Pregenerated sensors for SLC12A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024597Ensembl transcript IDs: ENSMUST00000115366.3
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTGCCACTGCGATGCTGTGGTGTTCCTGACGATACAGTCACTTTaGCTGGGCACTGAAGTGCCATCCTTAGAGGAAGTCCATGGTGCA | + |
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Preference number: 1 (lower is better) Translates to: VCHCDAVVFLTIQSL*LGTEVPSLEEVHGA Trigger: TGCACCATGGACTTCCTCTAAGGATGGCACTTCAGTGCCCAGTCAAAGTGACTGTATCGTCAGGAACACCACAGCATCGCAGTGGCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR CCA 90 bp | CAGCGCTCGGCCCACGCCCTAGCTTCCATTCAGCAAATTCACGCATaGTATGGTTTCCTGGTGGGACTCTTTTATACTGCCCTAAACTCT | + |
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Preference number: 1 (lower is better) Translates to: QRSAHALASIQQIHA*YGFLVGLFYTALNS Trigger: AGAGTTTAGGGCAGTATAAAAGAGTCCCACCAGGAAACCATACCATGCGTGAATTTGCTGAATGGAAGCTAGGGCGTGGGCCGAGCGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR CCA 90 bp | CTCGGCCCACGCCCTAGCTTCCATTCAGCAAATTCACGCATGGTATaGTTTCCTGGTGGGACTCTTTTATACTGCCCTAAACTCTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: LGPRPSFHSANSRMV*FPGGTLLYCPKLCK Trigger: TTTGCAGAGTTTAGGGCAGTATAAAAGAGTCCCACCAGGAAACCATACCATGCGTGAATTTGCTGAATGGAAGCTAGGGCGTGGGCCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR GCA 90 bp | GCTAACATCACATCACAAACAGTATCACCCTCCCTCCCTGTTAGGTaGATCGAGATTCACTGTGTGTCCTTTAAACACACGTGTAACATG | + |
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Preference number: 1 (lower is better) Translates to: ANITSQTVSPSLPVR*IEIHCVSFKHTCNM Trigger: CATGTTACACGTGTGTTTAAAGGACACACAGTGAATCTCGATGCACCTAACAGGGAGGGAGGGTGATACTGTTTGTGATGTGATGTTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR GCA 90 bp | CACTTCCTTTATTGCAGTAACTTCTGTACAAAGCAGCAACCGCAATaGTCAGGGTTAAAACATTACAAAGGCGTCTGTCACAGGAACAGT | + |
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Preference number: 1 (lower is better) Translates to: HFLYCSNFCTKQQPQ*SGLKHYKGVCHRNS Trigger: ACTGTTCCTGTGACAGACGCCTTTGTAATGTTTTAACCCTGAGCATTGCGGTTGCTGCTTTGTACAGAAGTTACTGCAATAAAGGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTGCATATAAAGCTTTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTGGAGTAGACTACAACTaGAGTCTCCATCTATCTATC | + |
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Preference number: 2 (lower is better) Translates to: LSAYKAFRQHMCTCTLSSGVDYN*SLHLSI Trigger: GATAGATAGATGGAGACTTCAGTTGTAGTCTACTCC...ACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAAAGCTTTATATGCAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTGCATATAAAGCTTTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTATTCTAACCGAAAGTTaGTCTGGGCCTCTTTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LSAYKAFRQHMCTCTLSSILTES*SGPLFP Trigger: AGGAAAAAGAGGCCCAGACCAACTTTCGGTTAGAAT...ACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAAAGCTTTATATGCAGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR-3UTR TCA 90 bp | GCTTTCAGGATAGCACGTGTGCACATGCGCGCTGTCTGTCTGCATATAAAGCTTCGACAGGTCTCTGGATaGAATTTGGTTATTTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: AFRIARVHMRAVCLHIKLRQVSG*NLVISE Trigger: TTCTGAAATAACCAAATTTCATCCAGAGACCTGTCG...AAGCTTTATATGCAGACAGACAGCGCGCATGTGCACACGTGCTATCCTGAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR-3UTR GCA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCACAGCACATGTGCACATaGACGCTGTCGAGTGCATTA | + |
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Preference number: 2 (lower is better) Translates to: VLATVMVVFKGGNLLLTSQHMCT*TLSSAL Trigger: TAATGCACTCGACAGCGTGCATGTGCACATGTGCTG...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCACAGCAAATTCACGCATaGTATGGTTTCCTGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: VLATVMVVFKGGNLLLTSQQIHA*YGFLVG Trigger: TCCCACCAGGAAACCATACCATGCGTGAATTTGCTG...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCAAATTCACGCATGGTATaGTTTCCTGGTGGGACTCTT | + |
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Preference number: 2 (lower is better) Translates to: VLATVMVVFKGGNLLLTSNSRMV*FPGGTL Trigger: AAGAGTCCCACCAGGAAACCATACCATGCGTGAATT...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR-3UTR TCA 90 bp | CTCCACTTCCTTTATTGCAGTAACTTCTGTACAAAGCAGCAACCGCAATGCTCAAACTGGATAACTGTATaGAGTCACACTATGGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LHFLYCSNFCTKQQPQCSNWITV*SHTMVF Trigger: GAAGACCATAGTGTGACTTCATACAGTTATCCAGTT...TGAGCATTGCGGTTGCTGCTTTGTACAGAAGTTACTGCAATAAAGGAAGTGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR-3UTR TCA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCAACATTTCCCTTAAGATaGCAAAAATCTGGGACCGTT | + |
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Preference number: 2 (lower is better) Translates to: VLATVMVVFKGGNLLLTSTFPLR*QKSGTV Trigger: AACGGTCCCAGATTTTTGTCATCTTAAGGGAAATGT...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR-3UTR GCA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCATACTGCCCTAAACTCTaGAAAATTTACAACAAATGG | + |
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Preference number: 2 (lower is better) Translates to: VLATVMVVFKGGNLLLTSYCPKL*KIYNKW Trigger: CCATTTGTTGTAAATTTTGCAGAGTTTAGGGCAGTA...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCAATTAAGATTGAGATCTaGAGTAGACTACAACTGAAG | + |
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Preference number: 2 (lower is better) Translates to: VLATVMVVFKGGNLLLTSIKIEI*SRLQLK Trigger: CTTCAGTTGTAGTCTACTCCAGATCTCAATCTTAAT...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR-3UTR CCA 90 bp | ATGTTTTTAGAAAATCCTTCCTTGAAGCTGAGAAACATCACACTGACAACTGTATCTCTGGATGAAATTTaGTTATTTCAGAAGGCACCT | + |
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Preference number: 2 (lower is better) Translates to: MFLENPSLKLRNITLTTVSLDEI*LFQKAP Trigger: AGGTGCCTTCTGAAATAACCAAATTTCATCCAGAGA...TACAGTTGTCAGTGTGATGTTTCTCAGCTTCAAGGAAGGATTTTCTAAAAACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR TCA 72 bp | CAGTCCCCGTCTGCCACTGCGATGCTGTGGTGTTCCTaGCGATACAGTCACTTTGACTGGGCACTGAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: QSPSATAMLWCS*RYSHFDWALKC Trigger: GCACTTCAGTGCCCAGTCAAAGTGACTGTATCGTCAGGAACACCACAGCATCGCAGTGGCAGACGGGGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR TCA 72 bp | GGTGTTCCTGACGATACAGTCACTTTGACTGGGCACTaGAGTGCCATCCTTAGAGGAAGTCCATGGTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: GVPDDTVTLTGH*SAILRGSPWCR Trigger: TCTGCACCATGGACTTCCTCTAAGGATGGCACTTCAGTGCCCAGTCAAAGTGACTGTATCGTCAGGAACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR GCA 72 bp | TTTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTaGATTAGCAGACAAGGTCAAACGCACAAACTGGCA | + |
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Preference number: 3 (lower is better) Translates to: FQAAHVHMHAVE*ISRQGQTHKLA Trigger: TGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR CCA 72 bp | GCCCACGCCCTAGCTTCCATTCAGCAAATTCACGCATaGTATGGTTTCCTGGTGGGACTCTTTTATACTGCC | + |
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Preference number: 3 (lower is better) Translates to: AHALASIQQIHA*YGFLVGLFYTA Trigger: GGCAGTATAAAAGAGTCCCACCAGGAAACCATACCATGCGTGAATTTGCTGAATGGAAGCTAGGGCGTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR TCA 72 bp | CCAGTCTGCATCCGCGCAGCACAAGTACCCCACAACTaGGAACGCTTTTCTGACATTTCCCTTAAGATGACA | + |
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Preference number: 3 (lower is better) Translates to: PVCIRAAQVPHN*ERFSDISLKMT Trigger: TGTCATCTTAAGGGAAATGTCAGAAAAGCGTTCTCAGTTGTGGGGTACTTGTGCTGCGCGGATGCAGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR-3UTR CAA 90 bp | TTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTGCATTAGCAGACAAGGTCCTTGGGCTCCATTTTTaGGATACTTTCCCCACATAT | + |
