Pregenerated sensors for SLC12A8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035506Ensembl transcript IDs: ENSMUST00000059056.15, ENSMUST00000117134.2, ENSMUST00000119173.8, ENSMUST00000121925.8, ENSMUST00000122314.8, ENSMUST00000122427.8
Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCAGGAAGGAGGAGTGGTGGTAACGATCTCGGGTGGCGAAGTCTaGATTGTCCTGGGTAAGCTGAGTCATTGCCATGTCAACCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: AQEGGVVVTISGGEV*IVLGKLSHCHVNLG Trigger: GCCAAGGTTGACATGGCAATGACTCAGCTTACCCAGGACAATGCAGACTTCGCCACCCGAGATCGTTACCACCACTCCTCCTTCCTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117134.2 |
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| 3UTR TCA 90 bp | GTCATACCTAGTATCTGGCTAGACATGCCATTTCAGACCGGAATGTaGTTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGT | + |
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Preference number: 1 (lower is better) Translates to: VIPSIWLDMPFQTGM*FPASKAVVGRPVLG Trigger: ACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCTGAAATGGCATGTCTAGCCAGATACTAGGTATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| 3UTR CCA 90 bp | GAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTaGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: ECDFQRPRLWWEDQS*VFLLVEATSKGSEA Trigger: AGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| 3UTR CCA 90 bp | CTTAGAATAAGAAATCTCGTTTTGATTCTCCACATTTGGTTGTCTTaGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGG | + |
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Preference number: 1 (lower is better) Translates to: LRIRNLVLILHIWLS*CHLIILVPVDSSGW Trigger: CCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGACAACCAAATGTGGAGAATCAAAACGAGATTTCTTATTCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| 3UTR TCA 90 bp | GGTGGCTCACAACCATCTGTAATGGGATCCGATGCCCTCTTCTGGTaGTGCTATTTTCTGTCTGAAAATAGCTACAGTATATGTATATAT | + |
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Preference number: 1 (lower is better) Translates to: GGSQPSVMGSDALFW*CYFLSENSYSICIY Trigger: ATATATACATATACTGTAGCTATTTTCAGACAGAAAATAGCATCACCAGAAGAGGGCATCGGATCCCATTACAGATGGTTGTGAGCCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGTCCTAGTAGGGAGGCATCAACTGCTCCCGGCTCAGGAAGGAGGAGTGGTGGTGATGGCGCCAAGATaGTTTGCTCCTGGGCGGACC | + |
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Preference number: 2 (lower is better) Translates to: EVLVGRHQLLPAQEGGVVVMAPR*FAPGRT Trigger: GGTCCGCCCAGGAGCAAATCATCTTGGCGCCATCAC...CACCACTCCTCCTTCCTGAGCCGGGAGCAGTTGATGCCTCCCTACTAGGACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117134.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAAGGTGGGGTCCAGCAAAGGTTCTGAGGCTTaGGTCCCCCATCTCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: LRLGSPISTAASRKVGSSKGSEA*VPHLHS Trigger: GCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTT...GCTGGACCCCACCTTTCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| 3UTR-3UTR GCA 90 bp | GTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTCGGGTGGCGAAGTCTaGATTGTCCTGGGTAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: VEATSKGSEAWVPHLHSGSGGEV*IVLGKL Trigger: CAGCTTACCCAGGACAATGCAGACTTCGCCACCCGA...GCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117134.2 ENSMUST00000122427.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACGTGCGTCCAAGGCTGTGGTaGGAAGACCAGTCTTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: WCHLIILVPVDSSGWAHVRPRLW*EDQSWV Trigger: AACCCAAGACTGGTCTTCCCACCACAGCCTTGGACG...CACGTGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| 3UTR-3UTR CCA 90 bp | AGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGCGTCCAAGGCTGTGGTaGGAAGACCAGTCTTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: RPECDFQRPRLWWEDQSWRPRLW*EDQSWV Trigger: AACCCAAGACTGGTCTTCCCACCACAGCCTTGGACG...CCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| 3UTR-3UTR TCA 90 bp | CCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTAACTTCCAAAGGTTCTaGGGCTTGGGTCCCCCATCT | + |
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Preference number: 2 (lower is better) Translates to: PECDFQRPRLWWEDQSWVNFQRF*GLGPPS Trigger: AGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTT...AACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTTGTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGAAAGGTTCTGAGGCTTaGGTCCCCCATCTCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: WLSWCHLIILVPVDSSGWKGSEA*VPHLHS Trigger: GCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTT...CCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGACAACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| 3UTR-3UTR CCA 90 bp | AGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGTTGCCATGTCAACCTTaGCTGGTGATGGCGCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: RPECDFQRPRLWWEDQSWLPCQP*LVMAPR Trigger: TCTTGGCGCCATCACCAGCCAAGGTTGACATGGCAA...CCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117134.2 |
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| 3UTR-3UTR GCA 90 bp | GAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTCGGGTGGCGAAGTCTaGATTGTCCTGGGTAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: ECDFQRPRLWWEDQSWVFSGGEV*IVLGKL Trigger: CAGCTTACCCAGGACAATGCAGACTTCGCCACCCGA...GAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117134.2 ENSMUST00000122427.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGTTGTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGAAAGGTTCTGAGGCTTaGGTCCCCCATCTCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: LVVLVSPDHPGACGLFRLKGSEA*VPHLHS Trigger: GCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTT...CAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGACAACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| 3UTR CAA 90 bp | CAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATaGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: QRPRLWWEDQSWVFL*VEATSKGSEAWVPH Trigger: ATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| 3UTR-3UTR TCA 90 bp | GAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCAACTTCCAAAGGTTCTaGGGCTTGGGTCCCCCATCT | + |
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Preference number: 2 (lower is better) Translates to: ECDFQRPRLWWEDQSWVFNFQRF*GLGPPS Trigger: AGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTT...GAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGTTGTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGAACTTCCAAAGGTTCTaGGGCTTGGGTCCCCCATCT | + |
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Preference number: 2 (lower is better) Translates to: LVVLVSPDHPGACGLFRLNFQRF*GLGPPS Trigger: AGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTT...CAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGACAACCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| 3UTR-3UTR CCA 90 bp | AATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTAAAGGTTCTGAGGCTTaGGTCCCCCATCTCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: NVISSVQGCGGKTSLGFSKGSEA*VPHLHS Trigger: GCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTT...AGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAAACAGGGAGAAGGGGGTTTCTATACTCTGTGGCTTGGGAACCATGTGAGTTCATCCTGGTGCCTGTaGACTCTTCAGGTTGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: EKQGEGGFYTLWLGNHVSSSWCL*TLQVGH Trigger: GTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGA...ACTCACATGGTTCCCAAGCCACAGAGTATAGAAACCCCCTTCTCCCTGTTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGTTGTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGTAAGCTGAGTCATTaGCATGTCAACCTTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LVVLVSPDHPGACGLFRLGKLSH*HVNLGW Trigger: CCAGCCAAGGTTGACATGGCAATGACTCAGCTTACC...CAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGACAACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117134.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTTTGTCCTGGGTAAGCTaGGTCATTGCCATGTCAACC | + |
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Preference number: 2 (lower is better) Translates to: FPASKAVVGRPVLGFLIGLSWVS*VIAMST Trigger: GGTTGACATGGCAATGACTCAGCTTACCCAGGACAA...ACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117134.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGAAAGGTTCTGAGGCTTaGGTCCCCCATCTCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: VVGRPVLGFLIGRSNFQRKGSEA*VPHLHS Trigger: GCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTT...CCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGAACTTCCAAAGGTTCTaGGGCTTGGGTCCCCCATCT | + |
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Preference number: 2 (lower is better) Translates to: VVGRPVLGFLIGRSNFQRNFQRF*GLGPPS Trigger: AGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTT...CCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCCGTCCAAGGCTGTGGTaGGAAGACCAGTCTTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: VGRPVLGFLIGRSNFQRFRPRLW*EDQSWV Trigger: AACCCAAGACTGGTCTTCCCACCACAGCCTTGGACG...GAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCGGTAACGATCTCGGGTaGCGAAGTCTGCATTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: SWVFLLVEATSKGSEAWVGNDLG*RSLHCP Trigger: AGGACAATGCAGACTTCGCCACCCGAGATCGTTACC...GACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117134.2 ENSMUST00000122427.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAACAGTAACAGCTTACAAATGTACATCCCCAGTCACCCTGTAATTCTCCTTAACTTCCAAAGGTTCTaGGGCTTGGGTCCCCCATCT | + |
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Preference number: 2 (lower is better) Translates to: PNSNSLQMYIPSHPVILLNFQRF*GLGPPS Trigger: AGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTT...AAGGAGAATTACAGGGTGACTGGGGATGTACATTTGTAAGCTGTTACTGTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
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| 3UTR CAA 90 bp | TGGCCCCTTAGAATAAGAAATCTCGTTTTGATTCTCCACATTTGGTaGTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: WPLRIRNLVLILHIW*SWCHLIILVPVDSS Trigger: TGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGACAACCAAATGTGGAGAATCAAAACGAGATTTCTTATTCTAAGGGGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCCAAACAGTAACAGCTTACAAATGTACATCCCCAGTCACCCTGTAATTCTCTTCTTCCAGAGATCCTaGGTTCAATTCCCAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: SPNSNSLQMYIPSHPVILFFQRS*VQFPAT Trigger: GGTTGCTGGGAATTGAACTCAGGATCTCTGGAAGAA...GAGAATTACAGGGTGACTGGGGATGTACATTTGTAAGCTGTTACTGTTTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAACAGTAACAGCTTACAAATGTACATCCCCAGTCACCCTGTAATTCTCCTTTTGATTCTCCACATTTaGTTGTCTTGGTGTCACCTG | + |
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Preference number: 2 (lower is better) Translates to: PNSNSLQMYIPSHPVILLLILHI*LSWCHL Trigger: CAGGTGACACCAAGACAACCAAATGTGGAGAATCAA...AAGGAGAATTACAGGGTGACTGGGGATGTACATTTGTAAGCTGTTACTGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
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| 3UTR TCA 72 bp | TCTCGGGTGGCGAAGTCTGCATTGTCCTGGGTAAGCTaGGTCATTGCCATGTCAACCTTGGCTGGTGATGGC | + |
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Preference number: 3 (lower is better) Translates to: SRVAKSALSWVS*VIAMSTLAGDG Trigger: GCCATCACCAGCCAAGGTTGACATGGCAATGACTCAGCTTACCCAGGACAATGCAGACTTCGCCACCCGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117134.2 |
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| 3UTR GCA 72 bp | GGAGGAGTGGTGGTAACGATCTCGGGTGGCGAAGTCTaGATTGTCCTGGGTAAGCTGAGTCATTGCCATGTC | + |
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Preference number: 3 (lower is better) Translates to: GGVVVTISGGEV*IVLGKLSHCHV Trigger: GACATGGCAATGACTCAGCTTACCCAGGACAATGCAGACTTCGCCACCCGAGATCGTTACCACCACTCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117134.2 |
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| 3UTR CCA 72 bp | CACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTaGGCACACGTGGAAGCCATAGTCATACCTAGTATC | + |
