Pregenerated sensors for SLC11A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023030Ensembl transcript IDs: ENSMUST00000023774.12, ENSMUST00000123461.8, ENSMUST00000124324.2, ENSMUST00000136168.2, ENSMUST00000138843.8, ENSMUST00000154331.2, ENSMUST00000154676.2
Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTCACACACTGAACTCCATGTTCAGAGAGAGACTGGAGACACCTaGTGCCAACCCGTGGCCCCCACAAGCAGAAGCAGGCAGGCACTC | + |
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Preference number: 1 (lower is better) Translates to: QSHTELHVQRETGDT*CQPVAPTSRSRQAL Trigger: GAGTGCCTGCCTGCTTCTGCTTGTGGGGGCCACGGGTTGGCATCAGGTGTCTCCAGTCTCTCTCTGAACATGGAGTTCAGTGTGTGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| 3UTR TCA 90 bp | GGATACAGCCCAGGCCCACCTTGCCGGGAGAGGACTTCACACCAGTaGCACCTACTGACTTTGCAAGGTTTGGGTCCAGAGCTCCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: GYSPGPPCRERTSHQ*HLLTLQGLGPELLR Trigger: TCTCAGGAGCTCTGGACCCAAACCTTGCAAAGTCAGTAGGTGTCACTGGTGTGAAGTCCTCTCCCGGCAAGGTGGGCCTGGGCTGTATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR GCA 90 bp | TTTAAACCCCAGAAGTGCAGACACAAGCCTGAGGGACTGCACAGCTaGCACAGGCCCACTGCCTCCGAAGGGTCTCTGACCCATACGCAA | + |
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Preference number: 1 (lower is better) Translates to: FKPQKCRHKPEGLHS*HRPTASEGSLTHTQ Trigger: TTGCGTATGGGTCAGAGACCCTTCGGAGGCAGTGGGCCTGTGGCAGCTGTGCAGTCCCTCAGGCTTGTGTCTGCACTTCTGGGGTTTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| 3UTR GCA 90 bp | CCCCACCCCATCCCTGTACAAATGCAGACATCACTAGAGCATCTATaGAAGGAATTCTGCTGCCGTCAGCCTGGCCCTCAAGCACTGCAC | + |
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Preference number: 1 (lower is better) Translates to: PHPIPVQMQTSLEHL*KEFCCRQPGPQALH Trigger: GTGCAGTGCTTGAGGGCCAGGCTGACGGCAGCAGAATTCCTTGCATAGATGCTCTAGTGATGTCTGCATTTGTACAGGGATGGGGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR GCA 90 bp | CTCACAAGACAAGCTGCCGCTACTCCCCGGCCTGTCAGCTCCCAGTaGACTGAGGGGACAACTATTTCAGGTCACATAAGAACAAGGACC | + |
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Preference number: 1 (lower is better) Translates to: LTRQAAATPRPVSSQ*TEGTTISGHIRTRT Trigger: GGTCCTTGTTCTTATGTGACCTGAAATAGTTGTCCCCTCAGTGCACTGGGAGCTGACAGGCCGGGGAGTAGCGGCAGCTTGTCTTGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR TCA 90 bp | AAGACAAGCTGCCGCTACTCCCCGGCCTGTCAGCTCCCAGTGCACTaGGGGGACAACTATTTCAGGTCACATAAGAACAAGGACCAATTC | + |
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Preference number: 1 (lower is better) Translates to: KTSCRYSPACQLPVH*GDNYFRSHKNKDQF Trigger: GAATTGGTCCTTGTTCTTATGTGACCTGAAATAGTTGTCCCCTCAGTGCACTGGGAGCTGACAGGCCGGGGAGTAGCGGCAGCTTGTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR GCA 90 bp | CCATCGAGTGCGAGCCTCAGACCTCTGCTAACACACACCTTAAAATaGTTAAATTCCTCAGGACACTCAGCGGTACACATACGGGCGGCC | + |
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Preference number: 1 (lower is better) Translates to: PSSASLRPLLTHTLK*LNSSGHSAVHIRAA Trigger: GGCCGCCCGTATGTGTACCGCTGAGTGTCCTGAGGAATTTAAGCATTTTAAGGTGTGTGTTAGCAGAGGTCTGAGGCTCGCACTCGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| 3UTR CCA 90 bp | ACAGTGTGTGGAGTGTCAGCGCGTAGAGTGGGAAGAAAGGGCAGGTaGACAGACACCAACGGAACAACAGCCACAGACACACTTGATGTA | + |
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Preference number: 1 (lower is better) Translates to: TVCGVSARRVGRKGR*TDTNGTTATDTLDV Trigger: TACATCAAGTGTGTCTGTGGCTGTTGTTCCGTTGGTGTCTGTCCACCTGCCCTTTCTTCCCACTCTACGCGCTGACACTCCACACACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| 3UTR TCA 90 bp | ACTGACTTTGCAAGGTTTGGGTCCAGAGCTCCTGAGATTGCCTTCTaGGTTATCTTGGGCGTGGAATGGCAGCGCCAGAGACATGATTTG | + |
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Preference number: 1 (lower is better) Translates to: TDFARFGSRAPEIAF*VILGVEWQRQRHDL Trigger: CAAATCATGTCTCTGGCGCTGCCATTCCACGCCCAAGATAACTCAGAAGGCAATCTCAGGAGCTCTGGACCCAAACCTTGCAAAGTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR GCA 90 bp | CCTGTACAAATGCAGACATCACTAGAGCATCTATGCAAGGAATTCTaGTGCCGTCAGCCTGGCCCTCAAGCACTGCACAGGTTCAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: PVQMQTSLEHLCKEF*CRQPGPQALHRFKS Trigger: GCTTTTGAACCTGTGCAGTGCTTGAGGGCCAGGCTGACGGCAGCAGAATTCCTTGCATAGATGCTCTAGTGATGTCTGCATTTGTACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR TCA 90 bp | GGGTCTCTGACCCATACGCAACTGTCAGCTTTTACCCTGAGTCCGTaGGGAGAACTTCTCCTTTGTTCAAAAACCTTTGAACAAGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: GSLTHTQLSAFTLSP*GELLLCSKTFEQAH Trigger: GTGAGCTTGTTCAAAGGTTTTTGAACAAAGGAGAAGTTCTCCTCACGGACTCAGGGTAAAAGCTGACAGTTGCGTATGGGTCAGAGACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| 3UTR GCA 90 bp | TGCAGGCAGCACTCTCTCAGAAGAGAAAGATTCAGGGACTGTGTGTaGTCAAGATTCAACATATCAGGAAGGCTTGATATTAGCAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: CRQHSLRRERFRDCV*SRFNISGRLDISRE Trigger: TTCCCTGCTAATATCAAGCCTTCCTGATATGTTGAATCTTGAGCACACACAGTCCCTGAATCTTTCTCTTCTGAGAGAGTGCTGCCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR TCA 90 bp | ATACACACACACACACACACACATCAGTGTTTCCCAACTAACAGTTaGGTCCTAAATGCAGTCTGTGCAACAGCACATACTTGTGGCTAT | + |
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Preference number: 1 (lower is better) Translates to: IHTHTHTHQCFPTNS*VLNAVCATAHTCGY Trigger: ATAGCCACAAGTATGTGCTGTTGCACAGACTGCATTTAGGACTCAACTGTTAGTTGGGAAACACTGATGTGTGTGTGTGTGTGTGTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR GCA 90 bp | TATTTCTGGTTGGGATTAAAGCAAAAACCAAAAAGCTTCACTACCTaGACACGCGCGTTTGGAGTGTCGGTGCTTAAAGTGAAACTGATG | + |
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Preference number: 1 (lower is better) Translates to: YFWLGLKQKPKSFTT*TRAFGVSVLKVKLM Trigger: CATCAGTTTCACTTTAAGCACCGACACTCCAAACGCGCGTGTGCAGGTAGTGAAGCTTTTTGGTTTTTGCTTTAATCCCAACCAGAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTCCAGGAAGACCTGAGTTTGGGTCCCCAGCACTGTGTAAAATCTGGGCGCTGGGACCACAGTGTTaGGGCGCGAGGCCAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: CCPGRPEFGSPALCKIWALGPQC*GARPGG Trigger: TCCTCCTGGCCTCGCGCCCCAACACTGTGGTCCCAG...CGCCCAGATTTTACACAGTGCTGGGGACCCAAACTCAGGTCTTCCTGGACAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCAGGCCCACCTTGCCGGGAGAGGACTTCACACCAGTGACACCTACTGACGAGTTATCTTGGGCGTaGAATGGCAGCGCCAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: QPRPTLPGEDFTPVTPTDELSWA*NGSARD Trigger: GTCTCTGGCGCTGCCATTCCACGCCCAAGATAACTC...GTCAGTAGGTGTCACTGGTGTGAAGTCCTCTCCCGGCAAGGTGGGCCTGGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCAGGCCCACCTTGCCGGGAGAGGACTTCACACCAGTGACACCTACTGACGCCACCTTTTCAAGGTaGTGCCTAATGCTACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: QPRPTLPGEDFTPVTPTDATFSR*CLMLQG Trigger: ACCCTGTAGCATTAGGCAGCACCTTGAAAAGGTGGC...GTCAGTAGGTGTCACTGGTGTGAAGTCCTCTCCCGGCAAGGTGGGCCTGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR TCA 90 bp | GAATTCTGCTGCCGTCAGCCTGGCCCTCAAGCACTGCACAGGTTCAAAAGCTCAAACCTGCACTGCAGGTaGGCCATCATCTGTCCACAC | + |
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Preference number: 2 (lower is better) Translates to: EFCCRQPGPQALHRFKSSNLHCR*AIICPH Trigger: GTGTGGACAGATGATGGCTCACCTGCAGTGCAGGTT...TGAGCTTTTGAACCTGTGCAGTGCTTGAGGGCCAGGCTGACGGCAGCAGAATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR TCA 90 bp | GAAATGCTAGCAGGAGCGCTACAGAGGCACAGACAGCAAAGGCCATTTGTCGGCCAGGTCAGAAGTAGCTaGACTGAGGGCAGCAGTTCG | + |
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Preference number: 2 (lower is better) Translates to: EMLAGALQRHRQQRPFVGQVRSS*TEGSSS Trigger: CGAACTGCTGCCCTCAGTTCAGCTACTTCTGACCTG...GCCGACAAATGGCCTTTGCTGTCTGTGCCTCTGTAGCGCTCCTGCTAGCATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR TCA 90 bp | GAATTCTGCTGCCGTCAGCCTGGCCCTCAAGCACTGCACAGGTTCAAAAGCTCAGCTGGGAGGGACCCGTaGCCTGGTTTTGTTGGATTA | + |
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Preference number: 2 (lower is better) Translates to: EFCCRQPGPQALHRFKSSAGRDP*PGFVGL Trigger: TAATCCAACAAAACCAGGTCACGGGTCCCTCCCAGC...TGAGCTTTTGAACCTGTGCAGTGCTTGAGGGCCAGGCTGACGGCAGCAGAATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCAGGCCCACCTTGCCGGGAGAGGACTTCACACCAGTGACACCTACTGACCCTAAATGCAGTCTGTaGAACAGCACATACTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: QPRPTLPGEDFTPVTPTDPKCSL*NSTYLW Trigger: CCACAAGTATGTGCTGTTGCACAGACTGCATTTAGG...GTCAGTAGGTGTCACTGGTGTGAAGTCCTCTCCCGGCAAGGTGGGCCTGGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR CCA 90 bp | GAAATGCTAGCAGGAGCGCTACAGAGGCACAGACAGCAAAGGCCATTTGTCGGCGAACCAGCAGGGCAGTaGAGGTGTCTGCCTCTAATC | + |
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Preference number: 2 (lower is better) Translates to: EMLAGALQRHRQQRPFVGEPAGQ*RCLPLI Trigger: GATTAGAGGCAGACACCTCCACTGCCCTGCTGGTTC...GCCGACAAATGGCCTTTGCTGTCTGTGCCTCTGTAGCGCTCCTGCTAGCATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR TCA 90 bp | GAAATGCTAGCAGGAGCGCTACAGAGGCACAGACAGCAAAGGCCATTTGTCGGCCATCTTAAGCATACATaGGAGCCAGGCATGGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: EMLAGALQRHRQQRPFVGHLKHT*EPGMVD Trigger: GTCTACCATGCCTGGCTCTCATGTATGCTTAAGATG...GCCGACAAATGGCCTTTGCTGTCTGTGCCTCTGTAGCGCTCCTGCTAGCATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR GCA 90 bp | GAATTCTGCTGCCGTCAGCCTGGCCCTCAAGCACTGCACAGGTTCAAAAGCTCATCCTTAAGGAAAACCTaGACTGCAGGTGAGCCATCA | + |
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Preference number: 2 (lower is better) Translates to: EFCCRQPGPQALHRFKSSSLRKT*TAGEPS Trigger: TGATGGCTCACCTGCAGTGCAGGTTTTCCTTAAGGA...TGAGCTTTTGAACCTGTGCAGTGCTTGAGGGCCAGGCTGACGGCAGCAGAATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAAAGCCTCCTTGAAGCCACTTGCTGCCGACCTGGCAGGATCTCACAAGACAAAGATCTATGCAGGCTaGGCCTCTGACTGTGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: TKASLKPLAADLAGSHKTKIYAG*ASDCEK Trigger: TTTCTCACAGTCAGAGGCTCAGCCTGCATAGATCTT...TGTCTTGTGAGATCCTGCCAGGTCGGCAGCAAGTGGCTTCAAGGAGGCTTTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR CCA 90 bp | AGTACCTGCTGTCCAGGAAGACCTGAGTTTGGGTCCCCAGCACTGTGTAAAATCTGTTCAGAGAGAGACTaGAGACACCTGATGCCAACC | + |
