RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC12A5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000017740

Ensembl transcript IDs: ENSMUST00000099092.8, ENSMUST00000125867.2, ENSMUST00000202136.2, ENSMUST00000202223.4, ENSMUST00000202479.4, ENSMUST00000202623.4

Found 330 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTTATGTAAACGGTGACAGCGGCGGGGAGGCGCGGCGAGGGCTCTaGGGGCCGCGGGCCGGGCGCGCTCGGGCCGGAGTGGCAGGTCCT +
Preference number: 1 (lower is better)
Translates to: SYVNGDSGGEARRGL*GPRAGRARAGVAGP
Trigger: AGGACCTGCCACTCCGGCCCGAGCGCGCCCGGCCCGCGGCCCCCAGAGCCCTCGCCGCGCCTCCCCGCCGCTGTCACCGTTTACATAAGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
3UTR CCA 90 bp AGCTCGGGAGCGCAGGGAAACCTGGCTCCCCGGCTTCCGCCTTCCTaGGTGCCCGCAGCGGGGAGAGCGCGGCCGTGGCGAGGAGTCCGT +
Preference number: 1 (lower is better)
Translates to: SSGAQGNLAPRLPPS*VPAAGRARPWRGVR
Trigger: ACGGACTCCTCGCCACGGCCGCGCTCTCCCCGCTGCGGGCACCCAGGAAGGCGGAAGCCGGGGAGCCAGGTTTCCCTGCGCTCCCGAGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR GCA 90 bp ACGGGACAGGGGGAGCAGGCGGCAAGCCAAGAGAGGAGAGACGCCTaGTCCTCCACGAAGGCACCGGGCAGGACTTCCTCGGTGGGCACG +
Preference number: 1 (lower is better)
Translates to: TGQGEQAASQERRDA*SSTKAPGRTSSVGT
Trigger: CGTGCCCACCGAGGAAGTCCTGCCCGGTGCCTTCGTGGAGGAGCAGGCGTCTCTCCTCTCTTGGCTTGCCGCCTGCTCCCCCTGTCCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR GCA 90 bp GGGACCACGGTTCCGCTCCTCTCCACGCCTCCTCGCCACCTTTATTaGAACGTCTGCTCCGGCGGGGCGAGGCCAGGCTCAGAAAAGGGG +
Preference number: 1 (lower is better)
Translates to: GTTVPLLSTPPRHLY*NVCSGGARPGSEKG
Trigger: CCCCTTTTCTGAGCCTGGCCTCGCCCCGCCGGAGCAGACGTTGCAATAAAGGTGGCGAGGAGGCGTGGAGAGGAGCGGAACCGTGGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 90 bp GGAAACTGGGGAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTTaGCGAGGAGCCACGGGACAGGGGGAGCAGGCGGCAAGCCAAGAG +
Preference number: 1 (lower is better)
Translates to: GNWGGCALQLHEFSL*RGATGQGEQAASQE
Trigger: CTCTTGGCTTGCCGCCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTCCCCAGTTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR GCA 90 bp GGCTGGAGGCACTGTACCCAGTCCCAGAGGGCGCTTAAAGGAGCATaGAGTGCCTGTCCTCTTAGTAACGTGCCCTGGGGCAAGGGAACC +
Preference number: 1 (lower is better)
Translates to: GWRHCTQSQRALKGA*SACPLSNVPWGKGT
Trigger: GGTTCCCTTGCCCCAGGGCACGTTACTAAGAGGACAGGCACTGCATGCTCCTTTAAGCGCCCTCTGGGACTGGGTACAGTGCCTCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR GCA 90 bp CCAGCCCTGCCACTGGCCACACCTGAGCCGTTTGATGGCACCAGCTaGAGTTCTCTCTGCCTTGGGCTCAAGGAAAAAGAGGTGGTGAGG +
Preference number: 1 (lower is better)
Translates to: PALPLATPEPFDGTS*SSLCLGLKEKEVVR
Trigger: CCTCACCACCTCTTTTTCCTTGAGCCCAAGGCAGAGAGAACTGCAGCTGGTGCCATCAAACGGCTCAGGTGTGGCCAGTGGCAGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 90 bp GGGCACCCACACACACACACACACACACACACACACACACACAGGTaGGGCTGGTGGAGCGGAAGCGCCAAGGATGAGTTTGGGAAAGCC +
Preference number: 1 (lower is better)
Translates to: GHPHTHTHTHTHTHR*GWWSGSAKDEFGKA
Trigger: GGCTTTCCCAAACTCATCCTTGGCGCTTCCGCTCCACCAGCCCCACCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR GCA 90 bp AGAGGGCGCTTAAAGGAGCATGCAGTGCCTGTCCTCTTAGTAACGTaGCCTGGGGCAAGGGAACCAGCCAAACGCCTCTCTAAGGGGCTA +
Preference number: 1 (lower is better)
Translates to: RGRLKEHAVPVLLVT*PGAREPAKRLSKGL
Trigger: TAGCCCCTTAGAGAGGCGTTTGGCTGGTTCCCTTGCCCCAGGGCACGTTACTAAGAGGACAGGCACTGCATGCTCCTTTAAGCGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 90 bp CCACACACACACACACACACACACACACACACACACAGGTGGGGCTaGTGGAGCGGAAGCGCCAAGGATGAGTTTGGGAAAGCCAAAGGC +
Preference number: 1 (lower is better)
Translates to: PHTHTHTHTHTHRWG*WSGSAKDEFGKAKG
Trigger: GCCTTTGGCTTTCCCAAACTCATCCTTGGCGCTTCCGCTCCACCAGCCCCACCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 90 bp CACACACACACACACACACACACACACACACACAGGTGGGGCTGGTaGAGCGGAAGCGCCAAGGATGAGTTTGGGAAAGCCAAAGGCCTT +
Preference number: 1 (lower is better)
Translates to: HTHTHTHTHTHRWGW*SGSAKDEFGKAKGL
Trigger: AAGGCCTTTGGCTTTCCCAAACTCATCCTTGGCGCTTCCGCTCCACCAGCCCCACCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 90 bp ATGGTGGGCCCTAGGTCCTACACTTCCAACTTGATGGCTACTGCCTaGAAGAATGCCCAGTCCTCATCAAGCCTTGAGAGGGGCTTGAGC +
Preference number: 1 (lower is better)
Translates to: MVGPRSYTSNLMATA*KNAQSSSSLERGLS
Trigger: GCTCAAGCCCCTCTCAAGGCTTGATGAGGACTGGGCATTCTTCCAGGCAGTAGCCATCAAGTTGGAAGTGTAGGACCTAGGGCCCACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 90 bp ACTTTGCTCTTGCCAACCAGAGTCTGGGCCCAGGTCATGCAACTTTaGTTCCCTAATTGGTGTCGATGCTGCCTCCTCCCCAGCTACCCA +
Preference number: 1 (lower is better)
Translates to: TLLLPTRVWAQVMQL*FPNWCRCCLLPSYP
Trigger: TGGGTAGCTGGGGAGGAGGCAGCATCGACACCAATTAGGGAACCAAAGTTGCATGACCTGGGCCCAGACTCTGGTTGGCAAGAGCAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 90 bp GGGCTGTTTTCATCAACGGAAACTTTGCTCTTGCCAACCAGAGTCTaGGCCCAGGTCATGCAACTTTGGTTCCCTAATTGGTGTCGATGC +
Preference number: 1 (lower is better)
Translates to: GLFSSTETLLLPTRV*AQVMQLWFPNWCRC
Trigger: GCATCGACACCAATTAGGGAACCAAAGTTGCATGACCTGGGCCCAGACTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAAACAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR GCA 90 bp GCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTaGCCTGCACATAGGTCTGCTGAAACAGAAGCGACACTCTTCTCA +
Preference number: 1 (lower is better)
Translates to: ACNLSYLQGFWTALH*PAHRSAETEATLFS
Trigger: TGAGAAGAGTGTCGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
3UTR TCA 90 bp AGGTCTGCTGAAACAGAAGCGACACTCTTCTCACTACCAGGCTACTaGAATATTGCACTCAGAGTAGAAGTCACCTGGATGGACATGGAA +
Preference number: 1 (lower is better)
Translates to: RSAETEATLFSLPGY*NIALRVEVTWMDME
Trigger: TTCCATGTCCATCCAGGTGACTTCTACTCTGAGTGCAATATTTCAGTAGCCTGGTAGTGAGAAGAGTGTCGCTTCTGTTTCAGCAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR GCA 90 bp ATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTaGATTGCCCTGCACATAGGTCTGCTGAAACAGAAGCGACACTCT +
Preference number: 1 (lower is better)
Translates to: IWLATSPIYKGFGLH*IALHIGLLKQKRHS
Trigger: AGAGTGTCGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
3UTR CCA 90 bp AATACTCTTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTaGACTGCATTGCATTGCCCTGCACATAGGTCTGCTGAAACAGAA +
Preference number: 1 (lower is better)
Translates to: NTLDLACNLSYLQGF*TALHCPAHRSAETE
Trigger: TTCTGTTTCAGCAGACCTATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAAGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
3UTR CAA 90 bp CCGCCTGGAAGCTCGCATCCACCGAAGCCGGCCACCGTCTCACCTTaGTCCGCCAAGAACTGGAGGGAGGAGAGGGTAGCCCAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: PPGSSHPPKPATVSP*SAKNWREERVAQAV
Trigger: CACAGCCTGGGCTACCCTCTCCTCCCTCCAGTTCTTGGCGGACAAAGGTGAGACGGTGGCCGGCTTCGGTGGATGCGAGCTTCCAGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR-3UTR GCA 90 bp CAGGGCCCTGGGGCTGGAGGCACTGTACCCAGTCCCAGAGGGCGCTTAAAGGAGGCAAGGCCTCAGGGCTaGAGGCAGCGGGAAGGAAAG +
Preference number: 2 (lower is better)
Translates to: QGPGAGGTVPSPRGRLKEARPQG*RQREGK
Trigger: CTTTCCTTCCCGCTGCCTGCAGCCCTGAGGCCTTGC...CTCCTTTAAGCGCCCTCTGGGACTGGGTACAGTGCCTCCAGCCCCAGGGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR-3UTR GCA 90 bp GCTCCACGAATTCAGTCTTTGGCGAGGAGCCACGGGACAGGGGGAGCAGGCGGCGAGAGGAGAGACGCCTaGTCCTCCACGAAGGCACCG +
Preference number: 2 (lower is better)
Translates to: APRIQSLARSHGTGGAGGERRDA*SSTKAP
Trigger: CGGTGCCTTCGTGGAGGAGCAGGCGTCTCTCCTCTC...GCCGCCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CAA 90 bp GGCTGTGGACAGGAAAGGGAAAGGAGAGCGCCGGCCTTAAAGCACTaGGCTCTCAGCTCGGGAGCGCAGGGAAACCTGGCTCCCCGGCTT +
Preference number: 2 (lower is better)
Translates to: GCGQERERRAPALKH*ALSSGAQGNLAPRL
Trigger: AAGCCGGGGAGCCAGGTTTCCCTGCGCTCCCGAGCTGAGAGCCAAGTGCTTTAAGGCCGGCGCTCTCCTTTCCCTTTCCTGTCCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CAA 90 bp AGGAAACTGGGGAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTaGGCGAGGAGCCACGGGACAGGGGGAGCAGGCGGCAAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: RKLGRVCPPAPRIQS*ARSHGTGGAGGKPR
Trigger: TCTTGGCTTGCCGCCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTCCCCAGTTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR-3UTR TCA 90 bp TCCAGCTCCACGAATTCAGTCTTTGGCGAGGAGCCACGGGACAGGGGGAGCAGGGTCTTATGTAAACGGTaGCAGCGGCGGGGAGGCGCG +
Preference number: 2 (lower is better)
Translates to: SSSTNSVFGEEPRDRGSRVLCKR*QRRGGA
Trigger: CGCGCCTCCCCGCCGCTGTCACCGTTTACATAAGAC...CCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR-3UTR TCA 90 bp GCCACCTTTATTGCAACGTCTGCTCCGGCGGGGCGAGGCCAGGCTCAGAAAAGGGTCTTATGTAAACGGTaGCAGCGGCGGGGAGGCGCG +
Preference number: 2 (lower is better)
Translates to: ATFIATSAPAGRGQAQKRVLCKR*QRRGGA
Trigger: CGCGCCTCCCCGCCGCTGTCACCGTTTACATAAGAC...CCTTTTCTGAGCCTGGCCTCGCCCCGCCGGAGCAGACGTTGCAATAAAGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR-3UTR GCA 90 bp GCCTGCTCCTCCACGAAGGCACCGGGCAGGACTTCCTCGGTGGGCACGGGCCTCTGGCGAGGAGTCCGTTaGGTTTCTAGTTACAGAAAT +
Preference number: 2 (lower is better)
Translates to: ACSSTKAPGRTSSVGTGLWRGVR*VSSYRN
Trigger: ATTTCTGTAACTAGAAACGCAACGGACTCCTCGCCA...GAGGCCCGTGCCCACCGAGGAAGTCCTGCCCGGTGCCTTCGTGGAGGAGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR-3UTR CCA 90 bp GAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTTGGCGAGGAGCCACGGGACTTGTCCGCCAAGAACTaGAGGGAGGAGAGGGTAGCC +
Preference number: 2 (lower is better)
Translates to: EGVPSSSTNSVFGEEPRDLSAKN*REERVA
Trigger: GGCTACCCTCTCCTCCCTCCAGTTCTTGGCGGACAA...GTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR-3UTR CCA 90 bp CACACAGGTGGGGCTGGTGGAGCGGAAGCGCCAAGGATGAGTTTGGGAAAGCCATTGTCCGCCAAGAACTaGAGGGAGGAGAGGGTAGCC +
Preference number: 2 (lower is better)
Translates to: HTGGAGGAEAPRMSLGKPLSAKN*REERVA
Trigger: GGCTACCCTCTCCTCCCTCCAGTTCTTGGCGGACAA...TGGCTTTCCCAAACTCATCCTTGGCGCTTCCGCTCCACCAGCCCCACCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR-3UTR GCA 90 bp CATGCCCAGGAAGGAGAGAGTCCAGTGGTAATAGCGAAATCGTGGCCTCCAGTTGTCCTCAGCAGCGTCTaGACCGCACAAGCCAAGTTC +
Preference number: 2 (lower is better)
Translates to: HAQEGESPVVIAKSWPPVVLSSV*TAQAKF
Trigger: GAACTTGGCTTGTGCGGTGCAGACGCTGCTGAGGAC...AACTGGAGGCCACGATTTCGCTATTACCACTGGACTCTCTCCTTCCTGGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202136.2
3UTR-3UTR GCA 90 bp CACACAGGTGGGGCTGGTGGAGCGGAAGCGCCAAGGATGAGTTTGGGAAAGCCATGGCGAGGAGTCCGTTaGGTTTCTAGTTACAGAAAT +
Preference number: 2 (lower is better)
Translates to: HTGGAGGAEAPRMSLGKPWRGVR*VSSYRN
Trigger: ATTTCTGTAACTAGAAACGCAACGGACTCCTCGCCA...TGGCTTTCCCAAACTCATCCTTGGCGCTTCCGCTCCACCAGCCCCACCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CAA 90 bp ACACACACAGGTGGGGCTGGTGGAGCGGAAGCGCCAAGGATGAGTTaGGGAAAGCCAAAGGCCTTGAGTTCTACTCAGAAAAAGGTCAGA +
Preference number: 2 (lower is better)
Translates to: THTGGAGGAEAPRMS*GKPKALSSTQKKVR
Trigger: TCTGACCTTTTTCTGAGTAGAACTCAAGGCCTTTGGCTTTCCCAAACTCATCCTTGGCGCTTCCGCTCCACCAGCCCCACCTGTGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR-3UTR TCA 90 bp AATGCCCAGTCCTCATCAAGCCTTGAGAGGGGCTTGAGCCAAGCAACAGGGCAGGAAAGCCAAAGGCCTTaGGTTCTACTCAGAAAAAGG +
Preference number: 2 (lower is better)
Translates to: NAQSSSSLERGLSQATGQESQRP*VLLRKR
Trigger: CCTTTTTCTGAGTAGAACTCAAGGCCTTTGGCTTTC...CTGCCCTGTTGCTTGGCTCAAGCCCCTCTCAAGGCTTGATGAGGACTGGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR-3UTR CCA 90 bp TGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACATTCCCAGGAAGGAAACTaGGGAGGGTGTGCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: CNLSYLQGFWTALHCPAHSQEGN*GGCALQ
Trigger: CTGGAGGGCACACCCTCCCCAGTTTCCTTCCTGGGA...ATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CAA 90 bp GGTGGAGCGGAAGCGCCAAGGATGAGTTTGGGAAAGCCAAAGGCCTaGAGTTCTACTCAGAAAAAGGTCAGAGAAGCGCTAGGAACAACT +
Preference number: 2 (lower is better)
Translates to: GGAEAPRMSLGKPKA*SSTQKKVREALGTT
Trigger: AGTTGTTCCTAGCGCTTCTCTGACCTTTTTCTGAGTAGAACTCAAGGCCTTTGGCTTTCCCAAACTCATCCTTGGCGCTTCCGCTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR-3UTR GCA 90 bp TGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACACAAACTGGGGAGGGTGTaGCCTCCAGCTCCACGAATT +
Preference number: 2 (lower is better)
Translates to: WHKEHKINTESGCEIPKHKLGRV*PPAPRI
Trigger: AATTCGTGGAGCTGGAGGGCACACCCTCCCCAGTTT...GTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CAA 90 bp GATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATaGCATTGCCCTGCACATAGGTCTGCTGAAACAGAAGCGACACTC +
Preference number: 2 (lower is better)
Translates to: DLACNLSYLQGFWTA*HCPAHRSAETEATL
Trigger: GAGTGTCGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
3UTR-3UTR GCA 90 bp AGCTACAGTGATTATAGAGGTGACTTGAACGACACAAGGTTCATAACAAATATTGCAAGGCCTCAGGGCTaGAGGCAGCGGGAAGGAAAG +
Preference number: 2 (lower is better)
Translates to: SYSDYRGDLNDTRFITNIARPQG*RQREGK
Trigger: CTTTCCTTCCCGCTGCCTGCAGCCCTGAGGCCTTGC...AATATTTGTTATGAACCTTGTGTCGTTCAAGTCACCTCTATAATCACTGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR-3UTR CCA 90 bp AGCTACAGTGATTATAGAGGTGACTTGAACGACACAAGGTTCATAACAAATATTACACACACACACAGGTaGGGCTGGTGGAGCGGAAGC +
Preference number: 2 (lower is better)
Translates to: SYSDYRGDLNDTRFITNITHTHR*GWWSGS
Trigger: GCTTCCGCTCCACCAGCCCCACCTGTGTGTGTGTGT...AATATTTGTTATGAACCTTGTGTCGTTCAAGTCACCTCTATAATCACTGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CAA 90 bp CTGGATGGACATGGAACATCTAGCTACAGTGATTATAGAGGTGACTaGAACGACACAAGGTTCATAACAAATATTGCACATGGAGCACAG +
Preference number: 2 (lower is better)
Translates to: LDGHGTSSYSDYRGD*NDTRFITNIAHGAQ