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Preference number: 3 (lower is better) Translates to: HLIILVPVDSSG*AHVEAIVIPSI Trigger: GATACTAGGTATGACTATGGCTTCCACGTGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| 3UTR GCA 72 bp | GGAGAAGAGCGGGATGTAGTGCATTGTAAACAGAGCTaGATTTGCAGATGGGAGGGGTCTGTAAAGAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: GEERDVVHCKQS*ICRWEGSVKRW Trigger: CCACCTCTTTACAGACCCCTCCCATCTGCAAATGCAGCTCTGTTTACAATGCACTACATCCCGCTCTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
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| 3UTR-3UTR CAA 90 bp | TGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACGTGGAATTTGATTCTCCACATTaGGTTGTCTTGGTGTCACCT | + |
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Preference number: 3 (lower is better) Translates to: CHLIILVPVDSSGWAHVEFDSPH*VVLVSP Trigger: AGGTGACACCAAGACAACCAAATGTGGAGAATCAAA...TTCCACGTGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| 3UTR TCA 72 bp | GGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTaGGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: GFLIGRSNFQRF*GLGPPSPQRLL Trigger: TAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| 3UTR CCA 72 bp | TTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTaGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: FQRPRLWWEDQS*VFLLVEATSKG Trigger: ACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| 3UTR CCA 72 bp | AGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTaGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAA | + |
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Preference number: 3 (lower is better) Translates to: RPECDFQRPRLW*EDQSWVFLLVE Trigger: TTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| 3UTR-3UTR CAA 90 bp | CAACCACATGGTGGCTCACAACCATCTGTAATGGGATCCGATGCCCTCTTCTGGTCTTGGGTTTTCTTATaGGTAGAAGCAACTTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: QPHGGSQPSVMGSDALFWSWVFL*VEATSK Trigger: TTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGA...CCAGAAGAGGGCATCGGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
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| 3UTR CCA 72 bp | GATGTAGTGCATTGTAAACAGAGCTGCATTTGCAGATaGGAGGGGTCTGTAAAGAGGTGGCTGATGTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: DVVHCKQSCICR*EGSVKRWLMFA Trigger: TGCAAACATCAGCCACCTCTTTACAGACCCCTCCCATCTGCAAATGCAGCTCTGTTTACAATGCACTACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
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| 3UTR CCA 72 bp | AGAAATCTCGTTTTGATTCTCCACATTTGGTTGTCTTaGTGTCACCTGATCATCCTGGTGCCTGTGGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: RNLVLILHIWLS*CHLIILVPVDS Trigger: AGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGACAACCAAATGTGGAGAATCAAAACGAGATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTCTTGGGTTTTCTTATaGGTAGAAGCAACTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: ISSVQGCGGKTSLGFSYWSWVFL*VEATSK Trigger: TTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGA...CCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| 3UTR CCA 72 bp | GATGAGAAACAGGGAGAAGGGGGTTTCTATACTCTGTaGCTTGGGAACCATGTGAGTGTAGTTAGTATACAT | + |
|
Preference number: 3 (lower is better) Translates to: DEKQGEGGFYTL*LGNHVSVVSIH Trigger: ATGTATACTAACTACACTCACATGGTTCCCAAGCCACAGAGTATAGAAACCCCCTTCTCCCTGTTTCTCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
||
| 3UTR CCA 72 bp | GGAAACTGTGTAAGCATCTTCATGGAAATGCTTCTATaGCAGATTAAGGGAGAAGAGCGGGATGTAGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GNCVSIFMEMLL*QIKGEERDVVH Trigger: ATGCACTACATCCCGCTCTTCTCCCTTAATCTGCCATAGAAGCATTTCCATGAAGATGCTTACACAGTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCTCTTGGGTTTTCTTATaGGTAGAAGCAACTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: WVFLLVEATSKGSEAWVPSWVFL*VEATSK Trigger: TTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGA...GGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| 3UTR TCA 72 bp | TTCAGGTATCCTTCACGACTGTGCACACAAACACAGTaGCTCTTTGCAGAAGCGGCTGTAATAGCAAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: FRYPSRLCTQTQ*LFAEAAVIAKY Trigger: ATATTTTGCTATTACAGCCGCTTCTGCAAAGAGTCACTGTGTTTGTGTGCACAGTCGTGAAGGATACCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
||
| 3UTR TCA 72 bp | CAACCATCTGTAATGGGATCCGATGCCCTCTTCTGGTaGTGCTATTTTCTGTCTGAAAATAGCTACAGTATA | + |
|
Preference number: 3 (lower is better) Translates to: QPSVMGSDALFW*CYFLSENSYSI Trigger: TATACTGTAGCTATTTTCAGACAGAAAATAGCATCACCAGAAGAGGGCATCGGATCCCATTACAGATGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
||
| 3UTR CCA 72 bp | CTTAGAATAAGAAATCTCGTTTTGATTCTCCACATTTaGTTGTCTTGGTGTCACCTGATCATCCTGGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRIRNLVLILHI*LSWCHLIILVP Trigger: AGGCACCAGGATGATCAGGTGACACCAAGACAACCAAATGTGGAGAATCAAAACGAGATTTCTTATTCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAAACAGTAACAGCTTACAAATGTACATCCCCAGTCACCCTGTAATTCTCCTTTCTTGGGTTTTCTTATaGGTAGAAGCAACTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PNSNSLQMYIPSHPVILLSWVFL*VEATSK Trigger: TTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGA...AAGGAGAATTACAGGGTGACTGGGGATGTACATTTGTAAGCTGTTACTGTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAAGGTGGGGTCCAGCCGGACCTCAGGCTCCTaGAGGAGGGGACCAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRLGSPISTAASRKVGSSRTSGS*RRGPRR Trigger: CCTTCTTGGTCCCCTCCTGCAGGAGCCTGAGGTCCG...GCTGGACCCCACCTTTCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAAGGTGGGGTCCAGCAGGCGAGTGCAGGGATaGCTTTGTCCTGGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLGSPISTAASRKVGSSRRVQG*LCPGRC Trigger: GCATCGCCCAGGACAAAGTCATCCCTGCACTCGCCT...GCTGGACCCCACCTTTCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTCCTAGTAGGGAGGCATCAACTGCTCCCGGCTCAGGAAGGAGGAGTGGTGAGGCGAGTGCAGGGATaGCTTTGTCCTGGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: EVLVGRHQLLPAQEGGVVRRVQG*LCPGRC Trigger: GCATCGCCCAGGACAAAGTCATCCCTGCACTCGCCT...CACCACTCCTCCTTCCTGAGCCGGGAGCAGTTGATGCCTCCCTACTAGGACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117134.2 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | GTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCCGGACCTCAGGCTCCTaGAGGAGGGGACCAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VEATSKGSEAWVPHLHSGRTSGS*RRGPRR Trigger: CCTTCTTGGTCCCCTCCTGCAGGAGCCTGAGGTCCG...GCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACGTGGACGGACCTCAGGCTCCTaGAGGAGGGGACCAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSPDHPGACGLFRLGTRGRTSGS*RRGPRR Trigger: CCTTCTTGGTCCCCTCCTGCAGGAGCCTGAGGTCCG...TCCACGTGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAAGGTGGGGTCCAGCTGTTCTGGGTCCAGGTaGGTGAAAGAGCCCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: LRLGSPISTAASRKVGSSCSGSR*VKEPTT Trigger: TGTGGTGGGCTCTTTCACCCACCTGGACCCAGAACA...GCTGGACCCCACCTTTCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACGTGGACATCAGAGCCGTAGCTaGGAGCCCTGTCCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSPDHPGACGLFRLGTRGHQSRS*EPCPGA Trigger: TGCTCCAGGACAGGGCTCCCAGCTACGGCTCTGATG...TCCACGTGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGGAGGAGTGGTGGTAACGATCTCGGGTGGCGAAGTCTGCATTGTCCTGCTCCTCCCCAGCCTCTaGGACACTCATCCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QEGGVVVTISGGEVCIVLLLPSL*DTHPSL Trigger: CAAGGAGGGATGAGTGTCCCAGAGGCTGGGGAGGAG...CAGGACAATGCAGACTTCGCCACCCGAGATCGTTACCACCACTCCTCCTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117134.2 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAAGGTGGATCCATGTCCTTGGTaGACTCCAGCAGGGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PKVLRLGSPISTAASRKVDPCPW*TPAGCP Trigger: AGGGCACCCTGCTGGAGTTCACCAAGGACATGGATC...CACCTTTCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAAGGTGGGGTCCAGCTTGTCCTGGGTAAGCTaGGTCATTGCCATGTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: LRLGSPISTAASRKVGSSLSWVS*VIAMST Trigger: GGTTGACATGGCAATGACTCAGCTTACCCAGGACAA...GCTGGACCCCACCTTTCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAAGGTGGGGTCCAGCGGTCAGGCAGATGGCTaGTACCGGTGTTTTATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRLGSPISTAASRKVGSSGQADG*YRCFIW Trigger: CCAAATAAAACACCGGTAGCAGCCATCTGCCTGACC...GCTGGACCCCACCTTTCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAAGGTGGGGTCCAGCAGCTGGTCAGGCAGATaGCTGCTACCGGTGTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LRLGSPISTAASRKVGSSSWSGR*LLPVFY Trigger: ATAAAACACCGGTAGCAGCCATCTGCCTGACCAGCT...GCTGGACCCCACCTTTCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | GTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCCCAGGACAAAGGCCATaGTCACCAAGCTGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VEATSKGSEAWVPHLHSGPGQRP*SPSWSG Trigger: GCCTGACCAGCTTGGTGACCATGGCCTTTGTCCTGG...GCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTGCAGTGCAGAGTATCTaGGCCTTGTCTGGGGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQLPKVLRLGSPISTAASAVQSI*ALSGDG Trigger: CCCGTCCCCAGACAAGGCCCAGATACTCTGCACTGC...AGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | CAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGACATCAGAGCCGTAGCTaGGAGCCCTGTCCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLPKVLRLGSPISTAASRHQSRS*EPCPGA Trigger: TGCTCCAGGACAGGGCTCCCAGCTACGGCTCTGATG...TCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTAGGCGAGTGCAGGGATaGCTTTGTCCTGGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FRPECDFQRPRLWWEDQSRRVQG*LCPGRC Trigger: GCATCGCCCAGGACAAAGTCATCCCTGCACTCGCCT...AGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTGTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGTGATGGCGCCAAGATaGTTTGCTCCTGGGCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: WLSWCHLIILVPVDSSGWVMAPR*FAPGRT Trigger: GGTCCGCCCAGGAGCAAATCATCTTGGCGCCATCAC...CCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGACAACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTGTGATGGCGCCAAGATaGTTTGCTCCTGGGCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: FRPECDFQRPRLWWEDQSVMAPR*FAPGRT Trigger: GGTCCGCCCAGGAGCAAATCATCTTGGCGCCATCAC...AGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTGGCGCCAAGATGATTTaGTCCTGGGCGGACCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRPECDFQRPRLWWEDQSGAKMI*SWADLR Trigger: CCTGAGGTCCGCCCAGGAGCAAATCATCTTGGCGCC...AGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTGTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGCAGTGGGCACAGACCTaGAGGAGGGGACCAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WLSWCHLIILVPVDSSGWQWAQT*RRGPRR Trigger: CCTTCTTGGTCCCCTCCTGCAGGTCTGTGCCCACTG...CCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGACAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117134.2 |
||
| CDS-3UTR CCA 90 bp | CAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGATGCTGGGCTGCCTCGTaGAAGAGTTCTTGCGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QLPKVLRLGSPISTAASRCWAAS*KSSCGD Trigger: GTCTCCGCAAGAACTCTTCCACGAGGCAGCCCAGCA...TCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059056.15 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | TGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACGTGGAAGCACCGAGGAGATCATaGAGTAGACACCGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CHLIILVPVDSSGWAHVEAPRRS*SRHRHC Trigger: GCAGTGGCGGTGTCTACTCCATGATCTCCTCGGTGC...TTCCACGTGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 |
||
| CDS-3UTR CCA 90 bp | CCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTCCAGGACAAAGGCCATaGTCACCAAGCTGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PECDFQRPRLWWEDQSWVPGQRP*SPSWSG Trigger: GCCTGACCAGCTTGGTGACCATGGCCTTTGTCCTGG...AACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | GTAACGATCTCGGGTGGCGAAGTCTGCATTGTCCTGGGTAAGCTGAGTCATTGCCATCAGAGCCGTAGCTaGGAGCCCTGTCCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTISGGEVCIVLGKLSHCHQSRS*EPCPGA Trigger: TGCTCCAGGACAGGGCTCCCAGCTACGGCTCTGATG...GCAATGACTCAGCTTACCCAGGACAATGCAGACTTCGCCACCCGAGATCGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117134.2 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTGTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGTTGTACCAGCCCCAGTaGGCACAGACCTGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WLSWCHLIILVPVDSSGWLYQPQ*AQTCRR Trigger: CCTCCTGCAGGTCTGTGCCCACTGGGGCTGGTACAA...CCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGACAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117134.2 |