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Preference number: 3 (lower is better) Translates to: FRQHMCTCTLSSALADKVLGLHF*DTFPTY Trigger: ATATGTGGGGAAAGTATCCAAAAAATGGAGCCCAAG...GACCTTGTCTGCTAATGCACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR GCA 72 bp | ACATCACAAACAGTATCACCCTCCCTCCCTGTTAGGTaGATCGAGATTCACTGTGTGTCCTTTAAACACACG | + |
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Preference number: 3 (lower is better) Translates to: TSQTVSPSLPVR*IEIHCVSFKHT Trigger: CGTGTGTTTAAAGGACACACAGTGAATCTCGATGCACCTAACAGGGAGGGAGGGTGATACTGTTTGTGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR CCA 72 bp | CGCCCTAGCTTCCATTCAGCAAATTCACGCATGGTATaGTTTCCTGGTGGGACTCTTTTATACTGCCCTAAA | + |
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Preference number: 3 (lower is better) Translates to: RPSFHSANSRMV*FPGGTLLYCPK Trigger: TTTAGGGCAGTATAAAAGAGTCCCACCAGGAAACCATACCATGCGTGAATTTGCTGAATGGAAGCTAGGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR GCA 72 bp | TATTGCAGTAACTTCTGTACAAAGCAGCAACCGCAATaGTCAGGGTTAAAACATTACAAAGGCGTCTGTCAC | + |
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Preference number: 3 (lower is better) Translates to: YCSNFCTKQQPQ*SGLKHYKGVCH Trigger: GTGACAGACGCCTTTGTAATGTTTTAACCCTGAGCATTGCGGTTGCTGCTTTGTACAGAAGTTACTGCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR CCA 72 bp | CGCTTTTCTGACATTTCCCTTAAGATGACAAAAATCTaGGACCGTTCTCCACCGAAACTTAGAGATCATCCA | + |
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Preference number: 3 (lower is better) Translates to: RFSDISLKMTKI*DRSPPKLRDHP Trigger: TGGATGATCTCTAAGTTTCGGTGGAGAACGGTCCCAGATTTTTGTCATCTTAAGGGAAATGTCAGAAAAGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR-3UTR CAA 90 bp | AGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACAATCAAGGCTAAAGGCTTaGCACTCCTTTCAGCAATCA | + |
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Preference number: 3 (lower is better) Translates to: SALADKVKRTNWQFSLTQSRLKA*HSFQQS Trigger: TGATTGCTGAAAGGAGTGCAAAGCCTTTAGCCTTGA...TTGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR TCA 72 bp | CCACTTGTTAGCCCTTTACCTAACTGGATAACTGTATaGAGTCACACTATGGTCTTCAAATTGTCTCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: PLVSPLPNWITV*SHTMVFKLSLS Trigger: GGACAGAGACAATTTGAAGACCATAGTGTGACTTCATACAGTTATCCAGTTAGGTAAAGGGCTAACAAGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR TCA 72 bp | ACAACTGAGAACGCTTTTCTGACATTTCCCTTAAGATaGCAAAAATCTGGGACCGTTCTCCACCGAAACTTA | + |
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Preference number: 3 (lower is better) Translates to: TTENAFLTFPLR*QKSGTVLHRNL Trigger: TAAGTTTCGGTGGAGAACGGTCCCAGATTTTTGTCATCTTAAGGGAAATGTCAGAAAAGCGTTCTCAGTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR-3UTR CAA 90 bp | CTCCACTTCCTTTATTGCAGTAACTTCTGTACAAAGCAGCAACCGCAATGCTCATTAGAAAATCCTTCCTaGAAGCTGAGAAACATCACA | + |
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Preference number: 3 (lower is better) Translates to: LHFLYCSNFCTKQQPQCSLENPS*KLRNIT Trigger: TGTGATGTTTCTCAGCTTCAAGGAAGGATTTTCTAA...TGAGCATTGCGGTTGCTGCTTTGTACAGAAGTTACTGCAATAAAGGAAGTGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| 3UTR TCA 72 bp | CAGTCATTAAGATTGAGATCTGGAGTAGACTACAACTaGAGTCTCCATCTATCTATCAATGGGGCAACTTTC | + |
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Preference number: 3 (lower is better) Translates to: QSLRLRSGVDYN*SLHLSINGATF Trigger: GAAAGTTGCCCCATTGATAGATAGATGGAGACTTCAGTTGTAGTCTACTCCAGATCTCAATCTTAATGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR CCA 90 bp | GCTTTCAGGATAGCACGTGTGCACATGCGCGCTGTCTGTCTGCATATAAAGCTTCCCATCGCCCGCCGCTaGGGTTCCCTCTCCGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: AFRIARVHMRAVCLHIKLPIARR*GSLSAH Trigger: GTGCGCGGAGAGGGAACCCCAGCGGCGGGCGATGGG...AAGCTTTATATGCAGACAGACAGCGCGCATGTGCACACGTGCTATCCTGAAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR CCA 90 bp | TTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTGCATTAGCAGACAAGGTCACCTGGAAGCGGCTCTaGCTGGGGGTGGGCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: FRQHMCTCTLSSALADKVTWKRL*LGVGPR Trigger: TCTGGGGCCCACCCCCAGCCAGAGCCGCTTCCAGGT...GACCTTGTCTGCTAATGCACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR CCA 90 bp | TTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTGCATTAGCAGACAAGGTCCTTCCTCGCTGCCCTTaGCCACGCCGCTCTCACCGC | + |
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Preference number: 4 (lower is better) Translates to: FRQHMCTCTLSSALADKVLPRCP*PRRSHR Trigger: GCGGTGAGAGCGGCGTGGCCAAGGGCAGCGAGGAAG...GACCTTGTCTGCTAATGCACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR GCA 90 bp | GCTTTCAGGATAGCACGTGTGCACATGCGCGCTGTCTGTCTGCATATAAAGCTTCCCCCGAGTGCAGGCTaGTGCCCTCGCTCAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: AFRIARVHMRAVCLHIKLPPSAG*CPRSAP Trigger: CGGTGCTGAGCGAGGGCAGCAGCCTGCACTCGGGGG...AAGCTTTATATGCAGACAGACAGCGCGCATGTGCACACGTGCTATCCTGAAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR CCA 90 bp | GCTTTCAGGATAGCACGTGTGCACATGCGCGCTGTCTGTCTGCATATAAAGCTTCGCGGAAGCGGCCCTTaGCTTCCTCGCTGCCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: AFRIARVHMRAVCLHIKLRGSGP*LPRCPW Trigger: CCAAGGGCAGCGAGGAAGCCAAGGGCCGCTTCCGCG...AAGCTTTATATGCAGACAGACAGCGCGCATGTGCACACGTGCTATCCTGAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR GCA 90 bp | CTGTCTGCATATAAAGCTTTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTCTCATCGTGGAGCTCTaGCAGGCTGGGCCGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LSAYKAFRQHMCTCTLSSLIVEL*QAGPEQ Trigger: CTGCTCCGGCCCAGCCTGGCAGAGCTCCACGATGAG...ACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAAAGCTTTATATGCAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR CCA 90 bp | GCTTTCAGGATAGCACGTGTGCACATGCGCGCTGTCTGTCTGCATATAAAGCTTGAAACCGGGTCCACCTaGAAGCGGCTCTGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: AFRIARVHMRAVCLHIKLETGST*KRLWLG Trigger: CCCCAGCCAGAGCCGCTTCCAGGTGGACCCGGTTTC...AAGCTTTATATGCAGACAGACAGCGCGCATGTGCACACGTGCTATCCTGAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR GCA 90 bp | AGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACAATGGGCCCCAGAGGTCTaGCCAGCCCATCGCCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: SALADKVKRTNWQFSLTQWAPEV*PAHRPP Trigger: CGGCGGGCGATGGGCTGGGCAGACCTCTGGGGCCCA...TTGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR CCA 90 bp | CTGTCTGCATATAAAGCTTTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTTTTTCCAGCTCATCGTaGAGCTCTGCCAGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LSAYKAFRQHMCTCTLSSFSSSS*SSARLG Trigger: GCCCAGCCTGGCAGAGCTCCACGATGAGCTGGAAAA...ACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAAAGCTTTATATGCAGACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR CCA 90 bp | AGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACAAGGAGCTCTGCCAGGCTaGGCCGGAGCAGCTTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: SALADKVKRTNWQFSLTQGALPG*AGAASR Trigger: GCGAGAAGCTGCTCCGGCCCAGCCTGGCAGAGCTCC...TTGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR CCA 90 bp | TTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTGCATTAGCAGACAAGGTCCAACGGCCACCGCATTaGCAAAAGCAAAGATCAAGC | + |