Trigger: CTGTGCTCCATGTGCAATATTTGTTATGAACCTTGTGTCGTTCAAGTCACCTCTATAATCACTGTAGCTAGATGTTCCATGTCCATCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR-3UTR GCA 90 bp TGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACACACTCTTGATTTGGCTTaGAACCTCTCCTATTTACAA +
Preference number: 2 (lower is better)
Translates to: WHKEHKINTESGCEIPKHTLDLA*NLSYLQ
Trigger: TTGTAAATAGGAGAGGTTGCAAGCCAAATCAAGAGT...GTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
3UTR-3UTR CCA 90 bp AGCTACAGTGATTATAGAGGTGACTTGAACGACACAAGGTTCATAACAAATATTAAAGGGGCCAGGGCATaGGCAACTGGGTCTTATGTA +
Preference number: 2 (lower is better)
Translates to: SYSDYRGDLNDTRFITNIKGARA*ATGSYV
Trigger: TACATAAGACCCAGTTGCCCATGCCCTGGCCCCTTT...AATATTTGTTATGAACCTTGTGTCGTTCAAGTCACCTCTATAATCACTGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR TCA 72 bp GGCCAGGGCATGGGCAACTGGGTCTTATGTAAACGGTaGCAGCGGCGGGGAGGCGCGGCGAGGGCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: GQGMGNWVLCKR*QRRGGAARALG
Trigger: CCCCAGAGCCCTCGCCGCGCCTCCCCGCCGCTGTCACCGTTTACATAAGACCCAGTTGCCCATGCCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 72 bp AGCACTTGGCTCTCAGCTCGGGAGCGCAGGGAAACCTaGCTCCCCGGCTTCCGCCTTCCTGGGTGCCCGCAG +
Preference number: 3 (lower is better)
Translates to: STWLSARERRET*LPGFRLPGCPQ
Trigger: CTGCGGGCACCCAGGAAGGCGGAAGCCGGGGAGCCAGGTTTCCCTGCGCTCCCGAGCTGAGAGCCAAGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR GCA 72 bp GGGGAGCAGGCGGCAAGCCAAGAGAGGAGAGACGCCTaGTCCTCCACGAAGGCACCGGGCAGGACTTCCTCG +
Preference number: 3 (lower is better)
Translates to: GEQAASQERRDA*SSTKAPGRTSS
Trigger: CGAGGAAGTCCTGCCCGGTGCCTTCGTGGAGGAGCAGGCGTCTCTCCTCTCTTGGCTTGCCGCCTGCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR GCA 72 bp GTTCCGCTCCTCTCCACGCCTCCTCGCCACCTTTATTaGAACGTCTGCTCCGGCGGGGCGAGGCCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: VPLLSTPPRHLY*NVCSGGARPGS
Trigger: TGAGCCTGGCCTCGCCCCGCCGGAGCAGACGTTGCAATAAAGGTGGCGAGGAGGCGTGGAGAGGAGCGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 72 bp GGAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTTaGCGAGGAGCCACGGGACAGGGGGAGCAGGCGGCA +
Preference number: 3 (lower is better)
Translates to: GGCALQLHEFSL*RGATGQGEQAA
Trigger: TGCCGCCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR GCA 72 bp CTCTCCACGCCTCCTCGCCACCTTTATTGCAACGTCTaGTCCGGCGGGGCGAGGCCAGGCTCAGAAAAGGGG +
Preference number: 3 (lower is better)
Translates to: LSTPPRHLYCNV*SGGARPGSEKG
Trigger: CCCCTTTTCTGAGCCTGGCCTCGCCCCGCCGGAGCAGACGTTGCAATAAAGGTGGCGAGGAGGCGTGGAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR TCA 72 bp GCTGTGCGAGGCCTCCTGGTGAGTCGGCCCCAAGGCTaGCATTGGCCCCTAGCCTGTCCCAGGAAGGAAACT +
Preference number: 3 (lower is better)
Translates to: AVRGLLVSRPQG*HWPLACPRKET
Trigger: AGTTTCCTTCCTGGGACAGGCTAGGGGCCAATGTCAGCCTTGGGGCCGACTCACCAGGAGGCCTCGCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 72 bp CCTTCCTGGGTGCCCGCAGCGGGGAGAGCGCGGCCGTaGCGAGGAGTCCGTTGCGTTTCTAGTTACAGAAAT +
Preference number: 3 (lower is better)
Translates to: PSWVPAAGRARP*RGVRCVSSYRN
Trigger: ATTTCTGTAACTAGAAACGCAACGGACTCCTCGCCACGGCCGCGCTCTCCCCGCTGCGGGCACCCAGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 72 bp AAGCCGGCCACCGTCTCACCTTTGTCCGCCAAGAACTaGAGGGAGGAGAGGGTAGCCCAGGCTGTGGACAGG +
Preference number: 3 (lower is better)
Translates to: KPATVSPLSAKN*REERVAQAVDR
Trigger: CCTGTCCACAGCCTGGGCTACCCTCTCCTCCCTCCAGTTCTTGGCGGACAAAGGTGAGACGGTGGCCGGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR TCA 72 bp AGAATGCCCAGTCCTCATCAAGCCTTGAGAGGGGCTTaGGCCAAGCAACAGGGCAGTGGCCCTCCAGCCCTG +
Preference number: 3 (lower is better)
Translates to: RMPSPHQALRGA*AKQQGSGPPAL
Trigger: CAGGGCTGGAGGGCCACTGCCCTGTTGCTTGGCTCAAGCCCCTCTCAAGGCTTGATGAGGACTGGGCATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR GCA 72 bp CACTGTACCCAGTCCCAGAGGGCGCTTAAAGGAGCATaGAGTGCCTGTCCTCTTAGTAACGTGCCCTGGGGC +
Preference number: 3 (lower is better)
Translates to: HCTQSQRALKGA*SACPLSNVPWG
Trigger: GCCCCAGGGCACGTTACTAAGAGGACAGGCACTGCATGCTCCTTTAAGCGCCCTCTGGGACTGGGTACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 72 bp GTCTGGGCCCAGGTCATGCAACTTTGGTTCCCTAATTaGTGTCGATGCTGCCTCCTCCCCAGCTACCCAGCC +
Preference number: 3 (lower is better)
Translates to: VWAQVMQLWFPN*CRCCLLPSYPA
Trigger: GGCTGGGTAGCTGGGGAGGAGGCAGCATCGACACCAATTAGGGAACCAAAGTTGCATGACCTGGGCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR-3UTR CAA 90 bp CCCAGTCCCAGAGGGCGCTTAAAGGAGCATGCAGTGCCTGTCCTCTTAGTAACGGTCCCCAAGCAGGACTaGCAGAATGGGGACCAAGAG +
Preference number: 3 (lower is better)
Translates to: PSPRGRLKEHAVPVLLVTVPKQD*QNGDQE
Trigger: CTCTTGGTCCCCATTCTGCAAGTCCTGCTTGGGGAC...CGTTACTAAGAGGACAGGCACTGCATGCTCCTTTAAGCGCCCTCTGGGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 72 bp ACACACACACACACACACACACACAGGTGGGGCTGGTaGAGCGGAAGCGCCAAGGATGAGTTTGGGAAAGCC +
Preference number: 3 (lower is better)
Translates to: THTHTHTHRWGW*SGSAKDEFGKA
Trigger: GGCTTTCCCAAACTCATCCTTGGCGCTTCCGCTCCACCAGCCCCACCTGTGTGTGTGTGTGTGTGTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR GCA 72 bp CAGAACAACCAGGCAGCTGGGTCCCCAAGCAGGACTTaGAGAATGGGGACCAAGAGAGGGAATATCAGAGGC +
Preference number: 3 (lower is better)
Translates to: QNNQAAGSPSRT*RMGTKRGNIRG
Trigger: GCCTCTGATATTCCCTCTCTTGGTCCCCATTCTGCAAGTCCTGCTTGGGGACCCAGCTGCCTGGTTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR GCA 72 bp CCACTGGCCACACCTGAGCCGTTTGATGGCACCAGCTaGAGTTCTCTCTGCCTTGGGCTCAAGGAAAAAGAG +
Preference number: 3 (lower is better)
Translates to: PLATPEPFDGTS*SSLCLGLKEKE
Trigger: CTCTTTTTCCTTGAGCCCAAGGCAGAGAGAACTGCAGCTGGTGCCATCAAACGGCTCAGGTGTGGCCAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 72 bp CACACACACACACACACACACACACACAGGTGGGGCTaGTGGAGCGGAAGCGCCAAGGATGAGTTTGGGAAA +
Preference number: 3 (lower is better)
Translates to: HTHTHTHTHRWG*WSGSAKDEFGK
Trigger: TTTCCCAAACTCATCCTTGGCGCTTCCGCTCCACCAGCCCCACCTGTGTGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 72 bp TTGCCAACCAGAGTCTGGGCCCAGGTCATGCAACTTTaGTTCCCTAATTGGTGTCGATGCTGCCTCCTCCCC +
Preference number: 3 (lower is better)
Translates to: LPTRVWAQVMQL*FPNWCRCCLLP
Trigger: GGGGAGGAGGCAGCATCGACACCAATTAGGGAACCAAAGTTGCATGACCTGGGCCCAGACTCTGGTTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR TCA 72 bp CCCAAAAGGCAAAACCACTGCAAGGGAGGGCAGACTTaGAGGATGGTGGGCCCTAGGTCCTACACTTCCAAC +
Preference number: 3 (lower is better)
Translates to: PKRQNHCKGGQT*RMVGPRSYTSN
Trigger: GTTGGAAGTGTAGGACCTAGGGCCCACCATCCTTCAAGTCTGCCCTCCCTTGCAGTGGTTTTGCCTTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR GCA 72 bp CCTGAGCCGTTTGATGGCACCAGCTGCAGTTCTCTCTaGCTTGGGCTCAAGGAAAAAGAGGTGGTGAGGTCA +
Preference number: 3 (lower is better)
Translates to: PEPFDGTSCSSL*LGLKEKEVVRS
Trigger: TGACCTCACCACCTCTTTTTCCTTGAGCCCAAGGCAGAGAGAACTGCAGCTGGTGCCATCAAACGGCTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 72 bp CCTAGGTCCTACACTTCCAACTTGATGGCTACTGCCTaGAAGAATGCCCAGTCCTCATCAAGCCTTGAGAGG +
Preference number: 3 (lower is better)
Translates to: PRSYTSNLMATA*KNAQSSSSLER
Trigger: CCTCTCAAGGCTTGATGAGGACTGGGCATTCTTCCAGGCAGTAGCCATCAAGTTGGAAGTGTAGGACCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR GCA 72 bp GGTTTTGTTGTGGGCTGTTTTCATCAACGGAAACTTTaGTCTTGCCAACCAGAGTCTGGGCCCAGGTCATGC +
Preference number: 3 (lower is better)
Translates to: GFVVGCFHQRKL*SCQPESGPRSC
Trigger: GCATGACCTGGGCCCAGACTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAAACAGCCCACAACAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR TCA 72 bp CTGGAAATGTGCTCTGATGGACAGGCTGAAGGGGAATaGTGGCCTCTTCCAGATGCAGATGAAGAAGGAAAC +
Preference number: 3 (lower is better)
Translates to: LEMCSDGQAEGE*WPLPDADEEGN
Trigger: GTTTCCTTCTTCATCTGCATCTGGAAGAGGCCATCATTCCCCTTCAGCCTGTCCATCAGAGCACATTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125867.2
3UTR GCA 72 bp GTTGTGGGCTGTTTTCATCAACGGAAACTTTGCTCTTaGCAACCAGAGTCTGGGCCCAGGTCATGCAACTTT +
Preference number: 3 (lower is better)
Translates to: VVGCFHQRKLCS*QPESGPRSCNF
Trigger: AAAGTTGCATGACCTGGGCCCAGACTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAAACAGCCCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CCA 72 bp TCATCAACGGAAACTTTGCTCTTGCCAACCAGAGTCTaGGCCCAGGTCATGCAACTTTGGTTCCCTAATTGG +
Preference number: 3 (lower is better)
Translates to: SSTETLLLPTRV*AQVMQLWFPNW
Trigger: CCAATTAGGGAACCAAAGTTGCATGACCTGGGCCCAGACTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR-3UTR CAA 90 bp TGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACATTCATCAACGGAAACTTaGCTCTTGCCAACCAGAGTC +
Preference number: 3 (lower is better)
Translates to: CNLSYLQGFWTALHCPAHSSTET*LLPTRV
Trigger: GACTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGA...ATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR GCA 72 bp CTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTaGCCTGCACATAGGTCTGCTGAAACAGAAGCGACA +
Preference number: 3 (lower is better)
Translates to: LSYLQGFWTALH*PAHRSAETEAT
Trigger: TGTCGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
3UTR GCA 72 bp GCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTaGATTGCCCTGCACATAGGTCTGCTGAAACAGAAG +
Preference number: 3 (lower is better)
Translates to: ATSPIYKGFGLH*IALHIGLLKQK
Trigger: CTTCTGTTTCAGCAGACCTATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
3UTR CCA 72 bp GATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTaGACTGCATTGCATTGCCCTGCACATAGGTCTGCT +
Preference number: 3 (lower is better)
Translates to: DLACNLSYLQGF*TALHCPAHRSA
Trigger: AGCAGACCTATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
3UTR-3UTR CAA 90 bp TGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACACCTATTTACAAGGGTTTaGGACTGCATTGCATTGCCC +
Preference number: 3 (lower is better)
Translates to: WHKEHKINTESGCEIPKHLFTRV*DCIALP
Trigger: GGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAG...GTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
3UTR TCA 72 bp GAAACAGAAGCGACACTCTTCTCACTACCAGGCTACTaGAATATTGCACTCAGAGTAGAAGTCACCTGGATG +
Preference number: 3 (lower is better)
Translates to: ETEATLFSLPGY*NIALRVEVTWM
Trigger: CATCCAGGTGACTTCTACTCTGAGTGCAATATTTCAGTAGCCTGGTAGTGAGAAGAGTGTCGCTTCTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp GCCTGCTCCTCCACGAAGGCACCGGGCAGGACTTCCTCGGTGGGCACGGGCCTCGGATCGGCCACCGAATaGCGGCGGGACTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: ACSSTKAPGRTSSVGTGLGSATE*RRDSGS
Trigger: TGACCCAGAGTCCCGCCGGCATTCGGTGGCCGATCC...GAGGCCCGTGCCCACCGAGGAAGTCCTGCCCGGTGCCTTCGTGGAGGAGCAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp GCCTGCTCCTCCACGAAGGCACCGGGCAGGACTTCCTCGGTGGGCACGGGCCTCGACTCCTCTGCCCGCTaGGCCTGTGGATGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: ACSSTKAPGRTSSVGTGLDSSAR*ACGWLS
Trigger: GGACAACCATCCACAGGCTCAGCGGGCAGAGGAGTC...GAGGCCCGTGCCCACCGAGGAAGTCCTGCCCGGTGCCTTCGTGGAGGAGCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CAA 72 bp GGTTCCGCTCCTCTCCACGCCTCCTCGCCACCTTTATaGCAACGTCTGCTCCGGCGGGGCGAGGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GSAPLHASSPPL*QRLLRRGEARL
Trigger: GAGCCTGGCCTCGCCCCGCCGGAGCAGACGTTGCAATAAAGGTGGCGAGGAGGCGTGGAGAGGAGCGGAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CAA 72 bp GGGAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTaGGCGAGGAGCCACGGGACAGGGGGAGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: GRVCPPAPRIQS*ARSHGTGGAGG
Trigger: GCCGCCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp GCCTGCTCCTCCACGAAGGCACCGGGCAGGACTTCCTCGGTGGGCACGGGCCTCACCAGCACCAGCAGCTaGGGCCTCCAGTTCTTCGTA +
Preference number: 4 (lower is better)
Translates to: ACSSTKAPGRTSSVGTGLTSTSS*GLQFFV
Trigger: TACGAAGAACTGGAGGCCCCAGCTGCTGGTGCTGGT...GAGGCCCGTGCCCACCGAGGAAGTCCTGCCCGGTGCCTTCGTGGAGGAGCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp GCTCCACGAATTCAGTCTTTGGCGAGGAGCCACGGGACAGGGGGAGCAGGCGGCACCAGCAGGGCGAGGTaGCCGGCTGTAGTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: APRIQSLARSHGTGGAGGTSRAR*PAVVSR
Trigger: CCGGGAAACTACAGCCGGCCACCTCGCCCTGCTGGT...GCCGCCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp CACGCCTCCTCGCCACCTTTATTGCAACGTCTGCTCCGGCGGGGCGAGGCCAGGGGCGGAGCCGGGGGTTaGCTGGATTCTTCCTCCGAA +
Preference number: 4 (lower is better)
Translates to: HASSPPLLQRLLRRGEARGGAGG*LDSSSE
Trigger: TTCGGAGGAAGAATCCAGCCAACCCCCGGCTCCGCC...CCTGGCCTCGCCCCGCCGGAGCAGACGTTGCAATAAAGGTGGCGAGGAGGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp CCACGCCTCCTCGCCACCTTTATTGCAACGTCTGCTCCGGCGGGGCGAGGCCAGGGATGCACCACGTTCTaGTCCTGGTCCACACGCACC +
Preference number: 4 (lower is better)
Translates to: PRLLATFIATSAPAGRGQGCTTF*SWSTRT
Trigger: GGTGCGTGTGGACCAGGATCAGAACGTGGTGCATCC...CTGGCCTCGCCCCGCCGGAGCAGACGTTGCAATAAAGGTGGCGAGGAGGCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp GCCTGCTCCTCCACGAAGGCACCGGGCAGGACTTCCTCGGTGGGCACGGGCCTCCCATCTGGGCCACGGTaGAGATCCGCATTTTGCATT +
Preference number: 4 (lower is better)
Translates to: ACSSTKAPGRTSSVGTGLPSGPR*RSAFCI
Trigger: AATGCAAAATGCGGATCTTCACCGTGGCCCAGATGG...GAGGCCCGTGCCCACCGAGGAAGTCCTGCCCGGTGCCTTCGTGGAGGAGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp CCACGCCTCCTCGCCACCTTTATTGCAACGTCTGCTCCGGCGGGGCGAGGCCAGTGCCATCGTACTCTCTaGCCTTCTCCGTGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: PRLLATFIATSAPAGRGQCHRTL*PSPCPC
Trigger: GCACGGACACGGAGAAGGGCAGAGAGTACGATGGCA...CTGGCCTCGCCCCGCCGGAGCAGACGTTGCAATAAAGGTGGCGAGGAGGCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp CACGCCTCCTCGCCACCTTTATTGCAACGTCTGCTCCGGCGGGGCGAGGCCAGGGAGAGCATAGCGTGCTaGACTGAGAGACAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: HASSPPLLQRLLRRGEARESIAC*TERQAS