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Preference number: 2 (lower is better) Translates to: STCCPGRPEFGSPALCKICSERD*RHLMPT Trigger: GGTTGGCATCAGGTGTCTCCAGTCTCTCTCTGAACA...GATTTTACACAGTGCTGGGGACCCAAACTCAGGTCTTCCTGGACAGCAGGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| 3UTR-3UTR GCA 90 bp | ACTAAAGCCTCCTTGAAGCCACTTGCTGCCGACCTGGCAGGATCTCACAAGACACAGTTGAGTCCTAAATaGAGTCTGTGCAACAGCACA | + |
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Preference number: 2 (lower is better) Translates to: TKASLKPLAADLAGSHKTQLSPK*SLCNST Trigger: TGTGCTGTTGCACAGACTGCATTTAGGACTCAACTG...TGTCTTGTGAGATCCTGCCAGGTCGGCAGCAAGTGGCTTCAAGGAGGCTTTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR CAA 90 bp | AATCACAGCACGTTCACAAGCTGTAAAAAGTTCACTAAAGCCTCCTaGAAGCCACTTGCTGCCGACCTGGCAGGATCTCACAAGACAAGC | + |
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Preference number: 2 (lower is better) Translates to: NHSTFTSCKKFTKAS*KPLAADLAGSHKTS Trigger: GCTTGTCTTGTGAGATCCTGCCAGGTCGGCAGCAAGTGGCTTCAAGGAGGCTTTAGTGAACTTTTTACAGCTTGTGAACGTGCTGTGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAAAGCCTCCTTGAAGCCACTTGCTGCCGACCTGGCAGGATCTCACAAGACAAGGTTACTGTACTGTTaGAGTACCGTTTTCAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: TKASLKPLAADLAGSHKTRLLYC*STVFSD Trigger: GTCACTGAAAACGGTACTTCAACAGTACAGTAACCT...TGTCTTGTGAGATCCTGCCAGGTCGGCAGCAAGTGGCTTCAAGGAGGCTTTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCAAGGTTTGGGTCCAGAGCTCCTGAGATTGCCTTCTGAGTTATCTTGGGCGTTAGGTCAGAAGGATTaGTGTAGGTTTGAGCACAGC | + |
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Preference number: 2 (lower is better) Translates to: LQGLGPELLRLPSELSWALGQKD*CRFEHS Trigger: GCTGTGCTCAAACCTACAGCAATCCTTCTGACCTAA...CGCCCAAGATAACTCAGAAGGCAATCTCAGGAGCTCTGGACCCAAACCTTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTCCAGGAAGACCTGAGTTTGGGTCCCCAGCACTGTGTAAAATCTGGGCGCCAAACTGGCACGTTTaGGTTCACATAAATACATAT | + |
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Preference number: 2 (lower is better) Translates to: CCPGRPEFGSPALCKIWAPNWHV*VHINTY Trigger: ATATGTATTTATGTGAACCCAAACGTGCCAGTTTGG...CGCCCAGATTTTACACAGTGCTGGGGACCCAAACTCAGGTCTTCCTGGACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| 3UTR-3UTR GCA 90 bp | TTGCAAGGTTTGGGTCCAGAGCTCCTGAGATTGCCTTCTGAGTTATCTTGGGCGTTCAGGGACTGTGTGTaGTCAAGATTCAACATATCA | + |
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Preference number: 2 (lower is better) Translates to: LQGLGPELLRLPSELSWAFRDCV*SRFNIS Trigger: TGATATGTTGAATCTTGAGCACACACAGTCCCTGAA...CGCCCAAGATAACTCAGAAGGCAATCTCAGGAGCTCTGGACCCAAACCTTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTCAGGTCACATAAGAACAAGGACCAATTCAGAGAATGCACAAAGATGGCTCCATGGTAGACGTGCCTaGAATCCCAGCACTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: ISGHIRTRTNSENAQRWLHGRRA*NPSTQE Trigger: CTCCTGAGTGCTGGGATTCCAGGCACGTCTACCATG...GAGCCATCTTTGTGCATTCTCTGAATTGGTCCTTGTTCTTATGTGACCTGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR CCA 90 bp | CAATTCAGAGAATGCACAAAGATGGCTCACAAATATAATGCCGGTAGCAGAGTTCAGAGCTTCGCAGTCTaGCCTCAGCAGGCTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: QFRECTKMAHKYNAGSRVQSFAV*PQQAFS Trigger: AGAGAAAGCCTGCTGAGGCCAGACTGCGAAGCTCTG...AACTCTGCTACCGGCATTATATTTGTGAGCCATCTTTGTGCATTCTCTGAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTCAGGTCACATAAGAACAAGGACCAATTCAGAGAATGCACAAAGATGGCTCATCTTGGGCGTGGAATaGCAGCGCCAGAGACATGAT | + |
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Preference number: 2 (lower is better) Translates to: ISGHIRTRTNSENAQRWLILGVE*QRQRHD Trigger: ATCATGTCTCTGGCGCTGCCATTCCACGCCCAAGAT...GAGCCATCTTTGTGCATTCTCTGAATTGGTCCTTGTTCTTATGTGACCTGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTCAGGTCACATAAGAACAAGGACCAATTCAGAGAATGCACAAAGATGGCTCACCAGTGACACCTACTaGCTTTGCAAGGTTTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: ISGHIRTRTNSENAQRWLTSDTY*LCKVWV Trigger: GACCCAAACCTTGCAAAGTCAGTAGGTGTCACTGGT...GAGCCATCTTTGTGCATTCTCTGAATTGGTCCTTGTTCTTATGTGACCTGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTCAGGTCACATAAGAACAAGGACCAATTCAGAGAATGCACAAAGATGGCTCGCTCTGATGGCTCCCTaGAAAGACAGACAGACTGAT | + |
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Preference number: 2 (lower is better) Translates to: ISGHIRTRTNSENAQRWLALMAP*KDRQTD Trigger: ATCAGTCTGTCTGTCTTTGCAGGGAGCCATCAGAGC...GAGCCATCTTTGTGCATTCTCTGAATTGGTCCTTGTTCTTATGTGACCTGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTATGGCGAATCTGGATACACTCTGCTCGCCCCACCCCATCCCTGTACAAATGCGATTGATAATGTATaGCTCATAAAGATCTATGCA | + |
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Preference number: 2 (lower is better) Translates to: KYGESGYTLLAPPHPCTNAIDNV*LIKIYA Trigger: TGCATAGATCTTTATGAGGCATACATTATCAATCGC...ATTTGTACAGGGATGGGGTGGGGCGAGCAGAGTGTATCCAGATTCGCCATACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTTAAAATGCTTAAATTCCTCAGGACACTCAGCGGTACACATACGGGCGGCCCTTCAAGAGTTATTTTaGGGAAGTTCATCGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: TLKCLNSSGHSAVHIRAALQELF*GSSSSE Trigger: TTCTGACGATGAACTTCCCCAAAATAACTCTTGAAG...GGCCGCCCGTATGTGTACCGCTGAGTGTCCTGAGGAATTTAAGCATTTTAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| 3UTR CAA 90 bp | GATTCAGGGACTGTGTGTGCTCAAGATTCAACATATCAGGAAGGCTaGATATTAGCAGGGAAGTTACTAACCTCAGGGCTAAAGATGAAG | + |
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Preference number: 2 (lower is better) Translates to: DSGTVCAQDSTYQEG*ILAGKLLTSGLKMK Trigger: CTTCATCTTTAGCCCTGAGGTTAGTAACTTCCCTGCTAATATCAAGCCTTCCTGATATGTTGAATCTTGAGCACACACAGTCCCTGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR CCA 90 bp | GACAGTCTGGTTGCGTTTCTTTTGACTAAAAACAAGCTACTGCCCTTGGGCAGCAACAGCACATACTTGTaGCTATGTTCACACAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: DSLVAFLLTKNKLLPLGSNSTYL*LCSHSK Trigger: TTTACTGTGTGAACATAGCCACAAGTATGTGCTGTT...GCTGCCCAAGGGCAGTAGCTTGTTTTTAGTCAAAAGAAACGCAACCAGACTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR TCA 90 bp | CAATTCAGAGAATGCACAAAGATGGCTCACAAATATAATGCCGGTAGCAGAGTTACCAAACAAAAACCCTaGCTTCAAAGGCAGCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: QFRECTKMAHKYNAGSRVTKQKP*LQRQQS Trigger: AGACTGCTGCCTTTGAAGTCAGGGTTTTTGTTTGGT...AACTCTGCTACCGGCATTATATTTGTGAGCCATCTTTGTGCATTCTCTGAATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR TCA 90 bp | CATCATAAAGTGTTTTCGGTGTTAAAGACCAAACAGGAAAGAAAACCAAACAGGTGGGTCCAGAGCTCCTaGGATTGCCTTCTGAGTTAT | + |
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Preference number: 2 (lower is better) Translates to: HHKVFSVLKTKQERKPNRWVQSS*DCLLSY Trigger: ATAACTCAGAAGGCAATCTCAGGAGCTCTGGACCCA...CCTGTTTGGTTTTCTTTCCTGTTTGGTCTTTAACACCGAAAACACTTTATGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR TCA 90 bp | CAATTCAGAGAATGCACAAAGATGGCTCACAAATATAATGCCGGTAGCAGAGTTTTCCCAACTAACAGTTaGGTCCTAAATGCAGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: QFRECTKMAHKYNAGSRVFPTNS*VLNAVC Trigger: ACAGACTGCATTTAGGACTCAACTGTTAGTTGGGAA...AACTCTGCTACCGGCATTATATTTGTGAGCCATCTTTGTGCATTCTCTGAATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR CCA 90 bp | CAATTCAGAGAATGCACAAAGATGGCTCACAAATATAATGCCGGTAGCAGAGTTTCTATAATTCAAGGATaGCGACAGTCTGGTTGCGTT | + |
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Preference number: 2 (lower is better) Translates to: QFRECTKMAHKYNAGSRVSIIQG*RQSGCV Trigger: AACGCAACCAGACTGTCGCCATCCTTGAATTATAGA...AACTCTGCTACCGGCATTATATTTGTGAGCCATCTTTGTGCATTCTCTGAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| 3UTR-3UTR TCA 90 bp | TTGTTAAGGCTCCATCATAAAGTGTTTTCGGTGTTAAAGACCAAACAGGAAAGATGGTTGCGTTTCTTTTaGCTAAAAACAAGCTACTGC | + |
|
Preference number: 2 (lower is better) Translates to: LLRLHHKVFSVLKTKQERWLRFF*LKTSYC Trigger: GCAGTAGCTTGTTTTTAGTCAAAAGAAACGCAACCA...TCTTTCCTGTTTGGTCTTTAACACCGAAAACACTTTATGATGGAGCCTTAACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR GCA 72 bp | CTTGCTGCCGACCTGGCAGGATCTCACAAGACAAGCTaGCGCTACTCCCCGGCCTGTCAGCTCCCAGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LAADLAGSHKTS*RYSPACQLPVH Trigger: GTGCACTGGGAGCTGACAGGCCGGGGAGTAGCGGCAGCTTGTCTTGTGAGATCCTGCCAGGTCGGCAGCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR GCA 72 bp | CAGAAGTGCAGACACAAGCCTGAGGGACTGCACAGCTaGCACAGGCCCACTGCCTCCGAAGGGTCTCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: QKCRHKPEGLHS*HRPTASEGSLT Trigger: GGTCAGAGACCCTTCGGAGGCAGTGGGCCTGTGGCAGCTGTGCAGTCCCTCAGGCTTGTGTCTGCACTTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| 3UTR CCA 72 bp | TTCAGAGAGAGACTGGAGACACCTGATGCCAACCCGTaGCCCCCACAAGCAGAAGCAGGCAGGCACTCGCGC | + |
|
Preference number: 3 (lower is better) Translates to: FRERLETPDANP*PPQAEAGRHSR Trigger: GCGCGAGTGCCTGCCTGCTTCTGCTTGTGGGGGCCACGGGTTGGCATCAGGTGTCTCCAGTCTCTCTCTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| 3UTR TCA 72 bp | CAGCGGTACACATACGGGCGGCCCTTAGAGACAGGGTaGGGACAGTGTGTGGAGTGTCAGCGCGTAGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: QRYTYGRPLETG*GQCVECQRVEW Trigger: CCACTCTACGCGCTGACACTCCACACACTGTCCTCACCCTGTCTCTAAGGGCCGCCCGTATGTGTACCGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| 3UTR TCA 72 bp | ACACACACACACACTGTGGTAGAGACTGGAGACACCTaGTGCCAACCCGTGGCCCCCACAAGCAGAAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: THTHTVVETGDT*CQPVAPTSRSR Trigger: CCTGCTTCTGCTTGTGGGGGCCACGGGTTGGCATCAGGTGTCTCCAGTCTCTACCACAGTGTGTGTGTGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| 3UTR TCA 72 bp | TCAGAAGTAGCTGAACTGAGGGCAGCAGTTCGGTGCTaGAGACTCCAGAGCTTCGCAGTCTGGCCTCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SEVAELRAAVRC*RLQSFAVWPQQ Trigger: CTGCTGAGGCCAGACTGCGAAGCTCTGGAGTCTTCAGCACCGAACTGCTGCCCTCAGTTCAGCTACTTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR GCA 72 bp | CAAGCTGCCGCTACTCCCCGGCCTGTCAGCTCCCAGTaGACTGAGGGGACAACTATTTCAGGTCACATAAGA | + |