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Preference number: 4 (lower is better) Translates to: FRQHMCTCTLSSALADKVQRPPH*QKQRSS Trigger: GCTTGATCTTTGCTTTTGCCAATGCGGTGGCCGTTG...GACCTTGTCTGCTAATGCACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR CCA 90 bp | AGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACAAGTGTCCCCGCCGTTCTaGAAGCTCACGTTGGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: SALADKVKRTNWQFSLTQVSPPF*KLTLGP Trigger: CGGGCCCAACGTGAGCTTCCAGAACGGCGGGGACAC...TTGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR CCA 90 bp | CTCCACTTCCTTTATTGCAGTAACTTCTGTACAAAGCAGCAACCGCAATGCTCAGGTAGTGGTCGATCCTaGGCACCGCGTCCATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: LHFLYCSNFCTKQQPQCSGSGRS*APRPWC Trigger: ACACCATGGACGCGGTGCCCAGGATCGACCACTACC...TGAGCATTGCGGTTGCTGCTTTGTACAGAAGTTACTGCAATAAAGGAAGTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR TCA 90 bp | GCTTTCAGGATAGCACGTGTGCACATGCGCGCTGTCTGTCTGCATATAAAGCTTTCCTTTGGGTATGGCTaGCTGAGGATCTGCAAGATC | + |
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Preference number: 4 (lower is better) Translates to: AFRIARVHMRAVCLHIKLSFGYG*LRICKI Trigger: GATCTTGCAGATCCTCAGTCAGCCATACCCAAAGGA...AAGCTTTATATGCAGACAGACAGCGCGCATGTGCACACGTGCTATCCTGAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR GCA 90 bp | GCTTTCAGGATAGCACGTGTGCACATGCGCGCTGTCTGTCTGCATATAAAGCTTCACAATCTGAGCCTTTaGTTCCCACTCCATTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: AFRIARVHMRAVCLHIKLHNLSL*FPLHSS Trigger: GCTGGAATGGAGTGGGAAGCAAAGGCTCAGATTGTG...AAGCTTTATATGCAGACAGACAGCGCGCATGTGCACACGTGCTATCCTGAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR GCA 90 bp | TTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTGCATTAGCAGACAAGGTCGTTGTAGTATTTGAATaGAGGACGCCATCCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: FRQHMCTCTLSSALADKVVVVFE*RTPSWR Trigger: TCTCCAGGATGGCGTCCTGCATTCAAATACTACAAC...GACCTTGTCTGCTAATGCACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR CCA 90 bp | GCTTTCAGGATAGCACGTGTGCACATGCGCGCTGTCTGTCTGCATATAAAGCTTCAACAGTGGCTGAGTTaGAGTCTTGCCATCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AFRIARVHMRAVCLHIKLQQWLS*SLAILF Trigger: GAAGAGGATGGCAAGACTCCAACTCAGCCACTGTTG...AAGCTTTATATGCAGACAGACAGCGCGCATGTGCACACGTGCTATCCTGAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | CTGTCTGCATATAAAGCTTTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTCTTCTTGCTCTCCAGTaGGATAAACGTCCCTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSAYKAFRQHMCTCTLSSLLALQ*DKRPYD Trigger: GTCATAGGGACGTTTATCTCACTGGAGAGCAAGAAG...ACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAAAGCTTTATATGCAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | TTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTGCATTAGCAGACAAGGTCATTCAGCAATCAGGATaGATCCCAGTGCAATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FRQHMCTCTLSSALADKVIQQSG*IPVQSE Trigger: TTCTGATTGCACTGGGATTCATCCTGATTGCTGAAT...GACCTTGTCTGCTAATGCACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | GCTTTCAGGATAGCACGTGTGCACATGCGCGCTGTCTGTCTGCATATAAAGCTTTTTTTCAACAGTGGCTaGGTTGGAGTCTTGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AFRIARVHMRAVCLHIKLFFNSG*VGVLPS Trigger: GGATGGCAAGACTCCAACTCAGCCACTGTTGAAAAA...AAGCTTTATATGCAGACAGACAGCGCGCATGTGCACACGTGCTATCCTGAAAGC 49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR GCA 90 bp | CTCCACTTCCTTTATTGCAGTAACTTCTGTACAAAGCAGCAACCGCAATGCTCATGTTGTGGCCGAAGGTaGGCAGGTAGTAGGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHFLYCSNFCTKQQPQCSCCGRR*AGSRCW Trigger: CCAACACCTACTACCTGCGCACCTTCGGCCACAACA...TGAGCATTGCGGTTGCTGCTTTGTACAGAAGTTACTGCAATAAAGGAAGTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR GCA 90 bp | CTGTCTGCATATAAAGCTTTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTAAAGATCAAGCCAATTaGACCACCAAATTCCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSAYKAFRQHMCTCTLSSKDQAN*TTKFRP Trigger: GGGCCGGAATTTGGTGGTGCAATTGGCTTGATCTTT...ACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAAAGCTTTATATGCAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | CTGTCTGCATATAAAGCTTTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTGTGTTCCTTTGGGTATaGCTGACTGAGGATCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSAYKAFRQHMCTCTLSSVFLWV*LTEDLQ Trigger: TTGCAGATCCTCAGTCAGCCATACCCAAAGGAACAC...ACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAAAGCTTTATATGCAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | GCTTTCAGGATAGCACGTGTGCACATGCGCGCTGTCTGTCTGCATATAAAGCTTCAAGCTCATTATCTGTaGTTCGCCAAGGCTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: AFRIARVHMRAVCLHIKLQAHYL*FAKAHL Trigger: AAGATGAGCCTTGGCGAATCACAGATAATGAGCTTG...AAGCTTTATATGCAGACAGACAGCGCGCATGTGCACACGTGCTATCCTGAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR GCA 90 bp | ATGTTTTTAGAAAATCCTTCCTTGAAGCTGAGAAACATCACACTGACAACTGTACCTTGGCTTCCTCGCTaGCCTTGGCCACGCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MFLENPSLKLRNITLTTVPWLPR*PWPRRS Trigger: AGAGCGGCGTGGCCAAGGGCAGCGAGGAAGCCAAGG...TACAGTTGTCAGTGTGATGTTTCTCAGCTTCAAGGAAGGATTTTCTAAAAACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR GCA 90 bp | TACTCTCATGAACTTCAGTCCAACAAGAAAGAATTAGCAGTCATTAAGATTGAGCCGAGTGCAGGCTGCTaGCCTCGCTCAGCACCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YSHELQSNKKELAVIKIEPSAGC*PRSAPC Trigger: ACACGGTGCTGAGCGAGGGCAGCAGCCTGCACTCGG...CTCAATCTTAATGACTGCTAATTCTTTCTTGTTGGACTGAAGTTCATGAGAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTTTTAGAAAATCCTTCCTTGAAGCTGAGAAACATCACACTGACAACTGTATCTGGAAGCTCACGTTaGGCCCGTCGCCACCGACCC | + |
|
Preference number: 4 (lower is better) Translates to: MFLENPSLKLRNITLTTVSGSSR*ARRHRP Trigger: GGGTCGGTGGCGACGGGCCCAACGTGAGCTTCCAGA...TACAGTTGTCAGTGTGATGTTTCTCAGCTTCAAGGAAGGATTTTCTAAAAACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | GAGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACAGGACTATCACATATGTaGGCAACGCAGCCCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ECISRQGQTHKLAVFFNTGLSHM*ATQPTS Trigger: ACTGGTGGGCTGCGTTGCTCACATATGTGATAGTCC...TGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | TTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTGCATTAGCAGACAAGGTCGGATTTTTCACCAGATaGTTTGCAAGTATCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: FRQHMCTCTLSSALADKVGFFTR*FASILI Trigger: GATCAAGATACTTGCAAATCATCTGGTGAAAAATCC...GACCTTGTCTGCTAATGCACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR GCA 90 bp | CTGTCTGCATATAAAGCTTTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTCAAATCCTGACACCATaGTCATCACCTGAAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSAYKAFRQHMCTCTLSSQILTP*SSPESC Trigger: ACAACTTTCAGGTGATGAGCATGGTGTCAGGATTTG...ACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAAAGCTTTATATGCAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | CTGTCTGCATATAAAGCTTTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTATTGGTAGCTATTGCTaGAGTAGACAATCCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSAYKAFRQHMCTCTLSSIGSYC*SRQSCD Trigger: ATCACAGGATTGTCTACTTCAGCAATAGCTACCAAT...ACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAAAGCTTTATATGCAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | CTCCACTTCCTTTATTGCAGTAACTTCTGTACAAAGCAGCAACCGCAATGCTCACAGGACAAGTGTGTTTaGCTTCATACGACCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHFLYCSNFCTKQQPQCSQDKCV*LHTTKS Trigger: GGACTTGGTCGTATGAAGCCAAACACACTTGTCCTG...TGAGCATTGCGGTTGCTGCTTTGTACAGAAGTTACTGCAATAAAGGAAGTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | GAGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACAACCATGCTCATCACCTaGAAGTTGTTCATTAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ECISRQGQTHKLAVFFNTTMLIT*KLFISP Trigger: CGGGCTAATGAACAACTTTCAGGTGATGAGCATGGT...TGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | CTCCACTTCCTTTATTGCAGTAACTTCTGTACAAAGCAGCAACCGCAATGCTCATCTTTATCATCTTCGTaGAGTCTGTACGGCTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: LHFLYCSNFCTKQQPQCSSLSSS*SLYGSI Trigger: GATCGAGCCGTACAGACTTCACGAAGATGATAAAGA...TGAGCATTGCGGTTGCTGCTTTGTACAGAAGTTACTGCAATAAAGGAAGTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR GCA 90 bp | GAGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACACACAACAGTGGCCATTaGTATTACGACGACAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ECISRQGQTHKLAVFFNTHNSGH*YYDDRE Trigger: CTCTCTGTCGTCGTAATAGCAATGGCCACTGTTGTG...TGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR GCA 90 bp | CTCCACTTCCTTTATTGCAGTAACTTCTGTACAAAGCAGCAACCGCAATGCTCACTGCATCAAGTATTGTaGACCTTCTCGCAAGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LHFLYCSNFCTKQQPQCSLHQVL*TFSQVI Trigger: GATGACTTGCGAGAAGGTGCACAATACTTGATGCAG...TGAGCATTGCGGTTGCTGCTTTGTACAGAAGTTACTGCAATAAAGGAAGTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | GAGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACACGACCACAGCATCTCTaGTTGGAGTACTTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ECISRQGQTHKLAVFFNTRPQHL*LEYFLL Trigger: GAGAAGAAAGTACTCCAACCAGAGATGCTGTGGTCG...TGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | AGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACAAAGCCAAAGAAACCCTTaGGCTTCTTGCTCTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SALADKVKRTNWQFSLTQSQRNP*ASCSPV Trigger: CACTGGAGAGCAAGAAGCCCAAGGGTTTCTTTGGCT...TTGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | CTCCACTTCCTTTATTGCAGTAACTTCTGTACAAAGCAGCAACCGCAATGCTCACTGAAGTTTTTCACATaGTCCTCCACCCCAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHFLYCSNFCTKQQPQCSLKFFT*SSTPER Trigger: TCTTTCTGGGGTGGAGGACCATGTGAAAAACTTCAG...TGAGCATTGCGGTTGCTGCTTTGTACAGAAGTTACTGCAATAAAGGAAGTGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | GAGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACAGGGCCCATATGCACATaGCCACAGATCATTAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: ECISRQGQTHKLAVFFNTGPICT*PQIIKP Trigger: TGGTTTAATGATCTGTGGCCATGTGCATATGGGCCC...TGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | TACTCTCATGAACTTCAGTCCAACAAGAAAGAATTAGCAGTCATTAAGATTGAGAACCAGGAGGACTGGTaGCAGGTCCTTCGAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YSHELQSNKKELAVIKIENQEDW*QVLRES Trigger: GCTCTCTCGAAGGACCTGCCACCAGTCCTCCTGGTT...CTCAATCTTAATGACTGCTAATTCTTTCTTGTTGGACTGAAGTTCATGAGAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCAACATGTTGTAGTATTTaGATGCAGGACGCCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLATVMVVFKGGNLLLTSTCCSI*MQDAIL Trigger: CAGGATGGCGTCCTGCATTCAAATACTACAACATGT...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR GCA 90 bp | CTGTCTGCATATAAAGCTTTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTCGTAAGAACAAGTATTaGTCTCACAATAAGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSAYKAFRQHMCTCTLSSRKNKY*SHNKRS Trigger: ACTTCTCTTATTGTGAGAGCAATACTTGTTCTTACG...ACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAAAGCTTTATATGCAGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR GCA 90 bp | AGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACAATTCTCGCAAGTCATCTaGGTGAACCGGAGCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SALADKVKRTNWQFSLTQFSQVI*VNRSIE Trigger: TTCTATGCTCCGGTTCACGCAGATGACTTGCGAGAA...TTGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | CTCCACTTCCTTTATTGCAGTAACTTCTGTACAAAGCAGCAACCGCAATGCTCAGAGCCTGAAATATTTTaGGAGCACTCACAAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LHFLYCSNFCTKQQPQCSEPEIF*EHSQEM Trigger: CATCTCTTGTGAGTGCTCCCAAAATATTTCAGGCTC...TGAGCATTGCGGTTGCTGCTTTGTACAGAAGTTACTGCAATAAAGGAAGTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCAGCCATCGCTGATATCTaGCTTGATCAATGGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: VLATVMVVFKGGNLLLTSAIADI*LDQWTS Trigger: AGATGTCCATTGATCAAGCCAGATATCAGCGATGGC...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | GAGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACAGCCTTTCCGTGCGACTaGAAGACTCATGACAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: ECISRQGQTHKLAVFFNTAFPCD*KTHDNN Trigger: ATTATTGTCATGAGTCTTCCAGTCGCACGGAAAGGC...TGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | ATGTTTTTAGAAAATCCTTCCTTGAAGCTGAGAAACATCACACTGACAACTGTAAATGCTGCAGTGCACTaGGGTAAGTCAGCGCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MFLENPSLKLRNITLTTVNAAVH*GKSALV Trigger: CACAAGCGCTGACTTACCTCAGTGCACTGCAGCATT...TACAGTTGTCAGTGTGATGTTTCTCAGCTTCAAGGAAGGATTTTCTAAAAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCATATCTCCAAGGACCATaGTATCAGAGAAGTCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: VLATVMVVFKGGNLLLTSYLQGP*YQRSLS Trigger: GGATAGACTTCTCTGATATCATGGTCCTTGGAGATA...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR GCA 90 bp | ATGTTTTTAGAAAATCCTTCCTTGAAGCTGAGAAACATCACACTGACAACTGTAACTCTCGGCAGTGTATaGGACCACAGCATCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MFLENPSLKLRNITLTTVTLGSV*DHSISG Trigger: ACCAGAGATGCTGTGGTCGCATACACTGCCGAGAGT...TACAGTTGTCAGTGTGATGTTTCTCAGCTTCAAGGAAGGATTTTCTAAAAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR GCA 90 bp | GAGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACACCCAAATGTTTAACATaGAGCGGACTAATACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: ECISRQGQTHKLAVFFNTPKCLT*SGLIHP Trigger: AGGGTGTATTAGTCCGCTGCATGTTAAACATTTGGG...TGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCACACAGCATCTCTGGTTaGAGTACTTTCTTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VLATVMVVFKGGNLLLTSHSISG*STFFSI Trigger: AATGGAGAAGAAAGTACTCCAACCAGAGATGCTGTG...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | TACTCTCATGAACTTCAGTCCAACAAGAAAGAATTAGCAGTCATTAAGATTGAGCCATATACAGAGCACTaGACACAGCGCCTTTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSHELQSNKKELAVIKIEPYTEH*TQRLSV Trigger: CACGGAAAGGCGCTGTGTCCAGTGCTCTGTATATGG...CTCAATCTTAATGACTGCTAATTCTTTCTTGTTGGACTGAAGTTCATGAGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | AGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACAAGGACTAATACACCCTTaGTCCAGCCAAACTTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: SALADKVKRTNWQFSLTQGLIHP*SSQTLQ Trigger: TTGTAAAGTTTGGCTGGATCAAGGGTGTATTAGTCC...TTGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | TACTCTCATGAACTTCAGTCCAACAAGAAAGAATTAGCAGTCATTAAGATTGAGAGACCTATCCCAGCTTaGCCCACGATCCATGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: YSHELQSNKKELAVIKIERPIPA*PTIHDN Trigger: ATTGTCATGGATCGTGGGTCAAGCTGGGATAGGTCT...CTCAATCTTAATGACTGCTAATTCTTTCTTGTTGGACTGAAGTTCATGAGAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR GCA 90 bp | TACTCTCATGAACTTCAGTCCAACAAGAAAGAATTAGCAGTCATTAAGATTGAGCTTCTGGGGCCCATATaGACATGGCCACAGATCATT | + |
|