Trigger: CGAGGCCTGTCTCTCAGTGCAGCACGCTATGCTCTC...CCTGGCCTCGCCCCGCCGGAGCAGACGTTGCAATAAAGGTGGCGAGGAGGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp GGCCAGGGCCCTGGGGCTGGAGGCACTGTACCCAGTCCCAGAGGGCGCTTAAAGACCACACGTCAATGCTaGCCTCCGAGAAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: GQGPGAGGTVPSPRGRLKTTRQC*PPRSAQ
Trigger: CTGAGCGCTTCTCGGAGGGCAGCATTGACGTGTGGT...CTTTAAGCGCCCTCTGGGACTGGGTACAGTGCCTCCAGCCCCAGGGCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp GAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTTGGCGAGGAGCCACGGGACTGCCATCCCGGGAGATaGCCTGCAGCAGACGTGGGG +
Preference number: 4 (lower is better)
Translates to: EGVPSSSTNSVFGEEPRDCHPGR*PAADVG
Trigger: CCCCACGTCTGCTGCAGGCCATCTCCCGGGATGGCA...GTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CAA 72 bp AGCTCGCATCCACCGAAGCCGGCCACCGTCTCACCTTaGTCCGCCAAGAACTGGAGGGAGGAGAGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SSHPPKPATVSP*SAKNWREERVA
Trigger: GGCTACCCTCTCCTCCCTCCAGTTCTTGGCGGACAAAGGTGAGACGGTGGCCGGCTTCGGTGGATGCGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp GCCTGCTCCTCCACGAAGGCACCGGGCAGGACTTCCTCGGTGGGCACGGGCCTCACAGAACAACAGAGCTaGTGTAGACAGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ACSSTKAPGRTSSVGTGLTEQQS*CRQQRW
Trigger: CCACCTCTGCTGTCTACATCAGCTCTGTTGTTCTGT...GAGGCCCGTGCCCACCGAGGAAGTCCTGCCCGGTGCCTTCGTGGAGGAGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp CACACAGGTGGGGCTGGTGGAGCGGAAGCGCCAAGGATGAGTTTGGGAAAGCCAGGCCCTTCCCTGCCTTaGGCTGGGAGGTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: HTGGAGGAEAPRMSLGKPGPSLP*AGRSGR
Trigger: TCTCCCTGACCTCCCAGCTCAAGGCAGGGAAGGGCC...TGGCTTTCCCAAACTCATCCTTGGCGCTTCCGCTCCACCAGCCCCACCTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp GCTCCACGAATTCAGTCTTTGGCGAGGAGCCACGGGACAGGGGGAGCAGGCGGCGGTTGTCCAGAAAGGTaGCCTCAAGGACGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: APRIQSLARSHGTGGAGGGCPER*PQGRSP
Trigger: TGGGCTCCGTCCTTGAGGGCACCTTTCTGGACAACC...GCCGCCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp GGCCAGGGCCCTGGGGCTGGAGGCACTGTACCCAGTCCCAGAGGGCGCTTAAAGGGCAGATCGGGAAATTaGGTGGGTCGAAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: GQGPGAGGTVPSPRGRLKGRSGN*VGRRQT
Trigger: AGTCTGCCTTCGACCCACCCAATTTCCCGATCTGCC...CTTTAAGCGCCCTCTGGGACTGGGTACAGTGCCTCCAGCCCCAGGGCCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp TCCGCCAAGAACTGGAGGGAGGAGAGGGTAGCCCAGGCTGTGGACAGGAAAGGGCCGAGGCCCCCAGACTaGATCAGGTGGGACACACCA +
Preference number: 4 (lower is better)
Translates to: SAKNWREERVAQAVDRKGPRPPD*IRWDTP
Trigger: TGGTGTGTCCCACCTGATCCAGTCTGGGGGCCTCGG...CCCTTTCCTGTCCACAGCCTGGGCTACCCTCTCCTCCCTCCAGTTCTTGGCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp TGTACACTATGTATAGCGCGACCGAGCGGCACCCGGGCTCGGCGACCAGGGTCCCAGCTGGGAGCACTCTaGTCATGGATCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: CTLCIARPSGTRARRPGSQLGAL*SWISCT
Trigger: GGTGCAGCTGATCCATGACCAGAGTGCTCCCAGCTG...GGACCCTGGTCGCCGAGCCCGGGTGCCGCTCGGTCGCGCTATACATAGTGTACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp CAGTCTTTGGCGAGGAGCCACGGGACAGGGGGAGCAGGCGGCAAGCCAAGAGAGGGTAAGATGCACCTCTaGGTCTGTCTCCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QSLARSHGTGGAGGKPREGKMHL*VCLPLP
Trigger: GGGGAGAGGGAGACAGACCCAGAGGTGCATCTTACC...CTCTCTTGGCTTGCCGCCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp TGTACACTATGTATAGCGCGACCGAGCGGCACCCGGGCTCGGCGACCAGGGTCCTGCCCGCTGAGCCTGTaGATGGTTGTCCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: CTLCIARPSGTRARRPGSCPLSL*MVVQKG
Trigger: ACCTTTCTGGACAACCATCCACAGGCTCAGCGGGCA...GGACCCTGGTCGCCGAGCCCGGGTGCCGCTCGGTCGCGCTATACATAGTGTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp AGAGGCTGTGCGAGGCCTCCTGGTGAGTCGGCCCCAAGGCTGACATTGGCCCCTCACCATCACGCAGGTTaGAGGAGATCACTACCTGGC +
Preference number: 4 (lower is better)
Translates to: RGCARPPGESAPRLTLAPHHHAG*RRSLPG
Trigger: GCCAGGTAGTGATCTCCTCCAACCTGCGTGATGGTG...AGGGGCCAATGTCAGCCTTGGGGCCGACTCACCAGGAGGCCTCGCACAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp AGAGGCTGTGCGAGGCCTCCTGGTGAGTCGGCCCCAAGGCTGACATTGGCCCCTCTGTTATCGTCCATCTaGGCCACGGTGAAGATCCGC +
Preference number: 4 (lower is better)
Translates to: RGCARPPGESAPRLTLAPLLSSI*ATVKIR
Trigger: GCGGATCTTCACCGTGGCCCAGATGGACGATAACAG...AGGGGCCAATGTCAGCCTTGGGGCCGACTCACCAGGAGGCCTCGCACAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp CAGTCTTTGGCGAGGAGCCACGGGACAGGGGGAGCAGGCGGCAAGCCAAGAGAGGATTCTTCCTCCGAATaGAGCCCCGAGACTCGTCTG +
Preference number: 4 (lower is better)
Translates to: QSLARSHGTGGAGGKPREDSSSE*SPETRL
Trigger: CAGACGAGTCTCGGGGCTCCATTCGGAGGAAGAATC...CTCTCTTGGCTTGCCGCCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp CAGGGCCCTGGGGCTGGAGGCACTGTACCCAGTCCCAGAGGGCGCTTAAAGGAGGATTCTTCCTCCGAATaGAGCCCCGAGACTCGTCTG +
Preference number: 4 (lower is better)
Translates to: QGPGAGGTVPSPRGRLKEDSSSE*SPETRL
Trigger: CAGACGAGTCTCGGGGCTCCATTCGGAGGAAGAATC...CTCCTTTAAGCGCCCTCTGGGACTGGGTACAGTGCCTCCAGCCCCAGGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp GAAAAAGAGGTGGTGAGGTCAGCTAGTGGTCCTGGCCCTGGAGTGAGCATGATGATGCCGGCGGGACTCTaGGTCAGCGGAGGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: EKEVVRSASGPGPGVSMMMPAGL*VSGGGG
Trigger: TCCGCCGCCTCCGCTGACCCAGAGTCCCGCCGGCAT...CATCATGCTCACTCCAGGGCCAGGACCACTAGCTGACCTCACCACCTCTTTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp CGAATTCAGTCTTTGGCGAGGAGCCACGGGACAGGGGGAGCAGGCGGCAAGCCAGCACAGCTGTGTGCATaGGCCGTACATTGGACTGGT +
Preference number: 4 (lower is better)
Translates to: RIQSLARSHGTGGAGGKPAQLCA*AVHWTG
Trigger: ACCAGTCCAATGTACGGCGCATGCACACAGCTGTGC...TGGCTTGCCGCCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTGAATTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp CGAATTCAGTCTTTGGCGAGGAGCCACGGGACAGGGGGAGCAGGCGGCAAGCCAGGCAGATCGGGAAATTaGGTGGGTCGAAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: RIQSLARSHGTGGAGGKPGRSGN*VGRRQT
Trigger: AGTCTGCCTTCGACCCACCCAATTTCCCGATCTGCC...TGGCTTGCCGCCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTGAATTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CAA 72 bp CAGGAAAGGGAAAGGAGAGCGCCGGCCTTAAAGCACTaGGCTCTCAGCTCGGGAGCGCAGGGAAACCTGGCT +
Preference number: 4 (lower is better)
Translates to: QERERRAPALKH*ALSSGAQGNLA
Trigger: AGCCAGGTTTCCCTGCGCTCCCGAGCTGAGAGCCAAGTGCTTTAAGGCCGGCGCTCTCCTTTCCCTTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp GAAAAAGAGGTGGTGAGGTCAGCTAGTGGTCCTGGCCCTGGAGTGAGCATGATGTGCCATCCCGGGAGATaGCCTGCAGCAGACGTGGGG +
Preference number: 4 (lower is better)
Translates to: EKEVVRSASGPGPGVSMMCHPGR*PAADVG
Trigger: CCCCACGTCTGCTGCAGGCCATCTCCCGGGATGGCA...CATCATGCTCACTCCAGGGCCAGGACCACTAGCTGACCTCACCACCTCTTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp TGTACACTATGTATAGCGCGACCGAGCGGCACCCGGGCTCGGCGACCAGGGTCCCCATTAGCTTTGCCATaGCCAAAGACCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CTLCIARPSGTRARRPGSPLALP*PKTCRK
Trigger: CTTCCTGCAGGTCTTTGGCCATGGCAAAGCTAATGG...GGACCCTGGTCGCCGAGCCCGGGTGCCGCTCGGTCGCGCTATACATAGTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp AAATGTGCTCTGATGGACAGGCTGAAGGGGAATGATGGCCTCTTCCAGATGCAGATGCCGGCGGGACTCTaGGTCAGCGGAGGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: KCALMDRLKGNDGLFQMQMPAGL*VSGGGG
Trigger: TCCGCCGCCTCCGCTGACCCAGAGTCCCGCCGGCAT...CTGCATCTGGAAGAGGCCATCATTCCCCTTCAGCCTGTCCATCAGAGCACATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000125867.2
3UTR CAA 72 bp AAGAATGCCCAGTCCTCATCAAGCCTTGAGAGGGGCTaGAGCCAAGCAACAGGGCAGTGGCCCTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: KNAQSSSSLERG*SQATGQWPSSP
Trigger: AGGGCTGGAGGGCCACTGCCCTGTTGCTTGGCTCAAGCCCCTCTCAAGGCTTGATGAGGACTGGGCATTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp AATGCCCAGTCCTCATCAAGCCTTGAGAGGGGCTTGAGCCAAGCAACAGGGCAGAGTTGGCCAGCCCACTaGGCAGGGAGGATACCATGG +
Preference number: 4 (lower is better)
Translates to: NAQSSSSLERGLSQATGQSWPAH*AGRIPW
Trigger: CCATGGTATCCTCCCTGCTCAGTGGGCTGGCCAACT...CTGCCCTGTTGCTTGGCTCAAGCCCCTCTCAAGGCTTGATGAGGACTGGGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp CACGCCTCCTCGCCACCTTTATTGCAACGTCTGCTCCGGCGGGGCGAGGCCAGGTACAGGAGCAGCAAATaGAGACCATACAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: HASSPPLLQRLLRRGEARYRSSK*RPYRRT
Trigger: AGTCCTTCTGTATGGTCTTCATTTGCTGCTCCTGTA...CCTGGCCTCGCCCCGCCGGAGCAGACGTTGCAATAAAGGTGGCGAGGAGGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp TGTCTCCTGTACACTATGTATAGCGCGACCGAGCGGCACCCGGGCTCGGCGACCACAGAACAACAGAGCTaGTGTAGACAGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: CLLYTMYSATERHPGSATTEQQS*CRQQRW
Trigger: CCACCTCTGCTGTCTACATCAGCTCTGTTGTTCTGT...GGTCGCCGAGCCCGGGTGCCGCTCGGTCGCGCTATACATAGTGTACAGGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp GAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTTGGCGAGGAGCCACGGGACCCCACTGGCATCTTCTaGCTTGAAGATGGCCATAGC +
Preference number: 4 (lower is better)
Translates to: EGVPSSSTNSVFGEEPRDPTGIF*LEDGHS
Trigger: GCTATGGCCATCTTCAAGGCAGAAGATGCCAGTGGG...GTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp CATGCCCAGGAAGGAGAGAGTCCAGTGGTAATAGCGAAATCGTGGCCTCCAGTTTGCCATCACCGGGGTTaGCTCCCCCATCGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: HAQEGESPVVIAKSWPPVCHHRG*LPHRRP
Trigger: AGGACGGCGATGGGGGAGCCAACCCCGGTGATGGCA...AACTGGAGGCCACGATTTCGCTATTACCACTGGACTCTCTCCTTCCTGGGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000202136.2
CDS-3UTR TCA 90 bp TCCAGCTCCACGAATTCAGTCTTTGGCGAGGAGCCACGGGACAGGGGGAGCAGGAGGAGGTCATATCACTaGAGACATAGGGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SSSTNSVFGEEPRDRGSRRRSYH*RHRGGP
Trigger: TGGACCACCCCTATGTCTTCAGTGATATGACCTCCT...CCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp GAAGGAAACTGGGGAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTTGGCGAACCACACGTCAATGCTaGCCTCCGAGAAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: EGNWGGCALQLHEFSLWRTTRQC*PPRSAQ
Trigger: CTGAGCGCTTCTCGGAGGGCAGCATTGACGTGTGGT...TCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTCCCCAGTTTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp CCCAGTCCCAGAGGGCGCTTAAAGGAGCATGCAGTGCCTGTCCTCTTAGTAACGATCGTGGCCTCCAGTTaGGTGTCCTCAGCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: PSPRGRLKEHAVPVLLVTIVASS*VSSAAS
Trigger: AGACGCTGCTGAGGACACCCAACTGGAGGCCACGAT...CGTTACTAAGAGGACAGGCACTGCATGCTCCTTTAAGCGCCCTCTGGGACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp CATGCCCAGGAAGGAGAGAGTCCAGTGGTAATAGCGAAATCGTGGCCTCCAGTTAGTTGGCCAGCCCACTaGGCAGGGAGGATACCATGG +
Preference number: 4 (lower is better)
Translates to: HAQEGESPVVIAKSWPPVSWPAH*AGRIPW
Trigger: CCATGGTATCCTCCCTGCTCAGTGGGCTGGCCAACT...AACTGGAGGCCACGATTTCGCTATTACCACTGGACTCTCTCCTTCCTGGGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202136.2
CDS-3UTR TCA 90 bp CACACAGGTGGGGCTGGTGGAGCGGAAGCGCCAAGGATGAGTTTGGGAAAGCCATACCAACGAGCAGGGTaGAGTAGGAGGTCATATCAC +
Preference number: 4 (lower is better)
Translates to: HTGGAGGAEAPRMSLGKPYQRAG*SRRSYH
Trigger: GTGATATGACCTCCTACTTCACCCTGCTCGTTGGTA...TGGCTTTCCCAAACTCATCCTTGGCGCTTCCGCTCCACCAGCCCCACCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp GCATTGCATTGCCCTGCACATAGGTCTGCTGAAACAGAAGCGACACTCTTCTCAGGCCCTTCCCTGCCTTaGGCTGGGAGGTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ALHCPAHRSAETEATLFSGPSLP*AGRSGR
Trigger: TCTCCCTGACCTCCCAGCTCAAGGCAGGGAAGGGCC...TGAGAAGAGTGTCGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAATGCAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp AATGCCCAGTCCTCATCAAGCCTTGAGAGGGGCTTGAGCCAAGCAACAGGGCAGCCATGGCCAAAGACCTaGAGGAAGGGCACTATGCCA +
Preference number: 4 (lower is better)
Translates to: NAQSSSSLERGLSQATGQPWPKT*RKGTMP
Trigger: TGGCATAGTGCCCTTCCTGCAGGTCTTTGGCCATGG...CTGCCCTGTTGCTTGGCTCAAGCCCCTCTCAAGGCTTGATGAGGACTGGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp GACACGGCCTCTGTCTTTAATGTGCTTGAACCAGCATCCTCTGGAAATGTGCTCGGATCGGCCACCGAATaGCGGCGGGACTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: DTASVFNVLEPASSGNVLGSATE*RRDSGS
Trigger: TGACCCAGAGTCCCGCCGGCATTCGGTGGCCGATCC...GAGCACATTTCCAGAGGATGCTGGTTCAAGCACATTAAAGACAGAGGCCGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125867.2
CDS-3UTR CCA 90 bp GAAGGAAACTGGGGAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTTGGCGACGGAGGAGACGGGACTaGGGCCTTTATTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: EGNWGGCALQLHEFSLWRRRRRD*GLYSSL
Trigger: CAGAGAAGAATAAAGGCCCCAGTCCCGTCTCCTCCG...TCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTCCCCAGTTTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp ATTGCCCTGCACATAGGTCTGCTGAAACAGAAGCGACACTCTTCTCACTACCAGGACTCCTCTGCCCGCTaGGCCTGTGGATGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: IALHIGLLKQKRHSSHYQDSSAR*ACGWLS
Trigger: GGACAACCATCCACAGGCTCAGCGGGCAGAGGAGTC...CTGGTAGTGAGAAGAGTGTCGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp GAAGGAAACTGGGGAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTTGGCGACCCGGACCAGTTCGATaGAGTTCCTCCATGTCTGAT +
Preference number: 4 (lower is better)
Translates to: EGNWGGCALQLHEFSLWRPGPVR*SSSMSD
Trigger: ATCAGACATGGAGGAACTTCATCGAACTGGTCCGGG...TCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTCCCCAGTTTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp ACACGGCCTCTGTCTTTAATGTGCTTGAACCAGCATCCTCTGGAAATGTGCTCTGAGGCTGTGGCCCTTTaGCGTCTTCCCTCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: TRPLSLMCLNQHPLEMCSEAVAL*RLPSGA
Trigger: GGCTCCCGAGGGAAGACGTCAAAGGGCCACAGCCTC...AGAGCACATTTCCAGAGGATGCTGGTTCAAGCACATTAAAGACAGAGGCCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000125867.2