|
Preference number: 3 (lower is better) Translates to: QAAATPRPVSSQ*TEGTTISGHIR Trigger: TCTTATGTGACCTGAAATAGTTGTCCCCTCAGTGCACTGGGAGCTGACAGGCCGGGGAGTAGCGGCAGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR CCA 72 bp | ACACACACACACACACACACACACTGTGGTAGAGACTaGAGACACCTGATGCCAACCCGTGGCCCCCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHTHCGRD*RHLMPTRGPHK Trigger: CTTGTGGGGGCCACGGGTTGGCATCAGGTGTCTCCAGTCTCTACCACAGTGTGTGTGTGTGTGTGTGTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| 3UTR CCA 72 bp | GGAGTGTCAGCGCGTAGAGTGGGAAGAAAGGGCAGGTaGACAGACACCAACGGAACAACAGCCACAGACACA | + |
|
Preference number: 3 (lower is better) Translates to: GVSARRVGRKGR*TDTNGTTATDT Trigger: TGTGTCTGTGGCTGTTGTTCCGTTGGTGTCTGTCCACCTGCCCTTTCTTCCCACTCTACGCGCTGACACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| 3UTR TCA 72 bp | GCAAGGTTTGGGTCCAGAGCTCCTGAGATTGCCTTCTaGGTTATCTTGGGCGTGGAATGGCAGCGCCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ARFGSRAPEIAF*VILGVEWQRQR Trigger: TCTCTGGCGCTGCCATTCCACGCCCAAGATAACTCAGAAGGCAATCTCAGGAGCTCTGGACCCAAACCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR TCA 72 bp | TGCCGCTACTCCCCGGCCTGTCAGCTCCCAGTGCACTaGGGGGACAACTATTTCAGGTCACATAAGAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: CRYSPACQLPVH*GDNYFRSHKNK Trigger: CTTGTTCTTATGTGACCTGAAATAGTTGTCCCCTCAGTGCACTGGGAGCTGACAGGCCGGGGAGTAGCGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAATGCTAGCAGGAGCGCTACAGAGGCACAGACAGCAAAGGCCATTTGTCGGCCTGACTTTGCAAGGTTaGGGTCCAGAGCTCCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: EMLAGALQRHRQQRPFVGLTLQG*GPELLR Trigger: TCTCAGGAGCTCTGGACCCAAACCTTGCAAAGTCAG...GCCGACAAATGGCCTTTGCTGTCTGTGCCTCTGTAGCGCTCCTGCTAGCATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR GCA 72 bp | ATGCAGACATCACTAGAGCATCTATGCAAGGAATTCTaGTGCCGTCAGCCTGGCCCTCAAGCACTGCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: MQTSLEHLCKEF*CRQPGPQALHR Trigger: CCTGTGCAGTGCTTGAGGGCCAGGCTGACGGCAGCAGAATTCCTTGCATAGATGCTCTAGTGATGTCTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR CCA 72 bp | GGTCCAGAGCTCCTGAGATTGCCTTCTGAGTTATCTTaGGCGTGGAATGGCAGCGCCAGAGACATGATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GPELLRLPSELS*AWNGSARDMIW Trigger: CCAAATCATGTCTCTGGCGCTGCCATTCCACGCCCAAGATAACTCAGAAGGCAATCTCAGGAGCTCTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCAGGCCCACCTTGCCGGGAGAGGACTTCACACCAGTGACACCTACTGACACATATCAGGAAGGCTaGATATTAGCAGGGAAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QPRPTLPGEDFTPVTPTDTYQEG*ILAGKL Trigger: TAACTTCCCTGCTAATATCAAGCCTTCCTGATATGT...GTCAGTAGGTGTCACTGGTGTGAAGTCCTCTCCCGGCAAGGTGGGCCTGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR TCA 72 bp | ACCCTGACCCCCAACAAAACTCATCTTAAGCATACATaGGAGCCAGGCATGGTAGACGTGCCTGGAATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TLTPNKTHLKHT*EPGMVDVPGIP Trigger: TGGGATTCCAGGCACGTCTACCATGCCTGGCTCTCATGTATGCTTAAGATGAGTTTTGTTGGGGGTCAGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR GCA 72 bp | CTGGACTCTTTAAGTATGGCGAATCTGGATACACTCTaGTCGCCCCACCCCATCCCTGTACAAATGCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LDSLSMANLDTL*SPHPIPVQMQT Trigger: TGTCTGCATTTGTACAGGGATGGGGTGGGGCGAGCAGAGTGTATCCAGATTCGCCATACTTAAAGAGTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR GCA 72 bp | ATAACACAACAGAATTCTGGGGCAGGAAGTGAGATGTaGAACGGAGCCTTGCCTAGAACACACGAGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ITQQNSGAGSEM*NGALPRTHEAE Trigger: CTCTGCCTCGTGTGTTCTAGGCAAGGCTCCGTTGCACATCTCACTTCCTGCCCCAGAATTCTGTTGTGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR GCA 72 bp | ATCCCTGTACAAATGCAGACATCACTAGAGCATCTATaGAAGGAATTCTGCTGCCGTCAGCCTGGCCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: IPVQMQTSLEHL*KEFCCRQPGPQ Trigger: TTGAGGGCCAGGCTGACGGCAGCAGAATTCCTTGCATAGATGCTCTAGTGATGTCTGCATTTGTACAGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR-3UTR CAA 90 bp | GACAGTCTGGTTGCGTTTCTTTTGACTAAAAACAAGCTACTGCCCTTGGGCAGCTGCAACAGCACATACTaGTGGCTATGTTCACACAGT | + |
|
Preference number: 3 (lower is better) Translates to: DSLVAFLLTKNKLLPLGSCNSTY*WLCSHS Trigger: ACTGTGTGAACATAGCCACAAGTATGTGCTGTTGCA...GCTGCCCAAGGGCAGTAGCTTGTTTTTAGTCAAAAGAAACGCAACCAGACTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR TCA 72 bp | GACAGACACCAACGGAACAACAGCCACAGACACACTTaGTGTAGAGACAAAGGGGGAAAGTTGGTAAAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: DRHQRNNSHRHT*CRDKGGKLVKY Trigger: GTACTTTACCAACTTTCCCCCTTTGTCTCTACATCAAGTGTGTCTGTGGCTGTTGTTCCGTTGGTGTCTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| 3UTR GCA 72 bp | CTTAAAGTGAAACTGATGGTCTGTGTTCCCATCGAGTaGGAGCCTCAGACCTCTGCTAACACACACCTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LKVKLMVCVPIE*EPQTSANTHLK Trigger: TTTAAGGTGTGTGTTAGCAGAGGTCTGAGGCTCGCACTCGATGGGAACACAGACCATCAGTTTCACTTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| 3UTR TCA 72 bp | ACCCATACGCAACTGTCAGCTTTTACCCTGAGTCCGTaGGGAGAACTTCTCCTTTGTTCAAAAACCTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: THTQLSAFTLSP*GELLLCSKTFE Trigger: TTCAAAGGTTTTTGAACAAAGGAGAAGTTCTCCTCACGGACTCAGGGTAAAAGCTGACAGTTGCGTATGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| 3UTR TCA 72 bp | CACACACACACACATCAGTGTTTCCCAACTAACAGTTaGGTCCTAAATGCAGTCTGTGCAACAGCACATACT | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHQCFPTNS*VLNAVCATAHT Trigger: AGTATGTGCTGTTGCACAGACTGCATTTAGGACTCAACTGTTAGTTGGGAAACACTGATGTGTGTGTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR TCA 72 bp | AATTCAAGGATGGCGACAGTCTGGTTGCGTTTCTTTTaGCTAAAAACAAGCTACTGCCCTTGGGCAGCTATT | + |
|
Preference number: 3 (lower is better) Translates to: NSRMATVWLRFF*LKTSYCPWAAI Trigger: AATAGCTGCCCAAGGGCAGTAGCTTGTTTTTAGTCAAAAGAAACGCAACCAGACTGTCGCCATCCTTGAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR CCA 72 bp | ACACACTGTGGTAAAGCAGCGCTTCAAGAGTTATTTTaGGGAAGTTCATCGTCAGAAAGGTCCCTTTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: THCGKAALQELF*GSSSSERSLSH Trigger: ATGAGAAAGGGACCTTTCTGACGATGAACTTCCCCAAAATAACTCTTGAAGCGCTGCTTTACCACAGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| 3UTR GCA 72 bp | CACTCTCTCAGAAGAGAAAGATTCAGGGACTGTGTGTaGTCAAGATTCAACATATCAGGAAGGCTTGATATT | + |
|
Preference number: 3 (lower is better) Translates to: HSLRRERFRDCV*SRFNISGRLDI Trigger: AATATCAAGCCTTCCTGATATGTTGAATCTTGAGCACACACAGTCCCTGAATCTTTCTCTTCTGAGAGAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR CCA 72 bp | ATAAGAACAAGGACCAATTCAGAGAATGCACAAAGATaGCTCACAAATATAATGCCGGTAGCAGAGTTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: IRTRTNSENAQR*LTNIMPVAELR Trigger: ACGCAACTCTGCTACCGGCATTATATTTGTGAGCCATCTTTGTGCATTCTCTGAATTGGTCCTTGTTCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR CCA 90 bp | GAGACACCTGATGCCAACCCGTGGCCCCCACAAGCAGAAGCAGGCAGGCACGCGCTCGCTGCAAGGCGCTaGAGCAGCAGCCCCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: ETPDANPWPPQAEAGRHALAARR*SSSPTM Trigger: CATTGTGGGGCTGCTGCTCCAGCGCCTTGCAGCGAG...CGCGTGCCTGCCTGCTTCTGCTTGTGGGGGCCACGGGTTGGCATCAGGTGTCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR GCA 90 bp | CTGATGCCAACCCGTGGCCCCCACAAGCAGAAGCAGGCAGGCACTCGCGCACGCAGCCAGGATCCCCACTaGCCAGATGTAGAGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LMPTRGPHKQKQAGTRARSQDPH*PDVESC Trigger: GCAGCTCTCTACATCTGGGCAGTGGGGATCCTGGCT...GCGTGCGCGAGTGCCTGCCTGCTTCTGCTTGTGGGGGCCACGGGTTGGCATCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR TCA 90 bp | CTGATGCCAACCCGTGGCCCCCACAAGCAGAAGCAGGCAGGCACTCGCGCACGCCTGCAGACAGGAGATTaGTGGCGATGGCTGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LMPTRGPHKQKQAGTRARLQTGD*WRWLSQ Trigger: TTGGCTCAGCCATCGCCATCAATCTCCTGTCTGCAG...GCGTGCGCGAGTGCCTGCCTGCTTCTGCTTGTGGGGGCCACGGGTTGGCATCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR CCA 90 bp | AATCTGGGCGTAGCAGCTGATCTGGGACCACAGTGTTGGGGCGCGAGGCCAGGAATGCCCCTGAGTACTTaGCTCTGGCTGGGCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: NLGVAADLGPQCWGARPGMPLST*LWLGFT Trigger: AGTGAAGCCCAGCCAGAGCCAAGTACTCAGGGGCAT...TCCTGGCCTCGCGCCCCAACACTGTGGTCCCAGATCAGCTGCTACGCCCAGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR CCA 90 bp | AATCTGGGCGTAGCAGCTGATCTGGGACCACAGTGTTGGGGCGCGAGGCCAGGACCTCAGAGTCTCCAGTaGAATGTGGGAGGGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLGVAADLGPQCWGARPGPQSLQ*NVGGMS Trigger: ACTCATCCCTCCCACATTCCACTGGAGACTCTGAGG...TCCTGGCCTCGCGCCCCAACACTGTGGTCCCAGATCAGCTGCTACGCCCAGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR CCA 90 bp | GTGGGAAGAAAGGGCAGGTGGACAGACACCAACGGAACAACAGCCACAGACACAGCAGCAGCCCCACAATaGTGGCCAAGAGGAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: VGRKGRWTDTNGTTATDTAAAPQ*WPRGAP Trigger: GGGTGCTCCTCTTGGCCACCATTGTGGGGCTGCTGC...TGTGTCTGTGGCTGTTGTTCCGTTGGTGTCTGTCCACCTGCCCTTTCTTCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR CCA 90 bp | GAATTCTGCTGCCGTCAGCCTGGCCCTCAAGCACTGCACAGGTTCAAAAGCTCAGCAGCAGCCCCACAATaGTGGCCAAGAGGAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: EFCCRQPGPQALHRFKSSAAAPQ*WPRGAP Trigger: GGGTGCTCCTCTTGGCCACCATTGTGGGGCTGCTGC...TGAGCTTTTGAACCTGTGCAGTGCTTGAGGGCCAGGCTGACGGCAGCAGAATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCCAGGCCCACCTTGCCGGGAGAGGACTTCACACCAGTGACACCTACTGACATTGATGGCGATGGCTaGGCCAATGACTTCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QPRPTLPGEDFTPVTPTDIDGDG*ANDFLH