Preference number: 4 (lower is better) Translates to: YSHELQSNKKELAVIKIELLGPI*TWPQII Trigger: AATGATCTGTGGCCATGTGCATATGGGCCCCAGAAG...CTCAATCTTAATGACTGCTAATTCTTTCTTGTTGGACTGAAGTTCATGAGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | CTCCACTTCCTTTATTGCAGTAACTTCTGTACAAAGCAGCAACCGCAATGCTCATTACTACCACATCCTTaGTACCAGGTGATTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHFLYCSNFCTKQQPQCSLLPHP*YQVIFL Trigger: AAGAAAAATCACCTGGTACCAAGGATGTGGTAGTAA...TGAGCATTGCGGTTGCTGCTTTGTACAGAAGTTACTGCAATAAAGGAAGTGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCAGGAATACTGAAAAGTTaGTTAAGGCATACGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLATVMVVFKGGNLLLTSGILKS*LRHTMQ Trigger: TTGCATCGTATGCCTTAATCAACTTTTCAGTATTCC...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCAGCAAGTATCTTGATCTaGCTTTTTACTGTAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLATVMVVFKGGNLLLTSASILI*LFTVIH Trigger: GTGGATTACAGTAAAAAGTCAGATCAAGATACTTGC...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR GCA 90 bp | AGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACAAAGTCAAAGTTTAGTTTaGAGGCTGCAGAAGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SALADKVKRTNWQFSLTQSQSLV*RLQKYS Trigger: ACTGTACTTCTGCAGCCTGCAAACTAAACTTTGACT...TTGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR GCA 90 bp | GAGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACATATGCAACAAAGAATTaGTCCAATAAGGGAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ECISRQGQTHKLAVFFNTYATKN*SNKGDP Trigger: TGGATCTCCCTTATTGGAGCAATTCTTTGTTGCATA...TGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | TACTCTCATGAACTTCAGTCCAACAAGAAAGAATTAGCAGTCATTAAGATTGAGGCAGGTAGTAGGTGTTaGTGTGGGTGTCATAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: YSHELQSNKKELAVIKIEAGSRC*CGCHSS Trigger: ACTACTATGACACCCACACCAACACCTACTACCTGC...CTCAATCTTAATGACTGCTAATTCTTTCTTGTTGGACTGAAGTTCATGAGAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR GCA 90 bp | GAGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACATTTCACCAGATGATTTaGAAGTATCTTGATCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: ECISRQGQTHKLAVFFNTFHQMI*KYLDLT Trigger: AGTCAGATCAAGATACTTGCAAATCATCTGGTGAAA...TGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | TACTCTCATGAACTTCAGTCCAACAAGAAAGAATTAGCAGTCATTAAGATTGAGCTAAGAGTGTTCCTTTaGGTATGGCTGACTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YSHELQSNKKELAVIKIELRVFL*VWLTED Trigger: ATCCTCAGTCAGCCATACCCAAAGGAACACTCTTAG...CTCAATCTTAATGACTGCTAATTCTTTCTTGTTGGACTGAAGTTCATGAGAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR TCA 90 bp | ATGTTTTTAGAAAATCCTTCCTTGAAGCTGAGAAACATCACACTGACAACTGTATCCTTACATAGAGCCTaGAATATTTTGGGAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: MFLENPSLKLRNITLTTVSLHRA*NILGAL Trigger: GAGTGCTCCCAAAATATTTCAGGCTCTATGTAAGGA...TACAGTTGTCAGTGTGATGTTTCTCAGCTTCAAGGAAGGATTTTCTAAAAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | ATGTTTTTAGAAAATCCTTCCTTGAAGCTGAGAAACATCACACTGACAACTGTACATTACAAGGCACTGTaGTCTGAAGTTTTTCACATG | + |
|
Preference number: 4 (lower is better) Translates to: MFLENPSLKLRNITLTTVHYKAL*SEVFHM Trigger: CATGTGAAAAACTTCAGACCACAGTGCCTTGTAATG...TACAGTTGTCAGTGTGATGTTTCTCAGCTTCAAGGAAGGATTTTCTAAAAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | TACTCTCATGAACTTCAGTCCAACAAGAAAGAATTAGCAGTCATTAAGATTGAGAAACATCTGGAAAGCTaGGTAGATATTGTCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: YSHELQSNKKELAVIKIEKHLES*VDIVLT Trigger: TGTAAGGACAATATCTACCCAGCTTTCCAGATGTTT...CTCAATCTTAATGACTGCTAATTCTTTCTTGTTGGACTGAAGTTCATGAGAGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CCA 90 bp | TACTCTCATGAACTTCAGTCCAACAAGAAAGAATTAGCAGTCATTAAGATTGAGATCGCTCTCCGGTCATaGTCTATTCTGTTTATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YSHELQSNKKELAVIKIEIALRS*SILFIF Trigger: AAAAATAAACAGAATAGACCATGACCGGAGAGCGAT...CTCAATCTTAATGACTGCTAATTCTTTCTTGTTGGACTGAAGTTCATGAGAGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS CCA 90 bp | CGCACCCCGCCGCCAGCCTGCCTCCCAGCCGTAGTAGCATCCTCTTaGCCGGAGGGCACGGCCGTGCCGGGCAGGTCCACCCCGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RTPPPACLPAVVASS*PEGTAVPGRSTPAA Trigger: CGCCGCCGGGGTGGACCTGCCCGGCACGGCCGTGCCCTCCGGCCAAGAGGATGCTACTACGGCTGGGAGGCAGGCTGGCGGCGGGGTGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS CCA 90 bp | GCCCGCCCGGCGTTCTCGGAAACCGGGTCCACCTGGAAGCGGCTCTaGCTGGGGGTGGGCCCCAGAGGTCTGCCCAGCCCATCGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ARPAFSETGSTWKRL*LGVGPRGLPSPSPA Trigger: GGCGGGCGATGGGCTGGGCAGACCTCTGGGGCCCACCCCCAGCCAGAGCCGCTTCCAGGTGGACCCGGTTTCCGAGAACGCCGGGCGGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS GCA 90 bp | CCGGGTCCACGAAGTTCACGCGGAAGCGGCCCTTGGCTTCCTCGCTaGCCTTGGCCACGCCGCTCTCACCGCCGGCTTTCCCGGCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PGPRSSRGSGPWLPR*PWPRRSHRRLSRPR Trigger: CCGCGGCCGGGAAAGCCGGCGGTGAGAGCGGCGTGGCCAAGGGCAGCGAGGAAGCCAAGGGCCGCTTCCGCGTGAACTTCGTGGACCCGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS CCA 90 bp | CCACGAAGTTCACGCGGAAGCGGCCCTTGGCTTCCTCGCTGCCCTTaGCCACGCCGCTCTCACCGCCGGCTTTCCCGGCCGCGGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PRSSRGSGPWLPRCP*PRRSHRRLSRPRGS Trigger: AGACCCCCGCGGCCGGGAAAGCCGGCGGTGAGAGCGGCGTGGCCAAGGGCAGCGAGGAAGCCAAGGGCCGCTTCCGCGTGAACTTCGTGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS CCA 90 bp | TGCCCTCGCTCAGCACCGTGTCCCCGCCGTTCTGGAAGCTCACGTTaGGCCCGTCGCCACCGACCCCCGCCGCATCCGACAGGCTGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: CPRSAPCPRRSGSSR*ARRHRPPPHPTGCR Trigger: ACGACAGCCTGTCGGATGCGGCGGGGGTCGGTGGCGACGGGCCCAACGTGAGCTTCCAGAACGGCGGGGACACGGTGCTGAGCGAGGGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS CCA 90 bp | CCTCAAAAGGTTCCTTTTCCAGCTCATCGTGGAGCTCTGCCAGGCTaGGCCGGAGCAGCTTCTCGCCCAGCTGCGCGGCCGTGTGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: PQKVPFPAHRGALPG*AGAASRPAARPCAG Trigger: ACCGGCACACGGCCGCGCAGCTGGGCGAGAAGCTGCTCCGGCCCAGCCTGGCAGAGCTCCACGATGAGCTGGAAAAGGAACCTTTTGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS GCA 90 bp | AAAGCCATCCTCAAAAGGTTCCTTTTCCAGCTCATCGTGGAGCTCTaGCAGGCTGGGCCGGAGCAGCTTCTCGCCCAGCTGCGCGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: KAILKRFLFQLIVEL*QAGPEQLLAQLRGR Trigger: ACGGCCGCGCAGCTGGGCGAGAAGCTGCTCCGGCCCAGCCTGGCAGAGCTCCACGATGAGCTGGAAAAGGAACCTTTTGAGGATGGCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | TTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTGCATTAGCAGACAAGGTCACGCGGAAGCGGCCCTaGGCTTCCTCGCTGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FRQHMCTCTLSSALADKVTRKRP*ASSLPL Trigger: CAAGGGCAGCGAGGAAGCCAAGGGCCGCTTCCGCGT...GACCTTGTCTGCTAATGCACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | GAGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACATTCTGGAAGCTCACGTaGGGCCCGTCGCCACCGACC | + |
|
Preference number: 5 (lower is better) Translates to: ECISRQGQTHKLAVFFNTFWKLT*GPSPPT Trigger: GGTCGGTGGCGACGGGCCCAACGTGAGCTTCCAGAA...TGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCAACCGCGTCCATGGTGTaGTGGCCGAAGGTGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLATVMVVFKGGNLLLTSTASMV*WPKVRR Trigger: CCTGCGCACCTTCGGCCACAACACCATGGACGCGGT...