Pregenerated sensors for SLC11A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026177Ensembl transcript IDs: ENSMUST00000027368.6, ENSMUST00000187516.7
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCTCCCTTCATCTTCCACGAGCTGGAGTGAGACAATGGAGTTGTaGCAGTTCTGTTTGAGGTGTTCTGGGAACTGGAGTCACCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: LLPSSSTSWSETMEL*QFCLRCSGNWSHLQ Trigger: CTGAAGGTGACTCCAGTTCCCAGAACACCTCAAACAGAACTGCCACAACTCCATTGTCTCACTCCAGCTCGTGGAAGATGAAGGGAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| 3UTR CCA 90 bp | AAGAGGGATCCCATTATGGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCCGGTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: KRDPIMDGCEPPCGC*ELNSGPLEEQSGAL Trigger: AAGAGCACCGGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATGGGATCCCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| 3UTR TCA 90 bp | ATCCCATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTaGACTCAGGACCTCTGGAAGAGCAGTCCGGTGCTCTTAACAGCT | + |
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Preference number: 1 (lower is better) Translates to: IPLWMVVSHHVVAGN*TQDLWKSSPVLLTA Trigger: AGCTGTTAAGAGCACCGGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| 3UTR-3UTR GCA 90 bp | GGGTGGTGGCTAGTGTTCTTCACACCTGAGCCATCTCTCGCCCCAGGCACTGTGGACCTCCAATTGCTCTaGTGTGTCTGCCCTGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: GWWLVFFTPEPSLAPGTVDLQLL*CVCPVA Trigger: GGCAACAGGGCAGACACAGCAGAGCAATTGGAGGTC...CACAGTGCCTGGGGCGAGAGATGGCTCAGGTGTGAAGAACACTAGCCACCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| 3UTR-3UTR GCA 90 bp | TGGTGGCTAGTGTTCTTCACACCTGAGCCATCTCTCGCCCCAGGCACTGTGTTTGACCTCCAATTGCTCTaGTGTGTCTGCCCTGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: WWLVFFTPEPSLAPGTVFDLQLL*CVCPVA Trigger: GGCAACAGGGCAGACACAGCAGAGCAATTGGAGGTC...AAACACAGTGCCTGGGGCGAGAGATGGCTCAGGTGTGAAGAACACTAGCCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| 3UTR-3UTR TCA 90 bp | CAGTTCTGTTTGAGGTGTTCTGGGAACTGGAGTCACCTTCAGTTGAAAGCCACCAGTGTTCTTCACACCTaGGCCATCTCTCGCCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: QFCLRCSGNWSHLQLKATSVLHT*AISRPR Trigger: CCTGGGGCGAGAGATGGCTCAGGTGTGAAGAACACT...GGTGGCTTTCAACTGAAGGTGACTCCAGTTCCCAGAACACCTCAAACAGAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| 3UTR CAA 90 bp | GGACTCCTCCCTTCATCTTCCACGAGCTGGAGTGAGACAATGGAGTaGTGGCAGTTCTGTTTGAGGTGTTCTGGGAACTGGAGTCACCTT | + |
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Preference number: 2 (lower is better) Translates to: GLLPSSSTSWSETME*WQFCLRCSGNWSHL Trigger: AAGGTGACTCCAGTTCCCAGAACACCTCAAACAGAACTGCCACAACTCCATTGTCTCACTCCAGCTCGTGGAAGATGAAGGGAGGAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| 3UTR CAA 90 bp | GATCCCATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAGCAGTCCGGTGCTCTTAACAGC | + |
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Preference number: 2 (lower is better) Translates to: DPIMDGCEPPCGCWE*NSGPLEEQSGALNS Trigger: GCTGTTAAGAGCACCGGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATGGGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGCTAGTGTTCTTCACACCTGAGCCATCTCTCGCCCCAGGCACTGTGTTTAGCACTTGTCCAAACTaGAAACCGGTAATCCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: WWLVFFTPEPSLAPGTVFSTCPN*KPVIQK Trigger: TTTCTGGATTACCGGTTTCCAGTTTGGACAAGTGCT...AAACACAGTGCCTGGGGCGAGAGATGGCTCAGGTGTGAAGAACACTAGCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| 3UTR CAA 90 bp | TGGCAGTTCTGTTTGAGGTGTTCTGGGAACTGGAGTCACCTTCAGTaGAAAGCCACCACGTTGATGCTGGGAATTGAATCCCCATCTTCT | + |
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Preference number: 2 (lower is better) Translates to: WQFCLRCSGNWSHLQ*KATTLMLGIESPSS Trigger: AGAAGATGGGGATTCAATTCCCAGCATCAACGTGGTGGCTTTCAACTGAAGGTGACTCCAGTTCCCAGAACACCTCAAACAGAACTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| 3UTR-3UTR GCA 90 bp | TGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACATTGCTCTGCTGTGTCTaGCCTGTTGCCTCTTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: CWELNPHLLKGWWLVFFTLLCCV*PVASLL Trigger: AAGCAAAGAGGCAACAGGGCAGACACAGCAGAGCAA...TGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| 3UTR-3UTR CCA 90 bp | CAGTTCTGTTTGAGGTGTTCTGGGAACTGGAGTCACCTTCAGTTGAAAGCCACCCATCTTCTGAAAGGGTaGTGGCTAGTGTTCTTCACA | + |