Trigger: ATGCAGGAAGTCATTGGCTCAGCCATCGCCATCAAT...GTCAGTAGGTGTCACTGGTGTGAAGTCCTCTCCCGGCAAGGTGGGCCTGGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR GCA 90 bp | ACTAAAGCCTCCTTGAAGCCACTTGCTGCCGACCTGGCAGGATCTCACAAGACATCACAGCTCCCACGATaGCCACCGCCTGCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TKASLKPLAADLAGSHKTSQLPR*PPPAPP Trigger: AGGTGGAGCAGGCGGTGGGCATCGTGGGAGCTGTGA...TGTCTTGTGAGATCCTGCCAGGTCGGCAGCAAGTGGCTTCAAGGAGGCTTTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCCAGGCCCACCTTGCCGGGAGAGGACTTCACACCAGTGACACCTACTGACGCATGTCAGAACCAATaGTTGCCAACTCCACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QPRPTLPGEDFTPVTPTDACQNQ*LPTPPS Trigger: TGATGGTGGAGTTGGCAATCATTGGTTCTGACATGC...GTCAGTAGGTGTCACTGGTGTGAAGTCCTCTCCCGGCAAGGTGGGCCTGGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCCAGGCCCACCTTGCCGGGAGAGGACTTCACACCAGTGACACCTACTGACGTCAGAACCAATGATTaGCAACTCCACCATCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPRPTLPGEDFTPVTPTDVRTND*QLHHQP Trigger: TGGCTGATGGTGGAGTTGGCAATCATTGGTTCTGAC...GTCAGTAGGTGTCACTGGTGTGAAGTCCTCTCCCGGCAAGGTGGGCCTGGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCCAGGCCCACCTTGCCGGGAGAGGACTTCACACCAGTGACACCTACTGACGGTCAGCATGGGGGCTaGTGTTATTTTTGCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: QPRPTLPGEDFTPVTPTDGQHGG*CYFCRL Trigger: AAGTCTGCAAAAATAACAGCAGCCCCCATGCTGACC...GTCAGTAGGTGTCACTGGTGTGAAGTCCTCTCCCGGCAAGGTGGGCCTGGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR GCA 90 bp | GCCCACTGCCTCCGAAGGGTCTCTGACCCATACGCAACTGTCAGCTTTTACCCTAGCCACGCTAACCACTaGAGCCACCACATAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AHCLRRVSDPYATVSFYPSHANH*SHHIEC Trigger: GCACTCTATGTGGTGGCTGCAGTGGTTAGCGTGGCT...AGGGTAAAAGCTGACAGTTGCGTATGGGTCAGAGACCCTTCGGAGGCAGTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR CCA 90 bp | CAGCCCAGGCCCACCTTGCCGGGAGAGGACTTCACACCAGTGACACCTACTGACGGAAAGAGGTCAGCATaGGGGCTGCTGTTATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QPRPTLPGEDFTPVTPTDGKRSA*GLLLFL Trigger: CAAAAATAACAGCAGCCCCCATGCTGACCTCTTTCC...GTCAGTAGGTGTCACTGGTGTGAAGTCCTCTCCCGGCAAGGTGGGCCTGGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR CCA 90 bp | GAATTCTGCTGCCGTCAGCCTGGCCCTCAAGCACTGCACAGGTTCAAAAGCTCAAGGTGCTCCACATCCTaGAAGACAGCGACGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EFCCRQPGPQALHRFKSSRCSTS*KTATSR Trigger: CCTGCTCGTCGCTGTCTTCCAGGATGTGGAGCACCT...TGAGCTTTTGAACCTGTGCAGTGCTTGAGGGCCAGGCTGACGGCAGCAGAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR CAA 72 bp | TCGAATATAGGGTTGCAGATGGGTGGCAACCACAGGTaGGGAATGCTGCTGGGAGGGACCCGTGACCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SNIGLQMGGNHR*GMLLGGTRDLV Trigger: AACCAGGTCACGGGTCCCTCCCAGCAGCATTCCCAACCTGTGGTTGCCACCCATCTGCAACCCTATATTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR TCA 90 bp | ACTAAAGCCTCCTTGAAGCCACTTGCTGCCGACCTGGCAGGATCTCACAAGACACCATCAGCCACAGGATaGTCCGTGGGACCTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TKASLKPLAADLAGSHKTPSATG*SVGPWD Trigger: ATCCCAAGGTCCCACGGATCATCCTGTGGCTGATGG...TGTCTTGTGAGATCCTGCCAGGTCGGCAGCAAGTGGCTTCAAGGAGGCTTTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR TCA 90 bp | AAGTATGGCGAATCTGGATACACTCTGCTCGCCCCACCCCATCCCTGTACAAATGCACGAACATGCCCCTaGGTACTTGGCTCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KYGESGYTLLAPPHPCTNARTCP*VLGSGW Trigger: CCAGCCAGAGCCAAGTACTCAGGGGCATGTTCGTGC...ATTTGTACAGGGATGGGGTGGGGCGAGCAGAGTGTATCCAGATTCGCCATACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR GCA 90 bp | AATCTGGGCGTAGCAGCTGATCTGGGACCACAGTGTTGGGGCGCGAGGCCAGGAGAAAGACAGACCCAATaGAATCAAACACTGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: NLGVAADLGPQCWGARPGERQTQ*NQTLPT Trigger: GGTTGGCAGTGTTTGATTGCATTGGGTCTGTCTTTC...TCCTGGCCTCGCGCCCCAACACTGTGGTCCCAGATCAGCTGCTACGCCCAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR CCA 90 bp | AAAAATCCTGAACCAGCAGGGCAGTGGAGGTGTCTGCCTCTAATCCTAGCACTCGCAGCCCCACAATGGTaGCCAAGAGGAGCACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNPEPAGQWRCLPLILALAAPQW*PRGAPR Trigger: TCTGGGTGCTCCTCTTGGCCACCATTGTGGGGCTGC...GAGTGCTAGGATTAGAGGCAGACACCTCCACTGCCCTGCTGGTTCAGGATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGAAGAAAGGGCAGGTGGACAGACACCAACGGAACAACAGCCACAGACACACATCAAAGTAGGTGGTaGAGGGCTCCTCAGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGRKGRWTDTNGTTATDTHQSRW*RAPQSL Trigger: GAGACTCTGAGGAGCCCTTCACCACCTACTTTGATG...TGTGTCTGTGGCTGTTGTTCCGTTGGTGTCTGTCCACCTGCCCTTTCTTCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR TCA 90 bp | GCCAAGAGGAGCACCCAGAGCAGCTTAAATCCAGCCACTGCTCCAGACTGCAAACATCAAAGTAGGTGGTaGAGGGCTCCTCAGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AKRSTQSSLNPATAPDCKHQSRW*RAPQSL Trigger: GAGACTCTGAGGAGCCCTTCACCACCTACTTTGATG...TTTGCAGTCTGGAGCAGTGGCTGGATTTAAGCTGCTCTGGGTGCTCCTCTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136168.2 |
||
| CDS-3UTR TCA 90 bp | AGTACCTGCTGTCCAGGAAGACCTGAGTTTGGGTCCCCAGCACTGTGTAAAATCCCATCAGCCACAGGATaGTCCGTGGGACCTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: STCCPGRPEFGSPALCKIPSATG*SVGPWD Trigger: ATCCCAAGGTCCCACGGATCATCCTGTGGCTGATGG...GATTTTACACAGTGCTGGGGACCCAAACTCAGGTCTTCCTGGACAGCAGGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR TCA 90 bp | TGCTGTCCAGGAAGACCTGAGTTTGGGTCCCCAGCACTGTGTAAAATCTGGGCGCGATGGCTGAGCCAATaGCTTCCTGCATGTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CCPGRPEFGSPALCKIWARWLSQ*LPACQN Trigger: GTTCTGACATGCAGGAAGTCATTGGCTCAGCCATCG...CGCCCAGATTTTACACAGTGCTGGGGACCCAAACTCAGGTCTTCCTGGACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR GCA 90 bp | ACCTTAAAATGCTTAAATTCCTCAGGACACTCAGCGGTACACATACGGGCGGCCCACTCCAAGTCTCGCTaGAAGGCGCTGGAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLKCLNSSGHSAVHIRAAHSKSR*KALEQQ Trigger: CTGCTGCTCCAGCGCCTTGCAGCGAGACTTGGAGTG...GGCCGCCCGTATGTGTACCGCTGAGTGTCCTGAGGAATTTAAGCATTTTAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR GCA 90 bp | GAATTCTGCTGCCGTCAGCCTGGCCCTCAAGCACTGCACAGGTTCAAAAGCTCATGCAGGTACATGTTGTaGGGCATGATCACAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EFCCRQPGPQALHRFKSSCRYML*GMITAP Trigger: GGGAGCTGTGATCATGCCGCACAACATGTACCTGCA...TGAGCTTTTGAACCTGTGCAGTGCTTGAGGGCCAGGCTGACGGCAGCAGAATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR TCA 90 bp | AAAAATCCTGAACCAGCAGGGCAGTGGAGGTGTCTGCCTCTAATCCTAGCACTCCTGCAGACAGGAGATTaGTGGCGATGGCTGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KNPEPAGQWRCLPLILALLQTGD*WRWLSQ Trigger: TTGGCTCAGCCATCGCCATCAATCTCCTGTCTGCAG...GAGTGCTAGGATTAGAGGCAGACACCTCCACTGCCCTGCTGGTTCAGGATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR TCA 90 bp | AGTACCTGCTGTCCAGGAAGACCTGAGTTTGGGTCCCCAGCACTGTGTAAAATCACATGTTGTGCGGCATaGTCACAGCTCCCACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: STCCPGRPEFGSPALCKITCCAA*SQLPRC Trigger: GCATCGTGGGAGCTGTGATCATGCCGCACAACATGT...GATTTTACACAGTGCTGGGGACCCAAACTCAGGTCTTCCTGGACAGCAGGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR TCA 90 bp | GTGGGAAGAAAGGGCAGGTGGACAGACACCAACGGAACAACAGCCACAGACACATCAGGAATCCCTCCATaGCAAACTGGCCAGAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGRKGRWTDTNGTTATDTSGIPP*QTGQNR Trigger: CCTATTCTGGCCAGTTTGTCATGGAGGGATTCCTGA...TGTGTCTGTGGCTGTTGTTCCGTTGGTGTCTGTCCACCTGCCCTTTCTTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| 3UTR CAA 72 bp | CTGACTTTGCAAGGTTTGGGTCCAGAGCTCCTGAGATaGCCTTCTGAGTTATCTTGGGCGTGGAATGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLQGLGPELLR*PSELSWAWNGS Trigger: GCTGCCATTCCACGCCCAAGATAACTCAGAAGGCAATCTCAGGAGCTCTGGACCCAAACCTTGCAAAGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR CAA 72 bp | AGCTCCCGCTGCCACCAAGACAATGATCACACACTCTaGTGTCACTCCTCTCCAGCAGACAGACAGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSRCHQDNDHTL*CHSSPADRQHL Trigger: CAAATGCTGTCTGTCTGCTGGAGAGGAGTGACACAAGAGTGTGTGATCATTGTCTTGGTGGCAGCGGGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR TCA 90 bp | TTGCAAGGTTTGGGTCCAGAGCTCCTGAGATTGCCTTCTGAGTTATCTTGGGCGCATCAAAGTAGGTGGTaGAGGGCTCCTCAGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQGLGPELLRLPSELSWAHQSRW*RAPQSL Trigger: GAGACTCTGAGGAGCCCTTCACCACCTACTTTGATG...CGCCCAAGATAACTCAGAAGGCAATCTCAGGAGCTCTGGACCCAAACCTTGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCTAACAGGCACTTGGCCCGAAAGGGCTTAGAGAAAGTGTTCTTAAGGTCTGCACGAACATGCCCCTaGGTACTTGGCTCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FANRHLARKGLEKVFLRSARTCP*VLGSGW Trigger: CCAGCCAGAGCCAAGTACTCAGGGGCATGTTCGTGC...AGACCTTAAGAACACTTTCTCTAAGCCCTTTCGGGCCAAGTGCCTGTTAGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR TCA 90 bp | AGTCCACGAGTGCTACAGTCTTCTGCAGGCAGCACTCTCTCAGAAGAGAAAGATACATGTTGTGCGGCATaGTCACAGCTCCCACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SPRVLQSSAGSTLSEEKDTCCAA*SQLPRC Trigger: GCATCGTGGGAGCTGTGATCATGCCGCACAACATGT...ATCTTTCTCTTCTGAGAGAGTGCTGCCTGCAGAAGACTGTAGCACTCGTGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR GCA 90 bp | GACAGTCTGGTTGCGTTTCTTTTGACTAAAAACAAGCTACTGCCCTTGGGCAGCCAGGGGGACCCTTCCTaGAGACAGGAGATTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: DSLVAFLLTKNKLLPLGSQGDPS*RQEIDG Trigger: GCCATCAATCTCCTGTCTGCAGGAAGGGTCCCCCTG...GCTGCCCAAGGGCAGTAGCTTGTTTTTAGTCAAAAGAAACGCAACCAGACTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR TCA 90 bp | AGTACCTGCTGTCCAGGAAGACCTGAGTTTGGGTCCCCAGCACTGTGTAAAATCATTGATGGCGATGGCTaGGCCAATGACTTCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: STCCPGRPEFGSPALCKIIDGDG*ANDFLH Trigger: ATGCAGGAAGTCATTGGCTCAGCCATCGCCATCAAT...GATTTTACACAGTGCTGGGGACCCAAACTCAGGTCTTCCTGGACAGCAGGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR GCA 90 bp | GAAATGCTAGCAGGAGCGCTACAGAGGCACAGACAGCAAAGGCCATTTGTCGGCCTTAAATCCAGCCACTaGTCCAGACTGCAAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EMLAGALQRHRQQRPFVGLKSSH*SRLQIR Trigger: TCTGATTTGCAGTCTGGAGCAGTGGCTGGATTTAAG...GCCGACAAATGGCCTTTGCTGTCTGTGCCTCTGTAGCGCTCCTGCTAGCATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGCAAAAACCAAAAAGCTTCACTACCTGCACACGCGCGTTTGGAGTGTCGCAGGGGGACCCTTCCTaGAGACAGGAGATTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKQKPKSFTTCTRAFGVSQGDPS*RQEIDG Trigger: GCCATCAATCTCCTGTCTGCAGGAAGGGTCCCCCTG...CGACACTCCAAACGCGCGTGTGCAGGTAGTGAAGCTTTTTGGTTTTTGCTTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR GCA 90 bp | AAATACATATCGATACACTTTAAACCCCAGAAGTGCAGACACAAGCCTGAGGGATCACAGCTCCCACGATaGCCACCGCCTGCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KYISIHFKPQKCRHKPEGSQLPR*PPPAPP Trigger: AGGTGGAGCAGGCGGTGGGCATCGTGGGAGCTGTGA...TCCCTCAGGCTTGTGTCTGCACTTCTGGGGTTTAAAGTGTATCGATATGTATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR GCA 90 bp | ACCTTAAAATGCTTAAATTCCTCAGGACACTCAGCGGTACACATACGGGCGGCCTGCAGGTACATGTTGTaGGGCATGATCACAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLKCLNSSGHSAVHIRAACRYML*GMITAP Trigger: GGGAGCTGTGATCATGCCGCACAACATGTACCTGCA...GGCCGCCCGTATGTGTACCGCTGAGTGTCCTGAGGAATTTAAGCATTTTAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR GCA 90 bp | TGCTGTCCAGGAAGACCTGAGTTTGGGTCCCCAGCACTGTGTAAAATCTGGGCGGGCTGCTGTTATTTTTaGAGACTTCAACCACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CCPGRPEFGSPALCKIWAGCCYF*RLQPPA Trigger: AGCAGGTGGTTGAAGTCTGCAAAAATAACAGCAGCC...CGCCCAGATTTTACACAGTGCTGGGGACCCAAACTCAGGTCTTCCTGGACAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR GCA 90 bp | GAAATGCTAGCAGGAGCGCTACAGAGGCACAGACAGCAAAGGCCATTTGTCGGCGGCTGCTGTTATTTTTaGAGACTTCAACCACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EMLAGALQRHRQQRPFVGGCCYF*RLQPPA Trigger: AGCAGGTGGTTGAAGTCTGCAAAAATAACAGCAGCC...GCCGACAAATGGCCTTTGCTGTCTGTGCCTCTGTAGCGCTCCTGCTAGCATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTAAACCCCAGAAGTGCAGACACAAGCCTGAGGGACTGCACAGCTGCCACAGGTCAGCATGGGGGCTaGTGTTATTTTTGCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: TLNPRSADTSLRDCTAATGQHGG*CYFCRL Trigger: AAGTCTGCAAAAATAACAGCAGCCCCCATGCTGACC...TGTGGCAGCTGTGCAGTCCCTCAGGCTTGTGTCTGCACTTCTGGGGTTTAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCCAGGAAGACCTGAGTTTGGGTCCCCAGCACTGTGTAAAATCTGGGCGAGAAGCGCCATCGTCTaGCATCTTTTCTTTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: CCPGRPEFGSPALCKIWARSAIV*HLFFRI Trigger: GATCCTAAAGAAAAGATGCCAGACGATGGCGCTTCT...CGCCCAGATTTTACACAGTGCTGGGGACCCAAACTCAGGTCTTCCTGGACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR CCA 90 bp | AGTACCTGCTGTCCAGGAAGACCTGAGTTTGGGTCCCCAGCACTGTGTAAAATCCTGAGTACTTGGCTCTaGCTGGGCTTCACTGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: STCCPGRPEFGSPALCKILSTWL*LGFTVM Trigger: CATTACAGTGAAGCCCAGCCAGAGCCAAGTACTCAG...GATTTTACACAGTGCTGGGGACCCAAACTCAGGTCTTCCTGGACAGCAGGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR CCA 90 bp | TTGCAAGGTTTGGGTCCAGAGCTCCTGAGATTGCCTTCTGAGTTATCTTGGGCGCTGAGTACTTGGCTCTaGCTGGGCTTCACTGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LQGLGPELLRLPSELSWALSTWL*LGFTVM Trigger: CATTACAGTGAAGCCCAGCCAGAGCCAAGTACTCAG...CGCCCAAGATAACTCAGAAGGCAATCTCAGGAGCTCTGGACCCAAACCTTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR CAA 72 bp | ATCTTGGGCGTGGAATGGCAGCGCCAGAGACATGATTaGGTGAAGGGTACTTTTGGGAGTAGTGCAGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILGVEWQRQRHD*VKGTFGSSAVS Trigger: GCTAACTGCACTACTCCCAAAAGTACCCTTCACCAAATCATGTCTCTGGCGCTGCCATTCCACGCCCAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR TCA 90 bp | TCGGTGCTTAAAGTGAAACTGATGGTCTGTGTTCCCATCGAGTGCGAGCCTCAGGCATGTCAGAACCAATaGTTGCCAACTCCACCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SVLKVKLMVCVPIECEPQACQNQ*LPTPPS Trigger: TGATGGTGGAGTTGGCAATCATTGGTTCTGACATGC...CTGAGGCTCGCACTCGATGGGAACACAGACCATCAGTTTCACTTTAAGCACCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR TCA 90 bp | ACTGCCTCCGAAGGGTCTCTGACCCATACGCAACTGTCAGCTTTTACCCTGAGTCTACAAAGTACATGTTaGTGGAGCAGACGATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TASEGSLTHTQLSAFTLSLQSTC*WSRRSG Trigger: TCCTGATCGTCTGCTCCATCAACATGTACTTTGTAG...ACTCAGGGTAAAAGCTGACAGTTGCGTATGGGTCAGAGACCCTTCGGAGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR GCA 90 bp | TCGGTGCTTAAAGTGAAACTGATGGTCTGTGTTCCCATCGAGTGCGAGCCTCAGTTGACTAAGGCAGAATaGAGGTACATGTTGTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVLKVKLMVCVPIECEPQLTKAE*RYMLCG Trigger: GCCGCACAACATGTACCTGCATTCTGCCTTAGTCAA...CTGAGGCTCGCACTCGATGGGAACACAGACCATCAGTTTCACTTTAAGCACCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR CCA 90 bp | CCAGAGCAGCTTAAATCCAGCCACTGCTCCAGACTGCAAATCAGATTCGATGTTCCTCAGAGTCTCCAGTaGAATGTGGGAGGGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PEQLKSSHCSRLQIRFDVPQSLQ*NVGGMS Trigger: ACTCATCCCTCCCACATTCCACTGGAGACTCTGAGG...AACATCGAATCTGATTTGCAGTCTGGAGCAGTGGCTGGATTTAAGCTGCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136168.2 |
||
| CDS-3UTR CCA 90 bp | GAAATGCTAGCAGGAGCGCTACAGAGGCACAGACAGCAAAGGCCATTTGTCGGCTCCAGCCTATTCCATTaGAAAACTCACTCATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EMLAGALQRHRQQRPFVGSSLFH*KTHSSL Trigger: CAGTGATGAGTGAGTTTTCCAATGGAATAGGCTGGA...GCCGACAAATGGCCTTTGCTGTCTGTGCCTCTGTAGCGCTCCTGCTAGCATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR CAA 72 bp | GCTCACCTCCGAACTAAGGGATTTGCTAACAGGCACTaGGCCCGAAAGGGCTTAGAGAAAGTGTTCTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AHLRTKGFANRH*ARKGLEKVFLR Trigger: CCTTAAGAACACTTTCTCTAAGCCCTTTCGGGCCAAGTGCCTGTTAGCAAATCCCTTAGTTCGGAGGTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| 3UTR CAA 72 bp | ACGTTCACAAGCTGTAAAAAGTTCACTAAAGCCTCCTaGAAGCCACTTGCTGCCGACCTGGCAGGATCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TFTSCKKFTKAS*KPLAADLAGSH Trigger: GTGAGATCCTGCCAGGTCGGCAGCAAGTGGCTTCAAGGAGGCTTTAGTGAACTTTTTACAGCTTGTGAACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR TCA 90 bp | AGTACCTGCTGTCCAGGAAGACCTGAGTTTGGGTCCCCAGCACTGTGTAAAATCCGATGCAGGACTCGATaGAGAAGTACTTATTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: STCCPGRPEFGSPALCKIRCRTR*RSTYWL Trigger: AAGCCAATAAGTACTTCTTCATCGAGTCCTGCATCG...GATTTTACACAGTGCTGGGGACCCAAACTCAGGTCTTCCTGGACAGCAGGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR TCA 90 bp | TTGCAAGGTTTGGGTCCAGAGCTCCTGAGATTGCCTTCTGAGTTATCTTGGGCGCGATGCAGGACTCGATaGAGAAGTACTTATTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQGLGPELLRLPSELSWARCRTR*RSTYWL Trigger: AAGCCAATAAGTACTTCTTCATCGAGTCCTGCATCG...CGCCCAAGATAACTCAGAAGGCAATCTCAGGAGCTCTGGACCCAAACCTTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR GCA 90 bp | TCGGTGCTTAAAGTGAAACTGATGGTCTGTGTTCCCATCGAGTGCGAGCCTCAGGCCACTGCTCCAGACTaGAAATCAGATTCGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVLKVKLMVCVPIECEPQATAPD*KSDSMF Trigger: AAACATCGAATCTGATTTGCAGTCTGGAGCAGTGGC...CTGAGGCTCGCACTCGATGGGAACACAGACCATCAGTTTCACTTTAAGCACCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR GCA 90 bp | ACATATCGATACACTTTAAACCCCAGAAGTGCAGACACAAGCCTGAGGGACTGCCATACTTCAGCAAGATaGAAGCCGGTGACCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TYRYTLNPRSADTSLRDCHTSAR*KPVTTP Trigger: TGGAGTGGTCACCGGCTTGCATCTTGCTGAAGTATG...GCAGTCCCTCAGGCTTGTGTCTGCACTTCTGGGGTTTAAAGTGTATCGATATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR GCA 90 bp | TCGGTGCTTAAAGTGAAACTGATGGTCTGTGTTCCCATCGAGTGCGAGCCTCAGAAACACAAAAGTGTCTaGGATGGTGATGAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVLKVKLMVCVPIECEPQKHKSV*DGDEDS Trigger: GGAGTCCTCATCACCATCGCAGACACTTTTGTGTTT...CTGAGGCTCGCACTCGATGGGAACACAGACCATCAGTTTCACTTTAAGCACCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR GCA 90 bp | TTGCAAGGTTTGGGTCCAGAGCTCCTGAGATTGCCTTCTGAGTTATCTTGGGCGAAACACAAAAGTGTCTaGGATGGTGATGAGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQGLGPELLRLPSELSWAKHKSV*DGDEDS Trigger: GGAGTCCTCATCACCATCGCAGACACTTTTGTGTTT...CGCCCAAGATAACTCAGAAGGCAATCTCAGGAGCTCTGGACCCAAACCTTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCACGAGTGCTACAGTCTTCTGCAGGCAGCACTCTCTCAGAAGAGAAAGATTTGACTAAGGCAGAATaGAGGTACATGTTGTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPRVLQSSAGSTLSEEKDLTKAE*RYMLCG Trigger: GCCGCACAACATGTACCTGCATTCTGCCTTAGTCAA...ATCTTTCTCTTCTGAGAGAGTGCTGCCTGCAGAAGACTGTAGCACTCGTGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR GCA 90 bp | TTGCAAGGTTTGGGTCCAGAGCTCCTGAGATTGCCTTCTGAGTTATCTTGGGCGGAAAGACAGACCCAATaGAATCAAACACTGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: LQGLGPELLRLPSELSWAERQTQ*NQTLPT Trigger: GGTTGGCAGTGTTTGATTGCATTGGGTCTGTCTTTC...CGCCCAAGATAACTCAGAAGGCAATCTCAGGAGCTCTGGACCCAAACCTTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR CCA 90 bp | GACAGTCTGGTTGCGTTTCTTTTGACTAAAAACAAGCTACTGCCCTTGGGCAGCAAACTCACTCATCACTaGCCGCAGGCTTGTGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: DSLVAFLLTKNKLLPLGSKLTHH*PQACER Trigger: ACGTTCACAAGCCTGCGGCCAGTGATGAGTGAGTTT...GCTGCCCAAGGGCAGTAGCTTGTTTTTAGTCAAAAGAAACGCAACCAGACTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR GCA 90 bp | ACCTTAAAATGCTTAAATTCCTCAGGACACTCAGCGGTACACATACGGGCGGCCCTTAAATCCAGCCACTaGTCCAGACTGCAAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLKCLNSSGHSAVHIRAALKSSH*SRLQIR Trigger: TCTGATTTGCAGTCTGGAGCAGTGGCTGGATTTAAG...GGCCGCCCGTATGTGTACCGCTGAGTGTCCTGAGGAATTTAAGCATTTTAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR GCA 90 bp | AAGTATGGCGAATCTGGATACACTCTGCTCGCCCCACCCCATCCCTGTACAAATGAGCCAATGACTTCCTaGATGTCAGAACCAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: KYGESGYTLLAPPHPCTNEPMTS*MSEPMI Trigger: AATCATTGGTTCTGACATGCAGGAAGTCATTGGCTC...ATTTGTACAGGGATGGGGTGGGGCGAGCAGAGTGTATCCAGATTCGCCATACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR GCA 90 bp | ACTAAAGCCTCCTTGAAGCCACTTGCTGCCGACCTGGCAGGATCTCACAAGACACAGACTTCAACCACCTaGTTGTTGGTTTTCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TKASLKPLAADLAGSHKTQTSTT*LLVFSK Trigger: TTTTGAGAAAACCAACAAGCAGGTGGTTGAAGTCTG...TGTCTTGTGAGATCCTGCCAGGTCGGCAGCAAGTGGCTTCAAGGAGGCTTTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCAGGTCACATAAGAACAAGGACCAATTCAGAGAATGCACAAAGATGGCTCAGCCAGGATCCCCACTaGCCAGATGTAGAGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISGHIRTRTNSENAQRWLSQDPH*PDVESC Trigger: GCAGCTCTCTACATCTGGGCAGTGGGGATCCTGGCT...GAGCCATCTTTGTGCATTCTCTGAATTGGTCCTTGTTCTTATGTGACCTGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| CDS-3UTR CCA 90 bp | TTCATCGTCAGAAAGGTCCCTTTCTCATTTGTTACCCAAATAGAACAAAGACCTGCAGCCCCACAATGGTaGCCAAGAGGAGCACCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FIVRKVPFSFVTQIEQRPAAPQW*PRGAPR Trigger: TCTGGGTGCTCCTCTTGGCCACCATTGTGGGGCTGC...AGGTCTTTGTTCTATTTGGGTAACAAATGAGAAAGGGACCTTTCTGACGATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR CCA 90 bp | CATCATAAAGTGTTTTCGGTGTTAAAGACCAAACAGGAAAGAAAACCAAACAGGCTCGCTGCAAGGCGCTaGAGCAGCAGCCCCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: HHKVFSVLKTKQERKPNRLAARR*SSSPTM Trigger: CATTGTGGGGCTGCTGCTCCAGCGCCTTGCAGCGAG...CCTGTTTGGTTTTCTTTCCTGTTTGGTCTTTAACACCGAAAACACTTTATGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| CDS-3UTR CCA 90 bp | TTTGCTAACAGGCACTTGGCCCGAAAGGGCTTAGAGAAAGTGTTCTTAAGGTCTAAACTCACTCATCACTaGCCGCAGGCTTGTGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: FANRHLARKGLEKVFLRSKLTHH*PQACER Trigger: ACGTTCACAAGCCTGCGGCCAGTGATGAGTGAGTTT...AGACCTTAAGAACACTTTCTCTAAGCCCTTTCGGGCCAAGTGCCTGTTAGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR GCA 90 bp | TTAAAGCAAAAACCAAAAAGCTTCACTACCTGCACACGCGCGTTTGGAGTGTCGGTCAGAACCAATGATTaGCAACTCCACCATCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKQKPKSFTTCTRAFGVSVRTND*QLHHQP Trigger: TGGCTGATGGTGGAGTTGGCAATCATTGGTTCTGAC...CGACACTCCAAACGCGCGTGTGCAGGTAGTGAAGCTTTTTGGTTTTTGCTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR GCA 90 bp | AGTACCTGCTGTCCAGGAAGACCTGAGTTTGGGTCCCCAGCACTGTGTAAAATCCAGACTTCAACCACCTaGTTGTTGGTTTTCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: STCCPGRPEFGSPALCKIQTSTT*LLVFSK Trigger: TTTTGAGAAAACCAACAAGCAGGTGGTTGAAGTCTG...GATTTTACACAGTGCTGGGGACCCAAACTCAGGTCTTCCTGGACAGCAGGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR CCA 90 bp | TTTAGAAACTTAGTGTTTAAAACAGCTCAAGGGCCACCTTTTCAAGGTGCTGCCCCTCAGAGTCTCCAGTaGAATGTGGGAGGGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FRNLVFKTAQGPPFQGAAPQSLQ*NVGGMS Trigger: ACTCATCCCTCCCACATTCCACTGGAGACTCTGAGG...GGCAGCACCTTGAAAAGGTGGCCCTTGAGCTGTTTTAAACACTAAGTTTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| CDS-3UTR TCA 90 bp | ATTTCAGGTCACATAAGAACAAGGACCAATTCAGAGAATGCACAAAGATGGCTCCGATGGCTGAGCCAATaGCTTCCTGCATGTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISGHIRTRTNSENAQRWLRWLSQ*LPACQN Trigger: GTTCTGACATGCAGGAAGTCATTGGCTCAGCCATCG...GAGCCATCTTTGTGCATTCTCTGAATTGGTCCTTGTTCTTATGTGACCTGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR CCA 90 bp | AAAATCTTACCCAAACTGGCACGTTTGGGTTCACATAAATACATATCGATACACAGGTGCTCCACATCCTaGAAGACAGCGACGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KILPKLARLGSHKYISIHRCSTS*KTATSR Trigger: CCTGCTCGTCGCTGTCTTCCAGGATGTGGAGCACCT...GTGTATCGATATGTATTTATGTGAACCCAAACGTGCCAGTTTGGGTAAGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR TCA 90 bp | CAATTCAGAGAATGCACAAAGATGGCTCACAAATATAATGCCGGTAGCAGAGTTTCAGGAATCCCTCCATaGCAAACTGGCCAGAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: QFRECTKMAHKYNAGSRVSGIPP*QTGQNR Trigger: CCTATTCTGGCCAGTTTGTCATGGAGGGATTCCTGA...AACTCTGCTACCGGCATTATATTTGTGAGCCATCTTTGTGCATTCTCTGAATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTAAGGCTCCATCATAAAGTGTTTTCGGTGTTAAAGACCAAACAGGAAAGAAGCCACGCTAACCACTaGAGCCACCACATAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLRLHHKVFSVLKTKQERSHANH*SHHIEC Trigger: GCACTCTATGTGGTGGCTGCAGTGGTTAGCGTGGCT...TCTTTCCTGTTTGGTCTTTAACACCGAAAACACTTTATGATGGAGCCTTAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| CDS-3UTR CCA 90 bp | TTGTTAAGGCTCCATCATAAAGTGTTTTCGGTGTTAAAGACCAAACAGGAAAGAATGCCCCTGAGTACTTaGCTCTGGCTGGGCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLRLHHKVFSVLKTKQERMPLST*LWLGFT Trigger: AGTGAAGCCCAGCCAGAGCCAAGTACTCAGGGGCAT...TCTTTCCTGTTTGGTCTTTAACACCGAAAACACTTTATGATGGAGCCTTAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAGCAAAAACCAAAAAGCTTCACTACCTGCACACGCGCGTTTGGAGTGTCGTCCAGCCTATTCCATTaGAAAACTCACTCATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LKQKPKSFTTCTRAFGVSSSLFH*KTHSSL Trigger: CAGTGATGAGTGAGTTTTCCAATGGAATAGGCTGGA...CGACACTCCAAACGCGCGTGTGCAGGTAGTGAAGCTTTTTGGTTTTTGCTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| 3UTR CAA 72 bp | GTCCGTGAGGAGAACTTCTCCTTTGTTCAAAAACCTTaGAACAAGCTCACCTCCGAACTAAGGGATTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VREENFSFVQKP*NKLTSELRDLL Trigger: TAGCAAATCCCTTAGTTCGGAGGTGAGCTTGTTCAAAGGTTTTTGAACAAAGGAGAAGTTCTCCTCACGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR TCA 90 bp | TTTAGAAACTTAGTGTTTAAAACAGCTCAAGGGCCACCTTTTCAAGGTGCTGCCCTACAAAGTACATGTTaGTGGAGCAGACGATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FRNLVFKTAQGPPFQGAALQSTC*WSRRSG Trigger: TCCTGATCGTCTGCTCCATCAACATGTACTTTGTAG...GGCAGCACCTTGAAAAGGTGGCCCTTGAGCTGTTTTAAACACTAAGTTTCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| CDS-3UTR GCA 90 bp | TTTAGAAACTTAGTGTTTAAAACAGCTCAAGGGCCACCTTTTCAAGGTGCTGCCGCCACTGCTCCAGACTaGAAATCAGATTCGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FRNLVFKTAQGPPFQGAAATAPD*KSDSMF Trigger: AAACATCGAATCTGATTTGCAGTCTGGAGCAGTGGC...GGCAGCACCTTGAAAAGGTGGCCCTTGAGCTGTTTTAAACACTAAGTTTCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| 3UTR CAA 72 bp | ACTGTGTGTGCTCAAGATTCAACATATCAGGAAGGCTaGATATTAGCAGGGAAGTTACTAACCTCAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TVCAQDSTYQEG*ILAGKLLTSGL Trigger: TAGCCCTGAGGTTAGTAACTTCCCTGCTAATATCAAGCCTTCCTGATATGTTGAATCTTGAGCACACACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| CDS-3UTR GCA 90 bp | CATCATAAAGTGTTTTCGGTGTTAAAGACCAAACAGGAAAGAAAACCAAACAGGCATACTTCAGCAAGATaGAAGCCGGTGACCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HHKVFSVLKTKQERKPNRHTSAR*KPVTTP Trigger: TGGAGTGGTCACCGGCTTGCATCTTGCTGAAGTATG...CCTGTTTGGTTTTCTTTCCTGTTTGGTCTTTAACACCGAAAACACTTTATGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| CDS-3UTR CCA 90 bp | CAATTCAGAGAATGCACAAAGATGGCTCACAAATATAATGCCGGTAGCAGAGTTAGAAGCGCCATCGTCTaGCATCTTTTCTTTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QFRECTKMAHKYNAGSRVRSAIV*HLFFRI Trigger: GATCCTAAAGAAAAGATGCCAGACGATGGCGCTTCT...AACTCTGCTACCGGCATTATATTTGTGAGCCATCTTTGTGCATTCTCTGAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR CCA 90 bp | TTCATCGTCAGAAAGGTCCCTTTCTCATTTGTTACCCAAATAGAACAAAGACCTGGAAAGAGGTCAGCATaGGGGCTGCTGTTATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FIVRKVPFSFVTQIEQRPGKRSA*GLLLFL Trigger: CAAAAATAACAGCAGCCCCCATGCTGACCTCTTTCC...AGGTCTTTGTTCTATTTGGGTAACAAATGAGAAAGGGACCTTTCTGACGATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR GCA 90 bp | CTTCTCCTTTGTTCAAAAACCTTTGAACAAGCTCACCTCCGAACTAAGGGATTTGAGCCAATGACTTCCTaGATGTCAGAACCAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: LLLCSKTFEQAHLRTKGFEPMTS*MSEPMI Trigger: AATCATTGGTTCTGACATGCAGGAAGTCATTGGCTC...AAATCCCTTAGTTCGGAGGTGAGCTTGTTCAAAGGTTTTTGAACAAAGGAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR CAA 90 bp | CTGATGCCAACCCGTGGCCCCCACAAGCAGAAGCAGGCAGGCACTCGCGCACGCCGCACTTCCTGCTTATaGGCCCGATTCACCTGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LMPTRGPHKQKQAGTRARRTSCL*ARFTCL Trigger: TAGACAGGTGAATCGGGCCAATAAGCAGGAAGTGCG...GCGTGCGCGAGTGCCTGCCTGCTTCTGCTTGTGGGGGCCACGGGTTGGCATCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS TCA 90 bp | AGTCTCCAGTGGAATGTGGGAGGGATGAGTTGCTGTAGGCAGGGTTaGTGGCGCCAAGGCTGGCAGAGTCTCCATGGTCCCCAGAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SLQWNVGGMSCCRQG*WRQGWQSLHGPQKR Trigger: GCGCTTCTGGGGACCATGGAGACTCTGCCAGCCTTGGCGCCATCAACCCTGCCTACAGCAACTCATCCCTCCCACATTCCACTGGAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023774.12 ENSMUST00000123461.8 ENSMUST00000136168.2 ENSMUST00000138843.8 ENSMUST00000154331.2 ENSMUST00000154676.2 |
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| CDS TCA 90 bp | CCTTGGGATACTGACGGTGACATACTTCAGCAAGATGCAAGCCGGTaGCCACTCCAAGTCTCGCTGCAAGGCGCTGGAGCAGCAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PWDTDGDILQQDASR*PLQVSLQGAGAAAP Trigger: TGGGGCTGCTGCTCCAGCGCCTTGCAGCGAGACTTGGAGTGGTCACCGGCTTGCATCTTGCTGAAGTATGTCACCGTCAGTATCCCAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023774.12 ENSMUST00000123461.8 ENSMUST00000138843.8 |
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| CDS CCA 90 bp | CACCCTGGACAGGACGGCACGAACATGCCCCTGAGTACTTGGCTCTaGCTGGGCTTCACTGTAATGTACTCATATCCAAACGTGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HPGQDGTNMPLSTWL*LGFTVMYSYPNVRA Trigger: GGCCCTCACGTTTGGATATGAGTACATTACAGTGAAGCCCAGCCAGAGCCAAGTACTCAGGGGCATGTTCGTGCCGTCCTGTCCAGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023774.12 ENSMUST00000138843.8 |
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| CDS CCA 90 bp | GTGCGGCACCCTGGACAGGACGGCACGAACATGCCCCTGAGTACTTaGCTCTGGCTGGGCTTCACTGTAATGTACTCATATCCAAACGTG | + |
|