||
| CDS-3UTR TCA 90 bp | TGGTTGTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGATCCATGTCCTTGGTaGACTCCAGCAGGGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WLSWCHLIILVPVDSSGWDPCPW*TPAGCP Trigger: AGGGCACCCTGCTGGAGTTCACCAAGGACATGGATC...CCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGACAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAAGGTGGGGTCCAGCTTACCCTTGCGCTTCTaGTTCTTTGGGTTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRLGSPISTAASRKVGSSLPLRF*FFGLFP Trigger: AGGAAACAACCCAAAGAATCAGAAGCGCAAGGGTAA...GCTGGACCCCACCTTTCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTGATGCCCTGCTGGGCTaGCTCGTGGAAGAGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FRPECDFQRPRLWWEDQSDALLG*LVEEFL Trigger: CAAGAACTCTTCCACGAGGCAGCCCAGCAGGGCATC...AGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059056.15 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | CCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAAGGTGAGGTGCTCAGAGCAGTaGAGAGTATCTGGGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKVLRLGSPISTAASRKVRCSEQ*RVSGPC Trigger: ACAAGGCCCAGATACTCTGCACTGCTCTGAGCACCT...CACCTTTCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACTGTCCTGGAGCAGGTaGTCAGAGCAGTGCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLVSPDHPGACGLFRLGTLSWSR*SEQCRV Trigger: TACTCTGCACTGCTCTGAGCACCTGCTCCAGGACAG...TGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | TGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACGTGGAATCGGGTGGCGAAGTCTaGATTGTCCTGGGTAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CHLIILVPVDSSGWAHVESGGEV*IVLGKL Trigger: CAGCTTACCCAGGACAATGCAGACTTCGCCACCCGA...TTCCACGTGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTTCGGGTGGCGAAGTCTaGATTGTCCTGGGTAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KQLPKVLRLGSPISTAASSGGEV*IVLGKL Trigger: CAGCTTACCCAGGACAATGCAGACTTCGCCACCCGA...AGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | CAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGATGTTCTGGGTCCAGGTaGGTGAAAGAGCCCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: QLPKVLRLGSPISTAASRCSGSR*VKEPTT Trigger: TGTGGTGGGCTCTTTCACCCACCTGGACCCAGAACA...TCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACAGGGATGACTTTGTCCTaGGCGATGCACTGCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: VLVSPDHPGACGLFRLGTGMTLS*AMHCRI Trigger: GATCCTGCAGTGCATCGCCCAGGACAAAGTCATCCC...TGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | TGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACGTGGAAGGGATGACTTTGTCCTaGGCGATGCACTGCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: CHLIILVPVDSSGWAHVEGMTLS*AMHCRI Trigger: GATCCTGCAGTGCATCGCCCAGGACAAAGTCATCCC...TTCCACGTGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTGTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGCCAGGACAAAGGCCATaGTCACCAAGCTGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WLSWCHLIILVPVDSSGWPGQRP*SPSWSG Trigger: GCCTGACCAGCTTGGTGACCATGGCCTTTGTCCTGG...CCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGACAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACGTGGGTAACGATCTCGGGTaGCGAAGTCTGCATTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WCHLIILVPVDSSGWAHVGNDLG*RSLHCP Trigger: AGGACAATGCAGACTTCGCCACCCGAGATCGTTACC...CACGTGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGGAGGAGTGGTGGTAACGATCTCGGGTGGCGAAGTCTGCATTGTCCTGGGGCAGGAAGGCAAAGATaGTGTAGAGAAACCACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRRSGGNDLGWRSLHCPGAGRQR*CRETTR Trigger: TCTCGTGGTTTCTCTACATCATCTTTGCCTTCCTGC...CCCAGGACAATGCAGACTTCGCCACCCGAGATCGTTACCACCACTCCTCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117134.2 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAACAGGGAGAAGGGGGTTTCTATACTCTGTGGCTTGGGAACCATGTGAGTAGGCGAGTGCAGGGATaGCTTTGTCCTGGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: EKQGEGGFYTLWLGNHVSRRVQG*LCPGRC Trigger: GCATCGCCCAGGACAAAGTCATCCCTGCACTCGCCT...ACTCACATGGTTCCCAAGCCACAGAGTATAGAAACCCCCTTCTCCCTGTTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
||
| CDS-3UTR TCA 90 bp | GAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCGATCCATGTCCTTGGTaGACTCCAGCAGGGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ECDFQRPRLWWEDQSWVFDPCPW*TPAGCP Trigger: AGGGCACCCTGCTGGAGTTCACCAAGGACATGGATC...GAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAAGGTGATTGGCTGGAGGAACTaGTCCATGTCCTTGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PKVLRLGSPISTAASRKVIGWRN*SMSLVN Trigger: GTTCACCAAGGACATGGATCAGTTCCTCCAGCCAAT...CACCTTTCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | AGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGTCTCTTGACCCAAGCTaGCGACTCTCCAGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPECDFQRPRLWWEDQSWSLDPS*RLSSSS Trigger: AGAGGAACTGGAGAGTCGTCAGCTTGGGTCAAGAGA...CCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTTCTCTTGACCCAAGCTaGCGACTCTCCAGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQLPKVLRLGSPISTAASSLDPS*RLSSSS Trigger: AGAGGAACTGGAGAGTCGTCAGCTTGGGTCAAGAGA...AGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | CCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAAGGTGGGTCAGGCAGATGGCTaGTACCGGTGTTTTATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKVLRLGSPISTAASRKVGQADG*YRCFIW Trigger: CCAAATAAAACACCGGTAGCAGCCATCTGCCTGACC...CACCTTTCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | TGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACGTGGAAAGGTGCTCAGAGCAGTaGAGAGTATCTGGGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CHLIILVPVDSSGWAHVERCSEQ*RVSGPC Trigger: ACAAGGCCCAGATACTCTGCACTGCTCTGAGCACCT...TTCCACGTGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | AATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTGGCGCCAAGATGATTTaGTCCTGGGCGGACCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NVISSVQGCGGKTSLGFSGAKMI*SWADLR Trigger: CCTGAGGTCCGCCCAGGAGCAAATCATCTTGGCGCC...AGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | GTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATGGCGCCAAGATGATTTaGTCCTGGGCGGACCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VISSVQGCGGKTSLGFSYGAKMI*SWADLR Trigger: CCTGAGGTCCGCCCAGGAGCAAATCATCTTGGCGCC...ATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | TTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACGGCGCCAAGATGATTTaGTCCTGGGCGGACCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVEATSKGSEAWVPHLHGAKMI*SWADLR Trigger: CCTGAGGTCCGCCCAGGAGCAAATCATCTTGGCGCC...GTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | CAACCACATGGTGGCTCACAACCATCTGTAATGGGATCCGATGCCCTCTTCTGGGGGATGACTTTGTCCTaGGCGATGCACTGCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QPHGGSQPSVMGSDALFWGMTLS*AMHCRI Trigger: GATCCTGCAGTGCATCGCCCAGGACAAAGTCATCCC...CCAGAAGAGGGCATCGGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | ACGATCTCGGGTGGCGAAGTCTGCATTGTCCTGGGTAAGCTGAGTCATTGCCATGGGATGACTTTGTCCTaGGCGATGCACTGCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: TISGGEVCIVLGKLSHCHGMTLS*AMHCRI Trigger: GATCCTGCAGTGCATCGCCCAGGACAAAGTCATCCC...ATGGCAATGACTCAGCTTACCCAGGACAATGCAGACTTCGCCACCCGAGATCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117134.2 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACGTGGAAGCTGGTCAGGCAGATaGCTGCTACCGGTGTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VSPDHPGACGLFRLGTRGSWSGR*LLPVFY Trigger: ATAAAACACCGGTAGCAGCCATCTGCCTGACCAGCT...TCCACGTGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS-3UTR CCA 90 bp | AATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTGCAGTGCAGAGTATCTaGGCCTTGTCTGGGGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: NVISSVQGCGGKTSLGFSAVQSI*ALSGDG Trigger: CCCGTCCCCAGACAAGGCCCAGATACTCTGCACTGC...AGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR CCA 90 bp | TTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTGCAGTGCAGAGTATCTaGGCCTTGTCTGGGGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: FPASKAVVGRPVLGFLIGAVQSI*ALSGDG Trigger: CCCGTCCCCAGACAAGGCCCAGATACTCTGCACTGC...ACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR CCA 90 bp | GATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGCATCAGAGCCGTAGCTaGGAGCCCTGTCCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DFQRPRLWWEDQSWVFLLHQSRS*EPCPGA Trigger: TGCTCCAGGACAGGGCTCCCAGCTACGGCTCTGATG...CAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR CCA 90 bp | AGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGGTAACGATCTCGGGTaGCGAAGTCTGCATTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPECDFQRPRLWWEDQSWGNDLG*RSLHCP Trigger: AGGACAATGCAGACTTCGCCACCCGAGATCGTTACC...CCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS-3UTR TCA 90 bp | CAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAATTGGCTGGAGGAACTaGTCCATGTCCTTGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QLPKVLRLGSPISTAASRIGWRN*SMSLVN Trigger: GTTCACCAAGGACATGGATCAGTTCCTCCAGCCAAT...TCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR TCA 90 bp | TTCAGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTCTCTTGACCCAAGCTaGCGACTCTCCAGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRPECDFQRPRLWWEDQSSLDPS*RLSSSS Trigger: AGAGGAACTGGAGAGTCGTCAGCTTGGGTCAAGAGA...AGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR TCA 90 bp | TGGTTGTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGTCTCTTGACCCAAGCTaGCGACTCTCCAGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WLSWCHLIILVPVDSSGWSLDPS*RLSSSS Trigger: AGAGGAACTGGAGAGTCGTCAGCTTGGGTCAAGAGA...CCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGACAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR TCA 90 bp | AGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGTTGTCCTGGGTAAGCTaGGTCATTGCCATGTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: RPECDFQRPRLWWEDQSWLSWVS*VIAMST Trigger: GGTTGACATGGCAATGACTCAGCTTACCCAGGACAA...CCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCACAGTGCCTCCCATCTaGCCACCAAGCACCGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WVFLLVEATSKGSEAWVPTVPPI*PPSTEE Trigger: CTCCTCGGTGCTTGGTGGGCAGATGGGAGGCACTGT...GGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS-3UTR GCA 90 bp | TGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACGTGGAAAATCCACTTGACACCTaGCAGGTTGATGCCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CHLIILVPVDSSGWAHVENPLDT*QVDAQQ Trigger: TTGCTGGGCATCAACCTGGCAGGTGTCAAGTGGATT...TTCCACGTGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 |
||