CDS-3UTR GCA 90 bp CATGCCCAGGAAGGAGAGAGTCCAGTGGTAATAGCGAAATCGTGGCCTCCAGTTTGCCATCGTACTCTCTaGCCTTCTCCGTGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: HAQEGESPVVIAKSWPPVCHRTL*PSPCPC
Trigger: GCACGGACACGGAGAAGGGCAGAGAGTACGATGGCA...AACTGGAGGCCACGATTTCGCTATTACCACTGGACTCTCTCCTTCCTGGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202136.2
CDS-3UTR GCA 90 bp GCCACCTTTATTGCAACGTCTGCTCCGGCGGGGCGAGGCCAGGCTCAGAAAAGGACCATTGGTTGCGATTaGACTCATGGAAATGGCTGT +
Preference number: 4 (lower is better)
Translates to: ATFIATSAPAGRGQAQKRTIGCD*THGNGC
Trigger: ACAGCCATTTCCATGAGTGCAATCGCAACCAATGGT...CCTTTTCTGAGCCTGGCCTCGCCCCGCCGGAGCAGACGTTGCAATAAAGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp CATGCCCAGGAAGGAGAGAGTCCAGTGGTAATAGCGAAATCGTGGCCTCCAGTTAGGGACTGCTCTCTTTaGGGTTGCCATCACCGGGGT +
Preference number: 4 (lower is better)
Translates to: HAQEGESPVVIAKSWPPVRDCSL*GCHHRG
Trigger: ACCCCGGTGATGGCAACCCCAAAGAGAGCAGTCCCT...AACTGGAGGCCACGATTTCGCTATTACCACTGGACTCTCTCCTTCCTGGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202136.2
CDS-3UTR CCA 90 bp CATGCCCAGGAAGGAGAGAGTCCAGTGGTAATAGCGAAATCGTGGCCTCCAGTTCAGCAGCGCCCAGGTTaGCTCTCCATTAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: HAQEGESPVVIAKSWPPVQQRPG*LSISFA
Trigger: GGCAAAGCTAATGGAGAGCCAACCTGGGCGCTGCTG...AACTGGAGGCCACGATTTCGCTATTACCACTGGACTCTCTCCTTCCTGGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202136.2
CDS-3UTR CCA 90 bp ATTGCCCTGCACATAGGTCTGCTGAAACAGAAGCGACACTCTTCTCACTACCAGCCGAGGCCCCCAGACTaGATCAGGTGGGACACACCA +
Preference number: 4 (lower is better)
Translates to: IALHIGLLKQKRHSSHYQPRPPD*IRWDTP
Trigger: TGGTGTGTCCCACCTGATCCAGTCTGGGGGCCTCGG...CTGGTAGTGAGAAGAGTGTCGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CAA 72 bp GGTGGGGCTGGTGGAGCGGAAGCGCCAAGGATGAGTTaGGGAAAGCCAAAGGCCTTGAGTTCTACTCAGAAA +
Preference number: 4 (lower is better)
Translates to: GGAGGAEAPRMS*GKPKALSSTQK
Trigger: TTTCTGAGTAGAACTCAAGGCCTTTGGCTTTCCCAAACTCATCCTTGGCGCTTCCGCTCCACCAGCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp AAACTTTGCTCTTGCCAACCAGAGTCTGGGCCCAGGTCATGCAACTTTGGTTCCTGGAAACATTCTTGGTaGCCAGCAGGGCGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: KLCSCQPESGPRSCNFGSWKHSW*PAGRGG
Trigger: GCCACCTCGCCCTGCTGGTCACCAAGAATGTTTCCA...GGAACCAAAGTTGCATGACCTGGGCCCAGACTCTGGTTGGCAAGAGCAAAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp GAAAAAGAGGTGGTGAGGTCAGCTAGTGGTCCTGGCCCTGGAGTGAGCATGATGCCATCTGGGCCACGGTaGAGATCCGCATTTTGCATT +
Preference number: 4 (lower is better)
Translates to: EKEVVRSASGPGPGVSMMPSGPR*RSAFCI
Trigger: AATGCAAAATGCGGATCTTCACCGTGGCCCAGATGG...CATCATGCTCACTCCAGGGCCAGGACCACTAGCTGACCTCACCACCTCTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp GAAGGAAACTGGGGAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTTGGCGAGAGATTTATTCACGATaGCCTCGTTCAGCCGCACAG +
Preference number: 4 (lower is better)
Translates to: EGNWGGCALQLHEFSLWREIYSR*PRSAAQ
Trigger: CTGTGCGGCTGAACGAGGTCATCGTGAATAAATCTC...TCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTCCCCAGTTTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp GAAGGAAACTGGGGAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTTGGCGACTTCTCGTAGGTGTATaGCGAGATGTCGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: EGNWGGCALQLHEFSLWRLLVGV*RDVALM
Trigger: CATGAGAGCGACATCTCGGCATACACCTACGAGAAG...TCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTCCCCAGTTTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp AAACTTTGCTCTTGCCAACCAGAGTCTGGGCCCAGGTCATGCAACTTTGGTTCCAGGGACTGCTCTCTTTaGGGTTGCCATCACCGGGGT +
Preference number: 4 (lower is better)
Translates to: KLCSCQPESGPRSCNFGSRDCSL*GCHHRG
Trigger: ACCCCGGTGATGGCAACCCCAAAGAGAGCAGTCCCT...GGAACCAAAGTTGCATGACCTGGGCCCAGACTCTGGTTGGCAAGAGCAAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099092.8
CDS-3UTR CCA 90 bp ATTGCCCTGCACATAGGTCTGCTGAAACAGAAGCGACACTCTTCTCACTACCAGTTCCCTGCCTTGAGCTaGGAGGTCAGGGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: IALHIGLLKQKRHSSHYQFPALS*EVRESS
Trigger: GCTGCTCTCCCTGACCTCCCAGCTCAAGGCAGGGAA...CTGGTAGTGAGAAGAGTGTCGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp GGGTTTTGGACTGCATTGCATTGCCCTGCACATAGGTCTGCTGAAACAGAAGCGGGAGCACTCTGGTCATaGATCAGCTGCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GFWTALHCPAHRSAETEAGALWS*ISCTSS
Trigger: GGAGGAGGTGCAGCTGATCCATGACCAGAGTGCTCC...CGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAATGCAATGCAGTCCAAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp CATGCCCAGGAAGGAGAGAGTCCAGTGGTAATAGCGAAATCGTGGCCTCCAGTTTCATGGAAATGGCTGTaGGCATCGTACAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: HAQEGESPVVIAKSWPPVSWKWL*ASYRSS
Trigger: GCTGCTCCTGTACGATGCTCACAGCCATTTCCATGA...AACTGGAGGCCACGATTTCGCTATTACCACTGGACTCTCTCCTTCCTGGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202136.2
CDS-3UTR GCA 90 bp GCATTGCATTGCCCTGCACATAGGTCTGCTGAAACAGAAGCGACACTCTTCTCACCTGATAGACTCCTCTaGCCGCTGAGCCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: ALHCPAHRSAETEATLFSPDRLL*PLSLWM
Trigger: CATCCACAGGCTCAGCGGGCAGAGGAGTCTATCAGG...TGAGAAGAGTGTCGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAATGCAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp AAACTTTGCTCTTGCCAACCAGAGTCTGGGCCCAGGTCATGCAACTTTGGTTCCTGGTCATGGATCAGCTaGACCTCCTCCTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KLCSCQPESGPRSCNFGSWSWIS*TSSSGF
Trigger: GAAGCCAGAGGAGGAGGTGCAGCTGATCCATGACCA...GGAACCAAAGTTGCATGACCTGGGCCCAGACTCTGGTTGGCAAGAGCAAAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp ATTGCCCTGCACATAGGTCTGCTGAAACAGAAGCGACACTCTTCTCACTACCAGCAGCAGCGCCCAGGTTaGCTCTCCATTAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: IALHIGLLKQKRHSSHYQQQRPG*LSISFA
Trigger: GGCAAAGCTAATGGAGAGCCAACCTGGGCGCTGCTG...CTGGTAGTGAGAAGAGTGTCGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp CTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACTTCCCTGCCTTGAGCTaGGAGGTCAGGGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LATSPIYKGFGLHCIALHFPALS*EVRESS
Trigger: GCTGCTCTCCCTGACCTCCCAGCTCAAGGCAGGGAA...GTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp TCAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCCTACCAGCAGGGCGAGGTaGCCGGCTGTAGTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SIPSRDAKYRNTKIKGRPTSRAR*PAVVSR
Trigger: CCGGGAAACTACAGCCGGCCACCTCGCCCTGCTGGT...AGGCCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp TGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACACGGCGGAGCCGGGGGTTaGCTGGATTCTTCCTCCGAA +
Preference number: 4 (lower is better)
Translates to: WHKEHKINTESGCEIPKHGGAGG*LDSSSE
Trigger: TTCGGAGGAAGAATCCAGCCAACCCCCGGCTCCGCC...GTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp TGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACACAGTTGGCCAGCCCACTaGGCAGGGAGGATACCATGG +
Preference number: 4 (lower is better)
Translates to: WHKEHKINTESGCEIPKHSWPAH*AGRIPW
Trigger: CCATGGTATCCTCCCTGCTCAGTGGGCTGGCCAACT...GTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR TCA 90 bp TCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACATAGGTCTGAGTTGGCCAGCCCACTaGGCAGGGAGGATACCATGG +
Preference number: 4 (lower is better)
Translates to: SPIYKGFGLHCIALHIGLSWPAH*AGRIPW
Trigger: CCATGGTATCCTCCCTGCTCAGTGGGCTGGCCAACT...CAGACCTATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR TCA 90 bp TGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACACGGATGCACCACGTTCTaGTCCTGGTCCACACGCACC +
Preference number: 4 (lower is better)
Translates to: WHKEHKINTESGCEIPKHGCTTF*SWSTRT
Trigger: GGTGCGTGTGGACCAGGATCAGAACGTGGTGCATCC...GTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp TGCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGCAGGAAGGGCACTATaGCATCCCGGGAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: CVLAQRTQDQYRVGMRNTAGRAL*HPGRWP
Trigger: AGGCCATCTCCCGGGATGGCATAGTGCCCTTCCTGC...GGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp CTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACGTCCTCAGCAGCGTCTaGACCGCACAAGCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LATSPIYKGFGLHCIALHVLSSV*TAQAKF
Trigger: GAACTTGGCTTGTGCGGTGCAGACGCTGCTGAGGAC...GTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp CATGCCCAGGAAGGAGAGAGTCCAGTGGTAATAGCGAAATCGTGGCCTCCAGTTCAGGCACAACACCATTaGTTGCGATTGCACTCATGG +
Preference number: 4 (lower is better)
Translates to: HAQEGESPVVIAKSWPPVQAQHH*LRLHSW
Trigger: CCATGAGTGCAATCGCAACCAATGGTGTTGTGCCTG...AACTGGAGGCCACGATTTCGCTATTACCACTGGACTCTCTCCTTCCTGGGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202136.2
CDS-3UTR TCA 90 bp CAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCCTACGGTGGCCATGCAGGTaGGCACACAGGTGCCATACA +
Preference number: 4 (lower is better)
Translates to: QYRVGMRNTETLKLKAGLRWPCR*AHRCHT
Trigger: TGTATGGCACCTGTGTGCTCACCTGCATGGCCACCG...TAGGCCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp GGGTTTTGGACTGCATTGCATTGCCCTGCACATAGGTCTGCTGAAACAGAAGCGAGGAGGTCATATCACTaGAGACATAGGGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GFWTALHCPAHRSAETEARRSYH*RHRGGP
Trigger: TGGACCACCCCTATGTCTTCAGTGATATGACCTCCT...CGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAATGCAATGCAGTCCAAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp TGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACATTGGAAACATTCTTGGTaGCCAGCAGGGCGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: CNLSYLQGFWTALHCPAHWKHSW*PAGRGG
Trigger: GCCACCTCGCCCTGCTGGTCACCAAGAATGTTTCCA...ATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp GATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCGCAGGAAGGGCACTATaGCATCCCGGGAGATGGCCT +
Preference number: 4 (lower is better)
Translates to: DLACNLSYLQGFWTALHCAGRAL*HPGRWP
Trigger: AGGCCATCTCCCGGGATGGCATAGTGCCCTTCCTGC...GCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp CTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACCAAGAGAGCATAGCGTaGTGCACTGAGAGACAGGCC +
Preference number: 4 (lower is better)
Translates to: LATSPIYKGFGLHCIALHQESIA*CTERQA
Trigger: GGCCTGTCTCTCAGTGCAGCACGCTATGCTCTCTTG...GTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp TTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTTGCCATCACCGGGGTTaGCTCCCCCATCGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: LIWLATSPIYKGFGLHCICHHRG*LPHRRP
Trigger: AGGACGGCGATGGGGGAGCCAACCCCGGTGATGGCA...AATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202479.4
CDS-3UTR CCA 90 bp CAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAATGCCATCACCGGGGTTaGCTCCCCCATCGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: QRTQDQYRVGMRNTETLKCHHRG*LPHRRP
Trigger: AGGACGGCGATGGGGGAGCCAACCCCGGTGATGGCA...TTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202479.4
CDS-3UTR CCA 90 bp TGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACACCAGCAGCGCCCAGGTTaGCTCTCCATTAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: WHKEHKINTESGCEIPKHQQRPG*LSISFA
Trigger: GGCAAAGCTAATGGAGAGCCAACCTGGGCGCTGCTG...GTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp TGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACATCAGCTGGGAGCACTCTaGTCATGGATCAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: CNLSYLQGFWTALHCPAHQLGAL*SWISCT
Trigger: GGTGCAGCTGATCCATGACCAGAGTGCTCCCAGCTG...ATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp CTTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATCTCCTCCCCTGGAGATaGCGAGCTGCTAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LDLACNLSYLQGFWTALHLLPWR*RAARAA
Trigger: AGCTGCCCTAGCAGCTCGCCATCTCCAGGGGAGGAG...ATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp CATGCCCAGGAAGGAGAGAGTCCAGTGGTAATAGCGAAATCGTGGCCTCCAGTTCCATGGCCAAAGACCTaGAAATCATGTAGTACGAGC +
Preference number: 4 (lower is better)
Translates to: HAQEGESPVVIAKSWPPVPWPKT*KSCSTS
Trigger: GCTCGTACTACATGATTTCCAGGTCTTTGGCCATGG...AACTGGAGGCCACGATTTCGCTATTACCACTGGACTCTCTCCTTCCTGGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202136.2
CDS-3UTR TCA 90 bp CATGCCCAGGAAGGAGAGAGTCCAGTGGTAATAGCGAAATCGTGGCCTCCAGTTTACAGGAGCAGCAAATaGAGACCATACAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: HAQEGESPVVIAKSWPPVYRSSK*RPYRRT
Trigger: AGTCCTTCTGTATGGTCTTCATTTGCTGCTCCTGTA...AACTGGAGGCCACGATTTCGCTATTACCACTGGACTCTCTCCTTCCTGGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202136.2
CDS-3UTR TCA 90 bp CAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCCTACATAGCGTGCTGCACTaGGAGACAGGCCTCGGATTC +
Preference number: 4 (lower is better)
Translates to: QYRVGMRNTETLKLKAGLHSVLH*ETGLGF
Trigger: GAATCCGAGGCCTGTCTCTCAGTGCAGCACGCTATG...TAGGCCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp ACAGTAAAGGAGAGAACTGACCCTCTCCTTTGCGTATTGGCACAAAGAACACAACATAGCGTGCTGCACTaGGAGACAGGCCTCGGATTC +
Preference number: 4 (lower is better)
Translates to: TVKERTDPLLCVLAQRTQHSVLH*ETGLGF
Trigger: GAATCCGAGGCCTGTCTCTCAGTGCAGCACGCTATG...TTGTGTTCTTTGTGCCAATACGCAAAGGAGAGGGTCAGTTCTCTCCTTTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp ACAGTAAAGGAGAGAACTGACCCTCTCCTTTGCGTATTGGCACAAAGAACACAATGCCATCGTACTCTCTaGCCTTCTCCGTGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: TVKERTDPLLCVLAQRTQCHRTL*PSPCPC
Trigger: GCACGGACACGGAGAAGGGCAGAGAGTACGATGGCA...TTGTGTTCTTTGTGCCAATACGCAAAGGAGAGGGTCAGTTCTCTCCTTTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR GCA 90 bp CATGCCCAGGAAGGAGAGAGTCCAGTGGTAATAGCGAAATCGTGGCCTCCAGTTACCATTGGTTGCGATTaGACTCATGGAAATGGCTGT +
Preference number: 4 (lower is better)
Translates to: HAQEGESPVVIAKSWPPVTIGCD*THGNGC