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS TCA 90 bp | TGGTCTGAAGTTTTTCACATGGTCCTCCACCCCAGAAAGACGGATTaGATGCTGCAGTGCACTGAGGTAAGTCAGCGCTTGTGTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WSEVFHMVLHPRKTD*MLQCTEVSQRLCGG Trigger: TCCTCCACACAAGCGCTGACTTACCTCAGTGCACTGCAGCATTCAATCCGTCTTTCTGGGGTGGAGGACCATGTGAAAAACTTCAGACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | GCTTTCAGGATAGCACGTGTGCACATGCGCGCTGTCTGTCTGCATATAAAGCTTGCACAATCTGAGCCTTaGCTTCCCACTCCATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AFRIARVHMRAVCLHIKLAQSEP*LPTPFQ Trigger: CTGGAATGGAGTGGGAAGCAAAGGCTCAGATTGTGC...AAGCTTTATATGCAGACAGACAGCGCGCATGTGCACACGTGCTATCCTGAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS CCA 90 bp | GGAGAACCTGTCATTACAAGGCACTGTGGTCTGAAGTTTTTCACATaGTCCTCCACCCCAGAAAGACGGATTGAATGCTGCAGTGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GEPVITRHCGLKFFT*SSTPERRIECCSAL Trigger: CAGTGCACTGCAGCATTCAATCCGTCTTTCTGGGGTGGAGGACCATGTGAAAAACTTCAGACCACAGTGCCTTGTAATGACAGGTTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | TACTCTCATGAACTTCAGTCCAACAAGAAAGAATTAGCAGTCATTAAGATTGAGGCTTCCTCGCTGCCCTaGGCCACGCCGCTCTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: YSHELQSNKKELAVIKIEASSLP*ATPLSP Trigger: CGGTGAGAGCGGCGTGGCCAAGGGCAGCGAGGAAGC...CTCAATCTTAATGACTGCTAATTCTTTCTTGTTGGACTGAAGTTCATGAGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS TCA 90 bp | TTCAGATTTATAGCCAAAGAAACCCTTGGGCTTCTTGCTCTCCAGTaGGATAAACGTCCCTATGACGAAGTCGGCGATGGCCAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FRFIAKETLGLLALQ*DKRPYDEVGDGQEK Trigger: CTTCTCCTGGCCATCGCCGACTTCGTCATAGGGACGTTTATCTCACTGGAGAGCAAGAAGCCCAAGGGTTTCTTTGGCTATAAATCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS CCA 90 bp | ATATTTTGGGAGCACTCACAAGAGATGCTAGTGCTGACGAGAGCGTaGCTGAAAAGATCCCTGCAGAGATCAAGGGTGCAAATCCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: IFWEHSQEMLVLTRA*LKRSLQRSRVQILT Trigger: TGTCAGGATTTGCACCCTTGATCTCTGCAGGGATCTTTTCAGCCACGCTCTCGTCAGCACTAGCATCTCTTGTGAGTGCTCCCAAAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | GCTTTCAGGATAGCACGTGTGCACATGCGCGCTGTCTGTCTGCATATAAAGCTTCCACAGCATCTCTGGTaGGAGTACTTTCTTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AFRIARVHMRAVCLHIKLPQHLW*EYFLLH Trigger: ATGGAGAAGAAAGTACTCCAACCAGAGATGCTGTGG...AAGCTTTATATGCAGACAGACAGCGCGCATGTGCACACGTGCTATCCTGAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | GCTTTCAGGATAGCACGTGTGCACATGCGCGCTGTCTGTCTGCATATAAAGCTTAAACCCTTGGGCTTCTaGCTCTCCAGTGAGATAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AFRIARVHMRAVCLHIKLKPLGF*LSSEIN Trigger: GTTTATCTCACTGGAGAGCAAGAAGCCCAAGGGTTT...AAGCTTTATATGCAGACAGACAGCGCGCATGTGCACACGTGCTATCCTGAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | CTGTCTGCATATAAAGCTTTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTCATCTCTTTCATAGCTaGTCTTCTGGGGCCCATATG | + |
|
Preference number: 5 (lower is better) Translates to: LSAYKAFRQHMCTCTLSSHLFHS*SSGAHM Trigger: CATATGGGCCCCAGAAGACAAGCTATGAAAGAGATG...ACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAAAGCTTTATATGCAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS TCA 90 bp | ACAGTGGCCATTGCTATTACGACGACAGAGAGACCTATCCCAGCTTaGCCCACGATCCATGACAATCTAATAAAGAGCATCACACCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TVAIAITTTERPIPA*PTIHDNLIKSITPQ Trigger: TTGGGGTGTGATGCTCTTTATTAGATTGTCATGGATCGTGGGTCAAGCTGGGATAGGTCTCTCTGTCGTCGTAATAGCAATGGCCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS TCA 90 bp | ATAGTACGCTCCTCCTCCTCTCACGAACCCATTGGTAGCTATTGCTaGAGTAGACAATCCTGTGATAGTTGTCACAACAGTGGCCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: IVRSSSSHEPIGSYC*SRQSCDSCHNSGHC Trigger: GCAATGGCCACTGTTGTGACAACTATCACAGGATTGTCTACTTCAGCAATAGCTACCAATGGGTTCGTGAGAGGAGGAGGAGCGTACTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS GCA 90 bp | CTTGATCCAGCCAAACTTTACAACTCCTTTACTCTCGGCAGTGTATaGGACCACAGCATCTCTGGTTGGAGTACTTTCTTCTCCATTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LDPAKLYNSFTLGSV*DHSISGWSTFFSIR Trigger: GCGAATGGAGAAGAAAGTACTCCAACCAGAGATGCTGTGGTCGCATACACTGCCGAGAGTAAAGGAGTTGTAAAGTTTGGCTGGATCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS CCA 90 bp | AACTCCTTTACTCTCGGCAGTGTATGCGACCACAGCATCTCTGGTTaGAGTACTTTCTTCTCCATTCGCAAAGCCATCCTCAAAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSFTLGSVCDHSISG*STFFSIRKAILKRF Trigger: GAACCTTTTGAGGATGGCTTTGCGAATGGAGAAGAAAGTACTCCAACCAGAGATGCTGTGGTCGCATACACTGCCGAGAGTAAAGGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | CTGTCTGCATATAAAGCTTTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTCGGACTAATACACCCTaGATCCAGCCAAACTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: LSAYKAFRQHMCTCTLSSRTNTP*IQPNFT Trigger: TGTAAAGTTTGGCTGGATCAAGGGTGTATTAGTCCG...ACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAAAGCTTTATATGCAGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | CTGTCTGCATATAAAGCTTTCAGGCAGCACATGTGCACATGCACGCTGTCGAGTGCCATCCTGGAGATTTaGCAAGTGATGCATGGAATA | + |
|
Preference number: 5 (lower is better) Translates to: LSAYKAFRQHMCTCTLSSAILEI*QVMHGI Trigger: TATTCCATGCATCACTTGCAAAATCTCCAGGATGGC...ACTCGACAGCGTGCATGTGCACATGTGCTGCCTGAAAGCTTTATATGCAGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS CCA 90 bp | TTACAACTCCTTTACTCTCGGCAGTGTATGCGACCACAGCATCTCTaGTTGGAGTACTTTCTTCTCCATTCGCAAAGCCATCCTCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LQLLYSRQCMRPQHL*LEYFLLHSQSHPQK Trigger: CTTTTGAGGATGGCTTTGCGAATGGAGAAGAAAGTACTCCAACCAGAGATGCTGTGGTCGCATACACTGCCGAGAGTAAAGGAGTTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | CTCCACTTCCTTTATTGCAGTAACTTCTGTACAAAGCAGCAACCGCAATGCTCACCAGGACAAGTGTGTTaGGCTTCATACGACCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LHFLYCSNFCTKQQPQCSPGQVC*ASYDQV Trigger: GACTTGGTCGTATGAAGCCAAACACACTTGTCCTGG...TGAGCATTGCGGTTGCTGCTTTGTACAGAAGTTACTGCAATAAAGGAAGTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS GCA 90 bp | TCCAGCAGCCTGCATCAAGTATTGTGCACCTTCTCGCAAGTCATCTaGGTGAACCGGAGCATAGAAAGCCTTCATTTTGTTTTTAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSLHQVLCTFSQVI*VNRSIESLHFVFNE Trigger: CTCATTAAAAACAAAATGAAGGCTTTCTATGCTCCGGTTCACGCAGATGACTTGCGAGAAGGTGCACAATACTTGATGCAGGCTGCTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCATCAACAGTGGCTGAGTaGGAGTCTTGCCATCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLATVMVVFKGGNLLLTSSTVAE*ESCHPL Trigger: AAGAGGATGGCAAGACTCCAACTCAGCCACTGTTGA...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | GCTTTCAGGATAGCACGTGTGCACATGCGCGCTGTCTGTCTGCATATAAAGCTTTGGAATACTGAAAAGTaGATTAAGGCATACGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: AFRIARVHMRAVCLHIKLWNTEK*IKAYDA Trigger: TGCATCGTATGCCTTAATCAACTTTTCAGTATTCCA...AAGCTTTATATGCAGACAGACAGCGCGCATGTGCACACGTGCTATCCTGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | AGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACAATCACAACAGTGGCCATaGCTATTACGACGACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SALADKVKRTNWQFSLTQSQQWP*LLRRQR Trigger: TCTCTGTCGTCGTAATAGCAATGGCCACTGTTGTGA...TTGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | AGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACAACCTCTCACGAACCCATaGGTAGCTATTGCTGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SALADKVKRTNWQFSLTQPLTNP*VAIAEV Trigger: TACTTCAGCAATAGCTACCAATGGGTTCGTGAGAGG...TTGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCAATGGTATCATTAACATaGCCAGTGGCATCCCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: VLATVMVVFKGGNLLLTSMVSLT*PVASRT Trigger: TGTTCGGGATGCCACTGGCAATGTTAATGATACCAT...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | TACTCTCATGAACTTCAGTCCAACAAGAAAGAATTAGCAGTCATTAAGATTGAGGAGGTAAGTCAGCGCTaGTGTGGAGGATCCCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: YSHELQSNKKELAVIKIEEVSQR*CGGSPV Trigger: AACTGGGGATCCTCCACACAAGCGCTGACTTACCTC...CTCAATCTTAATGACTGCTAATTCTTTCTTGTTGGACTGAAGTTCATGAGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | ATGTTTTTAGAAAATCCTTCCTTGAAGCTGAGAAACATCACACTGACAACTGTAGCAACGGCCACCGCATaGGCAAAAGCAAAGATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: MFLENPSLKLRNITLTTVATATA*AKAKIK Trigger: CTTGATCTTTGCTTTTGCCAATGCGGTGGCCGTTGC...TACAGTTGTCAGTGTGATGTTTCTCAGCTTCAAGGAAGGATTTTCTAAAAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCAAAGTCAAAGTTTAGTTaGCAGGCTGCAGAAGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: VLATVMVVFKGGNLLLTSKSKFS*QAAEVQ Trigger: CTGTACTTCTGCAGCCTGCAAACTAAACTTTGACTT...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | GTGTTAGCCACCGTAATGGTAGTTTTTAAAGGTGGAAACCTGCTGCTAACATCATCGCTGATATCTGGCTaGATCAATGGACATCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VLATVMVVFKGGNLLLTSSLISG*INGHLF Trigger: AAAGAGATGTCCATTGATCAAGCCAGATATCAGCGA...TGATGTTAGCAGCAGGTTTCCACCTTTAAAAACTACCATTACGGTGGCTAACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS GCA 90 bp | TGCTCATCACCTGAAAGTTGTTCATTAGCCCGTAAGAACAAGTATTaGTCTCACAATAAGAGAAGTCAAAGTTTAGTTTGCAGGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CSSPESCSLARKNKY*SHNKRSQSLVCRLQ Trigger: CTGCAGCCTGCAAACTAAACTTTGACTTCTCTTATTGTGAGAGCAATACTTGTTCTTACGGGCTAATGAACAACTTTCAGGTGATGAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