| CDS-3UTR GCA 90 bp | CAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAACTCTGGCAGAATGTTaGTCTGTAGCAGTTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLPKVLRLGSPISTAASRTLAEC*SVAVLG Trigger: CCCCAGAACTGCTACAGAGCAACATTCTGCCAGAGT...TCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCAGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTGTCCTGGAGCAGGTaGTCAGAGCAGTGCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ISDRNVISSVQGCGGKTSLSWSR*SEQCRV Trigger: TACTCTGCACTGCTCTGAGCACCTGCTCCAGGACAG...ACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCTGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCGGACCTCAGGCTCCTaGAGGAGGGGACCAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KAVVGRPVLGFLIGRSNFRTSGS*RRGPRR Trigger: CCTTCTTGGTCCCCTCCTGCAGGAGCCTGAGGTCCG...GAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | CCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTGGTAAGCTGAGTCATTaGCATGTCAACCTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PECDFQRPRLWWEDQSWVGKLSH*HVNLGW Trigger: CCAGCCAAGGTTGACATGGCAATGACTCAGCTTACC...AACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | GAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTCCCACATGAACAGCTaGATCTTCCACCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ECDFQRPRLWWEDQSWVFSHMNS*IFHQGW Trigger: CCAGCCCTGGTGGAAGATCCAGCTGTTCATGTGGGA...GAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059056.15 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTTCCCACATGAACAGCTaGATCTTCCACCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISDRNVISSVQGCGGKTSSHMNS*IFHQGW Trigger: CCAGCCCTGGTGGAAGATCCAGCTGTTCATGTGGGA...ACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCTGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059056.15 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGGCACCGAGGAGATCATaGAGTAGACACCGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISSVQGCGGKTSLGFSYWAPRRS*SRHRHC Trigger: GCAGTGGCGGTGTCTACTCCATGATCTCCTCGGTGC...CCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | GTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATGCACCGAGGAGATCATaGAGTAGACACCGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VISSVQGCGGKTSLGFSYAPRRS*SRHRHC Trigger: GCAGTGGCGGTGTCTACTCCATGATCTCCTCGGTGC...ATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACGTGTACCGGTGTTTTATTTaGCCCTTTCCCATTCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WCHLIILVPVDSSGWAHVYRCFI*PFPIRQ Trigger: CTGGCGAATGGGAAAGGGCCAAATAAAACACCGGTA...CACGTGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | GATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGCCAGGACAAAGGCCATaGTCACCAAGCTGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DFQRPRLWWEDQSWVFLLPGQRP*SPSWSG Trigger: GCCTGACCAGCTTGGTGACCATGGCCTTTGTCCTGG...CAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | GTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCCTCCAGTTCCTCTATTaGCTGGAGGAACTGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VEATSKGSEAWVPHLHSGLQFLY*LEELIH Trigger: ATGGATCAGTTCCTCCAGCCAATAGAGGAACTGGAG...GCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCGCACCGGCTCCCACATaGACAGCTGGATCTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KAVVGRPVLGFLIGRSNFAPAPT*TAGSST Trigger: GGTGGAAGATCCAGCTGTTCATGTGGGAGCCGGTGC...GAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059056.15 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCAGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTTCTCTTGACCCAAGCTaGCGACTCTCCAGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISDRNVISSVQGCGGKTSSLDPS*RLSSSS Trigger: AGAGGAACTGGAGAGTCGTCAGCTTGGGTCAAGAGA...ACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCTGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGGAGGAGTGGTGGTAACGATCTCGGGTGGCGAAGTCTGCATTGTCCTGTTACCCTTGCGCTTCTaGTTCTTTGGGTTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QEGGVVVTISGGEVCIVLLPLRF*FFGLFP Trigger: AGGAAACAACCCAAAGAATCAGAAGCGCAAGGGTAA...CAGGACAATGCAGACTTCGCCACCCGAGATCGTTACCACCACTCCTCCTTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117134.2 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATGTGATGGCGCCAAGATaGTTTGCTCCTGGGCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VFLLVEATSKGSEAWVPHVMAPR*FAPGRT Trigger: GGTCCGCCCAGGAGCAAATCATCTTGGCGCCATCAC...ATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTGTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGCATGACTCCTGTAGCTaGAGGGAAGAACACCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WLSWCHLIILVPVDSSGWHDSCS*REEHPK Trigger: TTTGGGGTGTTCTTCCCTGCAGCTACAGGAGTCATG...CCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGACAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 |
||
| CDS-3UTR GCA 90 bp | TTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACCTGTCCTGGAGCAGGTaGTCAGAGCAGTGCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLVEATSKGSEAWVPHLHLSWSR*SEQCRV Trigger: TACTCTGCACTGCTCTGAGCACCTGCTCCAGGACAG...GTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | AATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTCTGTCCTGGAGCAGGTaGTCAGAGCAGTGCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NVISSVQGCGGKTSLGFSLSWSR*SEQCRV Trigger: TACTCTGCACTGCTCTGAGCACCTGCTCCAGGACAG...AGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTCTATCTTGTAGGGTTTaGTTGGCGCCTTTCTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: KQLPKVLRLGSPISTAASLSCRV*LAPFLP Trigger: GGGTAAGAAAGGCGCCAAGCAAACCCTACAAGATAG...AGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | CAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGACTATCTTGTAGGGTTTaGTTGGCGCCTTTCTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: QLPKVLRLGSPISTAASRLSCRV*LAPFLP Trigger: GGGTAAGAAAGGCGCCAAGCAAACCCTACAAGATAG...TCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACGTGGTAAAGGCCTGGACTTaGCTGGCCAATGTAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: WCHLIILVPVDSSGWAHVVKAWT*LANVEI Trigger: TATTTCTACATTGGCCAGGCAAGTCCAGGCCTTTAC...CACGTGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | TTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACTCGGGTGGCGAAGTCTaGATTGTCCTGGGTAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLVEATSKGSEAWVPHLHSGGEV*IVLGKL Trigger: CAGCTTACCCAGGACAATGCAGACTTCGCCACCCGA...GTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | AATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTCGGGTGGCGAAGTCTaGATTGTCCTGGGTAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NVISSVQGCGGKTSLGFSSGGEV*IVLGKL Trigger: CAGCTTACCCAGGACAATGCAGACTTCGCCACCCGA...AGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCTGCTGGGCTGCCTCGTaGAAGAGTTCTTGCGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WVFLLVEATSKGSEAWVPCWAAS*KSSCGD Trigger: GTCTCCGCAAGAACTCTTCCACGAGGCAGCCCAGCA...GGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059056.15 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | GTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGTTCTGGGTCCAGGTaGGTGAAAGAGCCCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: VISSVQGCGGKTSLGFSYCSGSR*VKEPTT Trigger: TGTGGTGGGCTCTTTCACCCACCTGGACCCAGAACA...ATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCATCAGAGCCGTAGCTaGGAGCCCTGTCCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFLLVEATSKGSEAWVPHHQSRS*EPCPGA Trigger: TGCTCCAGGACAGGGCTCCCAGCTACGGCTCTGATG...ATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACTCCAGTTCCTCTATTaGCTGGAGGAACTGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLVSPDHPGACGLFRLGTLQFLY*LEELIH Trigger: ATGGATCAGTTCCTCCAGCCAATAGAGGAACTGGAG...TGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTTTGCCATGTCAACCTTaGCTGGTGATGGCGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISDRNVISSVQGCGGKTSLPCQP*LVMAPR Trigger: TCTTGGCGCCATCACCAGCCAAGGTTGACATGGCAA...ACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCTGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | GAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTGCCATGTCAACCTTaGCTGGTGATGGCGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ECDFQRPRLWWEDQSWVFLPCQP*LVMAPR Trigger: TCTTGGCGCCATCACCAGCCAAGGTTGACATGGCAA...GAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCGCACCGGCTCCCACATaGACAGCTGGATCTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VGRPVLGFLIGRSNFQRFAPAPT*TAGSST Trigger: GGTGGAAGATCCAGCTGTTCATGTGGGAGCCGGTGC...GAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059056.15 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTGTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCAGGAAGGCAAAGATaGTGTAGAGAAACCACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WLSWCHLIILVPVDSSGWAGRQR*CRETTR Trigger: TCTCGTGGTTTCTCTACATCATCTTTGCCTTCCTGC...CCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGACAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR TCA 90 bp | GAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCATTGGCTGGAGGAACTaGTCCATGTCCTTGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ECDFQRPRLWWEDQSWVFIGWRN*SMSLVN Trigger: GTTCACCAAGGACATGGATCAGTTCCTCCAGCCAAT...GAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTTCTCTTGACCCAAGCTaGCGACTCTCCAGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPASKAVVGRPVLGFLIGSLDPS*RLSSSS Trigger: AGAGGAACTGGAGAGTCGTCAGCTTGGGTCAAGAGA...ACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | CAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGATTACCCTTGCGCTTCTaGTTCTTTGGGTTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLPKVLRLGSPISTAASRLPLRF*FFGLFP Trigger: AGGAAACAACCCAAAGAATCAGAAGCGCAAGGGTAA...TCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAAGGTGTGGATCTCTTGTTCCTaGAGTCTGCATTTCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PKVLRLGSPISTAASRKVWISCS*SLHFRK Trigger: CTTTCTGAAATGCAGACTTCAGGAACAAGAGATCCA...CACCTTTCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAGATGCCCTGCTGGGCTaGCTCGTGGAAGAGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AVVGRPVLGFLIGRSNFQDALLG*LVEEFL Trigger: CAAGAACTCTTCCACGAGGCAGCCCAGCAGGGCATC...TTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059056.15 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCAGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCATGACTCCTGTAGCTaGAGGGAAGAACACCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISDRNVISSVQGCGGKTSHDSCS*REEHPK Trigger: TTTGGGGTGTTCTTCCCTGCAGCTACAGGAGTCATG...ACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCTGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTTGTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGCATGACTCCTGTAGCTaGAGGGAAGAACACCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVVLVSPDHPGACGLFRLHDSCS*REEHPK Trigger: TTTGGGGTGTTCTTCCCTGCAGCTACAGGAGTCATG...CAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGACAACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 |
||
| CDS-3UTR GCA 90 bp | TTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGGTGCTCAGAGCAGTaGAGAGTATCTGGGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVEATSKGSEAWVPHLHRCSEQ*RVSGPC Trigger: ACAAGGCCCAGATACTCTGCACTGCTCTGAGCACCT...GTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAAGGTGGGGTCCAGCCTTGTTCCTGAAGTCTaGATTTCAGAAAGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRLGSPISTAASRKVGSSLVPEV*ISERNL Trigger: AAGATTTCTTTCTGAAATGCAGACTTCAGGAACAAG...GCTGGACCCCACCTTTCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCCATCAGAGCCGTAGCTaGGAGCCCTGTCCTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGRPVLGFLIGRSNFQRFHQSRS*EPCPGA Trigger: TGCTCCAGGACAGGGCTCCCAGCTACGGCTCTGATG...GAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGCACCGGCTCCCACATaGACAGCTGGATCTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: WEDQSWVFLLVEATSKGSAPAPT*TAGSST Trigger: GGTGGAAGATCCAGCTGTTCATGTGGGAGCCGGTGC...AGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059056.15 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTAGGCGAGTGCAGGGATaGCTTTGTCCTGGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: WEDQSWVFLLVEATSKGSRRVQG*LCPGRC Trigger: GCATCGCCCAGGACAAAGTCATCCCTGCACTCGCCT...AGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | GACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTGATCCATGTCCTTGGTaGACTCCAGCAGGGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DQSWVFLLVEATSKGSEADPCPW*TPAGCP Trigger: AGGGCACCCTGCTGGAGTTCACCAAGGACATGGATC...AGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTATTGGCTGGAGGAACTaGTCCATGTCCTTGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FPASKAVVGRPVLGFLIGIGWRN*SMSLVN Trigger: GTTCACCAAGGACATGGATCAGTTCCTCCAGCCAAT...ACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | GATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGATTGGCTGGAGGAACTaGTCCATGTCCTTGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DFQRPRLWWEDQSWVFLLIGWRN*SMSLVN Trigger: GTTCACCAAGGACATGGATCAGTTCCTCCAGCCAAT...CAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | CCAAACAGTAACAGCTTACAAATGTACATCCCCAGTCACCCTGTAATTCTCCTTGTGATGGCGCCAAGATaGTTTGCTCCTGGGCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PNSNSLQMYIPSHPVILLVMAPR*FAPGRT Trigger: GGTCCGCCCAGGAGCAAATCATCTTGGCGCCATCAC...AAGGAGAATTACAGGGTGACTGGGGATGTACATTTGTAAGCTGTTACTGTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | TCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCGATGCCCTGCTGGGCTaGCTCGTGGAAGAGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SWVFLLVEATSKGSEAWVDALLG*LVEEFL Trigger: CAAGAACTCTTCCACGAGGCAGCCCAGCAGGGCATC...GACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059056.15 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | CCAAACAGTAACAGCTTACAAATGTACATCCCCAGTCACCCTGTAATTCTCCTTACAGTGCCTCCCATCTaGCCACCAAGCACCGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PNSNSLQMYIPSHPVILLTVPPI*PPSTEE Trigger: CTCCTCGGTGCTTGGTGGGCAGATGGGAGGCACTGT...AAGGAGAATTACAGGGTGACTGGGGATGTACATTTGTAAGCTGTTACTGTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059056.15 |