Trigger: ACAGCCATTTCCATGAGTGCAATCGCAACCAATGGT...AACTGGAGGCCACGATTTCGCTATTACCACTGGACTCTCTCCTTCCTGGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202136.2
CDS-3UTR GCA 90 bp TTGCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACGTCCTCAGCAGCGTCTaGACCGCACAAGCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LRIGTKNTRSIPSRDAKYVLSSV*TAQAKF
Trigger: GAACTTGGCTTGTGCGGTGCAGACGCTGCTGAGGAC...GTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp ACAGTAAAGGAGAGAACTGACCCTCTCCTTTGCGTATTGGCACAAAGAACACAAGGTTGTCCAGAAAGGTaGCCTCAAGGACGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TVKERTDPLLCVLAQRTQGCPER*PQGRSP
Trigger: TGGGCTCCGTCCTTGAGGGCACCTTTCTGGACAACC...TTGTGTTCTTTGTGCCAATACGCAAAGGAGAGGGTCAGTTCTCTCCTTTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp GTAAAGGAGAGAACTGACCCTCTCCTTTGCGTATTGGCACAAAGAACACAAGATCCTGATAGACTCCTCTaGCCGCTGAGCCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: VKERTDPLLCVLAQRTQDPDRLL*PLSLWM
Trigger: CATCCACAGGCTCAGCGGGCAGAGGAGTCTATCAGG...ATCTTGTGTTCTTTGTGCCAATACGCAAAGGAGAGGGTCAGTTCTCTCCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp ATTGCCCTGCACATAGGTCTGCTGAAACAGAAGCGACACTCTTCTCACTACCAGGAAGATGGCCATAGCTaGGAAGAGATAAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: IALHIGLLKQKRHSSHYQEDGHS*EEISQQ
Trigger: CTGCTGGCTTATCTCTTCCCAGCTATGGCCATCTTC...CTGGTAGTGAGAAGAGTGTCGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp TCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACATAGGTCTGCAGACATCAAAGCCATaGCGAGACAGCGTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: SPIYKGFGLHCIALHIGLQTSKP*RDSVRF
Trigger: GAACCGCACGCTGTCTCGCCATGGCTTTGATGTCTG...CAGACCTATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp TCAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCCTATCGTGGCCTCCAGTTaGGTGTCCTCAGCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: SIPSRDAKYRNTKIKGRPIVASS*VSSAAS
Trigger: AGACGCTGCTGAGGACACCCAACTGGAGGCCACGAT...AGGCCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp GTAAAGGAGAGAACTGACCCTCTCCTTTGCGTATTGGCACAAAGAACACAAGATACCAGCACCAGCAGCTaGGGCCTCCAGTTCTTCGTA +
Preference number: 4 (lower is better)
Translates to: VKERTDPLLCVLAQRTQDTSTSS*GLQFFV
Trigger: TACGAAGAACTGGAGGCCCCAGCTGCTGGTGCTGGT...ATCTTGTGTTCTTTGTGCCAATACGCAAAGGAGAGGGTCAGTTCTCTCCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp TGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACATCACCATCACGCAGGTTaGAGGAGATCACTACCTGGC +
Preference number: 4 (lower is better)
Translates to: CNLSYLQGFWTALHCPAHHHHAG*RRSLPG
Trigger: GCCAGGTAGTGATCTCCTCCAACCTGCGTGATGGTG...ATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp GATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCTTCCTCCAGACCTTGTaGTGTCGCAGCAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: DLACNLSYLQGFWTALHCFLQTL*CRSRKG
Trigger: GCCCTTCCTGCTGCGACACCACAAGGTCTGGAGGAA...GCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp ACAGTAAAGGAGAGAACTGACCCTCTCCTTTGCGTATTGGCACAAAGAACACAAGGAGCACTCTGGTCATaGATCAGCTGCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TVKERTDPLLCVLAQRTQGALWS*ISCTSS
Trigger: GGAGGAGGTGCAGCTGATCCATGACCAGAGTGCTCC...TTGTGTTCTTTGTGCCAATACGCAAAGGAGAGGGTCAGTTCTCTCCTTTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp ATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACGGTAAGATGCACCTCTaGGTCTGTCTCCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: IGTKNTRSIPSRDAKYRNGKMHL*VCLPLP
Trigger: GGGGAGAGGGAGACAGACCCAGAGGTGCATCTTACC...GTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CAA 72 bp TGTTGTGGGCTGTTTTCATCAACGGAAACTTTGCTCTaGCCAACCAGAGTCTGGGCCCAGGTCATGCAACTT +
Preference number: 4 (lower is better)
Translates to: CCGLFSSTETLL*PTRVWAQVMQL
Trigger: AAGTTGCATGACCTGGGCCCAGACTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAAACAGCCCACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp TCCTTTGCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAATCATGGAAATGGCTGTaGGCATCGTACAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SFAYWHKEHKINTESGCESWKWL*ASYRSS
Trigger: GCTGCTCCTGTACGATGCTCACAGCCATTTCCATGA...TTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGCAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR TCA 90 bp CGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCCTAATAATACGGTGGCCATGCAGGTaGGCACACAGGTGCCATACA +
Preference number: 4 (lower is better)
Translates to: RVGMRNTETLKLKAGLIIRWPCR*AHRCHT
Trigger: TGTATGGCACCTGTGTGCTCACCTGCATGGCCACCG...TATTATTAGGCCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp CTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACCATGATCCCTGTGACTaGGGGGAAGTAGATACCAAC +
Preference number: 4 (lower is better)
Translates to: LATSPIYKGFGLHCIALHHDPCD*GEVDTN
Trigger: GTTGGTATCTACTTCCCCTCAGTCACAGGGATCATG...GTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp AGATCAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGTGCCATCGTACTCTCTaGCCTTCTCCGTGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: RSIPSRDAKYRNTKIKGRCHRTL*PSPCPC
Trigger: GCACGGACACGGAGAAGGGCAGAGAGTACGATGGCA...CCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR GCA 90 bp GATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCATGGCCAAAGACCTaGAGGAAGGGCACTATGCCA +
Preference number: 4 (lower is better)
Translates to: DLACNLSYLQGFWTALHCPWPKT*RKGTMP
Trigger: TGGCATAGTGCCCTTCCTGCAGGTCTTTGGCCATGG...GCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp ATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACATCACCCGGTCCAGTTaGTCAGTGAGGACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: IGTKNTRSIPSRDAKYRNITRSS*SVRTSK
Trigger: CTTGGAGGTCCTCACTGAGCAACTGGACCGGGTGAT...GTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp GCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGCAGGCACAACACCATTaGTTGCGATTGCACTCATGG +
Preference number: 4 (lower is better)
Translates to: AYWHKEHKINTESGCEIPQAQHH*LRLHSW
Trigger: CCATGAGTGCAATCGCAACCAATGGTGTTGTGCCTG...CGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR CCA 90 bp ATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACCAGACATCAAAGCCATaGCGAGACAGCGTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: IGTKNTRSIPSRDAKYRNQTSKP*RDSVRF
Trigger: GAACCGCACGCTGTCTCGCCATGGCTTTGATGTCTG...GTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp GCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGCTTCCCAAGCCAGCTTaGCACAGACATCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: AYWHKEHKINTESGCEIPLPKPA*HRHQSH
Trigger: ATGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAG...CGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp ATTGCCCTGCACATAGGTCTGCTGAAACAGAAGCGACACTCTTCTCACTACCAGGCACCAGGAATGCCCTaGATCTCTGTGACATTGTTT +
Preference number: 4 (lower is better)
Translates to: IALHIGLLKQKRHSSHYQAPGMP*ISVTLF
Trigger: AAACAATGTCACAGAGATCCAGGGCATTCCTGGTGC...CTGGTAGTGAGAAGAGTGTCGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp GTAAAGGAGAGAACTGACCCTCTCCTTTGCGTATTGGCACAAAGAACACAAGATGTAGGGATAGACTTCTaGGCATCCCGCAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VKERTDPLLCVLAQRTQDVGIDF*ASRRSP
Trigger: TGGAGACCTGCGGGATGCCCAGAAGTCTATCCCTAC...ATCTTGTGTTCTTTGTGCCAATACGCAAAGGAGAGGGTCAGTTCTCTCCTTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp AAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAATTCTCCTCCCCTGGAGATaGCGAGCTGCTAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KNTRSIPSRDAKYRNTKILLPWR*RAARAA
Trigger: AGCTGCCCTAGCAGCTCGCCATCTCCAGGGGAGGAG...AATTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp CAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCCTACCCGGACCAGTTCGATaGAGTTCCTCCATGTCTGAT +
Preference number: 4 (lower is better)
Translates to: QYRVGMRNTETLKLKAGLPGPVR*SSSMSD
Trigger: ATCAGACATGGAGGAACTTCATCGAACTGGTCCGGG...TAGGCCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp CTCTCCTTTGCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCATTCTTCTCTGCCACTaGCTTATCCTTGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSFAYWHKEHKINTESGCILLCH*LILGPG
Trigger: ACCTGGACCAAGGATAAGTCAGTGGCAGAGAAGAAT...GCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGCAAAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp GTAAAGGAGAGAACTGACCCTCTCCTTTGCGTATTGGCACAAAGAACACAAGATGGTCCAGTTGCTCAGTaGGGACCTCCAAGAATTCCA +
Preference number: 4 (lower is better)
Translates to: VKERTDPLLCVLAQRTQDGPVAQ*GPPRIP
Trigger: TGGAATTCTTGGAGGTCCTCACTGAGCAACTGGACC...ATCTTGTGTTCTTTGTGCCAATACGCAAAGGAGAGGGTCAGTTCTCTCCTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp TTGCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACGGTCCAGTTGCTCAGTaGGGACCTCCAAGAATTCCA +
Preference number: 4 (lower is better)
Translates to: LRIGTKNTRSIPSRDAKYGPVAQ*GPPRIP
Trigger: TGGAATTCTTGGAGGTCCTCACTGAGCAACTGGACC...GTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp TTGCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCCCACTGGCATCTTCTaGCTTGAAGATGGCCATAGC +
Preference number: 4 (lower is better)
Translates to: LRIGTKNTRSIPSRDAKYPTGIF*LEDGHS
Trigger: GCTATGGCCATCTTCAAGGCAGAAGATGCCAGTGGG...GTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp ATACTCTTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATGAGAGCATAGCGTGCTaGACTGAGAGACAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: ILLIWLATSPIYKGFGLHESIAC*TERQAS
Trigger: CGAGGCCTGTCTCTCAGTGCAGCACGCTATGCTCTC...ATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAAGAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp AGATCAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGTGGTCATGGATCAGCTaGACCTCCTCCTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RSIPSRDAKYRNTKIKGRWSWIS*TSSSGF
Trigger: GAAGCCAGAGGAGGAGGTGCAGCTGATCCATGACCA...CCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp TGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACATGATCGGGAAATTGGGTaGGTCGAAGGCAGACTTGAT +
Preference number: 4 (lower is better)
Translates to: CNLSYLQGFWTALHCPAHDREIG*VEGRLD
Trigger: ATCAAGTCTGCCTTCGACCCACCCAATTTCCCGATC...ATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp TCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACATAGGTCTGCTTCCCAAGCCAGCTTaGCACAGACATCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: SPIYKGFGLHCIALHIGLLPKPA*HRHQSH
Trigger: ATGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAG...CAGACCTATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp GCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGGCACCAGGAATGCCCTaGATCTCTGTGACATTGTTT +
Preference number: 4 (lower is better)
Translates to: AYWHKEHKINTESGCEIPAPGMP*ISVTLF
Trigger: AAACAATGTCACAGAGATCCAGGGCATTCCTGGTGC...CGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp CGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCCTAATAATATTCCTCCAGACCTTGTaGTGTCGCAGCAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RVGMRNTETLKLKAGLIIFLQTL*CRSRKG
Trigger: GCCCTTCCTGCTGCGACACCACAAGGTCTGGAGGAA...TATTATTAGGCCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp AGATCAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCTGTTATCGTCCATCTaGGCCACGGTGAAGATCCGC +
Preference number: 4 (lower is better)
Translates to: RSIPSRDAKYRNTKIKGRLLSSI*ATVKIR
Trigger: GCGGATCTTCACCGTGGCCCAGATGGACGATAACAG...CCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp ATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCTACCAACGAGCAGGGTaGAGTAGGAGGTCATATCAC +
Preference number: 4 (lower is better)
Translates to: IWLATSPIYKGFGLHCIAYQRAG*SRRSYH
Trigger: GTGATATGACCTCCTACTTCACCCTGCTCGTTGGTA...GGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp ATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCATGATCCCTGTGACTaGGGGGAAGTAGATACCAAC +
Preference number: 4 (lower is better)
Translates to: IWLATSPIYKGFGLHCIAHDPCD*GEVDTN
Trigger: GTTGGTATCTACTTCCCCTCAGTCACAGGGATCATG...GGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp TGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACACATTCTTCTCTGCCACTaGCTTATCCTTGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: WHKEHKINTESGCEIPKHILLCH*LILGPG
Trigger: ACCTGGACCAAGGATAAGTCAGTGGCAGAGAAGAAT...GTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp GATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCGAGATTTATTCACGATaGCCTCGTTCAGCCGCACAG +
Preference number: 4 (lower is better)
Translates to: DLACNLSYLQGFWTALHCEIYSR*PRSAAQ
Trigger: CTGTGCGGCTGAACGAGGTCATCGTGAATAAATCTC...GCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp TTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCACAGCTGTGTGCATaGGCCGTACATTGGACTGGT +
Preference number: 4 (lower is better)
Translates to: LIWLATSPIYKGFGLHCIAQLCA*AVHWTG
Trigger: ACCAGTCCAATGTACGGCGCATGCACACAGCTGTGC...AATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp CAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAAATCACCCGGTCCAGTTaGTCAGTGAGGACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: QRTQDQYRVGMRNTETLKITRSS*SVRTSK
Trigger: CTTGGAGGTCCTCACTGAGCAACTGGACCGGGTGAT...TTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp GATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCAGGCACAACACCATTaGTTGCGATTGCACTCATGG +
Preference number: 4 (lower is better)
Translates to: DLACNLSYLQGFWTALHCQAQHH*LRLHSW
Trigger: CCATGAGTGCAATCGCAACCAATGGTGTTGTGCCTG...GCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR CCA 90 bp TTGCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCAGGCACAACACCATTaGTTGCGATTGCACTCATGG +
Preference number: 4 (lower is better)