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Preference number: 2 (lower is better) Translates to: QFCLRCSGNWSHLQLKATHLLKG*WLVFFT Trigger: TGTGAAGAACACTAGCCACCACCCTTTCAGAAGATG...GGTGGCTTTCAACTGAAGGTGACTCCAGTTCCCAGAACACCTCAAACAGAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| 3UTR-3UTR CCA 90 bp | CAGTTCTGTTTGAGGTGTTCTGGGAACTGGAGTCACCTTCAGTTGAAAGCCACCAGCACTTGTCCAAACTaGAAACCGGTAATCCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: QFCLRCSGNWSHLQLKATSTCPN*KPVIQK Trigger: TTTCTGGATTACCGGTTTCCAGTTTGGACAAGTGCT...GGTGGCTTTCAACTGAAGGTGACTCCAGTTCCCAGAACACCTCAAACAGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| 3UTR-3UTR CCA 90 bp | GGACACTGTTGTTGTCTTCAGACACACCAGAAGAGGGATCCCATTATGGATGGTAGGTGTTCTGGGAACTaGAGTCACCTTCAGTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: GHCCCLQTHQKRDPIMDGRCSGN*SHLQLK Trigger: TTTCAACTGAAGGTGACTCCAGTTCCCAGAACACCT...ACCATCCATAATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| 3UTR-3UTR CAA 90 bp | TGGTGGCTAGTGTTCTTCACACCTGAGCCATCTCTCGCCCCAGGCACTGTGTTTGCTGTGTCTGCCCTGTaGCCTCTTTGCTTGCTGGAT | + |
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Preference number: 3 (lower is better) Translates to: WWLVFFTPEPSLAPGTVFAVSAL*PLCLLD Trigger: ATCCAGCAAGCAAAGAGGCAACAGGGCAGACACAGC...AAACACAGTGCCTGGGGCGAGAGATGGCTCAGGTGTGAAGAACACTAGCCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| 3UTR CCA 72 bp | TGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTaGCTAGTGTTCTTCACACCTGAGCCATCTCTCGCC | + |
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Preference number: 3 (lower is better) Translates to: CWELNPHLLKGW*LVFFTPEPSLA Trigger: GGCGAGAGATGGCTCAGGTGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| 3UTR CCA 72 bp | CCCATTATGGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: PIMDGCEPPCGC*ELNSGPLEEQS Trigger: GGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| 3UTR TCA 72 bp | TTTAGGACTCCTCCCTTCATCTTCCACGAGCTGGAGTaGGACAATGGAGTTGTGGCAGTTCTGTTTGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: FRTPPFIFHELE*DNGVVAVLFEV Trigger: CACCTCAAACAGAACTGCCACAACTCCATTGTCTCACTCCAGCTCGTGGAAGATGAAGGGAGGAGTCCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| 3UTR CCA 72 bp | GACAATGGAGTTGTGGCAGTTCTGTTTGAGGTGTTCTaGGAACTGGAGTCACCTTCAGTTGAAAGCCACCAC | + |
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Preference number: 3 (lower is better) Translates to: DNGVVAVLFEVF*ELESPSVESHH Trigger: GTGGTGGCTTTCAACTGAAGGTGACTCCAGTTCCCAGAACACCTCAAACAGAACTGCCACAACTCCATTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| 3UTR CCA 72 bp | GTTGTCTTCAGACACACCAGAAGAGGGATCCCATTATaGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAT | + |
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Preference number: 3 (lower is better) Translates to: VVFRHTRRGIPL*MVVSHHVVAGN Trigger: ATTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATGGGATCCCTCTTCTGGTGTGTCTGAAGACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| 3UTR-3UTR CAA 90 bp | GTGATAAGAATGGTGTCATTATTCCGAGGTAAAGCACTTGTCCAAACTGGAAACGCTGTGTCTGCCCTGTaGCCTCTTTGCTTGCTGGAT | + |
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Preference number: 3 (lower is better) Translates to: VIRMVSLFRGKALVQTGNAVSAL*PLCLLD Trigger: ATCCAGCAAGCAAAGAGGCAACAGGGCAGACACAGC...GTTTCCAGTTTGGACAAGTGCTTTACCTCGGAATAATGACACCATTCTTATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR CCA 90 bp | GGGTGGTGGCTAGTGTTCTTCACACCTGAGCCATCTCTCGCCCCAGGCACTGTGAGGAAGGTGGCTCCGTaGGCGATGCAACAGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GWWLVFFTPEPSLAPGTVRKVAP*AMQQVQ Trigger: CTGGACCTGTTGCATCGCCCACGGAGCCACCTTCCT...CACAGTGCCTGGGGCGAGAGATGGCTCAGGTGTGAAGAACACTAGCCACCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR CCA 90 bp | GGGTGGTGGCTAGTGTTCTTCACACCTGAGCCATCTCTCGCCCCAGGCACTGTGTGCTTGTGGGAGCTGTaGGTCAGGAAGGTGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: GWWLVFFTPEPSLAPGTVCLWEL*VRKVAP Trigger: CGGAGCCACCTTCCTGACCCACAGCTCCCACAAGCA...CACAGTGCCTGGGGCGAGAGATGGCTCAGGTGTGAAGAACACTAGCCACCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR GCA 90 bp | TGGTGGCTAGTGTTCTTCACACCTGAGCCATCTCTCGCCCCAGGCACTGTGTTTACCGACGATGCCCACTaGCTGCAGCAGCTCGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: WWLVFFTPEPSLAPGTVFTDDAH*LQQLGL Trigger: CAGCCCGAGCTGCTGCAGGCAGTGGGCATCGTCGGT...AAACACAGTGCCTGGGGCGAGAGATGGCTCAGGTGTGAAGAACACTAGCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR CCA 90 bp | GGGTGGTGGCTAGTGTTCTTCACACCTGAGCCATCTCTCGCCCCAGGCACTGTGGGATGCGGGGCACCTTaGGGTAGTAGAGATGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GWWLVFFTPEPSLAPGTVGCGAP*GSRDGR Trigger: TCTGCCATCTCTACTACCCCAAGGTGCCCCGCATCC...CACAGTGCCTGGGGCGAGAGATGGCTCAGGTGTGAAGAACACTAGCCACCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR TCA 90 bp | TGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACACGGCAAGGCGCTGGCTaGGGTGCTGGGCCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: CWELNPHLLKGWWLVFFTRQGAG*GAGPGR Trigger: CCTGCCTGGCCCAGCACCTCAGCCAGCGCCTTGCCG...TGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR CCA 90 bp | ACCACGTTGATGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTCTCCCGGCAAGGCGCTaGCTGAGGTGCTGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TTLMLGIESPSSERVVASLPARR*LRCWAR Trigger: CCTGGCCCAGCACCTCAGCCAGCGCCTTGCCGGGAG...ACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCATCAACGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| CDS-3UTR CCA 90 bp | CTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACACCCTCCCGGCAAGGCGCTaGCTGAGGTGCTGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGIESPSSERVVASVLHTLPARR*LRCWAR Trigger: CCTGGCCCAGCACCTCAGCCAGCGCCTTGCCGGGAG...GGTGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR GCA 90 bp | ACCACGTTGATGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTTGCAGCAGCTCGGGCTaGCCACAGCCCGGACAGGTG | + |
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Preference number: 4 (lower is better) Translates to: TTLMLGIESPSSERVVASCSSSG*PQPGQV Trigger: CACCTGTCCGGGCTGTGGGCAGCCCGAGCTGCTGCA...ACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCATCAACGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| CDS-3UTR GCA 90 bp | CTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACACCTGCAGCAGCTCGGGCTaGCCACAGCCCGGACAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LGIESPSSERVVASVLHTCSSSG*PQPGQV Trigger: CACCTGTCCGGGCTGTGGGCAGCCCGAGCTGCTGCA...GGTGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR CCA 90 bp | GGGTGGTGGCTAGTGTTCTTCACACCTGAGCCATCTCTCGCCCCAGGCACTGTGCCGATAGGGCGATGGTaGCCTCAATCAGGAAGTACA | + |
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Preference number: 4 (lower is better) Translates to: GWWLVFFTPEPSLAPGTVPIGRW*PQSGST Trigger: TGTACTTCCTGATTGAGGCCACCATCGCCCTATCGG...CACAGTGCCTGGGGCGAGAGATGGCTCAGGTGTGAAGAACACTAGCCACCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR GCA 90 bp | GATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAACGTCCCACAGCGGGATaGGTCCAGCGGAGAGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: DGCEPPCGCWELNSGPLERPTAG*VQRRAD Trigger: ATCTGCTCTCCGCTGGACGCATCCCGCTGTGGGACG...TTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| CDS-3UTR GCA 90 bp | GGGTGGTGGCTAGTGTTCTTCACACCTGAGCCATCTCTCGCCCCAGGCACTGTGAGCCCATATAAGAAGTaGTTGTGGGAGCTGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: GWWLVFFTPEPSLAPGTVSPYKK*LWELWV Trigger: GACCCACAGCTCCCACAAGCACTTCTTATATGGGCT...CACAGTGCCTGGGGCGAGAGATGGCTCAGGTGTGAAGAACACTAGCCACCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR TCA 90 bp | GGGTGGTGGCTAGTGTTCTTCACACCTGAGCCATCTCTCGCCCCAGGCACTGTGAGACTTGACCAAGGCTaGGTGCAGGTAGATGTTATG | + |