||
| CDS-3UTR GCA 90 bp | ATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGAATCCACTTGACACCTaGCAGGTTGATGCCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISSVQGCGGKTSLGFSYWNPLDT*QVDAQQ Trigger: TTGCTGGGCATCAACCTGGCAGGTGTCAAGTGGATT...CCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | GATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGAATCCACTTGACACCTaGCAGGTTGATGCCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DFQRPRLWWEDQSWVFLLNPLDT*QVDAQQ Trigger: TTGCTGGGCATCAACCTGGCAGGTGTCAAGTGGATT...CAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTACTCTGGCAGAATGTTaGTCTGTAGCAGTTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FPASKAVVGRPVLGFLIGTLAEC*SVAVLG Trigger: CCCCAGAACTGCTACAGAGCAACATTCTGCCAGAGT...ACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | TTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACACTCTGGCAGAATGTTaGTCTGTAGCAGTTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVEATSKGSEAWVPHLHTLAEC*SVAVLG Trigger: CCCCAGAACTGCTACAGAGCAACATTCTGCCAGAGT...GTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | GATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGCATGACTCCTGTAGCTaGAGGGAAGAACACCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DFQRPRLWWEDQSWVFLLHDSCS*REEHPK Trigger: TTTGGGGTGTTCTTCCCTGCAGCTACAGGAGTCATG...CAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | TGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTAGGTAAGCTGAGTCATTaGCATGTCAACCTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CDFQRPRLWWEDQSWVFLGKLSH*HVNLGW Trigger: CCAGCCAAGGTTGACATGGCAATGACTCAGCTTACC...TAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | AATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTGGTAAGCTGAGTCATTaGCATGTCAACCTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NVISSVQGCGGKTSLGFSGKLSH*HVNLGW Trigger: CCAGCCAAGGTTGACATGGCAATGACTCAGCTTACC...AGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | TTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACGGTAAGCTGAGTCATTaGCATGTCAACCTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVEATSKGSEAWVPHLHGKLSH*HVNLGW Trigger: CCAGCCAAGGTTGACATGGCAATGACTCAGCTTACC...GTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCGGGATGACTTTGTCCTaGGCGATGCACTGCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KAVVGRPVLGFLIGRSNFGMTLS*AMHCRI Trigger: GATCCTGCAGTGCATCGCCCAGGACAAAGTCATCCC...GAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | AATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTAGCTGGTCAGGCAGATaGCTGCTACCGGTGTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: NVISSVQGCGGKTSLGFSSWSGR*LLPVFY Trigger: ATAAAACACCGGTAGCAGCCATCTGCCTGACCAGCT...AGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGAGCTGGTCAGGCAGATaGCTGCTACCGGTGTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ISSVQGCGGKTSLGFSYWSWSGR*LLPVFY Trigger: ATAAAACACCGGTAGCAGCCATCTGCCTGACCAGCT...CCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | GATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGAGCTGGTCAGGCAGATaGCTGCTACCGGTGTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: DFQRPRLWWEDQSWVFLLSWSGR*LLPVFY Trigger: ATAAAACACCGGTAGCAGCCATCTGCCTGACCAGCT...CAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGCAGTGCAGAGTATCTaGGCCTTGTCTGGGGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: WEDQSWVFLLVEATSKGSAVQSI*ALSGDG Trigger: CCCGTCCCCAGACAAGGCCCAGATACTCTGCACTGC...AGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | GAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCCTCCAGTTCCTCTATTaGCTGGAGGAACTGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ECDFQRPRLWWEDQSWVFLQFLY*LEELIH Trigger: ATGGATCAGTTCCTCCAGCCAATAGAGGAACTGGAG...GAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCAAACAGTAACAGCTTACAAATGTACATCCCCAGTCACCCTGTAATTCTCGATCCATGTCCTTGGTaGACTCCAGCAGGGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPNSNSLQMYIPSHPVILDPCPW*TPAGCP Trigger: AGGGCACCCTGCTGGAGTTCACCAAGGACATGGATC...GAGAATTACAGGGTGACTGGGGATGTACATTTGTAAGCTGTTACTGTTTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGATCCATGTCCTTGGTaGACTCCAGCAGGGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WEDQSWVFLLVEATSKGSDPCPW*TPAGCP Trigger: AGGGCACCCTGCTGGAGTTCACCAAGGACATGGATC...AGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | TCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTGTCCTGGGTAAGCTaGGTCATTGCCATGTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: SKAVVGRPVLGFLIGRSNLSWVS*VIAMST Trigger: GGTTGACATGGCAATGACTCAGCTTACCCAGGACAA...GTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | GACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTCTGTCCTGGAGCAGGTaGTCAGAGCAGTGCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: DQSWVFLLVEATSKGSEALSWSR*SEQCRV Trigger: TACTCTGCACTGCTCTGAGCACCTGCTCCAGGACAG...AGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | CCAAACAGTAACAGCTTACAAATGTACATCCCCAGTCACCCTGTAATTCTCCTTCCAGGACAAAGGCCATaGTCACCAAGCTGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PNSNSLQMYIPSHPVILLPGQRP*SPSWSG Trigger: GCCTGACCAGCTTGGTGACCATGGCCTTTGTCCTGG...AAGGAGAATTACAGGGTGACTGGGGATGTACATTTGTAAGCTGTTACTGTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | AATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTCTCCAGTTCCTCTATTaGCTGGAGGAACTGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NVISSVQGCGGKTSLGFSLQFLY*LEELIH Trigger: ATGGATCAGTTCCTCCAGCCAATAGAGGAACTGGAG...AGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATGGTAACGATCTCGGGTaGCGAAGTCTGCATTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFLLVEATSKGSEAWVPHGNDLG*RSLHCP Trigger: AGGACAATGCAGACTTCGCCACCCGAGATCGTTACC...ATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| 3UTR CAA 72 bp | AGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATaGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLWWEDQSWVFL*VEATSKGSEAW Trigger: CCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| 3UTR CAA 72 bp | TTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTaGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPASKAVVGRPV*GFLIGRSNFQR Trigger: CCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | GTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTTACCCTTGCGCTTCTaGTTCTTTGGGTTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VISSVQGCGGKTSLGFSYLPLRF*FFGLFP Trigger: AGGAAACAACCCAAAGAATCAGAAGCGCAAGGGTAA...ATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | GAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTGGATCTCTTGTTCCTaGAGTCTGCATTTCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ECDFQRPRLWWEDQSWVFWISCS*SLHFRK Trigger: CTTTCTGAAATGCAGACTTCAGGAACAAGAGATCCA...GAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGACTCTGGCAGAATGTTaGTCTGTAGCAGTTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVGRPVLGFLIGRSNFQRTLAEC*SVAVLG Trigger: CCCCAGAACTGCTACAGAGCAACATTCTGCCAGAGT...CCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAGGTCAGGCAGATGGCTaGTACCGGTGTTTTATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVVGRPVLGFLIGRSNFQGQADG*YRCFIW Trigger: CCAAATAAAACACCGGTAGCAGCCATCTGCCTGACC...TTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | GACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTAGGTGCTCAGAGCAGTaGAGAGTATCTGGGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DQSWVFLLVEATSKGSEARCSEQ*RVSGPC Trigger: ACAAGGCCCAGATACTCTGCACTGCTCTGAGCACCT...AGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACGTGCTTGTTCCTGAAGTCTaGATTTCAGAAAGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: WCHLIILVPVDSSGWAHVLVPEV*ISERNL Trigger: AAGATTTCTTTCTGAAATGCAGACTTCAGGAACAAG...CACGTGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | TTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACGTAAAGGCCTGGACTTaGCTGGCCAATGTAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LLVEATSKGSEAWVPHLHVKAWT*LANVEI Trigger: TATTTCTACATTGGCCAGGCAAGTCCAGGCCTTTAC...GTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | GTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATGTAAAGGCCTGGACTTaGCTGGCCAATGTAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: VISSVQGCGGKTSLGFSYVKAWT*LANVEI Trigger: TATTTCTACATTGGCCAGGCAAGTCCAGGCCTTTAC...ATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCAAACAGTAACAGCTTACAAATGTACATCCCCAGTCACCCTGTAATTCTCTCCCACATGAACAGCTaGATCTTCCACCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPNSNSLQMYIPSHPVILSHMNS*IFHQGW Trigger: CCAGCCCTGGTGGAAGATCCAGCTGTTCATGTGGGA...GAGAATTACAGGGTGACTGGGGATGTACATTTGTAAGCTGTTACTGTTTGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059056.15 |
||
| CDS-3UTR CCA 90 bp | ATTTATCTTCAGGTATCCTTCACGACTGTGCACACAAACACAGTGACTCTTTGCTGTTCTGGGTCCAGGTaGGTGAAAGAGCCCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: IYLQVSFTTVHTNTVTLCCSGSR*VKEPTT Trigger: TGTGGTGGGCTCTTTCACCCACCTGGACCCAGAACA...GCAAAGAGTCACTGTGTTTGTGTGCACAGTCGTGAAGGATACCTGAAGATAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059056.15 |
||
| CDS-3UTR CCA 90 bp | TCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCTTGCCATGTCAACCTTaGCTGGTGATGGCGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SWVFLLVEATSKGSEAWVLPCQP*LVMAPR Trigger: TCTTGGCGCCATCACCAGCCAAGGTTGACATGGCAA...GACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | GACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTGGTAACGATCTCGGGTaGCGAAGTCTGCATTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DQSWVFLLVEATSKGSEAGNDLG*RSLHCP Trigger: AGGACAATGCAGACTTCGCCACCCGAGATCGTTACC...AGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGAATCCACTTGACACCTaGCAGGTTGATGCCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSWVFLLVEATSKGSEAWNPLDT*QVDAQQ Trigger: TTGCTGGGCATCAACCTGGCAGGTGTCAAGTGGATT...CCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCAAACAGTAACAGCTTACAAATGTACATCCCCAGTCACCCTGTAATTCTCAGGTGCTCAGAGCAGTaGAGAGTATCTGGGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPNSNSLQMYIPSHPVILRCSEQ*RVSGPC Trigger: ACAAGGCCCAGATACTCTGCACTGCTCTGAGCACCT...GAGAATTACAGGGTGACTGGGGATGTACATTTGTAAGCTGTTACTGTTTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAACTATCTTGTAGGGTTTaGTTGGCGCCTTTCTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: AVVGRPVLGFLIGRSNFQLSCRV*LAPFLP Trigger: GGGTAAGAAAGGCGCCAAGCAAACCCTACAAGATAG...TTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCTATCTTGTAGGGTTTaGTTGGCGCCTTTCTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: KAVVGRPVLGFLIGRSNFLSCRV*LAPFLP Trigger: GGGTAAGAAAGGCGCCAAGCAAACCCTACAAGATAG...GAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTATCTTGTAGGGTTTaGTTGGCGCCTTTCTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: VFLLVEATSKGSEAWVPHLSCRV*LAPFLP Trigger: GGGTAAGAAAGGCGCCAAGCAAACCCTACAAGATAG...ATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTCTTGTTCCTGAAGTCTaGATTTCAGAAAGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQLPKVLRLGSPISTAASLVPEV*ISERNL Trigger: AAGATTTCTTTCTGAAATGCAGACTTCAGGAACAAG...AGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTACCGGTGTTTTATTTaGCCCTTTCCCATTCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVGRPVLGFLIGRSNFQRYRCFI*PFPIRQ Trigger: CTGGCGAATGGGAAAGGGCCAAATAAAACACCGGTA...CCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCTACCGGTGTTTTATTTaGCCCTTTCCCATTCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KAVVGRPVLGFLIGRSNFYRCFI*PFPIRQ Trigger: CTGGCGAATGGGAAAGGGCCAAATAAAACACCGGTA...GAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | CAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAAGGACTTCATCCATTaGAAAAAGCTGAAGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QLPKVLRLGSPISTAASRKDFIH*KKLKFD Trigger: ATCAAACTTCAGCTTTTTCCAATGGATGAAGTCCTT...TCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAAGGACTTCATCCATTaGAAAAAGCTGAAGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KQLPKVLRLGSPISTAASKDFIH*KKLKFD Trigger: ATCAAACTTCAGCTTTTTCCAATGGATGAAGTCCTT...AGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCAAACAGTAACAGCTTACAAATGTACATCCCCAGTCACCCTGTAATTCTCTTGCCATGTCAACCTTaGCTGGTGATGGCGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPNSNSLQMYIPSHPVILLPCQP*LVMAPR Trigger: TCTTGGCGCCATCACCAGCCAAGGTTGACATGGCAA...GAGAATTACAGGGTGACTGGGGATGTACATTTGTAAGCTGTTACTGTTTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