Translates to: LRIGTKNTRSIPSRDAKYQAQHH*LRLHSW
Trigger: CCATGAGTGCAATCGCAACCAATGGTGTTGTGCCTG...GTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR CCA 90 bp CGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCCTAATAATAGTAGGGATAGACTTCTaGGCATCCCGCAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RVGMRNTETLKLKAGLIIVGIDF*ASRRSP
Trigger: TGGAGACCTGCGGGATGCCCAGAAGTCTATCCCTAC...TATTATTAGGCCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CAA 72 bp ACAGTAAAGGAGAGAACTGACCCTCTCCTTTGCGTATaGGCACAAAGAACACAAGATCAATACCGAGTCGGG +
Preference number: 4 (lower is better)
Translates to: TVKERTDPLLCV*AQRTQDQYRVG
Trigger: CCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGCAAAGGAGAGGGTCAGTTCTCTCCTTTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR TCA 90 bp ATACTCTTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTCATGGAAATGGCTGTaGGCATCGTACAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ILLIWLATSPIYKGFGLHSWKWL*ASYRSS
Trigger: GCTGCTCCTGTACGATGCTCACAGCCATTTCCATGA...ATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAAGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR CCA 90 bp AGATCAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGGAAGATGGCCATAGCTaGGAAGAGATAAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RSIPSRDAKYRNTKIKGREDGHS*EEISQQ
Trigger: CTGCTGGCTTATCTCTTCCCAGCTATGGCCATCTTC...CCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp AAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAATTCGGAGGAGACGGGACTaGGGCCTTTATTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KNTRSIPSRDAKYRNTKIRRRRD*GLYSSL
Trigger: CAGAGAAGAATAAAGGCCCCAGTCCCGTCTCCTCCG...AATTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
3UTR CAA 72 bp TGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATaGCATTGCCCTGCACATAGGTCTGCTGAAACAGAA +
Preference number: 4 (lower is better)
Translates to: CNLSYLQGFWTA*HCPAHRSAETE
Trigger: TTCTGTTTCAGCAGACCTATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR TCA 90 bp AGCTACAGTGATTATAGAGGTGACTTGAACGACACAAGGTTCATAACAAATATTTACAGAAGGACTCCATaGTGCCCGCGATGCCCACCA +
Preference number: 4 (lower is better)
Translates to: SYSDYRGDLNDTRFITNIYRRTP*CPRCPP
Trigger: TGGTGGGCATCGCGGGCATCATGGAGTCCTTCTGTA...AATATTTGTTATGAACCTTGTGTCGTTCAAGTCACCTCTATAATCACTGTAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR TCA 90 bp TCAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCCTTACAGGAGCAGCAAATaGAGACCATACAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: SIPSRDAKYRNTKIKGRPYRSSK*RPYRRT
Trigger: AGTCCTTCTGTATGGTCTTCATTTGCTGCTCCTGTA...AGGCCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR GCA 90 bp GTAAAGGAGAGAACTGACCCTCTCCTTTGCGTATTGGCACAAAGAACACAAGATACCATTGGTTGCGATTaGACTCATGGAAATGGCTGT +
Preference number: 4 (lower is better)
Translates to: VKERTDPLLCVLAQRTQDTIGCD*THGNGC
Trigger: ACAGCCATTTCCATGAGTGCAATCGCAACCAATGGT...ATCTTGTGTTCTTTGTGCCAATACGCAAAGGAGAGGGTCAGTTCTCTCCTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR GCA 90 bp ATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCACCATTGGTTGCGATTaGACTCATGGAAATGGCTGT +
Preference number: 4 (lower is better)
Translates to: IWLATSPIYKGFGLHCIATIGCD*THGNGC
Trigger: ACAGCCATTTCCATGAGTGCAATCGCAACCAATGGT...GGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR GCA 90 bp ATAAATACTCTTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTCAAGAGAGCATAGCGTaGTGCACTGAGAGACAGGCC +
Preference number: 4 (lower is better)
Translates to: INTLDLACNLSYLQGFWTQESIA*CTERQA
Trigger: GGCCTGTCTCTCAGTGCAGCACGCTATGCTCTCTTG...AGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAAGAGTATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp CGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCCTAATAATACTTCTCGTAGGTGTATaGCGAGATGTCGCTCTCATG +
Preference number: 4 (lower is better)
Translates to: RVGMRNTETLKLKAGLIILLVGV*RDVALM
Trigger: CATGAGAGCGACATCTCGGCATACACCTACGAGAAG...TATTATTAGGCCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp ACAGTAAAGGAGAGAACTGACCCTCTCCTTTGCGTATTGGCACAAAGAACACAACATCAACGGAAACTTTaGTCTTGCCAACCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: TVKERTDPLLCVLAQRTQHQRKL*SCQPES
Trigger: AGACTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATG...TTGTGTTCTTTGTGCCAATACGCAAAGGAGAGGGTCAGTTCTCTCCTTTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202479.4
CDS-3UTR CCA 90 bp TTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGATCGGGAAATTGGGTaGGTCGAAGGCAGACTTGAT +
Preference number: 4 (lower is better)
Translates to: LIWLATSPIYKGFGLHCIDREIG*VEGRLD
Trigger: ATCAAGTCTGCCTTCGACCCACCCAATTTCCCGATC...AATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp TTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTCCATTAGCTTTGCCATaGCCAAAGACCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LIWLATSPIYKGFGLHCIPLALP*PKTCRK
Trigger: CTTCCTGCAGGTCTTTGGCCATGGCAAAGCTAATGG...AATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp GCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACATAAGAGTAGAAGTCACCTaGATGGACATGGAACATCTA +
Preference number: 4 (lower is better)
Translates to: ATSPIYKGFGLHCIALHIRVEVT*MDMEHL
Trigger: TAGATGTTCCATGTCCATCCAGGTGACTTCTACTCT...TATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202479.4
CDS-3UTR GCA 90 bp CTTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATCGGAAACTTTGCTCTTaGCAACCAGAGTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LDLACNLSYLQGFWTALHRKLCS*QPESGN
Trigger: ATTTCCAGACTCTGGTTGGCAAGAGCAAAGTTTCCG...ATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202479.4
CDS-3UTR GCA 90 bp ATTGCCCTGCACATAGGTCTGCTGAAACAGAAGCGACACTCTTCTCACTACCAGGTTCATAACAAATATTaGACATGGAGCACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: IALHIGLLKQKRHSSHYQVHNKY*TWSTEN
Trigger: GTTTTCTGTGCTCCATGTGCAATATTTGTTATGAAC...CTGGTAGTGAGAAGAGTGTCGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202479.4
CDS-3UTR TCA 90 bp ATACTCTTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTACAGGAGCAGCAAATaGAGACCATACAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: ILLIWLATSPIYKGFGLHYRSSK*RPYRRT
Trigger: AGTCCTTCTGTATGGTCTTCATTTGCTGCTCCTGTA...ATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAAGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR TCA 90 bp AGCTACAGTGATTATAGAGGTGACTTGAACGACACAAGGTTCATAACAAATATTTCATGGAAATGGCTGTaGGCATCGTACAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SYSDYRGDLNDTRFITNISWKWL*ASYRSS
Trigger: GCTGCTCCTGTACGATGCTCACAGCCATTTCCATGA...AATATTTGTTATGAACCTTGTGTCGTTCAAGTCACCTCTATAATCACTGTAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR GCA 90 bp ATACTCTTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTTTTCTGCTTCTTCATaGTCTCTACTTCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ILLIWLATSPIYKGFGLHFSASS*SLLPWG
Trigger: ACCCCAGGGAAGTAGAGAGCATGAAGAAGCAGAAAA...ATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAAGAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR CCA 90 bp CAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAATTGCCAACCAGAGTCTaGAAATCATGTAGTACGAGC +
Preference number: 4 (lower is better)
Translates to: QRTQDQYRVGMRNTETLKLPTRV*KSCSTS
Trigger: GCTCGTACTACATGATTTCCAGACTCTGGTTGGCAA...TTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202479.4
CDS-3UTR TCA 90 bp CGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCCTAATAATAATCTGTTTGAGGATCTaGGATCGTTGCTCCATTACT +
Preference number: 4 (lower is better)
Translates to: RVGMRNTETLKLKAGLIIICLRI*DRCSIT
Trigger: AGTAATGGAGCAACGATCTCAGATCCTCAAACAGAT...TATTATTAGGCCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CCA 90 bp ATAAATACTCTTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTAACAAATATTGCACATaGAGCACAGAAAACTGGGGG +
Preference number: 4 (lower is better)
Translates to: INTLDLACNLSYLQGFWTNKYCT*STENWG
Trigger: CCCCCAGTTTTCTGTGCTCCATGTGCAATATTTGTT...AGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAAGAGTATTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202479.4
3UTR CAA 72 bp CATGGAACATCTAGCTACAGTGATTATAGAGGTGACTaGAACGACACAAGGTTCATAACAAATATTGCACAT +
Preference number: 4 (lower is better)
Translates to: HGTSSYSDYRGD*NDTRFITNIAH
Trigger: ATGTGCAATATTTGTTATGAACCTTGTGTCGTTCAAGTCACCTCTATAATCACTGTAGCTAGATGTTCCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS GCA 90 bp CCTTTGACGTCTTCCCTCGGGAGCCGGCGGGGATCGGCCACCGAATaGCGGCGGGACTCTGGGTCAGCGGAGGCGGCGGACGCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: PLTSSLGSRRGSATE*RRDSGSAEAADAAG
Trigger: CCCCGCAGCGTCCGCCGCCTCCGCTGACCCAGAGTCCCGCCGGCATTCGGTGGCCGATCCCCGCCGGCTCCCGAGGGAAGACGTCAAAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000125867.2
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS-3UTR CAA 90 bp CCACGCCTCCTCGCCACCTTTATTGCAACGTCTGCTCCGGCGGGGCGAGGCCAGTTGCCATCACCGGGGTaGGCTCCCCCATCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: PRLLATFIATSAPAGRGQLPSPG*APPSPS
Trigger: GGACGGCGATGGGGGAGCCAACCCCGGTGATGGCAA...CTGGCCTCGCCCCGCCGGAGCAGACGTTGCAATAAAGGTGGCGAGGAGGCGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000099092.8
CDS-3UTR CAA 90 bp CTCGGGGCTGCCCGGCGCGGGACCACGGTTCCGCTCCTCTCCACGCCTCCTCGCTCCGTGTCCGTGCTGTaGATGAAGGGACTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: LGAARRGTTVPLLSTPPRSVSVL*MKGLLS
Trigger: AGAGAGCAGTCCCTTCATCAACAGCACGGACACGGA...GCGAGGAGGCGTGGAGAGGAGCGGAACCGTGGTCCCGCGCCGGGCAGCCCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp GCCTGCTCCTCCACGAAGGCACCGGGCAGGACTTCCTCGGTGGGCACGGGCCTCTGCATGCGCCGTACATaGGACTGGTTCGGCTTCATG +
Preference number: 5 (lower is better)
Translates to: ACSSTKAPGRTSSVGTGLCMRRT*DWFGFM
Trigger: CATGAAGCCGAACCAGTCCAATGTACGGCGCATGCA...GAGGCCCGTGCCCACCGAGGAAGTCCTGCCCGGTGCCTTCGTGGAGGAGCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp GGCCAGGGCCCTGGGGCTGGAGGCACTGTACCCAGTCCCAGAGGGCGCTTAAAGCTGGCATCTTCTGCCTaGAAGATGGCCATAGCTGGG +
Preference number: 5 (lower is better)
Translates to: GQGPGAGGTVPSPRGRLKLASSA*KMAIAG
Trigger: CCCAGCTATGGCCATCTTCAAGGCAGAAGATGCCAG...CTTTAAGCGCCCTCTGGGACTGGGTACAGTGCCTCCAGCCCCAGGGCCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp CAGTCTTTGGCGAGGAGCCACGGGACAGGGGGAGCAGGCGGCAAGCCAAGAGAGAGGCAGATCGGGAAATaGGGTGGGTCGAAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: QSLARSHGTGGAGGKPRERQIGK*GGSKAD
Trigger: GTCTGCCTTCGACCCACCCAATTTCCCGATCTGCCT...CTCTCTTGGCTTGCCGCCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp CGAATTCAGTCTTTGGCGAGGAGCCACGGGACAGGGGGAGCAGGCGGCAAGCCAAATCGTGGCCTCCAGTaGGGTGTCCTCAGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: RIQSLARSHGTGGAGGKPNRGLQ*GVLSSV
Trigger: GACGCTGCTGAGGACACCCAACTGGAGGCCACGATT...TGGCTTGCCGCCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTGAATTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp GCTCCACGAATTCAGTCTTTGGCGAGGAGCCACGGGACAGGGGGAGCAGGCGGCCATCACCCGGTCCAGTaGCTCAGTGAGGACCTCCAA +
Preference number: 5 (lower is better)
Translates to: APRIQSLARSHGTGGAGGHHPVQ*LSEDLQ
Trigger: TTGGAGGTCCTCACTGAGCAACTGGACCGGGTGATG...GCCGCCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp GCCACCTTTATTGCAACGTCTGCTCCGGCGGGGCGAGGCCAGGCTCAGAAAAGGTCATCACAGGTGGCATaGAGGAGGCGGGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: ATFIATSAPAGRGQAQKRSSQVA*RRREEQ
Trigger: CTGCTCCTCCCGCCTCCTCAATGCCACCTGTGATGA...CCTTTTCTGAGCCTGGCCTCGCCCCGCCGGAGCAGACGTTGCAATAAAGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp GCTCCACGAATTCAGTCTTTGGCGAGGAGCCACGGGACAGGGGGAGCAGGCGGCGGCTCTCCATTAGCTTaGCCATGGCCAAAGACCTGC +
Preference number: 5 (lower is better)
Translates to: APRIQSLARSHGTGGAGGGSPLA*PWPKTC
Trigger: GCAGGTCTTTGGCCATGGCAAAGCTAATGGAGAGCC...GCCGCCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp TGTACACTATGTATAGCGCGACCGAGCGGCACCCGGGCTCGGCGACCAGGGTCCCATTTCCTCCAGACCTaGTGGTGTCGCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: CTLCIARPSGTRARRPGSHFLQT*WCRSRK
Trigger: CTTCCTGCTGCGACACCACAAGGTCTGGAGGAAATG...GGACCCTGGTCGCCGAGCCCGGGTGCCGCTCGGTCGCGCTATACATAGTGTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp AGAGGCTGTGCGAGGCCTCCTGGTGAGTCGGCCCCAAGGCTGACATTGGCCCCTCGTTCCCGCTCGTTCTaGGTGAGGTGCATCTGTTTG +
Preference number: 5 (lower is better)
Translates to: RGCARPPGESAPRLTLAPRSRSF*VRCICL
Trigger: CAAACAGATGCACCTCACCAAGAACGAGCGGGAACG...AGGGGCCAATGTCAGCCTTGGGGCCGACTCACCAGGAGGCCTCGCACAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp GAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTTGGCGAGGAGCCACGGGACGGGTTGCCATCACCTTaGACGTCTTCCCTCGGGAGC +
Preference number: 5 (lower is better)
Translates to: EGVPSSSTNSVFGEEPRDGLPSP*TSSLGS
Trigger: GCTCCCGAGGGAAGACGTCAAAGGTGATGGCAACCC...GTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202223.4
CDS GCA 90 bp ATCACTGAAGACATAGGGGTGGTCCATGTCTACGGGGGTACCGTCTaGCAGGCCCACAGAGGGCATCCCACGCCTCTCGACAATCACCCC +
Preference number: 5 (lower is better)
Translates to: ITEDIGVVHVYGGTV*QAHRGHPTPLDNHP
Trigger: GGGGTGATTGTCGAGAGGCGTGGGATGCCCTCTGTGGGCCTGGCAGACGGTACCCCCGTAGACATGGACCACCCCTATGTCTTCAGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CCA 90 bp ACACGCTGTCTCTTCGGGAACATTGAGGCGGAGCCGGGGGTTGGCTaGATTCTTCCTCCGAATGGAGCCCCGAGACTCGTCTGTGATGCT +
Preference number: 5 (lower is better)
Translates to: TRCLFGNIEAEPGVG*ILPPNGAPRLVCDA
Trigger: AGCATCACAGACGAGTCTCGGGGCTCCATTCGGAGGAAGAATCCAGCCAACCCCCGGCTCCGCCTCAATGTTCCCGAAGAGACAGCGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS-3UTR CAA 90 bp CATGCCCAGGAAGGAGAGAGTCCAGTGGTAATAGCGAAATCGTGGCCTCCAGTTTTGCCATCACCGGGGTaGGCTCCCCCATCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: HAQEGESPVVIAKSWPPVLPSPG*APPSPS