||
| CDS-3UTR CAA 90 bp | TACTCTCATGAACTTCAGTCCAACAAGAAAGAATTAGCAGTCATTAAGATTGAGCAAAGATCAAGCCAATaGCACCACCAAATTCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YSHELQSNKKELAVIKIEQRSSQ*HHQIPA Trigger: GGCCGGAATTTGGTGGTGCAATTGGCTTGATCTTTG...CTCAATCTTAATGACTGCTAATTCTTTCTTGTTGGACTGAAGTTCATGAGAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR CAA 90 bp | TACTCTCATGAACTTCAGTCCAACAAGAAAGAATTAGCAGTCATTAAGATTGAGAGCCTGCATCAAGTATaGTGCACCTTCTCGCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: YSHELQSNKKELAVIKIESLHQV*CTFSQV Trigger: GACTTGCGAGAAGGTGCACAATACTTGATGCAGGCT...CTCAATCTTAATGACTGCTAATTCTTTCTTGTTGGACTGAAGTTCATGAGAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS-3UTR CAA 90 bp | GAGTGCATTAGCAGACAAGGTCAAACGCACAAACTGGCAGTTTTCTTTAACACATTTACTACCACATCCTaGGTACCAGGTGATTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: ECISRQGQTHKLAVFFNTFTTTS*VPGDFS Trigger: AGAAAAATCACCTGGTACCAAGGATGTGGTAGTAAA...TGTGTTAAAGAAAACTGCCAGTTTGTGCGTTTGACCTTGTCTGCTAATGCACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CCA 90 bp | TATTTGAATGCAGGACGCCATCCTGGAGATTTTGCAAGTGATGCATaGAATACTGAAAAGTTGATTAAGGCATACGATGCAAGGAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: YLNAGRHPGDFASDA*NTEKLIKAYDARKK Trigger: TTTCTTCCTTGCATCGTATGCCTTAATCAACTTTTCAGTATTCCATGCATCACTTGCAAAATCTCCAGGATGGCGTCCTGCATTCAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CCA 90 bp | TCTATCCGGAATTTACTCAATAAAGTAGCCATCGCTCTCCGGTCATaGTCTATTCTGTTTATTTTTCCACCAATGAATACTCGGATCTTA | + |
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Preference number: 5 (lower is better) Translates to: SIRNLLNKVAIALRS*SILFIFPPMNTRIL Trigger: TAAGATCCGAGTATTCATTGGTGGAAAAATAAACAGAATAGACCATGACCGGAGAGCGATGGCTACTTTATTGAGTAAATTCCGGATAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS GCA 90 bp | CGTGCGACTGGAAGACTCATGACAATAATGTTAGCTGTGCTTGAATaGTCCTTTAATAATTCATTTAACCTGATCTGTCGATATGTCTTA | + |
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Preference number: 5 (lower is better) Translates to: RATGRLMTIMLAVLE*SFNNSFNLICRYVL Trigger: TAAGACATATCGACAGATCAGGTTAAATGAATTATTAAAGGAGCATTCAAGCACAGCTAACATTATTGTCATGAGTCTTCCAGTCGCACG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS TCA 90 bp | TCTTCTTTCATCTTATCTGCAATGTCCTGTTCTTTATCATCTTCGTaGAGTCTGTACGGCTCGATCATGTCATCAAAAGCAATAATATTT | + |
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Preference number: 5 (lower is better) Translates to: SSFILSAMSCSLSSS*SLYGSIMSSKAIIF Trigger: AAATATTATTGCTTTTGATGACATGATCGAGCCGTACAGACTTCACGAAGATGATAAAGAACAGGACATTGCAGATAAGATGAAAGAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CAA 90 bp | GCGCACCCCGCCGCCAGCCTGCCTCCCAGCCGTAGTAGCATCCTCTaGGCCGGAGGGCACGGCCGTGCCGGGCAGGTCCACCCCGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: AHPAASLPPSRSSIL*AGGHGRAGQVHPGG Trigger: GCCGCCGGGGTGGACCTGCCCGGCACGGCCGTGCCCTCCGGCCAAGAGGATGCTACTACGGCTGGGAGGCAGGCTGGCGGCGGGGTGCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CCA 72 bp | GCGGCCCGCCCGGCGTTCTCGGAAACCGGGTCCACCTaGAAGCGGCTCTGGCTGGGGGTGGGCCCCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: AARPAFSETGST*KRLWLGVGPRG Trigger: ACCTCTGGGGCCCACCCCCAGCCAGAGCCGCTTCCAGGTGGACCCGGTTTCCGAGAACGCCGGGCGGGCCGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CCA 72 bp | CCGCCAGCCTGCCTCCCAGCCGTAGTAGCATCCTCTTaGCCGGAGGGCACGGCCGTGCCGGGCAGGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: PPACLPAVVASS*PEGTAVPGRST Trigger: GGTGGACCTGCCCGGCACGGCCGTGCCCTCCGGCCAAGAGGATGCTACTACGGCTGGGAGGCAGGCTGGCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CCA 72 bp | TCACGCGGAAGCGGCCCTTGGCTTCCTCGCTGCCCTTaGCCACGCCGCTCTCACCGCCGGCTTTCCCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: SRGSGPWLPRCP*PRRSHRRLSRP Trigger: CGGCCGGGAAAGCCGGCGGTGAGAGCGGCGTGGCCAAGGGCAGCGAGGAAGCCAAGGGCCGCTTCCGCGTGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CAA 72 bp | GCCGCCAGCCTGCCTCCCAGCCGTAGTAGCATCCTCTaGGCCGGAGGGCACGGCCGTGCCGGGCAGGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: AASLPPSRSSIL*AGGHGRAGQVH Trigger: GTGGACCTGCCCGGCACGGCCGTGCCCTCCGGCCAAGAGGATGCTACTACGGCTGGGAGGCAGGCTGGCGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CAA 90 bp | TCCACGAAGTTCACGCGGAAGCGGCCCTTGGCTTCCTCGCTGCCCTaGGCCACGCCGCTCTCACCGCCGGCTTTCCCGGCCGCGGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: STKFTRKRPLASSLP*ATPLSPPAFPAAGV Trigger: GACCCCCGCGGCCGGGAAAGCCGGCGGTGAGAGCGGCGTGGCCAAGGGCAGCGAGGAAGCCAAGGGCCGCTTCCGCGTGAACTTCGTGGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CAA 90 bp | CTGCCCTCGCTCAGCACCGTGTCCCCGCCGTTCTGGAAGCTCACGTaGGGCCCGTCGCCACCGACCCCCGCCGCATCCGACAGGCTGTCG | + |
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Preference number: 6 (lower is better) Translates to: LPSLSTVSPPFWKLT*GPSPPTPAASDRLS Trigger: CGACAGCCTGTCGGATGCGGCGGGGGTCGGTGGCGACGGGCCCAACGTGAGCTTCCAGAACGGCGGGGACACGGTGCTGAGCGAGGGCAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CAA 72 bp | CTCAGCACCGTGTCCCCGCCGTTCTGGAAGCTCACGTaGGGCCCGTCGCCACCGACCCCCGCCGCATCCGAC | + |
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Preference number: 6 (lower is better) Translates to: LSTVSPPFWKLT*GPSPPTPAASD Trigger: GTCGGATGCGGCGGGGGTCGGTGGCGACGGGCCCAACGTGAGCTTCCAGAACGGCGGGGACACGGTGCTGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CCA 72 bp | TCAGCACCGTGTCCCCGCCGTTCTGGAAGCTCACGTTaGGCCCGTCGCCACCGACCCCCGCCGCATCCGACA | + |
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Preference number: 6 (lower is better) Translates to: SAPCPRRSGSSR*ARRHRPPPHPT Trigger: TGTCGGATGCGGCGGGGGTCGGTGGCGACGGGCCCAACGTGAGCTTCCAGAACGGCGGGGACACGGTGCTGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS GCA 72 bp | CGAAGTTCACGCGGAAGCGGCCCTTGGCTTCCTCGCTaGCCTTGGCCACGCCGCTCTCACCGCCGGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: RSSRGSGPWLPR*PWPRRSHRRLS Trigger: GGAAAGCCGGCGGTGAGAGCGGCGTGGCCAAGGGCAGCGAGGAAGCCAAGGGCCGCTTCCGCGTGAACTTCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CCA 72 bp | GTTCCTTTTCCAGCTCATCGTGGAGCTCTGCCAGGCTaGGCCGGAGCAGCTTCTCGCCCAGCTGCGCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: VPFPAHRGALPG*AGAASRPAARP Trigger: CGGCCGCGCAGCTGGGCGAGAAGCTGCTCCGGCCCAGCCTGGCAGAGCTCCACGATGAGCTGGAAAAGGAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS GCA 72 bp | CTCAAAAGGTTCCTTTTCCAGCTCATCGTGGAGCTCTaGCAGGCTGGGCCGGAGCAGCTTCTCGCCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LKRFLFQLIVEL*QAGPEQLLAQL Trigger: CAGCTGGGCGAGAAGCTGCTCCGGCCCAGCCTGGCAGAGCTCCACGATGAGCTGGAAAAGGAACCTTTTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS TCA 72 bp | CCACCCCAGAAAGACGGATTGAATGCTGCAGTGCACTaGGGTAAGTCAGCGCTTGTGTGGAGGATCCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: PPQKDGLNAAVH*GKSALVWRIPS Trigger: ACTGGGGATCCTCCACACAAGCGCTGACTTACCTCAGTGCACTGCAGCATTCAATCCGTCTTTCTGGGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS GCA 72 bp | CATACGACCAAGTCCAGCAGCCTGCATCAAGTATTGTaGACCTTCTCGCAAGTCATCTGCGTGAACCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: HTTKSSSLHQVL*TFSQVICVNRS Trigger: GCTCCGGTTCACGCAGATGACTTGCGAGAAGGTGCACAATACTTGATGCAGGCTGCTGGACTTGGTCGTATG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CCA 72 bp | TCGAGAGAGCTTCTAACCAAGCCATATACAGAGCACTaGACACAGCGCCTTTCCGTGCGACTGGAAGACTCA | + |