||
| CDS-3UTR TCA 90 bp | GTGCACACAAACACAGTGACTCTTTGCAGAAGCGGCTGTAATAGCAAAATATCAATTGGCTGGAGGAACTaGTCCATGTCCTTGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VHTNTVTLCRSGCNSKISIGWRN*SMSLVN Trigger: GTTCACCAAGGACATGGATCAGTTCCTCCAGCCAAT...TGATATTTTGCTATTACAGCCGCTTCTGCAAAGAGTCACTGTGTTTGTGTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
||
| CDS-3UTR TCA 90 bp | GAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGTTGTCCTGGGTAAGCTaGGTCATTGCCATGTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: EDQSWVFLLVEATSKGSELSWVS*VIAMST Trigger: GGTTGACATGGCAATGACTCAGCTTACCCAGGACAA...CTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | GAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGGTCAGGCAGATGGCTaGTACCGGTGTTTTATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EDQSWVFLLVEATSKGSEGQADG*YRCFIW Trigger: CCAAATAAAACACCGGTAGCAGCCATCTGCCTGACC...CTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | GACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTACCGGTGTTTTATTTaGCCCTTTCCCATTCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DQSWVFLLVEATSKGSEAYRCFI*PFPIRQ Trigger: CTGGCGAATGGGAAAGGGCCAAATAAAACACCGGTA...AGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCTCCAGTTCCTCTATTaGCTGGAGGAACTGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SWVFLLVEATSKGSEAWVLQFLY*LEELIH Trigger: ATGGATCAGTTCCTCCAGCCAATAGAGGAACTGGAG...GACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR TCA 90 bp | GTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTTACCCTTGCGCTTCTaGTTCTTTGGGTTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VGRPVLGFLIGRSNFQRFLPLRF*FFGLFP Trigger: AGGAAACAACCCAAAGAATCAGAAGCGCAAGGGTAA...GAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR TCA 90 bp | GACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTTACCCTTGCGCTTCTaGTTCTTTGGGTTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DQSWVFLLVEATSKGSEALPLRF*FFGLFP Trigger: AGGAAACAACCCAAAGAATCAGAAGCGCAAGGGTAA...AGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTGGATCTCTTGTTCCTaGAGTCTGCATTTCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VVGRPVLGFLIGRSNFQRWISCS*SLHFRK Trigger: CTTTCTGAAATGCAGACTTCAGGAACAAGAGATCCA...CCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR GCA 90 bp | ATTTCAGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGTTCCTGAAGTCTaGATTTCAGAAAGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISDRNVISSVQGCGGKTSLVPEV*ISERNL Trigger: AAGATTTCTTTCTGAAATGCAGACTTCAGGAACAAG...ACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCTGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGTAAAGGCCTGGACTTaGCTGGCCAATGTAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LWWEDQSWVFLLVEATSKVKAWT*LANVEI Trigger: TATTTCTACATTGGCCAGGCAAGTCCAGGCCTTTAC...TTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS-3UTR GCA 90 bp | GTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCGTAAAGGCCTGGACTTaGCTGGCCAATGTAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: VGRPVLGFLIGRSNFQRFVKAWT*LANVEI Trigger: TATTTCTACATTGGCCAGGCAAGTCCAGGCCTTTAC...GAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS-3UTR CCA 90 bp | GACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTAATAAAGCCATGTTCTaGGTCCAGGTGGGTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DQSWVFLLVEATSKGSEANKAMF*VQVGER Trigger: TCTTTCACCCACCTGGACCCAGAACATGGCTTTATT...AGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS-3UTR CCA 90 bp | TCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCAATAAAGCCATGTTCTaGGTCCAGGTGGGTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SWVFLLVEATSKGSEAWVNKAMF*VQVGER Trigger: TCTTTCACCCACCTGGACCCAGAACATGGCTTTATT...GACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS-3UTR CCA 90 bp | TCTCCAAACAGTAACAGCTTACAAATGTACATCCCCAGTCACCCTGTAATTCTCCTCCAGTTCCTCTATTaGCTGGAGGAACTGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPNSNSLQMYIPSHPVILLQFLY*LEELIH Trigger: ATGGATCAGTTCCTCCAGCCAATAGAGGAACTGGAG...GAGAATTACAGGGTGACTGGGGATGTACATTTGTAAGCTGTTACTGTTTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059056.15 ENSMUST00000122314.8 |
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| CDS-3UTR TCA 90 bp | TCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCTGGATCTCTTGTTCCTaGAGTCTGCATTTCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SWVFLLVEATSKGSEAWVWISCS*SLHFRK Trigger: CTTTCTGAAATGCAGACTTCAGGAACAAGAGATCCA...GACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR TCA 90 bp | CAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGTGGATCTCTTGTTCCTaGAGTCTGCATTTCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSWVFLLVEATSKGSEAWWISCS*SLHFRK Trigger: CTTTCTGAAATGCAGACTTCAGGAACAAGAGATCCA...CCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR GCA 90 bp | TGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTACTTGTTCCTGAAGTCTaGATTTCAGAAAGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CDFQRPRLWWEDQSWVFLLVPEV*ISERNL Trigger: AAGATTTCTTTCTGAAATGCAGACTTCAGGAACAAG...TAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR CCA 90 bp | GAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGAATAAAGCCATGTTCTaGGTCCAGGTGGGTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EDQSWVFLLVEATSKGSENKAMF*VQVGER Trigger: TCTTTCACCCACCTGGACCCAGAACATGGCTTTATT...CTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| 3UTR CAA 72 bp | AGAATAAGAAATCTCGTTTTGATTCTCCACATTTGGTaGTCTTGGTGTCACCTGATCATCCTGGTGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RIRNLVLILHIW*SWCHLIILVPV Trigger: CACAGGCACCAGGATGATCAGGTGACACCAAGACAACCAAATGTGGAGAATCAAAACGAGATTTCTTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS-3UTR TCA 90 bp | TGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTTGGATCTCTTGTTCCTaGAGTCTGCATTTCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WEDQSWVFLLVEATSKGSWISCS*SLHFRK Trigger: CTTTCTGAAATGCAGACTTCAGGAACAAGAGATCCA...AGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACAAGGACTTCATCCATTaGAAAAAGCTGAAGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SKAVVGRPVLGFLIGRSNKDFIH*KKLKFD Trigger: ATCAAACTTCAGCTTTTTCCAATGGATGAAGTCCTT...GTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCAAGGACTTCATCCATTaGAAAAAGCTGAAGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VGRPVLGFLIGRSNFQRFKDFIH*KKLKFD Trigger: ATCAAACTTCAGCTTTTTCCAATGGATGAAGTCCTT...GAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTCTTGTTCCTGAAGTCTaGATTTCAGAAAGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: WEDQSWVFLLVEATSKGSLVPEV*ISERNL Trigger: AAGATTTCTTTCTGAAATGCAGACTTCAGGAACAAG...AGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CCA 90 bp | GAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGAAGGACTTCATCCATTaGAAAAAGCTGAAGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EDQSWVFLLVEATSKGSEKDFIH*KKLKFD Trigger: ATCAAACTTCAGCTTTTTCCAATGGATGAAGTCCTT...CTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS CCA 90 bp | CCTGGAGCAGGTGCTCAGAGCAGTGCAGAGTATCTGGGCCTTGTCTaGGGACGGGCTCAGGAGATGGGGCGAGGCCACAGTGAGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PGAGAQSSAEYLGLV*GRAQEMGRGHSEPW Trigger: CCATGGCTCACTGTGGCCTCGCCCCATCTCCTGAGCCCGTCCCCAGACAAGGCCCAGATACTCTGCACTGCTCTGAGCACCTGCTCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS GCA 90 bp | GGAGATCATGGAGTAGACACCGCCACTGCTGATCCCGCCATGCTCTaGGACACCAATGCCCGACAGCACGGTGATGAGGGCCACGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GDHGVDTATADPAML*DTNARQHGDEGHED Trigger: GTCCTCGTGGCCCTCATCACCGTGCTGTCGGGCATTGGTGTCGCAGAGCATGGCGGGATCAGCAGTGGCGGTGTCTACTCCATGATCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS CCA 90 bp | GGGTGCCCTCAGAGAGGCTTCTGGCAGGGACATCAGAGCCGTAGCTaGGAGCCCTGTCCTGGAGCAGGTGCTCAGAGCAGTGCAGAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GCPQRGFWQGHQSRS*EPCPGAGAQSSAEY Trigger: ATACTCTGCACTGCTCTGAGCACCTGCTCCAGGACAGGGCTCCCAGCTACGGCTCTGATGTCCCTGCCAGAAGCCTCTCTGAGGGCACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS TCA 90 bp | GCGCCAGAACATTCACCCCATTCGCCAGAAAGGCGAGTGCAGGGATaGCTTTGTCCTGGGCGATGCACTGCAGGATCCGGGGTGCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: APEHSPHSPERRVQG*LCPGRCTAGSGVRH Trigger: ATGGCGCACCCCGGATCCTGCAGTGCATCGCCCAGGACAAAGTCATCCCTGCACTCGCCTTTCTGGCGAATGGGGTGAATGTTCTGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122427.8 |
||
| CDS GCA 90 bp | GACAACGGGCGCCAGAACATTCACCCCATTCGCCAGAAAGGCGAGTaGAGGGATGACTTTGTCCTGGGCGATGCACTGCAGGATCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DNGRQNIHPIRQKGE*RDDFVLGDALQDPG Trigger: CCCCGGATCCTGCAGTGCATCGCCCAGGACAAAGTCATCCCTGCACTCGCCTTTCTGGCGAATGGGGTGAATGTTCTGGCGCCCGTTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122427.8 |
||
| CDS-3UTR CAA 90 bp | GCCATGTCAACCTTGGCTGGTGATGGCGCCAAGATGATTTGCTCCTGGGCGGACCAGAGTATCTGGGCCTaGTCTGGGGACGGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AMSTLAGDGAKMICSWADQSIWA*SGDGLR Trigger: CCTGAGCCCGTCCCCAGACAAGGCCCAGATACTCTG...GTCCGCCCAGGAGCAAATCATCTTGGCGCCATCACCAGCCAAGGTTGACATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117134.2 |
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| CDS CCA 90 bp | ACAAAGTCCAGGGTCGAGACAGCCAGCAGGAGCAGCAGCAGCAGCTaGAGGCGGATAATCCACTTGACACCTGCCAGGTTGATGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TKSRVETASRSSSSS*RRIIHLTPARLMPS Trigger: GCTGGGCATCAACCTGGCAGGTGTCAAGTGGATTATCCGCCTCCAGCTGCTGCTGCTGCTCCTGCTGGCTGTCTCGACCCTGGACTTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS TCA 90 bp | TTTTATTTGGCCCTTTCCCATTCGCCAGAAAGGCGAGTGCAGGGATaGCTTTGTCCTGGGCGATGCACTGCAGGATCCGGGGTGCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FYLALSHSPERRVQG*LCPGRCTAGSGVRH Trigger: ATGGCGCACCCCGGATCCTGCAGTGCATCGCCCAGGACAAAGTCATCCCTGCACTCGCCTTTCTGGCGAATGGGAAAGGGCCAAATAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS GCA 90 bp | TACCGGTGTTTTATTTGGCCCTTTCCCATTCGCCAGAAAGGCGAGTaGAGGGATGACTTTGTCCTGGGCGATGCACTGCAGGATCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: YRCFIWPFPIRQKGE*RDDFVLGDALQDPG Trigger: CCCCGGATCCTGCAGTGCATCGCCCAGGACAAAGTCATCCCTGCACTCGCCTTTCTGGCGAATGGGAAAGGGCCAAATAAAACACCGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS CCA 90 bp | CAACGGGCGCCAGAACATTCACCTGACCCACCAGGACAAAGGCCATaGTCACCAAGCTGGTCAGGCAGATGGCTGCTACCGGTGTTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: QRAPEHSPDPPGQRP*SPSWSGRWLLPVFY Trigger: ATAAAACACCGGTAGCAGCCATCTGCCTGACCAGCTTGGTGACCATGGCCTTTGTCCTGGTGGGTCAGGTGAATGTTCTGGCGCCCGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS-3UTR CAA 90 bp | GTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCAGGTCTCCTCCCATGTaGAAGCCAGCCATGACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VEATSKGSEAWVPHLHSGRSPPM*KPAMTP Trigger: AGGAGTCATGGCTGGCTTCAACATGGGAGGAGACCT...GCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CAA 90 bp | CAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAGTGCAGGGATGACTTaGTCCTGGGCGATGCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: QLPKVLRLGSPISTAASRSAGMT*SWAMHC Trigger: GCAGTGCATCGCCCAGGACAAAGTCATCCCTGCACT...TCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS TCA 90 bp | TCTCCAGTTCCTCTATTGGCTGGAGGAACTGATCCATGTCCTTGGTaGACTCCAGCAGGGTGCCCTCAGAGAGGCTTCTGGCAGGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: SPVPLLAGGTDPCPW*TPAGCPQRGFWQGH Trigger: ATGTCCCTGCCAGAAGCCTCTCTGAGGGCACCCTGCTGGAGTTCACCAAGGACATGGATCAGTTCCTCCAGCCAATAGAGGAACTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS TCA 90 bp | ATTGTCCTGGGTAAGCTGAGTCATTGCCATGTCAACCTTGGCTGGTaGTGGCGCCAAGATGATTTGCTCCTGGGCGGACCTCAGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: IVLGKLSHCHVNLGW*WRQDDLLLGGPQAP Trigger: AGGAGCCTGAGGTCCGCCCAGGAGCAAATCATCTTGGCGCCATCACCAGCCAAGGTTGACATGGCAATGACTCAGCTTACCCAGGACAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CAA 90 bp | GTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACATTGACACCTGCCAGGTaGATGCCCAGCAAAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VLVSPDHPGACGLFRLGTLTPAR*MPSKAR Trigger: TCTGGCTTTGCTGGGCATCAACCTGGCAGGTGTCAA...TGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGGTCTCCTCCCATGTaGAAGCCAGCCATGACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KQLPKVLRLGSPISTAASRSPPM*KPAMTP Trigger: AGGAGTCATGGCTGGCTTCAACATGGGAGGAGACCT...AGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS-3UTR CAA 90 bp | AGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGAGGTCTCCTCCCATGTaGAAGCCAGCCATGACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RPECDFQRPRLWWEDQSWRSPPM*KPAMTP Trigger: AGGAGTCATGGCTGGCTTCAACATGGGAGGAGACCT...CCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS CCA 90 bp | GGTCACCAAGCTGGTCAGGCAGATGGCTGCTACCGGTGTTTTATTTaGCCCTTTCCCATTCGCCAGAAAGGCGAGTGCAGGGATGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: GHQAGQADGCYRCFI*PFPIRQKGECRDDF Trigger: AAAGTCATCCCTGCACTCGCCTTTCTGGCGAATGGGAAAGGGCCAAATAAAACACCGGTAGCAGCCATCTGCCTGACCAGCTTGGTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS CCA 90 bp | GAACATTCACCTGACCCACCAGGACAAAGGCCATGGTCACCAAGCTaGTCAGGCAGATGGCTGCTACCGGTGTTTTATTTGGCCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EHSPDPPGQRPWSPS*SGRWLLPVFYLALS Trigger: GGAAAGGGCCAAATAAAACACCGGTAGCAGCCATCTGCCTGACCAGCTTGGTGACCATGGCCTTTGTCCTGGTGGGTCAGGTGAATGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS-3UTR CAA 90 bp | AGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGAGGCGGATAATCCACTaGACACCTGCCAGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RPECDFQRPRLWWEDQSWRRIIH*TPARLM Trigger: CATCAACCTGGCAGGTGTCAAGTGGATTATCCGCCT...CCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS-3UTR CAA 90 bp | CCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCTTCTAGAAAGGTGTACTCTGGCAGAATGTaGCTCTGTAGCAGTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PKVLRLGSPISTAASRKVYSGRM*LCSSSG Trigger: CCCAGAACTGCTACAGAGCAACATTCTGCCAGAGTA...CACCTTTCTAGAAGCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS-3UTR CAA 90 bp | GAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCAGTGCAGGGATGACTTaGTCCTGGGCGATGCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: ECDFQRPRLWWEDQSWVFSAGMT*SWAMHC Trigger: GCAGTGCATCGCCCAGGACAAAGTCATCCCTGCACT...GAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR CAA 90 bp | TGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCAGAGTATCTGGGCCTaGTCTGGGGACGGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WVFLLVEATSKGSEAWVPQSIWA*SGDGLR Trigger: CCTGAGCCCGTCCCCAGACAAGGCCCAGATACTCTG...GGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR CAA 90 bp | TCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACCAGAGTATCTGGGCCTaGTCTGGGGACGGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKAVVGRPVLGFLIGRSNQSIWA*SGDGLR Trigger: CCTGAGCCCGTCCCCAGACAAGGCCCAGATACTCTG...GTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS CCA 90 bp | GAACATTCACCTGACCCACCAGGACAAAGGCCATGGTCACCAAGCTaGTCAGGCAGATGGCTGCTACCGGTGTTTTATTTGGCCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EHSPDPPGQRPWSPS*SGRWLLPVFYLALS Trigger: AGAAAGGGCCAAATAAAACACCGGTAGCAGCCATCTGCCTGACCAGCTTGGTGACCATGGCCTTTGTCCTGGTGGGTCAGGTGAATGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119173.8 |
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| CDS-3UTR CAA 90 bp | GCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAACAGAGTATCTGGGCCTaGTCTGGGGACGGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AVVGRPVLGFLIGRSNFQQSIWA*SGDGLR Trigger: CCTGAGCCCGTCCCCAGACAAGGCCCAGATACTCTG...TTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR CAA 90 bp | AGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGGTAAAGGCCTGGACTaGCCTGGCCAATGTAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RPECDFQRPRLWWEDQSWGKGLD*PGQCRN Trigger: ATTTCTACATTGGCCAGGCAAGTCCAGGCCTTTACC...CCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS TCA 90 bp | TCCTGCAGGAGGGGACCAAGAAGGACTTCATCCATTGGAAAAAGCTaGAGTTTGATGCTGATCCGAGGTAAAGGCCTGGACTTGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SCRRGPRRTSSIGKS*SLMLIRGKGLDLPG Trigger: GCCAGGCAAGTCCAGGCCTTTACCTCGGATCAGCATCAAACTTCAGCTTTTTCCAATGGATGAAGTCCTTCTTGGTCCCCTCCTGCAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS TCA 90 bp | ACCTGCAGGAGGGGACCAAGAAGGACTTCATCCATTGGAAAAAGCTaGAGTTTGATGCTGATCCGAGGTAAAGGCCTGGACTTGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TCRRGPRRTSSIGKS*SLMLIRGKGLDLPG Trigger: GCCAGGCAAGTCCAGGCCTTTACCTCGGATCAGCATCAAACTTCAGCTTTTTCCAATGGATGAAGTCCTTCTTGGTCCCCTCCTGCAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117134.2 |
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| CDS-3UTR CAA 90 bp | TGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCAGTGCAGGGATGACTTaGTCCTGGGCGATGCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: WVFLLVEATSKGSEAWVPSAGMT*SWAMHC Trigger: GCAGTGCATCGCCCAGGACAAAGTCATCCCTGCACT...GGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR CAA 90 bp | GACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTCAGAGTATCTGGGCCTaGTCTGGGGACGGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DQSWVFLLVEATSKGSEAQSIWA*SGDGLR Trigger: CCTGAGCCCGTCCCCAGACAAGGCCCAGATACTCTG...AGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR CAA 90 bp | GTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACACGTGGAACAACGCCAAAAATGTaGATCATGCAGGATGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VSPDHPGACGLFRLGTRGTTPKM*IMQDVN Trigger: GTTCACATCCTGCATGATCAACATTTTTGGCGTTGT...TCCACGTGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 |
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| CDS-3UTR CAA 90 bp | TGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTCAGAGTATCTGGGCCTaGTCTGGGGACGGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WEDQSWVFLLVEATSKGSQSIWA*SGDGLR Trigger: CCTGAGCCCGTCCCCAGACAAGGCCCAGATACTCTG...AGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS CCA 90 bp | AAGGAGACCCAGGGTCCAAGAGGAAGCTATCTTGTAGGGTTTGCTTaGCGCCTTTCTTACCCTTGCGCTTCTGATTCTTTGGGTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KETQGPRGSYLVGFA*RLSYPCASDSLGCF Trigger: GAAACAACCCAAAGAATCAGAAGCGCAAGGGTAAGAAAGGCGCCAAGCAAACCCTACAAGATAGCTTCCTCTTGGACCCTGGGTCTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR CAA 90 bp | TGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCAGGCGGATAATCCACTaGACACCTGCCAGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: WVFLLVEATSKGSEAWVPRRIIH*TPARLM Trigger: CATCAACCTGGCAGGTGTCAAGTGGATTATCCGCCT...GGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS-3UTR CAA 90 bp | TTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTTACTCTGGCAGAATGTaGCTCTGTAGCAGTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FPASKAVVGRPVLGFLIGYSGRM*LCSSSG Trigger: CCCAGAACTGCTACAGAGCAACATTCTGCCAGAGTA...ACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAAGTGCAGGGATGACTTaGTCCTGGGCGATGCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LWWEDQSWVFLLVEATSKSAGMT*SWAMHC Trigger: GCAGTGCATCGCCCAGGACAAAGTCATCCCTGCACT...TTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CAA 90 bp | GTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCCCCCATCTCCACAGCGGCAAGCATAGAAAACACTaGGTCTTCTCTGGATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VEATSKGSEAWVPHLHSGKHRKH*VFSGSL Trigger: AAGAGATCCAGAGAAGACCAAGTGTTTTCTATGCTT...GCCGCTGTGGAGATGGGGGACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CAA 90 bp | AATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTGGTAAAGGCCTGGACTaGCCTGGCCAATGTAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: NVISSVQGCGGKTSLGFSGKGLD*PGQCRN Trigger: ATTTCTACATTGGCCAGGCAAGTCCAGGCCTTTACC...AGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTGGTAAAGGCCTGGACTaGCCTGGCCAATGTAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FPASKAVVGRPVLGFLIGGKGLD*PGQCRN Trigger: ATTTCTACATTGGCCAGGCAAGTCCAGGCCTTTACC...ACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGCGGATAATCCACTaGACACCTGCCAGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: AVVGRPVLGFLIGRSNFQRRIIH*TPARLM Trigger: CATCAACCTGGCAGGTGTCAAGTGGATTATCCGCCT...TTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGAGGTCTCCTCCCATGTaGAAGCCAGCCATGACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QSWVFLLVEATSKGSEAWRSPPM*KPAMTP Trigger: AGGAGTCATGGCTGGCTTCAACATGGGAGGAGACCT...CCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CAA 90 bp | GTCTTGGTGTCACCTGATCATCCTGGTGCCTGTGGACTCTTCAGGTTGGGCACAAAGCATAGAAAACACTaGGTCTTCTCTGGATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLVSPDHPGACGLFRLGTKHRKH*VFSGSL Trigger: AAGAGATCCAGAGAAGACCAAGTGTTTTCTATGCTT...TGTGCCCAACCTGAAGAGTCCACAGGCACCAGGATGATCAGGTGACACCAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
||
| CDS-3UTR CAA 90 bp | AGACCGGAATGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGAAGCATAGAAAACACTaGGTCTTCTCTGGATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RPECDFQRPRLWWEDQSWKHRKH*VFSGSL Trigger: AAGAGATCCAGAGAAGACCAAGTGTTTTCTATGCTT...CCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACATTCCGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CAA 90 bp | TCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCAGGCGGATAATCCACTaGACACCTGCCAGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SWVFLLVEATSKGSEAWVRRIIH*TPARLM Trigger: CATCAACCTGGCAGGTGTCAAGTGGATTATCCGCCT...GACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CAA 90 bp | GTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTACTCTGGCAGAATGTaGCTCTGTAGCAGTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VVGRPVLGFLIGRSNFQRYSGRM*LCSSSG Trigger: CCCAGAACTGCTACAGAGCAACATTCTGCCAGAGTA...CCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS-3UTR CAA 90 bp | GCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAATACTCTGGCAGAATGTaGCTCTGTAGCAGTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AVVGRPVLGFLIGRSNFQYSGRM*LCSSSG Trigger: CCCAGAACTGCTACAGAGCAACATTCTGCCAGAGTA...TTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS-3UTR CAA 90 bp | TGTGATTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTAACAACGCCAAAAATGTaGATCATGCAGGATGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CDFQRPRLWWEDQSWVFLTTPKM*IMQDVN Trigger: GTTCACATCCTGCATGATCAACATTTTTGGCGTTGT...TAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAATCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCAGCGTCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTACAACGCCAAAAATGTaGATCATGCAGGATGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FPASKAVVGRPVLGFLIGTTPKM*IMQDVN Trigger: GTTCACATCCTGCATGATCAACATTTTTGGCGTTGT...ACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGACGCTGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAGGCTGTGGTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACACAACGCCAAAAATGTaGATCATGCAGGATGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SKAVVGRPVLGFLIGRSNTTPKM*IMQDVN Trigger: GTTCACATCCTGCATGATCAACATTTTTGGCGTTGT...GTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCACCACAGCCTTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGGTAAAGGCCTGGACTaGCCTGGCCAATGTAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: WEDQSWVFLLVEATSKGSGKGLD*PGQCRN Trigger: ATTTCTACATTGGCCAGGCAAGTCCAGGCCTTTACC...AGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS-3UTR CAA 90 bp | TCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCTGAGGCTTGGGTCAAGCATAGAAAACACTaGGTCTTCTCTGGATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SWVFLLVEATSKGSEAWVKHRKH*VFSGSL Trigger: AAGAGATCCAGAGAAGACCAAGTGTTTTCTATGCTT...GACCCAAGCCTCAGAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS-3UTR CAA 90 bp | GTGGGAAGACCAGTCTTGGGTTTTCTTATTGGTAGAAGCAACTTCCAAAGGTTCAAGCATAGAAAACACTaGGTCTTCTCTGGATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VGRPVLGFLIGRSNFQRFKHRKH*VFSGSL Trigger: AAGAGATCCAGAGAAGACCAAGTGTTTTCTATGCTT...GAACCTTTGGAAGTTGCTTCTACCAATAAGAAAACCCAAGACTGGTCTTCCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS CCA 72 bp | AGTATCTGGGCCTTGTCTGGGGACGGGCTCAGGAGATaGGGCGAGGCCACAGTGAGCCATGGAGAGGGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: SIWALSGDGLRR*GEATVSHGEGE Trigger: TTCGCCCTCTCCATGGCTCACTGTGGCCTCGCCCCATCTCCTGAGCCCGTCCCCAGACAAGGCCCAGATACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS CAA 72 bp | ACCCCATTCGCCAGAAAGGCGAGTGCAGGGATGACTTaGTCCTGGGCGATGCACTGCAGGATCCGGGGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: TPFARKASAGMT*SWAMHCRIRGA Trigger: CGCACCCCGGATCCTGCAGTGCATCGCCCAGGACAAAGTCATCCCTGCACTCGCCTTTCTGGCGAATGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122427.8 |
