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PHHLLHLCPDPE*TQQGPKPSLCC Trigger: GCAGCAGAGGGAAGGCTTCGGGCCCTGTTGAGTCAACTCAGGATCCGGGCAGAGGTGCAAGAGGTGGTGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CAA 90 bp | TTGAACCCAGTGAAGTGGCCATGCCGGTGTGGCACGGAGGAAGCATaGGTGCCCGGTCGAGGAGCTAACGGGATGTTCCTGGGTCCCACT | + |
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Preference number: 6 (lower is better) Translates to: LNPVKWPCRCGTEEA*VPGRGANGMFLGPT Trigger: AGTGGGACCCAGGAACATCCCGTTAGCTCCTCGACCGGGCACCAATGCTTCCTCCGTGCCACACCGGCATGGCCACTTCACTGGGTTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS TCA 72 bp | GATCCGGGAGGCACCGATGAGAGAGCTCATGGAGGCTaGGAGGGCCGTGGCATAGATGCCGATCAACACGAG | + |
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Preference number: 6 (lower is better) Translates to: DPGGTDERAHGG*EGRGIDADQHE Trigger: CTCGTGTTGATCGGCATCTATGCCACGGCCCTCTCAGCCTCCATGAGCTCTCTCATCGGTGCCTCCCGGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 72 bp | CTTAGGGTGCTTCCGTTGAACCCAGTGAAGTGGCCATaGCGGTGTGGCACGGAGGAAGCATTGGTGCCCGGT | + |
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Preference number: 6 (lower is better) Translates to: LRVLPLNPVKWP*RCGTEEALVPG Trigger: ACCGGGCACCAATGCTTCCTCCGTGCCACACCGGCATGGCCACTTCACTGGGTTCAACGGAAGCACCCTAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 72 bp | GCAGCAGCTGGGGCCGCCAGAACTTTACGTGCTCCTTaGGGACATCCAGGCGGAGCAAGTACTTCCGAACCT | + |
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Preference number: 6 (lower is better) Translates to: AAAGAARTLRAP*GHPGGASTSEP Trigger: AGGTTCGGAAGTACTTGCTCCGCCTGGATGTCCGCAAGGAGCACGTAAAGTTCTGGCGGCCCCAGCTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CCA 72 bp | TTGGCTGGTGCCAAGATGACCCCGAAAAGGTCATCTTaGGCCAGCGCATGCAGGATCCGGGAGGCACCGATG | + |
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Preference number: 6 (lower is better) Translates to: LAGAKMTPKRSS*ASACRIREAPM Trigger: CATCGGTGCCTCCCGGATCCTGCATGCGCTGGCCCAAGATGACCTTTTCGGGGTCATCTTGGCACCAGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CAA 72 bp | CTTGGCTGGTGCCAAGATGACCCCGAAAAGGTCATCTaGGGCCAGCGCATGCAGGATCCGGGAGGCACCGAT | + |
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Preference number: 6 (lower is better) Translates to: LGWCQDDPEKVI*GQRMQDPGGTD Trigger: ATCGGTGCCTCCCGGATCCTGCATGCGCTGGCCCAAGATGACCTTTTCGGGGTCATCTTGGCACCAGCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CAA 72 bp | AGCAGCAGCTGGGGCCGCCAGAACTTTACGTGCTCCTaGCGGACATCCAGGCGGAGCAAGTACTTCCGAACC | + |
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Preference number: 6 (lower is better) Translates to: SSSWGRQNFTCS*RTSRRSKYFRT Trigger: GGTTCGGAAGTACTTGCTCCGCCTGGATGTCCGCAAGGAGCACGTAAAGTTCTGGCGGCCCCAGCTGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS TCA 72 bp | CACCACCACACCCAGGAAGGTGGAGAGCTTGCGGGATaGTGGCACTCCAGATACTCCAGCTCCATTGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: HHHTQEGGELAG*WHSRYSSSIGR Trigger: CCTCCCAATGGAGCTGGAGTATCTGGAGTGCCATCATCCCGCAAGCTCTCCACCTTCCTGGGTGTGGTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039991.14 ENSMUST00000156646.3 |
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| CDS TCA 72 bp | GATGCTGAGCCCCCTGACGCACGGAGGGTGATAGGGTaGGATCCACAAAGGCCTTCACTTGGGCAAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: DAEPPDARRVIG*DPQRPSLGQGP Trigger: TGGACCTTGCCCAAGTGAAGGCCTTTGTGGATCTCACCCTATCACCCTCCGTGCGTCAGGGGGCTCAGCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CCA 72 bp | TGGACAGAACCGTGGGCACCACCACACCCAGGAAGGTaGAGAGCTTGCGGGATGATGGCACTCCAGATACTC | + |
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Preference number: 6 (lower is better) Translates to: WTEPWAPPHPGR*RACGMMALQIL Trigger: GAGTATCTGGAGTGCCATCATCCCGCAAGCTCTCCACCTTCCTGGGTGTGGTGGTGCCCACGGTTCTGTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039991.14 ENSMUST00000156646.3 |
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| CDS CCA 72 bp | ACCAGTAGCATCGCCAAGGCCTGCAACAGCCCAGCGTaGCCCACCACGAACCCAATCCTCAGAAACACGACT | + |