Preference number: 5 (lower is better) Translates to: VRHPGQDGTNMPLST*LWLGFTVMYSYPNV Trigger: CACGTTTGGATATGAGTACATTACAGTGAAGCCCAGCCAGAGCCAAGTACTCAGGGGCATGTTCGTGCCGTCCTGTCCAGGGTGCCGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023774.12 ENSMUST00000138843.8 |
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| CDS CCA 90 bp | AGGACATTCAGGAAGTCATTCATCCCCGTTAGGTGCTCCACATCCTaGAAGACAGCGACGAGCAGGGTGGGGATGATGGCGATAGACCGG | + |
|
Preference number: 5 (lower is better) Translates to: RTFRKSFIPVRCSTS*KTATSRVGMMAIDR Trigger: CCGGTCTATCGCCATCATCCCCACCCTGCTCGTCGCTGTCTTCCAGGATGTGGAGCACCTAACGGGGATGAATGACTTCCTGAATGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023774.12 ENSMUST00000124324.2 ENSMUST00000138843.8 |
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| CDS-3UTR CAA 90 bp | AGTACCTGCTGTCCAGGAAGACCTGAGTTTGGGTCCCCAGCACTGTGTAAAATCCATGCCCCTGAGTACTaGGCTCTGGCTGGGCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: STCCPGRPEFGSPALCKIHAPEY*ALAGLH Trigger: GTGAAGCCCAGCCAGAGCCAAGTACTCAGGGGCATG...GATTTTACACAGTGCTGGGGACCCAAACTCAGGTCTTCCTGGACAGCAGGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS GCA 90 bp | TGTAAGCTCTGCAGGACATTCAGGAAGTCATTCATCCCCGTTAGGTaGTCCACATCCTGGAAGACAGCGACGAGCAGGGTGGGGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: CKLCRTFRKSFIPVR*STSWKTATSRVGMM Trigger: CATCATCCCCACCCTGCTCGTCGCTGTCTTCCAGGATGTGGAGCACCTAACGGGGATGAATGACTTCCTGAATGTCCTGCAGAGCTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023774.12 ENSMUST00000124324.2 ENSMUST00000138843.8 |
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| CDS TCA 90 bp | CCACATGCCCTAGCTCCTGGACATAAACCACTACAAAGTACATGTTaGTGGAGCAGACGATCAGGACCAGGATGCCACCGGCAATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PHALAPGHKPLQSTC*WSRRSGPGCHRQSS Trigger: GGAGGATTGCCGGTGGCATCCTGGTCCTGATCGTCTGCTCCATCAACATGTACTTTGTAGTGGTTTATGTCCAGGAGCTAGGGCATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023774.12 ENSMUST00000124324.2 ENSMUST00000138843.8 |
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| CDS GCA 90 bp | CCTGCAGACAGGAGATTGATGGCGATGGCTGAGCCAATGACTTCCTaGATGTCAGAACCAATGATTGCCAACTCCACCATCAGCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PADRRLMAMAEPMTS*MSEPMIANSTISHR Trigger: CCTGTGGCTGATGGTGGAGTTGGCAATCATTGGTTCTGACATGCAGGAAGTCATTGGCTCAGCCATCGCCATCAATCTCCTGTCTGCAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023774.12 ENSMUST00000138843.8 |
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| CDS CCA 90 bp | ACCGGCAATCCTCCAGCCTATTCCATTGGAAAACTCACTCATCACTaGCCGCAGGCTTGTGAACGTGAGGATGGGTATGAGAGCAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TGNPPAYSIGKLTHH*PQACEREDGYESKG Trigger: CCCTTTGCTCTCATACCCATCCTCACGTTCACAAGCCTGCGGCCAGTGATGAGTGAGTTTTCCAATGGAATAGGCTGGAGGATTGCCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023774.12 ENSMUST00000124324.2 ENSMUST00000138843.8 |
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| CDS-3UTR CAA 90 bp | AGTCCACGAGTGCTACAGTCTTCTGCAGGCAGCACTCTCTCAGAAGAGAAAGATCCTGCAGACAGGAGATaGATGGCGATGGCTGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPRVLQSSAGSTLSEEKDPADRR*MAMAEP Trigger: TGGCTCAGCCATCGCCATCAATCTCCTGTCTGCAGG...ATCTTTCTCTTCTGAGAGAGTGCTGCCTGCAGAAGACTGTAGCACTCGTGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| CDS-3UTR CAA 90 bp | ACTAAAGCCTCCTTGAAGCCACTTGCTGCCGACCTGGCAGGATCTCACAAGACACGCACTTCCTGCTTATaGGCCCGATTCACCTGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: TKASLKPLAADLAGSHKTRTSCL*ARFTCL Trigger: TAGACAGGTGAATCGGGCCAATAAGCAGGAAGTGCG...TGTCTTGTGAGATCCTGCCAGGTCGGCAGCAAGTGGCTTCAAGGAGGCTTTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| CDS-3UTR CAA 90 bp | GTGGGAAGAAAGGGCAGGTGGACAGACACCAACGGAACAACAGCCACAGACACAGGGCTGCTGTTATTTTaGCAGACTTCAACCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VGRKGRWTDTNGTTATDTGLLLF*QTSTTC Trigger: GCAGGTGGTTGAAGTCTGCAAAAATAACAGCAGCCC...TGTGTCTGTGGCTGTTGTTCCGTTGGTGTCTGTCCACCTGCCCTTTCTTCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR CAA 90 bp | ACATATCGATACACTTTAAACCCCAGAAGTGCAGACACAAGCCTGAGGGACTGCCCTGCAGACAGGAGATaGATGGCGATGGCTGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TYRYTLNPRSADTSLRDCPADRR*MAMAEP Trigger: TGGCTCAGCCATCGCCATCAATCTCCTGTCTGCAGG...GCAGTCCCTCAGGCTTGTGTCTGCACTTCTGGGGTTTAAAGTGTATCGATATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR CAA 90 bp | ACTGCCTCCGAAGGGTCTCTGACCCATACGCAACTGTCAGCTTTTACCCTGAGTATGAAGAAGTACTTATaGGCTTCCCGCACTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TASEGSLTHTQLSAFTLSMKKYL*ASRTSC Trigger: GCAGGAAGTGCGGGAAGCCAATAAGTACTTCTTCAT...ACTCAGGGTAAAAGCTGACAGTTGCGTATGGGTCAGAGACCCTTCGGAGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR CAA 90 bp | AAAAATCCTGAACCAGCAGGGCAGTGGAGGTGTCTGCCTCTAATCCTAGCACTCGGGCTGCTGTTATTTTaGCAGACTTCAACCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KNPEPAGQWRCLPLILALGLLLF*QTSTTC Trigger: GCAGGTGGTTGAAGTCTGCAAAAATAACAGCAGCCC...GAGTGCTAGGATTAGAGGCAGACACCTCCACTGCCCTGCTGGTTCAGGATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| CDS-3UTR CAA 90 bp | AAGTATGGCGAATCTGGATACACTCTGCTCGCCCCACCCCATCCCTGTACAAATACAGCCAGAGTAGAGTaGTCACTGGGAAAGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KYGESGYTLLAPPHPCTNTARVE*SLGKRS Trigger: TGACCTCTTTCCCAGTGACAACTCTACTCTGGCTGT...ATTTGTACAGGGATGGGGTGGGGCGAGCAGAGTGTATCCAGATTCGCCATACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS GCA 90 bp | TCCCAGGCGGTACGAGCGTCCACAGTCCAGGAAAGACAGACCCAATaGAATCAAACACTGCCAACCCAAGTAGAACACAAAGGTCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: SQAVRASTVQERQTQ*NQTLPTQVEHKGQI Trigger: TATTTGACCTTTGTGTTCTACTTGGGTTGGCAGTGTTTGATTGCATTGGGTCTGTCTTTCCTGGACTGTGGACGCTCGTACCGCCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR CAA 90 bp | TTGCAAGGTTTGGGTCCAGAGCTCCTGAGATTGCCTTCTGAGTTATCTTGGGCGATGAAGAAGTACTTATaGGCTTCCCGCACTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LQGLGPELLRLPSELSWAMKKYL*ASRTSC Trigger: GCAGGAAGTGCGGGAAGCCAATAAGTACTTCTTCAT...CGCCCAAGATAACTCAGAAGGCAATCTCAGGAGCTCTGGACCCAAACCTTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR CAA 90 bp | GCCCACTGCCTCCGAAGGGTCTCTGACCCATACGCAACTGTCAGCTTTTACCCTGACACGACAAAGACATaGATGATGAAGGAAACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AHCLRRVSDPYATVSFYPDTTKT*MMKETK Trigger: CTTTGTTTCCTTCATCATCAATGTCTTTGTCGTGTC...AGGGTAAAAGCTGACAGTTGCGTATGGGTCAGAGACCCTTCGGAGGCAGTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
||
| CDS-3UTR CAA 90 bp | GAATTCTGCTGCCGTCAGCCTGGCCCTCAAGCACTGCACAGGTTCAAAAGCTCAGACACGACAAAGACATaGATGATGAAGGAAACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EFCCRQPGPQALHRFKSSDTTKT*MMKETK Trigger: CTTTGTTTCCTTCATCATCAATGTCTTTGTCGTGTC...TGAGCTTTTGAACCTGTGCAGTGCTTGAGGGCCAGGCTGACGGCAGCAGAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS GCA 90 bp | CGAGATGCTTACCGAGCGTCCACAGTCCAGGAAAGACAGACCCAATaGAATCAAACACTGCCAACCCAAGTAGAACACAAAGGTCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: RDAYRASTVQERQTQ*NQTLPTQVEHKGQI Trigger: TATTTGACCTTTGTGTTCTACTTGGGTTGGCAGTGTTTGATTGCATTGGGTCTGTCTTTCCTGGACTGTGGACGCTCGGTAAGCATCTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR CAA 90 bp | GACAGTCTGGTTGCGTTTCTTTTGACTAAAAACAAGCTACTGCCCTTGGGCAGCTTCACCTGTCTAGACTaGACTAAGGCAGAATGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DSLVAFLLTKNKLLPLGSFTCLD*TKAECR Trigger: CCTGCATTCTGCCTTAGTCAAGTCTAGACAGGTGAA...GCTGCCCAAGGGCAGTAGCTTGTTTTTAGTCAAAAGAAACGCAACCAGACTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
||
| CDS-3UTR CAA 90 bp | TTAAAGCAAAAACCAAAAAGCTTCACTACCTGCACACGCGCGTTTGGAGTGTCGACAGCCAGAGTAGAGTaGTCACTGGGAAAGAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LKQKPKSFTTCTRAFGVSTARVE*SLGKRS Trigger: TGACCTCTTTCCCAGTGACAACTCTACTCTGGCTGT...CGACACTCCAAACGCGCGTGTGCAGGTAGTGAAGCTTTTTGGTTTTTGCTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR CAA 90 bp | CATCATAAAGTGTTTTCGGTGTTAAAGACCAAACAGGAAAGAAAACCAAACAGGCATGCCCCTGAGTACTaGGCTCTGGCTGGGCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: HHKVFSVLKTKQERKPNRHAPEY*ALAGLH Trigger: GTGAAGCCCAGCCAGAGCCAAGTACTCAGGGGCATG...CCTGTTTGGTTTTCTTTCCTGTTTGGTCTTTAACACCGAAAACACTTTATGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| CDS-3UTR CAA 90 bp | AAATACATATCGATACACTTTAAACCCCAGAAGTGCAGACACAAGCCTGAGGGAGAATGCAGGTACATGTaGTGCGGCATGATCACAGCT | + |
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Preference number: 5 (lower is better) Translates to: KYISIHFKPQKCRHKPEGECRYM*CGMITA Trigger: AGCTGTGATCATGCCGCACAACATGTACCTGCATTC...TCCCTCAGGCTTGTGTCTGCACTTCTGGGGTTTAAAGTGTATCGATATGTATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR CAA 90 bp | CTTCTCCTTTGTTCAAAAACCTTTGAACAAGCTCACCTCCGAACTAAGGGATTTTTCACCTGTCTAGACTaGACTAAGGCAGAATGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LLLCSKTFEQAHLRTKGFFTCLD*TKAECR Trigger: CCTGCATTCTGCCTTAGTCAAGTCTAGACAGGTGAA...AAATCCCTTAGTTCGGAGGTGAGCTTGTTCAAAGGTTTTTGAACAAAGGAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR CAA 90 bp | AAAATCTTACCCAAACTGGCACGTTTGGGTTCACATAAATACATATCGATACACACTACAAAGTACATGTaGATGGAGCAGACGATCAGG | + |
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Preference number: 5 (lower is better) Translates to: KILPKLARLGSHKYISIHTTKYM*MEQTIR Trigger: CCTGATCGTCTGCTCCATCAACATGTACTTTGTAGT...GTGTATCGATATGTATTTATGTGAACCCAAACGTGCCAGTTTGGGTAAGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS-3UTR CAA 90 bp | TTGTTAAGGCTCCATCATAAAGTGTTTTCGGTGTTAAAGACCAAACAGGAAAGAACTACAAAGTACATGTaGATGGAGCAGACGATCAGG | + |