||
| CDS TCA 72 bp | GCACCGAGGAGATCATGGAGTAGACACCGCCACTGCTaGTCCCGCCATGCTCTGCGACACCAATGCCCGACA | + |
|
Preference number: 6 (lower is better) Translates to: APRRSWSRHRHC*SRHALRHQCPT Trigger: TGTCGGGCATTGGTGTCGCAGAGCATGGCGGGATCAGCAGTGGCGGTGTCTACTCCATGATCTCCTCGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS TCA 72 bp | GCCCTTTCCCATTCGCCAGAAAGGCGAGTGCAGGGATaGCTTTGTCCTGGGCGATGCACTGCAGGATCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: ALSHSPERRVQG*LCPGRCTAGSG Trigger: CCCGGATCCTGCAGTGCATCGCCCAGGACAAAGTCATCCCTGCACTCGCCTTTCTGGCGAATGGGAAAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS CCA 72 bp | AGGGTCGAGACAGCCAGCAGGAGCAGCAGCAGCAGCTaGAGGCGGATAATCCACTTGACACCTGCCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RVETASRSSSSS*RRIIHLTPARL Trigger: CAACCTGGCAGGTGTCAAGTGGATTATCCGCCTCCAGCTGCTGCTGCTGCTCCTGCTGGCTGTCTCGACCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS CAA 72 bp | TTCCCATTCGCCAGAAAGGCGAGTGCAGGGATGACTTaGTCCTGGGCGATGCACTGCAGGATCCGGGGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: FPFARKASAGMT*SWAMHCRIRGA Trigger: CGCACCCCGGATCCTGCAGTGCATCGCCCAGGACAAAGTCATCCCTGCACTCGCCTTTCTGGCGAATGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS TCA 72 bp | TTGCCATGTCAACCTTGGCTGGTGATGGCGCCAAGATaGTTTGCTCCTGGGCGGACCTCAGGCTCCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LPCQPWLVMAPR*FAPGRTSGSCR Trigger: CCTGCAGGAGCCTGAGGTCCGCCCAGGAGCAAATCATCTTGGCGCCATCACCAGCCAAGGTTGACATGGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS TCA 72 bp | CATTCACCCCATTCGCCAGAAAGGCGAGTGCAGGGATaGCTTTGTCCTGGGCGATGCACTGCAGGATCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: HSPHSPERRVQG*LCPGRCTAGSG Trigger: CCCGGATCCTGCAGTGCATCGCCCAGGACAAAGTCATCCCTGCACTCGCCTTTCTGGCGAATGGGGTGAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122427.8 |
||
| CDS CAA 90 bp | ACAGCCAGCAGGAGCAGCAGCAGCAGCTGGAGGCGGATAATCCACTaGACACCTGCCAGGTTGATGCCCAGCAAAGCCAGAAGCACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TASRSSSSSWRRIIH*TPARLMPSKARSTA Trigger: TGCTGTGCTTCTGGCTTTGCTGGGCATCAACCTGGCAGGTGTCAAGTGGATTATCCGCCTCCAGCTGCTGCTGCTGCTCCTGCTGGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS GCA 72 bp | CAGCAGCAGCTGGAGGCGGATAATCCACTTGACACCTaGCAGGTTGATGCCCAGCAAAGCCAGAAGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: QQQLEADNPLDT*QVDAQQSQKHS Trigger: GCTGTGCTTCTGGCTTTGCTGGGCATCAACCTGGCAGGTGTCAAGTGGATTATCCGCCTCCAGCTGCTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS GCA 72 bp | CATCCCTCCTTGTACCAGCCCCAGTGGGCACAGACCTaGAGGAGGGGACCAAGAAGGACTTCATCCATTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HPSLYQPQWAQT*RRGPRRTSSIG Trigger: TCCAATGGATGAAGTCCTTCTTGGTCCCCTCCTGCAGGTCTGTGCCCACTGGGGCTGGTACAAGGAGGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117134.2 |
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| CDS CAA 72 bp | AGGAGCAGCAGCAGCAGCTGGAGGCGGATAATCCACTaGACACCTGCCAGGTTGATGCCCAGCAAAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSSSSSWRRIIH*TPARLMPSKAR Trigger: TCTGGCTTTGCTGGGCATCAACCTGGCAGGTGTCAAGTGGATTATCCGCCTCCAGCTGCTGCTGCTGCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS TCA 72 bp | ACGCACTGCCCAGATGTCCCCAAGTCCCAGCAGATCTaGGATGGACTCCGCAAAGCCGGTGATGTACATAGC | + |
|
Preference number: 6 (lower is better) Translates to: THCPDVPKSQQI*DGLRKAGDVHS Trigger: GCTATGTACATCACCGGCTTTGCGGAGTCCATCTCAGATCTGCTGGGACTTGGGGACATCTGGGCAGTGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS TCA 72 bp | CCTCTATTGGCTGGAGGAACTGATCCATGTCCTTGGTaGACTCCAGCAGGGTGCCCTCAGAGAGGCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PLLAGGTDPCPW*TPAGCPQRGFW Trigger: CCAGAAGCCTCTCTGAGGGCACCCTGCTGGAGTTCACCAAGGACATGGATCAGTTCCTCCAGCCAATAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS CAA 90 bp | AGCAGCAGCAGCTGGAGGCGGATAATCCACTTGACACCTGCCAGGTaGATGCCCAGCAAAGCCAGAAGCACAGCAACTGAAATTCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSWRRIIHLTPAR*MPSKARSTATEIPR Trigger: GCGTGGAATTTCAGTTGCTGTGCTTCTGGCTTTGCTGGGCATCAACCTGGCAGGTGTCAAGTGGATTATCCGCCTCCAGCTGCTGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS TCA 72 bp | GGTAAGCTGAGTCATTGCCATGTCAACCTTGGCTGGTaGTGGCGCCAAGATGATTTGCTCCTGGGCGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: GKLSHCHVNLGW*WRQDDLLLGGP Trigger: AGGTCCGCCCAGGAGCAAATCATCTTGGCGCCATCACCAGCCAAGGTTGACATGGCAATGACTCAGCTTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS CCA 72 bp | CCTGACCCACCAGGACAAAGGCCATGGTCACCAAGCTaGTCAGGCAGATGGCTGCTACCGGTGTTTTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: PDPPGQRPWSPS*SGRWLLPVFYL Trigger: CAAATAAAACACCGGTAGCAGCCATCTGCCTGACCAGCTTGGTGACCATGGCCTTTGTCCTGGTGGGTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS CAA 72 bp | AGCTGGTCAGGCAGATGGCTGCTACCGGTGTTTTATTaGGCCCTTTCCCATTCGCCAGAAAGGCGAGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SWSGRWLLPVFY*ALSHSPERRVQ Trigger: CTGCACTCGCCTTTCTGGCGAATGGGAAAGGGCCAAATAAAACACCGGTAGCAGCCATCTGCCTGACCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS TCA 72 bp | CTCGGGTACAGACGGCACCAAGCAGGAAGGCAAAGATaGTGTAGAGAAACCACGAGACGCCAACAGCTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: LGYRRHQAGRQR*CRETTRRQQLL Trigger: TAGCAGCTGTTGGCGTCTCGTGGTTTCTCTACATCATCTTTGCCTTCCTGCTTGGTGCCGTCTGTACCCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS TCA 72 bp | AAATTGATGGTGACAACGGGCGCCAGAACATTCACCTaGCCCACCAGGACAAAGGCCATGGTCACCAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KLMVTTGARTFT*PTRTKAMVTKL Trigger: CAGCTTGGTGACCATGGCCTTTGTCCTGGTGGGTCAGGTGAATGTTCTGGCGCCCGTTGTCACCATCAATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS GCA 72 bp | AAAGGCCATGGTCACCAAGCTGGTCAGGCAGATGGCTaGTACCGGTGTTTTATTTGGCCCTTTCCCATTCGC | + |
|
Preference number: 6 (lower is better) Translates to: KGHGHQAGQADG*YRCFIWPFPIR Trigger: GCGAATGGGAAAGGGCCAAATAAAACACCGGTAGCAGCCATCTGCCTGACCAGCTTGGTGACCATGGCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000121925.8 ENSMUST00000122314.8 |
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| CDS CAA 72 bp | AGCTGGAGGCGGATAATCCACTTGACACCTGCCAGGTaGATGCCCAGCAAAGCCAGAAGCACAGCAACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SWRRIIHLTPAR*MPSKARSTATE Trigger: TTCAGTTGCTGTGCTTCTGGCTTTGCTGGGCATCAACCTGGCAGGTGTCAAGTGGATTATCCGCCTCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS CAA 90 bp | CCCACCAGCCAGCCGGTCCTCAAGAAAAGGACAACGCCAAAAATGTaGATCATGCAGGATGTGAACACACCATCCCAGGTCCCAAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: PTSQPVLKKRTTPKM*IMQDVNTPSQVPNS Trigger: GCTGTTTGGGACCTGGGATGGTGTGTTCACATCCTGCATGATCAACATTTTTGGCGTTGTCCTTTTCTTGAGGACCGGCTGGCTGGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS CAA 90 bp | GTAGGGTTTGCTTGGCGCCTTTCTTACCCTTGCGCTTCTGATTCTTaGGGTTGTTTCCTTCTCTTGACCCAAGCTGACGACTCTCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: VGFAWRLSYPCASDS*GCFLLLTQADDSPV Trigger: AACTGGAGAGTCGTCAGCTTGGGTCAAGAGAAGGAAACAACCCAAAGAATCAGAAGCGCAAGGGTAAGAAAGGCGCCAAGCAAACCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS CCA 72 bp | CAGGGTCCAAGAGGAAGCTATCTTGTAGGGTTTGCTTaGCGCCTTTCTTACCCTTGCGCTTCTGATTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QGPRGSYLVGFA*RLSYPCASDSL Trigger: CAAAGAATCAGAAGCGCAAGGGTAAGAAAGGCGCCAAGCAAACCCTACAAGATAGCTTCCTCTTGGACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS CAA 72 bp | CAGCCGGTCCTCAAGAAAAGGACAACGCCAAAAATGTaGATCATGCAGGATGTGAACACACCATCCCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: QPVLKKRTTPKM*IMQDVNTPSQV Trigger: GACCTGGGATGGTGTGTTCACATCCTGCATGATCAACATTTTTGGCGTTGTCCTTTTCTTGAGGACCGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059056.15 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122427.8 |
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| CDS CAA 72 bp | AGCTGGTCAGGCAGATGGCTGCTACCGGTGTTTTATTaGGCCCTTTCTTTTCAGCTATCAGGAAGTCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SWSGRWLLPVFY*ALSFQLSGSQS Trigger: GCTCTGACTTCCTGATAGCTGAAAAGAAAGGGCCAAATAAAACACCGGTAGCAGCCATCTGCCTGACCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119173.8 |
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| CDS CAA 90 bp | CTTTCTTACCCTTGCGCTTCTGATTCTTTGGGTTGTTTCCTTCTCTaGACCCAAGCTGACGACTCTCCAGTTCCTCTATTGGCTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSYPCASDSLGCFLL*TQADDSPVPLLAGG Trigger: TCCTCCAGCCAATAGAGGAACTGGAGAGTCGTCAGCTTGGGTCAAGAGAAGGAAACAACCCAAAGAATCAGAAGCGCAAGGGTAAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS TCA 72 bp | CTTGCGCTTCTGATTCTTTGGGTTGTTTCCTTCTCTTaGCCCAAGCTGACGACTCTCCAGTTCCTCTATTGG | + |
|
Preference number: 6 (lower is better) Translates to: LALLILWVVSFS*PKLTTLQFLYW Trigger: CCAATAGAGGAACTGGAGAGTCGTCAGCTTGGGTCAAGAGAAGGAAACAACCCAAAGAATCAGAAGCGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS CAA 72 bp | CCTTGCGCTTCTGATTCTTTGGGTTGTTTCCTTCTCTaGACCCAAGCTGACGACTCTCCAGTTCCTCTATTG | + |
|
Preference number: 6 (lower is better) Translates to: PCASDSLGCFLL*TQADDSPVPLL Trigger: CAATAGAGGAACTGGAGAGTCGTCAGCTTGGGTCAAGAGAAGGAAACAACCCAAAGAATCAGAAGCGCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS CAA 90 bp | AGTCTGCATTTCAGAAAGAAATCTTCTCTGTTCACTCTAGGCTGGTaGCGTAGATCAGGAACAAGATGGTCATGTGATTCACTCCTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLHFRKKSSLFTLGW*RRSGTRWSCDSLLE Trigger: TTCTAGGAGTGAATCACATGACCATCTTGTTCCTGATCTACGCAACCAGCCTAGAGTGAACAGAGAAGATTTCTTTCTGAAATGCAGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS CCA 72 bp | CATTTCAGAAAGAAATCTTCTCTGTTCACTCTAGGCTaGTTGCGTAGATCAGGAACAAGATGGTCATGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: HFRKKSSLFTLG*LRRSGTRWSCD Trigger: ATCACATGACCATCTTGTTCCTGATCTACGCAACCAGCCTAGAGTGAACAGAGAAGATTTCTTTCTGAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS CAA 72 bp | TTCAGAAAGAAATCTTCTCTGTTCACTCTAGGCTGGTaGCGTAGATCAGGAACAAGATGGTCATGTGATTCA | + |
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Preference number: 6 (lower is better) Translates to: FRKKSSLFTLGW*RRSGTRWSCDS Trigger: TGAATCACATGACCATCTTGTTCCTGATCTACGCAACCAGCCTAGAGTGAACAGAGAAGATTTCTTTCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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| CDS CAA 90 bp | GTTACACATGCAAGCATAGAAAACACTTGGTCTTCTCTGGATCTCTaGTTCCTGAAGTCTGCATTTCAGAAAGAAATCTTCTCTGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: VTHASIENTWSSLDL*FLKSAFQKEIFSVH Trigger: GTGAACAGAGAAGATTTCTTTCTGAAATGCAGACTTCAGGAACAAGAGATCCAGAGAAGACCAAGTGTTTTCTATGCTTGCATGTGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059056.15 ENSMUST00000117134.2 ENSMUST00000119173.8 ENSMUST00000121925.8 ENSMUST00000122314.8 ENSMUST00000122427.8 |
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