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Preference number: 4 (lower is better) Translates to: GWWLVFFTPEPSLAPGTVRLDQG*VQVDVM Trigger: CATAACATCTACCTGCACTCAGCCTTGGTCAAGTCT...CACAGTGCCTGGGGCGAGAGATGGCTCAGGTGTGAAGAACACTAGCCACCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR GCA 90 bp | GATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAACTTCACCCAAGTCCTTaGCTGTCACCACGCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: DGCEPPCGCWELNSGPLELHPSP*LSPRPA Trigger: GGCTGGGCGTGGTGACAGGCAAGGACTTGGGTGAAG...TTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| CDS-3UTR GCA 90 bp | ACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGTAGGGGACCTCCAATTCCCTGCACGCCTCCCTaGTCCTCGTTAGGGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: TCPNWKPVIQKASRGPPIPCTPP*SSLGSP Trigger: TGGGCTCCCTAACGAGGAGCAGGGAGGCGTGCAGGG...AATTGGAGGTCCCCTACTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR CCA 90 bp | TGGTGGCTAGTGTTCTTCACACCTGAGCCATCTCTCGCCCCAGGCACTGTGTTTGGTCTGCGCTGGGAATaGGGATCTTCTCACTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: WWLVFFTPEPSLAPGTVFGLRWE*GSSHSG Trigger: ACCTGAGTGAGAAGATCCCCATTCCCAGCGCAGACC...AAACACAGTGCCTGGGGCGAGAGATGGCTCAGGTGTGAAGAACACTAGCCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR CCA 90 bp | GGGTGGTGGCTAGTGTTCTTCACACCTGAGCCATCTCTCGCCCCAGGCACTGTGTCAGGAAGTACATGTTaGCTTCTCGAACATCCACCC | + |
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Preference number: 4 (lower is better) Translates to: GWWLVFFTPEPSLAPGTVSGSTC*LLEHPP Trigger: GGGTGGATGTTCGAGAAGCCAACATGTACTTCCTGA...CACAGTGCCTGGGGCGAGAGATGGCTCAGGTGTGAAGAACACTAGCCACCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR TCA 90 bp | GTTGTGGTGATAAGAATGGTGTCATTATTCCGAGGTAAAGCACTTGTCCAAACTCGGCAAGGCGCTGGCTaGGGTGCTGGGCCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VVVIRMVSLFRGKALVQTRQGAG*GAGPGR Trigger: CCTGCCTGGCCCAGCACCTCAGCCAGCGCCTTGCCG...AGTTTGGACAAGTGCTTTACCTCGGAATAATGACACCATTCTTATCACCACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR TCA 90 bp | GGACACTGTTGTTGTCTTCAGACACACCAGAAGAGGGATCCCATTATGGATGGTGGAAACCAGGCCCCGTaGACGCCCACAGCTTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: GHCCCLQTHQKRDPIMDGGNQAP*TPTASS Trigger: TGAGGAAGCTGTGGGCGTTCACGGGGCCTGGTTTCC...ACCATCCATAATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| CDS-3UTR TCA 90 bp | TGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACAGCACCCAGAGGAGTTTaGACCCAGCCACAGCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: CWELNPHLLKGWWLVFFTAPRGV*TQPQRQ Trigger: CTGGCGCTGTGGCTGGGTTCAAACTCCTCTGGGTGC...TGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| CDS-3UTR CCA 90 bp | ACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGTAGGGGACCTCCAATTCGCTGGCTGAGGTGCTaGGCCAGGCAGGCTGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: TCPNWKPVIQKASRGPPIRWLRC*ARQAGN Trigger: ATTTCCAGCCTGCCTGGCCCAGCACCTCAGCCAGCG...AATTGGAGGTCCCCTACTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR CCA 90 bp | TGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACAAGCACCCAGAGGAGCTaGTCTGCGCTGGGAATGGGG | + |
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Preference number: 4 (lower is better) Translates to: CWELNPHLLKGWWLVFFTSTQRS*SALGMG Trigger: CCCCATTCCCAGCGCAGACCAGCTCCTCTGGGTGCT...TGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187516.7 |
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| 3UTR CAA 72 bp | ATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAGCAGTCCGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: MDGCEPPCGCWE*NSGPLEEQSGA Trigger: AGCACCGGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| CDS-3UTR GCA 90 bp | TGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACACCTCTTCACCCAAGTCCTTaGCTGTCACCACGCCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: WELNPHLLKGWWLVFFTPLHPSP*LSPRPA Trigger: GGCTGGGCGTGGTGACAGGCAAGGACTTGGGTGAAG...AGGTGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS-3UTR GCA 90 bp | GGGTGGTGGCTAGTGTTCTTCACACCTGAGCCATCTCTCGCCCCAGGCACTGTGAGAAAGCTTCCAGCTTaGGCAAACCATAGTTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GWWLVFFTPEPSLAPGTVRKLPA*ANHSYP Trigger: TGGATAACTATGGTTTGCGCAAGCTGGAAGCTTTCT...CACAGTGCCTGGGGCGAGAGATGGCTCAGGTGTGAAGAACACTAGCCACCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | CAGTTCTGTTTGAGGTGTTCTGGGAACTGGAGTCACCTTCAGTTGAAAGCCACCCTGGGCCAGGCAGGCTaGAAATGGAGCCATAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QFCLRCSGNWSHLQLKATLGQAG*KWSHNW Trigger: CCAGTTATGGCTCCATTTCCAGCCTGCCTGGCCCAG...GGTGGCTTTCAACTGAAGGTGACTCCAGTTCCCAGAACACCTCAAACAGAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR CCA 90 bp | ACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGTAGGGGACCTCCAATTCAGCCACCAACACAGTaGGCAGGATGGCGCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TCPNWKPVIQKASRGPPIQPPTQ*AGWRKS Trigger: GCTCTTGCGCCATCCTGCCCACTGTGTTGGTGGCTG...AATTGGAGGTCCCCTACTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACACAGCCACCAACACAGTaGGCAGGATGGCGCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CWELNPHLLKGWWLVFFTQPPTQ*AGWRKS Trigger: GCTCTTGCGCCATCCTGCCCACTGTGTTGGTGGCTG...TGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | TGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACACCTTGTGGGTCAGGAAGGTaGCTCCGTGGGCGATGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: WELNPHLLKGWWLVFFTPCGSGR*LRGRCN Trigger: GTTGCATCGCCCACGGAGCCACCTTCCTGACCCACA...AGGTGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | ATGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACTGTGGGTCAGGAAGGTaGCTCCGTGGGCGATGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: MLGIESPSSERVVASVLHCGSGR*LRGRCN Trigger: GTTGCATCGCCCACGGAGCCACCTTCCTGACCCACA...GTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | TGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACACCTTGCTTGTGGGAGCTGTaGGTCAGGAAGGTGGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WELNPHLLKGWWLVFFTPCLWEL*VRKVAP Trigger: CGGAGCCACCTTCCTGACCCACAGCTCCCACAAGCA...AGGTGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR GCA 90 bp | TATTCCGAGGTAAAGCACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGTGCCAGGAGACCTACTaGCCAGATGTAGAGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: YSEVKHLSKLETGNPESQCQETY*PDVEGR Trigger: GCGGCCCTCTACATCTGGGCAGTAGGTCTCCTGGCA...CTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGTGCTTTACCTCGGAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR GCA 90 bp | GATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGCCCAAGTAACCTATTaGGAACAGAGCCACAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DGCEPPCGCWELNSGPLEAQVTY*EQSHKA Trigger: GGCCTTGTGGCTCTGTTCGCAATAGGTTACTTGGGC...TTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR GCA 90 bp | ATAAGAATGGTGTCATTATTCCGAGGTAAAGCACTTGTCCAAACTGGAAACCGGCCCTGCACGCCTCCCTaGTCCTCGTTAGGGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IRMVSLFRGKALVQTGNRPCTPP*SSLGSP Trigger: TGGGCTCCCTAACGAGGAGCAGGGAGGCGTGCAGGG...CCGGTTTCCAGTTTGGACAAGTGCTTTACCTCGGAATAATGACACCATTCTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR GCA 90 bp | ATGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACCCAGAGGAGCTGGTCTaGGCTGGGAATGGGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLGIESPSSERVVASVLHPEELV*AGNGDL Trigger: AAGATCCCCATTCCCAGCGCAGACCAGCTCCTCTGG...GTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | GGACACTGTTGTTGTCTTCAGACACACCAGAAGAGGGATCCCATTATGGATGGTCAGGCAGGCTGGAAATaGAGCCATAACTGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GHCCCLQTHQKRDPIMDGQAGWK*SHNWAC Trigger: GCAGGCCCAGTTATGGCTCCATTTCCAGCCTGCCTG...ACCATCCATAATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR CCA 90 bp | TGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACACCTCAGGCAGGCTGGAAATaGAGCCATAACTGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WELNPHLLKGWWLVFFTPQAGWK*SHNWAC Trigger: GCAGGCCCAGTTATGGCTCCATTTCCAGCCTGCCTG...AGGTGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | ACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGTAGGGGACCTCCAATTCTGGGCCAGGCAGGCTaGAAATGGAGCCATAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TCPNWKPVIQKASRGPPILGQAG*KWSHNW Trigger: CCAGTTATGGCTCCATTTCCAGCCTGCCTGGCCCAG...AATTGGAGGTCCCCTACTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | ACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGTAGGGGACCTCCAATTGGATGCGGGGCACCTTaGGGTAGTAGAGATGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TCPNWKPVIQKASRGPPIGCGAP*GSRDGR Trigger: TCTGCCATCTCTACTACCCCAAGGTGCCCCGCATCC...AATTGGAGGTCCCCTACTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | TATTCCGAGGTAAAGCACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGAGGAAGGTGGCTCCGTaGGCGATGCAACAGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSEVKHLSKLETGNPESQRKVAP*AMQQVQ Trigger: CTGGACCTGTTGCATCGCCCACGGAGCCACCTTCCT...CTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGTGCTTTACCTCGGAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | ATGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACGGAGCTGGTCTGCGCTaGGAATGGGGATCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MLGIESPSSERVVASVLHGAGLR*EWGSSH Trigger: GTGAGAAGATCCCCATTCCCAGCGCAGACCAGCTCC...GTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187516.7 |
||
| CDS-3UTR GCA 90 bp | GTTGTGGTGATAAGAATGGTGTCATTATTCCGAGGTAAAGCACTTGTCCAAACTACGATGCCCACTGCCTaGAGCAGCTCGGGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VVVIRMVSLFRGKALVQTTMPTA*SSSGCP Trigger: TGGGCAGCCCGAGCTGCTGCAGGCAGTGGGCATCGT...AGTTTGGACAAGTGCTTTACCTCGGAATAATGACACCATTCTTATCACCACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR GCA 90 bp | GTGATAAGAATGGTGTCATTATTCCGAGGTAAAGCACTTGTCCAAACTGGAAACACCGACGATGCCCACTaGCTGCAGCAGCTCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VIRMVSLFRGKALVQTGNTDDAH*LQQLGL Trigger: CAGCCCGAGCTGCTGCAGGCAGTGGGCATCGTCGGT...GTTTCCAGTTTGGACAAGTGCTTTACCTCGGAATAATGACACCATTCTTATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR GCA 90 bp | ATATATGTGAGGACACTGTTGTTGTCTTCAGACACACCAGAAGAGGGATCCCATTGGCTCCGTGGGCGATaGAACAGGTCCAGGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IYVRTLLLSSDTPEEGSHWLRGR*NRSRPD Trigger: ATCTGGCCTGGACCTGTTGCATCGCCCACGGAGCCA...ATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCCTCACATATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR CCA 90 bp | TGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACACCTTACCCTGGTCTGCGCTaGGAATGGGGATCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WELNPHLLKGWWLVFFTPYPGLR*EWGSSH Trigger: GTGAGAAGATCCCCATTCCCAGCGCAGACCAGGGTA...AGGTGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR CCA 90 bp | TGTGAGGACACTGTTGTTGTCTTCAGACACACCAGAAGAGGGATCCCATTATGGCAATGGCCAGCTCAATaGTCAGCCAGAGGAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: CEDTVVVFRHTRRGIPLWQWPAQ*SARGGC Trigger: GCATCCTCCTCTGGCTGACCATTGAGCTGGCCATTG...CCATAATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCCTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR CCA 90 bp | ACCACGTTGATGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTTATCTGAGCCCACAATaGCCAGCTCAATGGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TTLMLGIESPSSERVVASYLSPQ*PAQWSA Trigger: GGCTGACCATTGAGCTGGCCATTGTGGGCTCAGATA...ACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCATCAACGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR CCA 90 bp | TGTGAGGACACTGTTGTTGTCTTCAGACACACCAGAAGAGGGATCCCATTATGGTTAAGGAGCGCTCCCTaGGAAGGGTGTGCTACCACA | + |
|
Preference number: 4 (lower is better) Translates to: CEDTVVVFRHTRRGIPLWLRSAP*EGCATT Trigger: TGTGGTAGCACACCCTTCCCAGGGAGCGCTCCTTAA...CCATAATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCCTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR CCA 90 bp | ATGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACTTAAGGAGCGCTCCCTaGGAAGGGTGTGCTACCACA | + |
|