Trigger: GGACGGCGATGGGGGAGCCAACCCCGGTGATGGCAA...AACTGGAGGCCACGATTTCGCTATTACCACTGGACTCTCTCCTTCCTGGGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000202136.2
CDS-3UTR CAA 90 bp GAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTTGGCGAGGAGCCACGGGACACACCATCACGCAGGTaGGAGGAGATCACTACCTGG +
Preference number: 5 (lower is better)
Translates to: EGVPSSSTNSVFGEEPRDTPSRR*EEITTW
Trigger: CCAGGTAGTGATCTCCTCCAACCTGCGTGATGGTGT...GTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp TCCAGCTCCACGAATTCAGTCTTTGGCGAGGAGCCACGGGACAGGGGGAGCAGGCGTTCCCGCTCGTTCTaGGTGAGGTGCATCTGTTTG +
Preference number: 5 (lower is better)
Translates to: SSSTNSVFGEEPRDRGSRRSRSF*VRCICL
Trigger: CAAACAGATGCACCTCACCAAGAACGAGCGGGAACG...CCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS TCA 90 bp CCTCTGGCTTCTCCTCATTGTCACACGCTGTCTCTTCGGGAACATTaGGGCGGAGCCGGGGGTTGGCTGGATTCTTCCTCCGAATGGAGC +
Preference number: 5 (lower is better)
Translates to: PLASPHCHTLSLREH*GGAGGWLDSSSEWS
Trigger: GCTCCATTCGGAGGAAGAATCCAGCCAACCCCCGGCTCCGCCTCAATGTTCCCGAAGAGACAGCGTGTGACAATGAGGAGAAGCCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS TCA 90 bp CTCGGCCGCCACCGCGGACCAGCATCACCCGGTCCAGTTGCTCAGTaGGGACCTCCAAGAATTCCATGTAGTTTTCATCCCCATTGCGGT +
Preference number: 5 (lower is better)
Translates to: LGRHRGPASPGPVAQ*GPPRIPCSFHPHCG
Trigger: ACCGCAATGGGGATGAAAACTACATGGAATTCTTGGAGGTCCTCACTGAGCAACTGGACCGGGTGATGCTGGTCCGCGGTGGCGGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS-3UTR CAA 90 bp GGACTGCATTGCATTGCCCTGCACATAGGTCTGCTGAAACAGAAGCGACACTCTTTGCCATCACCGGGGTaGGCTCCCCCATCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: GLHCIALHIGLLKQKRHSLPSPG*APPSPS
Trigger: GGACGGCGATGGGGGAGCCAACCCCGGTGATGGCAA...AGAGTGTCGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAATGCAATGCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202479.4
CDS-3UTR CAA 90 bp GAAAAAGAGGTGGTGAGGTCAGCTAGTGGTCCTGGCCCTGGAGTGAGCATGATGAAGGGACTGCTCTCTTaGGGGTTGCCATCACCGGGG +
Preference number: 5 (lower is better)
Translates to: EKEVVRSASGPGPGVSMMKGLLS*GLPSPG
Trigger: CCCCGGTGATGGCAACCCCAAAGAGAGCAGTCCCTT...CATCATGCTCACTCCAGGGCCAGGACCACTAGCTGACCTCACCACCTCTTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099092.8
CDS-3UTR CAA 90 bp GCTCCACGAATTCAGTCTTTGGCGAGGAGCCACGGGACAGGGGGAGCAGGCGGCAACTTGTTGACGTACTaGACACCCACAAAGACAACG +
Preference number: 5 (lower is better)
Translates to: APRIQSLARSHGTGGAGGNLLTY*TPTKTT
Trigger: CGTTGTCTTTGTGGGTGTCAAGTACGTCAACAAGTT...GCCGCCTGCTCCCCCTGTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp GAAGGAAACTGGGGAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTTGGCGAAGGCAGATCGGGAAATaGGGTGGGTCGAAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: EGNWGGCALQLHEFSLWRRQIGK*GGSKAD
Trigger: GTCTGCCTTCGACCCACCCAATTTCCCGATCTGCCT...TCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTCCCCAGTTTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp GGCCAGGGCCCTGGGGCTGGAGGCACTGTACCCAGTCCCAGAGGGCGCTTAAAGTTGAGCAAAACTAGCTaGGCATCCCGAGATTTATTC +
Preference number: 5 (lower is better)
Translates to: GQGPGAGGTVPSPRGRLKLSKTS*ASRDLF
Trigger: GAATAAATCTCGGGATGCCAAGCTAGTTTTGCTCAA...CTTTAAGCGCCCTCTGGGACTGGGTACAGTGCCTCCAGCCCCAGGGCCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp CCACGCCTCCTCGCCACCTTTATTGCAACGTCTGCTCCGGCGGGGCGAGGCCAGTTGAGCAAAACTAGCTaGGCATCCCGAGATTTATTC +
Preference number: 5 (lower is better)
Translates to: PRLLATFIATSAPAGRGQLSKTS*ASRDLF
Trigger: GAATAAATCTCGGGATGCCAAGCTAGTTTTGCTCAA...CTGGCCTCGCCCCGCCGGAGCAGACGTTGCAATAAAGGTGGCGAGGAGGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS TCA 90 bp GCCCTCGGAGGAGACGGGACTGGGGCCTTTATTCTTCTCTGCCACTaGCTTATCCTTGGTCCAGGTAAGATGCACCTCTGGGTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: ALGGDGTGAFILLCH*LILGPGKMHLWVCL
Trigger: GAGACAGACCCAGAGGTGCATCTTACCTGGACCAAGGATAAGTCAGTGGCAGAGAAGAATAAAGGCCCCAGTCCCGTCTCCTCCGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CCA 90 bp GGCCGCCTCCCCACTGGCATCTTCTGCCTTGAAGATGGCCATAGCTaGGAAGAGATAAGCCAGCAGGATCTCGATCGTGCCAAGGATGTA +
Preference number: 5 (lower is better)
Translates to: GRLPTGIFCLEDGHS*EEISQQDLDRAKDV
Trigger: TACATCCTTGGCACGATCGAGATCCTGCTGGCTTATCTCTTCCCAGCTATGGCCATCTTCAAGGCAGAAGATGCCAGTGGGGAGGCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS-3UTR CAA 90 bp CATGCCCAGGAAGGAGAGAGTCCAGTGGTAATAGCGAAATCGTGGCCTCCAGTTAAGGGACTGCTCTCTTaGGGGTTGCCATCACCGGGG +
Preference number: 5 (lower is better)
Translates to: HAQEGESPVVIAKSWPPVKGLLS*GLPSPG
Trigger: CCCCGGTGATGGCAACCCCAAAGAGAGCAGTCCCTT...AACTGGAGGCCACGATTTCGCTATTACCACTGGACTCTCTCCTTCCTGGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202136.2
CDS-3UTR CAA 90 bp GAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTTGGCGAGGAGCCACGGGACACCAAGGCAAACTTGTaGACGTACTTGACACCCACA +
Preference number: 5 (lower is better)
Translates to: EGVPSSSTNSVFGEEPRDTKANL*TYLTPT
Trigger: TGTGGGTGTCAAGTACGTCAACAAGTTTGCCTTGGT...GTCCCGTGGCTCCTCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp TCTAAGGGGCTAAGGGCACCCACACACACACACACACACACACACACACACACATCATCACAGGTGGCATaGAGGAGGCGGGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: SKGLRAPTHTHTHTHTHTSSQVA*RRREEQ
Trigger: CTGCTCCTCCCGCCTCCTCAATGCCACCTGTGATGA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTGCCCTTAGCCCCTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp GAAGGAAACTGGGGAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTTGGCGAATGCTGAAGAAGTCCTaGATGCCCTCGGAGGAGACG +
Preference number: 5 (lower is better)
Translates to: EGNWGGCALQLHEFSLWRMLKKS*MPSEET
Trigger: CGTCTCCTCCGAGGGCATCAAGGACTTCTTCAGCAT...TCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTCCCCAGTTTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS CCA 90 bp TTCCCGGGAAACATGGAAACATTCTTGGTGACCAGCAGGGCGAGGTaGCCGGCTGTAGTTTCCCGGACCAGTTCGATGAAGTTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: FPGNMETFLVTSRAR*PAVVSRTSSMKFLH
Trigger: ATGGAGGAACTTCATCGAACTGGTCCGGGAAACTACAGCCGGCCACCTCGCCCTGCTGGTCACCAAGAATGTTTCCATGTTTCCCGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS-3UTR CAA 90 bp GAAAAAGAGGTGGTGAGGTCAGCTAGTGGTCCTGGCCCTGGAGTGAGCATGATGTCCGTGTCCGTGCTGTaGATGAAGGGACTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: EKEVVRSASGPGPGVSMMSVSVL*MKGLLS
Trigger: AGAGAGCAGTCCCTTCATCAACAGCACGGACACGGA...CATCATGCTCACTCCAGGGCCAGGACCACTAGCTGACCTCACCACCTCTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp AATGCCCAGTCCTCATCAAGCCTTGAGAGGGGCTTGAGCCAAGCAACAGGGCAGGCAGGCACAACACCATaGGTTGCGATTGCACTCATG +
Preference number: 5 (lower is better)
Translates to: NAQSSSSLERGLSQATGQAGTTP*VAIALM
Trigger: CATGAGTGCAATCGCAACCAATGGTGTTGTGCCTGC...CTGCCCTGTTGCTTGGCTCAAGCCCCTCTCAAGGCTTGATGAGGACTGGGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp CATGCCCAGGAAGGAGAGAGTCCAGTGGTAATAGCGAAATCGTGGCCTCCAGTTTCCGTGTCCGTGCTGTaGATGAAGGGACTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: HAQEGESPVVIAKSWPPVSVSVL*MKGLLS
Trigger: AGAGAGCAGTCCCTTCATCAACAGCACGGACACGGA...AACTGGAGGCCACGATTTCGCTATTACCACTGGACTCTCTCCTTCCTGGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202136.2
CDS-3UTR CAA 90 bp TCTAAGGGGCTAAGGGCACCCACACACACACACACACACACACACACACACACACCTTCCCAAGCCAGCTaGGCACAGACATCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: SKGLRAPTHTHTHTHTHTPSQAS*AQTSKP
Trigger: TGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAGG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTGCCCTTAGCCCCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp TCTAAGGGGCTAAGGGCACCCACACACACACACACACACACACACACACACACACATTTCCTCCAGACCTaGTGGTGTCGCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SKGLRAPTHTHTHTHTHTHFLQT*WCRSRK
Trigger: CTTCCTGCTGCGACACCACAAGGTCTGGAGGAAATG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTGCCCTTAGCCCCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp TGCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCAGGCGGAGCCGGGGGTaGGCTGGATTCTTCCTCCGA +
Preference number: 5 (lower is better)
Translates to: CVLAQRTQDQYRVGMRNTRRSRG*AGFFLR
Trigger: TCGGAGGAAGAATCCAGCCAACCCCCGGCTCCGCCT...GGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp CATGCCCAGGAAGGAGAGAGTCCAGTGGTAATAGCGAAATCGTGGCCTCCAGTTGGCTCTCCATTAGCTTaGCCATGGCCAAAGACCTGG +
Preference number: 5 (lower is better)
Translates to: HAQEGESPVVIAKSWPPVGSPLA*PWPKTW
Trigger: CCAGGTCTTTGGCCATGGCAAAGCTAATGGAGAGCC...AACTGGAGGCCACGATTTCGCTATTACCACTGGACTCTCTCCTTCCTGGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202136.2
CDS-3UTR CAA 90 bp CATGCCCAGGAAGGAGAGAGTCCAGTGGTAATAGCGAAATCGTGGCCTCCAGTTGCAGGCACAACACCATaGGTTGCGATTGCACTCATG +
Preference number: 5 (lower is better)
Translates to: HAQEGESPVVIAKSWPPVAGTTP*VAIALM
Trigger: CATGAGTGCAATCGCAACCAATGGTGTTGTGCCTGC...AACTGGAGGCCACGATTTCGCTATTACCACTGGACTCTCTCCTTCCTGGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202136.2
CDS-3UTR CAA 90 bp GAAGGAAACTGGGGAGGGTGTGCCCTCCAGCTCCACGAATTCAGTCTTTGGCGAGTGAAGATCCGCATTTaGCATTTCCTCCAGACCTTG +
Preference number: 5 (lower is better)
Translates to: EGNWGGCALQLHEFSLWRVKIRI*HFLQTL
Trigger: CAAGGTCTGGAGGAAATGCAAAATGCGGATCTTCAC...TCGCCAAAGACTGAATTCGTGGAGCTGGAGGGCACACCCTCCCCAGTTTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp AAACTTTGCTCTTGCCAACCAGAGTCTGGGCCCAGGTCATGCAACTTTGGTTCCGCAGGCACAACACCATaGGTTGCGATTGCACTCATG +
Preference number: 5 (lower is better)
Translates to: KLCSCQPESGPRSCNFGSAGTTP*VAIALM
Trigger: CATGAGTGCAATCGCAACCAATGGTGTTGTGCCTGC...GGAACCAAAGTTGCATGACCTGGGCCCAGACTCTGGTTGGCAAGAGCAAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp AGGCTACTGAAATATTGCACTCAGAGTAGAAGTCACCTGGATGGACATGGAACACAGCACGGTATTGTGTaGCAATCCCCCGAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: RLLKYCTQSRSHLDGHGTQHGIV*QSPEAP
Trigger: GGGGGCCTCGGGGGATTGCAACACAATACCGTGCTG...TGTTCCATGTCCATCCAGGTGACTTCTACTCTGAGTGCAATATTTCAGTAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp AAACTTTGCTCTTGCCAACCAGAGTCTGGGCCCAGGTCATGCAACTTTGGTTCCTCTGGCTTCTCCTCATaGTCACACGCTGTCTCTTCG +
Preference number: 5 (lower is better)
Translates to: KLCSCQPESGPRSCNFGSSGFSS*SHAVSS
Trigger: CGAAGAGACAGCGTGTGACAATGAGGAGAAGCCAGA...GGAACCAAAGTTGCATGACCTGGGCCCAGACTCTGGTTGGCAAGAGCAAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp CTCTCCTTTGCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGGAGGCCCGGGCATGTaGAGCAAAACTAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LSFAYWHKEHKINTESGCGGPGM*SKTSLA
Trigger: TGCCAAGCTAGTTTTGCTCAACATGCCCGGGCCTCC...GCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGCAAAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp CAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCCTAAATCGTGGCCTCCAGTaGGGTGTCCTCAGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: QYRVGMRNTETLKLKAGLNRGLQ*GVLSSV
Trigger: GACGCTGCTGAGGACACCCAACTGGAGGCCACGATT...TAGGCCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp CGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCCTAATAATAAGGCGGAGCCGGGGGTaGGCTGGATTCTTCCTCCGA +
Preference number: 5 (lower is better)
Translates to: RVGMRNTETLKLKAGLIIRRSRG*AGFFLR
Trigger: TCGGAGGAAGAATCCAGCCAACCCCCGGCTCCGCCT...TATTATTAGGCCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp TCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACATAGGTCTGTCCGTGTCCGTGCTGTaGATGAAGGGACTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: SPIYKGFGLHCIALHIGLSVSVL*MKGLLS
Trigger: AGAGAGCAGTCCCTTCATCAACAGCACGGACACGGA...CAGACCTATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR CAA 90 bp TTGCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACGTGCCCACCACCAAGTaGCCATTCACAGCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LRIGTKNTRSIPSRDAKYVPTTK*PFTASP
Trigger: TGGGGAAGCTGTGAATGGCAACTTGGTGGTGGGCAC...GTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp CAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAACAGCACGGTATTGTGTaGCAATCCCCCGAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: QRTQDQYRVGMRNTETLKQHGIV*QSPEAP
Trigger: GGGGGCCTCGGGGGATTGCAACACAATACCGTGCTG...TTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp GCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACATAATGCTGAAGAAGTCCTaGATGCCCTCGGAGGAGACG +
Preference number: 5 (lower is better)
Translates to: ATSPIYKGFGLHCIALHIMLKKS*MPSEET
Trigger: CGTCTCCTCCGAGGGCATCAAGGACTTCTTCAGCAT...TATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp ATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCATCACCCGGTCCAGTaGCTCAGTGAGGACCTCCAA +
Preference number: 5 (lower is better)
Translates to: IWLATSPIYKGFGLHCIAHHPVQ*LSEDLQ
Trigger: TTGGAGGTCCTCACTGAGCAACTGGACCGGGTGATG...GGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp TGGACTGCATTGCATTGCCCTGCACATAGGTCTGCTGAAACAGAAGCGACACTCTCATCAACGGAAACTTaGCTCTTGCCAACCAGAGTC +
Preference number: 5 (lower is better)
Translates to: WTALHCPAHRSAETEATLSSTET*LLPTRV
Trigger: GACTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGA...GAGTGTCGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAATGCAATGCAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202479.4
CDS-3UTR CAA 90 bp TCCTTTGCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAGCAGGCACAACACCATaGGTTGCGATTGCACTCATG +
Preference number: 5 (lower is better)
Translates to: SFAYWHKEHKINTESGCEAGTTP*VAIALM
Trigger: CATGAGTGCAATCGCAACCAATGGTGTTGTGCCTGC...TTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGCAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202479.4