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Preference number: 6 (lower is better) Translates to: TSSIAKACNSPA*PTTNPILRNTT Trigger: AGTCGTGTTTCTGAGGATTGGGTTCGTGGTGGGCCACGCTGGGCTGTTGCAGGCCTTGGCGATGCTACTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CAA 90 bp | AGATACCACCTTGGCTGGTGCCAAGATGACCCCGAAAAGGTCATCTaGGGCCAGCGCATGCAGGATCCGGGAGGCACCGATGAGAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: RYHLGWCQDDPEKVI*GQRMQDPGGTDERA Trigger: AGCTCTCTCATCGGTGCCTCCCGGATCCTGCATGCGCTGGCCCAAGATGACCTTTTCGGGGTCATCTTGGCACCAGCCAAGGTGGTATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CAA 90 bp | ATCCAGGCGGAGCAAGTACTTCCGAACCTGGTGGAAAAGCAAGGCTaGGCTGACATAACCCCAACTGCTGGGTCCTCCTCGTGCGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: IQAEQVLPNLVEKQG*ADITPTAGSSSCGE Trigger: CTCACCGCACGAGGAGGACCCAGCAGTTGGGGTTATGTCAGCCAAGCCTTGCTTTTCCACCAGGTTCGGAAGTACTTGCTCCGCCTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 72 bp | AAGATGACCCCGAAAAGGTCATCTTGGGCCAGCGCATaGAGGATCCGGGAGGCACCGATGAGAGAGCTCATG | + |
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Preference number: 6 (lower is better) Translates to: KMTPKRSSWASA*RIREAPMRELM Trigger: CATGAGCTCTCTCATCGGTGCCTCCCGGATCCTGCATGCGCTGGCCCAAGATGACCTTTTCGGGGTCATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 72 bp | AGGTCCACCAGGCTCAGCCATGCACCATACTGCGGCTaGACAGGATCTGATGGTAAGGAGTCAAGGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RSTRLSHAPYCG*TGSDGKESRSP Trigger: GGGAGACCTTGACTCCTTACCATCAGATCCTGTGCAGCCGCAGTATGGTGCATGGCTGAGCCTGGTGGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS GCA 72 bp | TGGGCAAGGTCCACCAGGCTCAGCCATGCACCATACTaGGGCTGCACAGGATCTGATGGTAAGGAGTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: WARSTRLSHAPY*GCTGSDGKESR Trigger: CCTTGACTCCTTACCATCAGATCCTGTGCAGCCGCAGTATGGTGCATGGCTGAGCCTGGTGGACCTTGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CCA 72 bp | TTGTCCCTTAGGGTGCTTCCGTTGAACCCAGTGAAGTaGCCATGCCGGTGTGGCACGGAGGAAGCATTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LSLRVLPLNPVK*PCRCGTEEALV Trigger: CACCAATGCTTCCTCCGTGCCACACCGGCATGGCCACTTCACTGGGTTCAACGGAAGCACCCTAAGGGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CCA 72 bp | GTGGGGCATCGTCGTAAAAACCCAGCACCAATGTGTTaGGCTTCATGCCGCCAAGACCAGAGATCCGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: VGHRRKNPAPMC*ASCRQDQRSGA Trigger: TGCTCCGGATCTCTGGTCTTGGCGGCATGAAGCCCAACACATTGGTGCTGGGTTTTTACGACGATGCCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CAA 72 bp | GGCAAAGCCCCACATGCTCGTGCGAGAACCACATTCTaGTTCATCTTGAGAGCATCTGCCACCGTGGCCACG | + |
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Preference number: 6 (lower is better) Translates to: GKAPHARARTTF*FILRASATVAT Trigger: CGTGGCCACGGTGGCAGATGCTCTCAAGATGAACAAGAATGTGGTTCTCGCACGAGCATGTGGGGCTTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS TCA 72 bp | CACATGCTCGTGCGAGAACCACATTCTTGTTCATCTTaGGAGCATCTGCCACCGTGGCCACGTAGTCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: HMLVREPHSCSS*EHLPPWPRSLG Trigger: CCCAAGACTACGTGGCCACGGTGGCAGATGCTCTCAAGATGAACAAGAATGTGGTTCTCGCACGAGCATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS CCA 72 bp | CAGCAAAAACACTGGCGAAAGTCATCATGGCCCCTGTaGTGTAGTCCTCGGCGTAGCCAGCACCTAAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: QQKHWRKSSWPL*CSPRRSQHLSC Trigger: ACAACTTAGGTGCTGGCTACGCCGAGGACTACACCACAGGGGCCATGATGACTTTCGCCAGTGTTTTTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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| CDS TCA 72 bp | CAATGGCACACACTGAGAGGACTGTTAGTGCCAGAATaGTGTAGGCAACCAGTAGCATCGCCAAGGCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: QWHTLRGLLVPE*CRQPVASPRPA Trigger: TGCAGGCCTTGGCGATGCTACTGGTTGCCTACATCATTCTGGCACTAACAGTCCTCTCAGTGTGTGCCATTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039991.14 |
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