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Preference number: 5 (lower is better) Translates to: LLRLHHKVFSVLKTKQERTTKYM*MEQTIR Trigger: CCTGATCGTCTGCTCCATCAACATGTACTTTGTAGT...TCTTTCCTGTTTGGTCTTTAACACCGAAAACACTTTATGATGGAGCCTTAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| CDS TCA 72 bp | TGGAATGTGGGAGGGATGAGTTGCTGTAGGCAGGGTTaGTGGCGCCAAGGCTGGCAGAGTCTCCATGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: WNVGGMSCCRQG*WRQGWQSLHGP Trigger: GGGACCATGGAGACTCTGCCAGCCTTGGCGCCATCAACCCTGCCTACAGCAACTCATCCCTCCCACATTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000023774.12 ENSMUST00000123461.8 ENSMUST00000136168.2 ENSMUST00000138843.8 ENSMUST00000154331.2 ENSMUST00000154676.2 |
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| CDS CCA 72 bp | GCAGGGTTGATGGCGCCAAGGCTGGCAGAGTCTCCATaGTCCCCAGAAGCGCCATCGTCTGGCATCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: AGLMAPRLAESP*SPEAPSSGIFS Trigger: AGAAAAGATGCCAGACGATGGCGCTTCTGGGGACCATGGAGACTCTGCCAGCCTTGGCGCCATCAACCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023774.12 ENSMUST00000123461.8 ENSMUST00000138843.8 ENSMUST00000154331.2 ENSMUST00000154676.2 |
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| CDS CCA 72 bp | AGGAAGTCATTCATCCCCGTTAGGTGCTCCACATCCTaGAAGACAGCGACGAGCAGGGTGGGGATGATGGCG | + |
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Preference number: 6 (lower is better) Translates to: RKSFIPVRCSTS*KTATSRVGMMA Trigger: CGCCATCATCCCCACCCTGCTCGTCGCTGTCTTCCAGGATGTGGAGCACCTAACGGGGATGAATGACTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023774.12 ENSMUST00000124324.2 ENSMUST00000138843.8 |
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| CDS CAA 90 bp | GGTGCGGCACCCTGGACAGGACGGCACGAACATGCCCCTGAGTACTaGGCTCTGGCTGGGCTTCACTGTAATGTACTCATATCCAAACGT | + |
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Preference number: 6 (lower is better) Translates to: GAAPWTGRHEHAPEY*ALAGLHCNVLISKR Trigger: ACGTTTGGATATGAGTACATTACAGTGAAGCCCAGCCAGAGCCAAGTACTCAGGGGCATGTTCGTGCCGTCCTGTCCAGGGTGCCGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023774.12 ENSMUST00000138843.8 |
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| CDS CAA 90 bp | ACGATCAGGACCAGGATGCCACCGGCAATCCTCCAGCCTATTCCATaGGAAAACTCACTCATCACTGGCCGCAGGCTTGTGAACGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: TIRTRMPPAILQPIP*ENSLITGRRLVNVR Trigger: CCTCACGTTCACAAGCCTGCGGCCAGTGATGAGTGAGTTTTCCAATGGAATAGGCTGGAGGATTGCCGGTGGCATCCTGGTCCTGATCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023774.12 ENSMUST00000124324.2 ENSMUST00000138843.8 |
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| CDS GCA 72 bp | TGCAGGACATTCAGGAAGTCATTCATCCCCGTTAGGTaGTCCACATCCTGGAAGACAGCGACGAGCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: CRTFRKSFIPVR*STSWKTATSRV Trigger: CACCCTGCTCGTCGCTGTCTTCCAGGATGTGGAGCACCTAACGGGGATGAATGACTTCCTGAATGTCCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023774.12 ENSMUST00000124324.2 ENSMUST00000138843.8 |
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| CDS GCA 72 bp | CACCGCTGGTATCTTCGCTCAGCAGGACTTTCGAGATaGTTACCGAGCGTCCACAGTCCAGGAAAGACAGAC | + |
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Preference number: 6 (lower is better) Translates to: HRWYLRSAGLSR*LPSVHSPGKTD Trigger: GTCTGTCTTTCCTGGACTGTGGACGCTCGGTAAGCATCTCGAAAGTCCTGCTGAGCGAAGATACCAGCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| CDS CAA 72 bp | CCCTGGACAGGACGGCACGAACATGCCCCTGAGTACTaGGCTCTGGCTGGGCTTCACTGTAATGTACTCATA | + |
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Preference number: 6 (lower is better) Translates to: PWTGRHEHAPEY*ALAGLHCNVLI Trigger: TATGAGTACATTACAGTGAAGCCCAGCCAGAGCCAAGTACTCAGGGGCATGTTCGTGCCGTCCTGTCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023774.12 ENSMUST00000138843.8 |
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| CDS CAA 72 bp | ACCAGGATGCCACCGGCAATCCTCCAGCCTATTCCATaGGAAAACTCACTCATCACTGGCCGCAGGCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: TRMPPAILQPIP*ENSLITGRRLV Trigger: CACAAGCCTGCGGCCAGTGATGAGTGAGTTTTCCAATGGAATAGGCTGGAGGATTGCCGGTGGCATCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023774.12 ENSMUST00000124324.2 ENSMUST00000138843.8 |
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| CDS CCA 72 bp | CCTGGACAGGACGGCACGAACATGCCCCTGAGTACTTaGCTCTGGCTGGGCTTCACTGTAATGTACTCATAT | + |
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Preference number: 6 (lower is better) Translates to: PGQDGTNMPLST*LWLGFTVMYSY Trigger: ATATGAGTACATTACAGTGAAGCCCAGCCAGAGCCAAGTACTCAGGGGCATGTTCGTGCCGTCCTGTCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023774.12 ENSMUST00000138843.8 |
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| CDS GCA 72 bp | GCCCGATTCACCTGTCTAGACTTGACTAAGGCAGAATaGAGGTACATGTTGTGCGGCATGATCACAGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: ARFTCLDLTKAE*RYMLCGMITAP Trigger: GGGAGCTGTGATCATGCCGCACAACATGTACCTGCATTCTGCCTTAGTCAAGTCTAGACAGGTGAATCGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023774.12 ENSMUST00000138843.8 |
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| CDS CCA 72 bp | CAGGACGGCACGAACATGCCCCTGAGTACTTGGCTCTaGCTGGGCTTCACTGTAATGTACTCATATCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: QDGTNMPLSTWL*LGFTVMYSYPN Trigger: GTTTGGATATGAGTACATTACAGTGAAGCCCAGCCAGAGCCAAGTACTCAGGGGCATGTTCGTGCCGTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023774.12 ENSMUST00000138843.8 |
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| CDS CCA 72 bp | GGCAGAGTCTCCATGGTCCCCAGAAGCGCCATCGTCTaGCATCTTTTCTTTAGGATCCAACACCATGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: GRVSMVPRSAIV*HLFFRIQHHGR Trigger: TCTACCATGGTGTTGGATCCTAAAGAAAAGATGCCAGACGATGGCGCTTCTGGGGACCATGGAGACTCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154331.2 |
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| CDS CAA 72 bp | TGTCTAGACTTGACTAAGGCAGAATGCAGGTACATGTaGTGCGGCATGATCACAGCTCCCACGATGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: CLDLTKAECRYM*CGMITAPTMPT Trigger: GGTGGGCATCGTGGGAGCTGTGATCATGCCGCACAACATGTACCTGCATTCTGCCTTAGTCAAGTCTAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023774.12 ENSMUST00000138843.8 |
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| CDS TCA 72 bp | CTAGCTCCTGGACATAAACCACTACAAAGTACATGTTaGTGGAGCAGACGATCAGGACCAGGATGCCACCGG | + |
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Preference number: 6 (lower is better) Translates to: LAPGHKPLQSTC*WSRRSGPGCHR Trigger: CCGGTGGCATCCTGGTCCTGATCGTCTGCTCCATCAACATGTACTTTGTAGTGGTTTATGTCCAGGAGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023774.12 ENSMUST00000124324.2 ENSMUST00000138843.8 |
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| CDS CAA 72 bp | AAGAGCGCGATGCAGGACTCGATGAAGAAGTACTTATaGGCTTCCCGCACTTCCTGCTTATTGGCCCGATTC | + |
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Preference number: 6 (lower is better) Translates to: KSAMQDSMKKYL*ASRTSCLLARF Trigger: GAATCGGGCCAATAAGCAGGAAGTGCGGGAAGCCAATAAGTACTTCTTCATCGAGTCCTGCATCGCGCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023774.12 ENSMUST00000138843.8 |
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| CDS GCA 72 bp | AGGAGATTGATGGCGATGGCTGAGCCAATGACTTCCTaGATGTCAGAACCAATGATTGCCAACTCCACCATC | + |
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Preference number: 6 (lower is better) Translates to: RRLMAMAEPMTS*MSEPMIANSTI Trigger: GATGGTGGAGTTGGCAATCATTGGTTCTGACATGCAGGAAGTCATTGGCTCAGCCATCGCCATCAATCTCCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023774.12 ENSMUST00000138843.8 |
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| CDS CAA 90 bp | GACTCGATGAAGAAGTACTTATTGGCTTCCCGCACTTCCTGCTTATaGGCCCGATTCACCTGTCTAGACTTGACTAAGGCAGAATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: DSMKKYLLASRTSCL*ARFTCLDLTKAECR Trigger: CCTGCATTCTGCCTTAGTCAAGTCTAGACAGGTGAATCGGGCCAATAAGCAGGAAGTGCGGGAAGCCAATAAGTACTTCTTCATCGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023774.12 ENSMUST00000138843.8 |
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| CDS CAA 90 bp | AAGGAAACAAAGAGCGCGATGCAGGACTCGATGAAGAAGTACTTATaGGCTTCCCGCACTTCCTGCTTATTGGCCCGATTCACCTGTCTA | + |
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Preference number: 6 (lower is better) Translates to: KETKSAMQDSMKKYL*ASRTSCLLARFTCL Trigger: TAGACAGGTGAATCGGGCCAATAAGCAGGAAGTGCGGGAAGCCAATAAGTACTTCTTCATCGAGTCCTGCATCGCGCTCTTTGTTTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023774.12 ENSMUST00000138843.8 |
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| CDS GCA 72 bp | GTACGAGCGTCCACAGTCCAGGAAAGACAGACCCAATaGAATCAAACACTGCCAACCCAAGTAGAACACAAA | + |
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Preference number: 6 (lower is better) Translates to: VRASTVQERQTQ*NQTLPTQVEHK Trigger: TTTGTGTTCTACTTGGGTTGGCAGTGTTTGATTGCATTGGGTCTGTCTTTCCTGGACTGTGGACGCTCGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023774.12 |
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| CDS GCA 72 bp | TACCGAGCGTCCACAGTCCAGGAAAGACAGACCCAATaGAATCAAACACTGCCAACCCAAGTAGAACACAAA | + |
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Preference number: 6 (lower is better) Translates to: YRASTVQERQTQ*NQTLPTQVEHK Trigger: TTTGTGTTCTACTTGGGTTGGCAGTGTTTGATTGCATTGGGTCTGTCTTTCCTGGACTGTGGACGCTCGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138843.8 |
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| CDS CAA 72 bp | AAGAAGTACTTATTGGCTTCCCGCACTTCCTGCTTATaGGCCCGATTCACCTGTCTAGACTTGACTAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: KKYLLASRTSCL*ARFTCLDLTKA Trigger: TGCCTTAGTCAAGTCTAGACAGGTGAATCGGGCCAATAAGCAGGAAGTGCGGGAAGCCAATAAGTACTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023774.12 ENSMUST00000138843.8 |
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