CDS-3UTR CAA 90 bp TGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGAAACACCTCCACAGGTTCTCTTaGATGAGACCACTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: WHKEHKINTESGCEIPKHLHRFS*MRPLAA
Trigger: TGCTGCCAGTGGTCTCATCAAAGAGAACCTGTGGAG...GTGTTTCGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp CTTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATGTGCCCACCACCAAGTaGCCATTCACAGCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LDLACNLSYLQGFWTALHVPTTK*PFTASP
Trigger: TGGGGAAGCTGTGAATGGCAACTTGGTGGTGGGCAC...ATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp TCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACATAGGTCTGTCTGGCTTCTCCTCATaGTCACACGCTGTCTCTTCG +
Preference number: 5 (lower is better)
Translates to: SPIYKGFGLHCIALHIGLSGFSS*SHAVSS
Trigger: CGAAGAGACAGCGTGTGACAATGAGGAGAAGCCAGA...CAGACCTATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp ATTGCCCTGCACATAGGTCTGCTGAAACAGAAGCGACACTCTTCTCACTACCAGTGGATCTCTGTGACATaGTTTCGGGTGAAGTACTCA +
Preference number: 5 (lower is better)
Translates to: IALHIGLLKQKRHSSHYQWISVT*FRVKYS
Trigger: TGAGTACTTCACCCGAAACAATGTCACAGAGATCCA...CTGGTAGTGAGAAGAGTGTCGCTTCTGTTTCAGCAGACCTATGTGCAGGGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp CTCTCCTTTGCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGTGAAGATCCGCATTTaGCATTTCCTCCAGACCTTG +
Preference number: 5 (lower is better)
Translates to: LSFAYWHKEHKINTESGCVKIRI*HFLQTL
Trigger: CAAGGTCTGGAGGAAATGCAAAATGCGGATCTTCAC...GCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGCAAAGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp ATACTCTTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATGGAGGCCCGGGCATGTaGAGCAAAACTAGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: ILLIWLATSPIYKGFGLHGGPGM*SKTSLA
Trigger: TGCCAAGCTAGTTTTGCTCAACATGCCCGGGCCTCC...ATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAAGAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp GCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCGAAATACCGACGGAAACTTTGCTCTaGCCAACCAGAGTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: AYWHKEHKINTESGCEIPTETLL*PTRVWK
Trigger: TTTCCAGACTCTGGTTGGCAAGAGCAAAGTTTCCGT...CGGTATTTCGCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202479.4
CDS-3UTR CAA 90 bp CGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCCTAATAATACTGGCATCTTCTGCCTaGAAGATGGCCATAGCTGGG +
Preference number: 5 (lower is better)
Translates to: RVGMRNTETLKLKAGLIILASSA*KMAIAG
Trigger: CCCAGCTATGGCCATCTTCAAGGCAGAAGATGCCAG...TATTATTAGGCCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp CTCTCCTTTGCGTATTGGCACAAAGAACACAAGATCAATACCGAGTCGGGATGCAACTTGTTGACGTACTaGACACCCACAAAGACAACG +
Preference number: 5 (lower is better)
Translates to: LSFAYWHKEHKINTESGCNLLTY*TPTKTT
Trigger: CGTTGTCTTTGTGGGTGTCAAGTACGTCAACAAGTT...GCATCCCGACTCGGTATTGATCTTGTGTTCTTTGTGCCAATACGCAAAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp TGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACATACCAAGGCAAACTTGTaGACGTACTTGACACCCACA +
Preference number: 5 (lower is better)
Translates to: CNLSYLQGFWTALHCPAHTKANL*TYLTPT
Trigger: TGTGGGTGTCAAGTACGTCAACAAGTTTGCCTTGGT...ATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp TCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGCACATAGGTCTGAAGACCAAGGCAAACTaGTTGACGTACTTGACACCC +
Preference number: 5 (lower is better)
Translates to: SPIYKGFGLHCIALHIGLKTKAN*LTYLTP
Trigger: GGGTGTCAAGTACGTCAACAAGTTTGCCTTGGTCTT...CAGACCTATGTGCAGGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp CGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCCTAATAATAACACCATCACGCAGGTaGGAGGAGATCACTACCTGG +
Preference number: 5 (lower is better)
Translates to: RVGMRNTETLKLKAGLIITPSRR*EEITTW
Trigger: CCAGGTAGTGATCTCCTCCAACCTGCGTGATGGTGT...TATTATTAGGCCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp CAATACCGAGTCGGGATGCGAAATACCGAAACACTAAAATTAAAGGCAGGCCTAAAGACCAAGGCAAACTaGTTGACGTACTTGACACCC +
Preference number: 5 (lower is better)
Translates to: QYRVGMRNTETLKLKAGLKTKAN*LTYLTP
Trigger: GGGTGTCAAGTACGTCAACAAGTTTGCCTTGGTCTT...TAGGCCTGCCTTTAATTTTAGTGTTTCGGTATTTCGCATCCCGACTCGGTATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp TTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGCATTGCATTGCCCTGGATCTCTGTGACATaGTTTCGGGTGAAGTACTCA +
Preference number: 5 (lower is better)
Translates to: FGLQPLLFTRVLDCIALPWISVT*FRVKYS
Trigger: TGAGTACTTCACCCGAAACAATGTCACAGAGATCCA...GGGCAATGCAATGCAGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp ATAAATACTCTTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTCCTTCCCAAGCCAGCTaGGCACAGACATCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: INTLDLACNLSYLQGFWTPSQAS*AQTSKP
Trigger: TGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAGG...AGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAAGAGTATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp ATAAATACTCTTGATTTGGCTTGCAACCTCTCCTATTTACAAGGGTTTTGGACTGGCTCTCCATTAGCTTaGCCATGGCCAAAGACCTGC +
Preference number: 5 (lower is better)
Translates to: INTLDLACNLSYLQGFWTGSPLA*PWPKTC
Trigger: GCAGGTCTTTGGCCATGGCAAAGCTAATGGAGAGCC...AGTCCAAAACCCTTGTAAATAGGAGAGGTTGCAAGCCAAATCAAGAGTATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
CDS-3UTR CAA 90 bp AGCTACAGTGATTATAGAGGTGACTTGAACGACACAAGGTTCATAACAAATATTTGCATGCGCCGTACATaGGACTGGTTCAAGTTTTCC +
Preference number: 5 (lower is better)
Translates to: SYSDYRGDLNDTRFITNICMRRT*DWFKFS
Trigger: GGAAAACTTGAACCAGTCCAATGTACGGCGCATGCA...AATATTTGTTATGAACCTTGTGTCGTTCAAGTCACCTCTATAATCACTGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099092.8
CDS GCA 72 bp GACATAGGGGTGGTCCATGTCTACGGGGGTACCGTCTaGCAGGCCCACAGAGGGCATCCCACGCCTCTCGAC +
Preference number: 6 (lower is better)
Translates to: DIGVVHVYGGTV*QAHRGHPTPLD
Trigger: GTCGAGAGGCGTGGGATGCCCTCTGTGGGCCTGGCAGACGGTACCCCCGTAGACATGGACCACCCCTATGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CAA 90 bp CCCTCCGAGAAGCGCTCAGGGTTCCCGGGAAACATGGAAACATTCTaGGTGACCAGCAGGGCGAGGTGGCCGGCTGTAGTTTCCCGGACC +
Preference number: 6 (lower is better)
Translates to: PSEKRSGFPGNMETF*VTSRARWPAVVSRT
Trigger: GGTCCGGGAAACTACAGCCGGCCACCTCGCCCTGCTGGTCACCAAGAATGTTTCCATGTTTCCCGGGAACCCTGAGCGCTTCTCGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CCA 72 bp CTCTTCGGGAACATTGAGGCGGAGCCGGGGGTTGGCTaGATTCTTCCTCCGAATGGAGCCCCGAGACTCGTC +
Preference number: 6 (lower is better)
Translates to: LFGNIEAEPGVG*ILPPNGAPRLV
Trigger: GACGAGTCTCGGGGCTCCATTCGGAGGAAGAATCCAGCCAACCCCCGGCTCCGCCTCAATGTTCCCGAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CCA 72 bp GGAGATGGCGAGCTGCTAGGGCAGCTGGGAGCACTCTaGTCATGGATCAGCTGCACCTCCTCCTCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: GDGELLGQLGAL*SWISCTSSSGF
Trigger: GAAGCCAGAGGAGGAGGTGCAGCTGATCCATGACCAGAGTGCTCCCAGCTGCCCTAGCAGCTCGCCATCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CAA 72 bp GCTGTCTCTTCGGGAACATTGAGGCGGAGCCGGGGGTaGGCTGGATTCTTCCTCCGAATGGAGCCCCGAGAC +
Preference number: 6 (lower is better)
Translates to: AVSSGTLRRSRG*AGFFLRMEPRD
Trigger: GTCTCGGGGCTCCATTCGGAGGAAGAATCCAGCCAACCCCCGGCTCCGCCTCAATGTTCCCGAAGAGACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CAA 90 bp TTGTCACACGCTGTCTCTTCGGGAACATTGAGGCGGAGCCGGGGGTaGGCTGGATTCTTCCTCCGAATGGAGCCCCGAGACTCGTCTGTG +
Preference number: 6 (lower is better)
Translates to: LSHAVSSGTLRRSRG*AGFFLRMEPRDSSV
Trigger: CACAGACGAGTCTCGGGGCTCCATTCGGAGGAAGAATCCAGCCAACCCCCGGCTCCGCCTCAATGTTCCCGAAGAGACAGCGTGTGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CAA 90 bp TCCTCTGGCTTCTCCTCATTGTCACACGCTGTCTCTTCGGGAACATaGAGGCGGAGCCGGGGGTTGGCTGGATTCTTCCTCCGAATGGAG +
Preference number: 6 (lower is better)
Translates to: SSGFSSLSHAVSSGT*RRSRGLAGFFLRME
Trigger: CTCCATTCGGAGGAAGAATCCAGCCAACCCCCGGCTCCGCCTCAATGTTCCCGAAGAGACAGCGTGTGACAATGAGGAGAAGCCAGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS TCA 72 bp TCTCCTCATTGTCACACGCTGTCTCTTCGGGAACATTaGGGCGGAGCCGGGGGTTGGCTGGATTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: SPHCHTLSLREH*GGAGGWLDSSS
Trigger: GGAGGAAGAATCCAGCCAACCCCCGGCTCCGCCTCAATGTTCCCGAAGAGACAGCGTGTGACAATGAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CAA 72 bp AAGCGCTCAGGGTTCCCGGGAAACATGGAAACATTCTaGGTGACCAGCAGGGCGAGGTGGCCGGCTGTAGTT +
Preference number: 6 (lower is better)
Translates to: KRSGFPGNMETF*VTSRARWPAVV
Trigger: AACTACAGCCGGCCACCTCGCCCTGCTGGTCACCAAGAATGTTTCCATGTTTCCCGGGAACCCTGAGCGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CAA 72 bp TCCGTGCTGTTGATGAAGGGACTGCTCTCTTTGGGGTaGCCATCACCTTTGACGTCTTCCCTCGGGAGCCGG +
Preference number: 6 (lower is better)
Translates to: SVLLMKGLLSLG*PSPLTSSLGSR
Trigger: CCGGCTCCCGAGGGAAGACGTCAAAGGTGATGGCAACCCCAAAGAGAGCAGTCCCTTCATCAACAGCACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CAA 90 bp ATGTTCCTGCCATCGTACTCTCTGCCCTTCTCCGTGTCCGTGCTGTaGATGAAGGGACTGCTCTCTTTGGGGTTGCCATCACCGGGGTTG +
Preference number: 6 (lower is better)
Translates to: MFLPSYSLPFSVSVL*MKGLLSLGLPSPGL
Trigger: CAACCCCGGTGATGGCAACCCCAAAGAGAGCAGTCCCTTCATCAACAGCACGGACACGGAGAAGGGCAGAGAGTACGATGGCAGGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202136.2
ENSMUST00000202479.4
CDS CAA 72 bp TCCGTGTCCGTGCTGTTGATGAAGGGACTGCTCTCTTaGGGGTTGCCATCACCTTTGACGTCTTCCCTCGGG +
Preference number: 6 (lower is better)
Translates to: SVSVLLMKGLLS*GLPSPLTSSLG
Trigger: CCCGAGGGAAGACGTCAAAGGTGATGGCAACCCCAAAGAGAGCAGTCCCTTCATCAACAGCACGGACACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS TCA 72 bp CACCGCGGACCAGCATCACCCGGTCCAGTTGCTCAGTaGGGACCTCCAAGAATTCCATGTAGTTTTCATCCC +
Preference number: 6 (lower is better)
Translates to: HRGPASPGPVAQ*GPPRIPCSFHP
Trigger: GGGATGAAAACTACATGGAATTCTTGGAGGTCCTCACTGAGCAACTGGACCGGGTGATGCTGGTCCGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CCA 72 bp CCCACTGGCATCTTCTGCCTTGAAGATGGCCATAGCTaGGAAGAGATAAGCCAGCAGGATCTCGATCGTGCC +
Preference number: 6 (lower is better)
Translates to: PTGIFCLEDGHS*EEISQQDLDRA
Trigger: GGCACGATCGAGATCCTGCTGGCTTATCTCTTCCCAGCTATGGCCATCTTCAAGGCAGAAGATGCCAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CCA 72 bp GTGTGGTCACTGTCTCATTTCCTTCCCAAGCCAGCTTaGCACAGACATCAAAGCCATGGCGAGACAGCGTGC +
Preference number: 6 (lower is better)
Translates to: VWSLSHFLPKPA*HRHQSHGETAC
Trigger: GCACGCTGTCTCGCCATGGCTTTGATGTCTGTGCCAAGCTGGCTTGGGAAGGAAATGAGACAGTGACCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CCA 72 bp AACATGGAAACATTCTTGGTGACCAGCAGGGCGAGGTaGCCGGCTGTAGTTTCCCGGACCAGTTCGATGAAG +
Preference number: 6 (lower is better)
Translates to: NMETFLVTSRAR*PAVVSRTSSMK
Trigger: CTTCATCGAACTGGTCCGGGAAACTACAGCCGGCCACCTCGCCCTGCTGGTCACCAAGAATGTTTCCATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CAA 72 bp CCATCGTACTCTCTGCCCTTCTCCGTGTCCGTGCTGTaGATGAAGGGACTGCTCTCTTTGGGGTTGCCATCA +
Preference number: 6 (lower is better)
Translates to: PSYSLPFSVSVL*MKGLLSLGLPS
Trigger: TGATGGCAACCCCAAAGAGAGCAGTCCCTTCATCAACAGCACGGACACGGAGAAGGGCAGAGAGTACGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000099092.8
ENSMUST00000202136.2
ENSMUST00000202223.4
ENSMUST00000202479.4
ENSMUST00000202623.4
CDS CAA 90 bp ATGTTCCTGCCATCGTACTCTCTGCCCTTCTCCGTGTCCGTGCTGTaGATGAAGGGACTGCTCTCTTTGGGGTTGCCATCACCTTTGACG +
Preference number: 6 (lower is better)
Translates to: MFLPSYSLPFSVSVL*MKGLLSLGLPSPLT
Trigger: CGTCAAAGGTGATGGCAACCCCAAAGAGAGCAGTCCCTTCATCAACAGCACGGACACGGAGAAGGGCAGAGAGTACGATGGCAGGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CAA 90 bp ATGCGCCGTACATTGGACTGGTTCGGCTTCATGCTGAAGAAGTCCTaGATGCCCTCGGAGGAGACGGGACTGGGGCCTTTATTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: MRRTLDWFGFMLKKS*MPSEETGLGPLFFS
Trigger: AGAGAAGAATAAAGGCCCCAGTCCCGTCTCCTCCGAGGGCATCAAGGACTTCTTCAGCATGAAGCCGAACCAGTCCAATGTACGGCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202223.4
CDS TCA 72 bp GGAGACGGGACTGGGGCCTTTATTCTTCTCTGCCACTaGCTTATCCTTGGTCCAGGTAAGATGCACCTCTGG +
Preference number: 6 (lower is better)
Translates to: GDGTGAFILLCH*LILGPGKMHLW
Trigger: CCAGAGGTGCATCTTACCTGGACCAAGGATAAGTCAGTGGCAGAGAAGAATAAAGGCCCCAGTCCCGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS TCA 72 bp GCAAAACTAGCTTGGCATCCCGAGATTTATTCACGATaGCCTCGTTCAGCCGCACAGCTGTGTGCATGCGCC +
Preference number: 6 (lower is better)
Translates to: AKLAWHPEIYSR*PRSAAQLCACA
Trigger: GGCGCATGCACACAGCTGTGCGGCTGAACGAGGTCATCGTGAATAAATCTCGGGATGCCAAGCTAGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS CAA 90 bp GACTGGTTCAAGTTTTCCCACTCCGGCTTCATGCTGAAGAAGTCCTaGATGCCCTCGGAGGAGACGGGACTGGGGCCTTTATTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: DWFKFSHSGFMLKKS*MPSEETGLGPLFFS
Trigger: AGAGAAGAATAAAGGCCCCAGTCCCGTCTCCTCCGAGGGCATCAAGGACTTCTTCAGCATGAAGCCGGAGTGGGAAAACTTGAACCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099092.8
ENSMUST00000202623.4
CDS CCA 72 bp TCTTTGATGAGACCACTGGCAGCACCAGGAATGCCCTaGATCTCTGTGACATTGTTTCGGGTGAAGTACTCA +
Preference number: 6 (lower is better)
Translates to: SLMRPLAAPGMP*ISVTLFRVKYS
Trigger: TGAGTACTTCACCCGAAACAATGTCACAGAGATCCAGGGCATTCCTGGTGCTGCCAGTGGTCTCATCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099092.8
ENSMUST00000202223.4
ENSMUST00000202623.4
CDS GCA 72 bp GGTTTTGTTGTGGGCTGTTTTCATCAACGGAAACTTTaGTCTTGCCAACCAGAGTCTGGAAATCATGTAGTA +
Preference number: 6 (lower is better)
Translates to: GFVVGCFHQRKL*SCQPESGNHVV
Trigger: TACTACATGATTTCCAGACTCTGGTTGGCAAGAGCAAAGTTTCCGTTGATGAAAACAGCCCACAACAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202479.4