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Preference number: 6 (lower is better) Translates to: SRELLTKPYTEH*TQRLSVRLEDS Trigger: TGAGTCTTCCAGTCGCACGGAAAGGCGCTGTGTCCAGTGCTCTGTATATGGCTTGGTTAGAAGCTCTCTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS TCA 72 bp | GTTTTTCACATGGTCCTCCACCCCAGAAAGACGGATTaGATGCTGCAGTGCACTGAGGTAAGTCAGCGCTTG | + |
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Preference number: 6 (lower is better) Translates to: VFHMVLHPRKTD*MLQCTEVSQRL Trigger: CAAGCGCTGACTTACCTCAGTGCACTGCAGCATTCAATCCGTCTTTCTGGGGTGGAGGACCATGTGAAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS GCA 72 bp | AGCCATATACAGAGCACTGGACACAGCGCCTTTCCGTaGGACTGGAAGACTCATGACAATAATGTTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SHIQSTGHSAFP*DWKTHDNNVSC Trigger: ACAGCTAACATTATTGTCATGAGTCTTCCAGTCGCACGGAAAGGCGCTGTGTCCAGTGCTCTGTATATGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CCA 72 bp | CTTTACTCTCGGCAGTGTATGCGACCACAGCATCTCTaGTTGGAGTACTTTCTTCTCCATTCGCAAAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LYSRQCMRPQHL*LEYFLLHSQSH Trigger: ATGGCTTTGCGAATGGAGAAGAAAGTACTCCAACCAGAGATGCTGTGGTCGCATACACTGCCGAGAGTAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CCA 72 bp | GTCATTACAAGGCACTGTGGTCTGAAGTTTTTCACATaGTCCTCCACCCCAGAAAGACGGATTGAATGCTGC | + |
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Preference number: 6 (lower is better) Translates to: VITRHCGLKFFT*SSTPERRIECC Trigger: GCAGCATTCAATCCGTCTTTCTGGGGTGGAGGACCATGTGAAAAACTTCAGACCACAGTGCCTTGTAATGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CAA 90 bp | CAACTCCTTTACTCTCGGCAGTGTATGCGACCACAGCATCTCTGGTaGGAGTACTTTCTTCTCCATTCGCAAAGCCATCCTCAAAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: QLLYSRQCMRPQHLW*EYFLLHSQSHPQKV Trigger: AACCTTTTGAGGATGGCTTTGCGAATGGAGAAGAAAGTACTCCAACCAGAGATGCTGTGGTCGCATACACTGCCGAGAGTAAAGGAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CAA 90 bp | GCAGAAGTACAGTTTGTCAGCTCTGTTGTAATGGTATCATTAACATaGCCAGTGGCATCCCGAACAACACACGAACCCACAGACACTGCA | + |
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Preference number: 6 (lower is better) Translates to: AEVQFVSSVVMVSLT*PVASRTTHEPTDTA Trigger: TGCAGTGTCTGTGGGTTCGTGTGTTGTTCGGGATGCCACTGGCAATGTTAATGATACCATTACAACAGAGCTGACAAACTGTACTTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS TCA 72 bp | AGTTTGGAGAACCTGTCATTACAAGGCACTGTGGTCTaGAGTTTTTCACATGGTCCTCCACCCCAGAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: SLENLSLQGTVV*SFSHGPPPQKD Trigger: GTCTTTCTGGGGTGGAGGACCATGTGAAAAACTTCAGACCACAGTGCCTTGTAATGACAGGTTCTCCAAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS GCA 72 bp | GCCAAACTTTACAACTCCTTTACTCTCGGCAGTGTATaGGACCACAGCATCTCTGGTTGGAGTACTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: AKLYNSFTLGSV*DHSISGWSTFF Trigger: GAAGAAAGTACTCCAACCAGAGATGCTGTGGTCGCATACACTGCCGAGAGTAAAGGAGTTGTAAAGTTTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS GCA 72 bp | AGACAATCCTGTGATAGTTGTCACAACAGTGGCCATTaGTATTACGACGACAGAGAGACCTATCCCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: RQSCDSCHNSGH*YYDDRETYPSL Trigger: CAAGCTGGGATAGGTCTCTCTGTCGTCGTAATAGCAATGGCCACTGTTGTGACAACTATCACAGGATTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS TCA 72 bp | TCCTCCTCCTCTCACGAACCCATTGGTAGCTATTGCTaGAGTAGACAATCCTGTGATAGTTGTCACAACAGT | + |
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Preference number: 6 (lower is better) Translates to: SSSSHEPIGSYC*SRQSCDSCHNS Trigger: ACTGTTGTGACAACTATCACAGGATTGTCTACTTCAGCAATAGCTACCAATGGGTTCGTGAGAGGAGGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS GCA 72 bp | CTGCATCAAGTATTGTGCACCTTCTCGCAAGTCATCTaGGTGAACCGGAGCATAGAAAGCCTTCATTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LHQVLCTFSQVI*VNRSIESLHFV Trigger: AACAAAATGAAGGCTTTCTATGCTCCGGTTCACGCAGATGACTTGCGAGAAGGTGCACAATACTTGATGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CAA 72 bp | CAGTTTGTCAGCTCTGTTGTAATGGTATCATTAACATaGCCAGTGGCATCCCGAACAACACACGAACCCACA | + |
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Preference number: 6 (lower is better) Translates to: QFVSSVVMVSLT*PVASRTTHEPT Trigger: TGTGGGTTCGTGTGTTGTTCGGGATGCCACTGGCAATGTTAATGATACCATTACAACAGAGCTGACAAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CAA 72 bp | ATATCTGGCTTGATCAATGGACATCTCTTTCATAGCTaGTCTTCTGGGGCCCATATGCACATGGCCACAGAT | + |
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Preference number: 6 (lower is better) Translates to: ISGLINGHLFHS*SSGAHMHMATD Trigger: ATCTGTGGCCATGTGCATATGGGCCCCAGAAGACAAGCTATGAAAGAGATGTCCATTGATCAAGCCAGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS TCA 72 bp | CCCAAATGTTTAACATGCAGCGGACTAATACACCCTTaGTCCAGCCAAACTTTACAACTCCTTTACTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: PKCLTCSGLIHP*SSQTLQLLYSR Trigger: CCGAGAGTAAAGGAGTTGTAAAGTTTGGCTGGATCAAGGGTGTATTAGTCCGCTGCATGTTAAACATTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS TCA 72 bp | ATTGCTATTACGACGACAGAGAGACCTATCCCAGCTTaGCCCACGATCCATGACAATCTAATAAAGAGCATC | + |
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Preference number: 6 (lower is better) Translates to: IAITTTERPIPA*PTIHDNLIKSI Trigger: GATGCTCTTTATTAGATTGTCATGGATCGTGGGTCAAGCTGGGATAGGTCTCTCTGTCGTCGTAATAGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CAA 72 bp | CCCCAAATGTTTAACATGCAGCGGACTAATACACCCTaGATCCAGCCAAACTTTACAACTCCTTTACTCTCG | + |
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Preference number: 6 (lower is better) Translates to: PQMFNMQRTNTP*IQPNFTTPLLS Trigger: CGAGAGTAAAGGAGTTGTAAAGTTTGGCTGGATCAAGGGTGTATTAGTCCGCTGCATGTTAAACATTTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS TCA 72 bp | CCAGGTGATTTTTCTTGTGAAGATAATAATTCTTCCTaGCCTTGGAGGTGTGATATATCCAGTCCTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PGDFSCEDNNSS*PWRCDISSPSF Trigger: GAAGGAAGGACTGGATATATCACACCTCCAAGGTCAGGAAGAATTATTATCTTCACAAGAAAAATCACCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS TCA 72 bp | ATCTTATCTGCAATGTCCTGTTCTTTATCATCTTCGTaGAGTCTGTACGGCTCGATCATGTCATCAAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: ILSAMSCSLSSS*SLYGSIMSSKA Trigger: TGCTTTTGATGACATGATCGAGCCGTACAGACTTCACGAAGATGATAAAGAACAGGACATTGCAGATAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS GCA 72 bp | TATTGCTCTCACAATAAGAGAAGTCAAAGTTTAGTTTaGAGGCTGCAGAAGTACAGTTTGTCAGCTCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: YCSHNKRSQSLV*RLQKYSLSALL Trigger: CAACAGAGCTGACAAACTGTACTTCTGCAGCCTGCAAACTAAACTTTGACTTCTCTTATTGTGAGAGCAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS CAA 72 bp | CATTTTGTTTTTAATGAGCCATCGCTGATATCTGGCTaGATCAATGGACATCTCTTTCATAGCTTGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: HFVFNEPSLISG*INGHLFHSLSS Trigger: AGAAGACAAGCTATGAAAGAGATGTCCATTGATCAAGCCAGATATCAGCGATGGCTCATTAAAAACAAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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| CDS GCA 72 bp | GGAAGACTCATGACAATAATGTTAGCTGTGCTTGAATaGTCCTTTAATAATTCATTTAACCTGATCTGTCGA | + |
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Preference number: 6 (lower is better) Translates to: GRLMTIMLAVLE*SFNNSFNLICR Trigger: TCGACAGATCAGGTTAAATGAATTATTAAAGGAGCATTCAAGCACAGCTAACATTATTGTCATGAGTCTTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115366.3 |
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