Preference number: 4 (lower is better) Translates to: MLGIESPSSERVVASVLHLRSAP*EGCATT Trigger: TGTGGTAGCACACCCTTCCCAGGGAGCGCTCCTTAA...GTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | CAGTTCTGTTTGAGGTGTTCTGGGAACTGGAGTCACCTTCAGTTGAAAGCCACCCCGATAGGGCGATGGTaGCCTCAATCAGGAAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QFCLRCSGNWSHLQLKATPIGRW*PQSGST Trigger: TGTACTTCCTGATTGAGGCCACCATCGCCCTATCGG...GGTGGCTTTCAACTGAAGGTGACTCCAGTTCCCAGAACACCTCAAACAGAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| 3UTR CAA 72 bp | CCTTCATCTTCCACGAGCTGGAGTGAGACAATGGAGTaGTGGCAGTTCTGTTTGAGGTGTTCTGGGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSSTSWSETME*WQFCLRCSGNW Trigger: CCAGTTCCCAGAACACCTCAAACAGAACTGCCACAACTCCATTGTCTCACTCCAGCTCGTGGAAGATGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR GCA 90 bp | CAGTTCTGTTTGAGGTGTTCTGGGAACTGGAGTCACCTTCAGTTGAAAGCCACCGTCCCGATGACTTCCTaGATATCTGAGCCCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: QFCLRCSGNWSHLQLKATVPMTS*ISEPTM Trigger: CATTGTGGGCTCAGATATGCAGGAAGTCATCGGGAC...GGTGGCTTTCAACTGAAGGTGACTCCAGTTCCCAGAACACCTCAAACAGAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR GCA 90 bp | ATAAGAATGGTGTCATTATTCCGAGGTAAAGCACTTGTCCAAACTGGAAACCGGTGCCAGGAGACCTACTaGCCAGATGTAGAGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IRMVSLFRGKALVQTGNRCQETY*PDVEGR Trigger: GCGGCCCTCTACATCTGGGCAGTAGGTCTCCTGGCA...CCGGTTTCCAGTTTGGACAAGTGCTTTACCTCGGAATAATGACACCATTCTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR GCA 90 bp | CAGTTCTGTTTGAGGTGTTCTGGGAACTGGAGTCACCTTCAGTTGAAAGCCACCAGCCCATATAAGAAGTaGTTGTGGGAGCTGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QFCLRCSGNWSHLQLKATSPYKK*LWELWV Trigger: GACCCACAGCTCCCACAAGCACTTCTTATATGGGCT...GGTGGCTTTCAACTGAAGGTGACTCCAGTTCCCAGAACACCTCAAACAGAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR CCA 90 bp | TATTCCGAGGTAAAGCACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGGGTCTGCGCTGGGAATaGGGATCTTCTCACTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YSEVKHLSKLETGNPESQGLRWE*GSSHSG Trigger: ACCTGAGTGAGAAGATCCCCATTCCCAGCGCAGACC...CTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGTGCTTTACCTCGGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | TGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACACCTTATCTGAGCCCACAATaGCCAGCTCAATGGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WELNPHLLKGWWLVFFTPYLSPQ*PAQWSA Trigger: GGCTGACCATTGAGCTGGCCATTGTGGGCTCAGATA...AGGTGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | GGACACTGTTGTTGTCTTCAGACACACCAGAAGAGGGATCCCATTATGGATGGTACACCGATAGGGCGATaGTGGCCTCAATCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GHCCCLQTHQKRDPIMDGTPIGR*WPQSGS Trigger: ACTTCCTGATTGAGGCCACCATCGCCCTATCGGTGT...ACCATCCATAATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR TCA 90 bp | ATATGTGAGGACACTGTTGTTGTCTTCAGACACACCAGAAGAGGGATCCCATTAGCCACAGCGCCAGCTTaGAGGTCGGACTCAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ICEDTVVVFRHTRRGIPLATAPA*RSDSMF Trigger: AAACATTGAGTCCGACCTTCAAGCTGGCGCTGTGGC...TAATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCCTCACATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR TCA 90 bp | TATTCCGAGGTAAAGCACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGTCACAAAGTACAGGTTaGTGGCGCAGACTAGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YSEVKHLSKLETGNPESQSQSTG*WRRLAP Trigger: TGGCGCTAGTCTGCGCCATCAACCTGTACTTTGTGA...CTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGTGCTTTACCTCGGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR GCA 90 bp | GGACACTGTTGTTGTCTTCAGACACACCAGAAGAGGGATCCCATTATGGATGGTCATCACGAACTGTCCTaGATAGGTGCCGGTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: GHCCCLQTHQKRDPIMDGHHELS*IGAGHS Trigger: ACTATGACCGGCACCTATGCAGGACAGTTCGTGATG...ACCATCCATAATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR GCA 90 bp | TGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACACATCACGAACTGTCCTaGATAGGTGCCGGTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: CWELNPHLLKGWWLVFFTHHELS*IGAGHS Trigger: ACTATGACCGGCACCTATGCAGGACAGTTCGTGATG...TGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR GCA 90 bp | CAGTTCTGTTTGAGGTGTTCTGGGAACTGGAGTCACCTTCAGTTGAAAGCCACCGGCAGCAGTAGACTCTaGAGAACATTGAGTAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: QFCLRCSGNWSHLQLKATGSSRL*RTLSRS Trigger: CGATCTACTCAATGTTCTGCAGAGTCTACTGCTGCC...GGTGGCTTTCAACTGAAGGTGACTCCAGTTCCCAGAACACCTCAAACAGAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR GCA 90 bp | GTTGTGGTGATAAGAATGGTGTCATTATTCCGAGGTAAAGCACTTGTCCAAACTTGGCTCCGTGGGCGATaGAACAGGTCCAGGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VVVIRMVSLFRGKALVQTWLRGR*NRSRPD Trigger: ATCTGGCCTGGACCTGTTGCATCGCCCACGGAGCCA...AGTTTGGACAAGTGCTTTACCTCGGAATAATGACACCATTCTTATCACCACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | TGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACACCTCTCCTGCATGACAGCTaGCATGCTGGTGAAAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WELNPHLLKGWWLVFFTPLLHDS*HAGESQ Trigger: TTGACTTTCACCAGCATGCCAGCTGTCATGCAGGAG...AGGTGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | CTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACACCTATAAGAAGTGCTTGTaGGAGCTGTGGGTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGIESPSSERVVASVLHTYKKCL*ELWVRK Trigger: CTTCCTGACCCACAGCTCCCACAAGCACTTCTTATA...GGTGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR TCA 90 bp | TGTGAGGACACTGTTGTTGTCTTCAGACACACCAGAAGAGGGATCCCATTATGGAGACTTGACCAAGGCTaGGTGCAGGTAGATGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: CEDTVVVFRHTRRGIPLWRLDQG*VQVDVM Trigger: CATAACATCTACCTGCACTCAGCCTTGGTCAAGTCT...CCATAATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCCTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR CCA 90 bp | GGACACTGTTGTTGTCTTCAGACACACCAGAAGAGGGATCCCATTATGGATGGTTATAAGAAGTGCTTGTaGGAGCTGTGGGTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GHCCCLQTHQKRDPIMDGYKKCL*ELWVRK Trigger: CTTCCTGACCCACAGCTCCCACAAGCACTTCTTATA...ACCATCCATAATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR GCA 90 bp | CTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACACCAGAAAGCTTCCAGCTTaGGCAAACCATAGTTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGIESPSSERVVASVLHTRKLPA*ANHSYP Trigger: TGGATAACTATGGTTTGCGCAAGCTGGAAGCTTTCT...GGTGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | GTGATAAGAATGGTGTCATTATTCCGAGGTAAAGCACTTGTCCAAACTGGAAACCAATGGCCAGCTCAATaGTCAGCCAGAGGAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: VIRMVSLFRGKALVQTGNQWPAQ*SARGGC Trigger: GCATCCTCCTCTGGCTGACCATTGAGCTGGCCATTG...GTTTCCAGTTTGGACAAGTGCTTTACCTCGGAATAATGACACCATTCTTATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | ATATATGTGAGGACACTGTTGTTGTCTTCAGACACACCAGAAGAGGGATCCCATCTCCTGCATGACAGCTaGCATGCTGGTGAAAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IYVRTLLLSSDTPEEGSHLLHDS*HAGESQ Trigger: TTGACTTTCACCAGCATGCCAGCTGTCATGCAGGAG...ATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCCTCACATATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR TCA 90 bp | GTTGTGGTGATAAGAATGGTGTCATTATTCCGAGGTAAAGCACTTGTCCAAACTTCACAAAGTACAGGTTaGTGGCGCAGACTAGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VVVIRMVSLFRGKALVQTSQSTG*WRRLAP Trigger: TGGCGCTAGTCTGCGCCATCAACCTGTACTTTGTGA...AGTTTGGACAAGTGCTTTACCTCGGAATAATGACACCATTCTTATCACCACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR GCA 90 bp | GTGATAAGAATGGTGTCATTATTCCGAGGTAAAGCACTTGTCCAAACTGGAAACGCCCAAGTAACCTATTaGGAACAGAGCCACAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VIRMVSLFRGKALVQTGNAQVTY*EQSHKA Trigger: GGCCTTGTGGCTCTGTTCGCAATAGGTTACTTGGGC...GTTTCCAGTTTGGACAAGTGCTTTACCTCGGAATAATGACACCATTCTTATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | GTGATAAGAATGGTGTCATTATTCCGAGGTAAAGCACTTGTCCAAACTGGAAACACACCGATAGGGCGATaGTGGCCTCAATCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VIRMVSLFRGKALVQTGNTPIGR*WPQSGS Trigger: ACTTCCTGATTGAGGCCACCATCGCCCTATCGGTGT...GTTTCCAGTTTGGACAAGTGCTTTACCTCGGAATAATGACACCATTCTTATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR GCA 90 bp | GTTGTGGTGATAAGAATGGTGTCATTATTCCGAGGTAAAGCACTTGTCCAAACTGTCCCGATGACTTCCTaGATATCTGAGCCCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: VVVIRMVSLFRGKALVQTVPMTS*ISEPTM Trigger: CATTGTGGGCTCAGATATGCAGGAAGTCATCGGGAC...AGTTTGGACAAGTGCTTTACCTCGGAATAATGACACCATTCTTATCACCACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CCA 90 bp | ATAAGAATGGTGTCATTATTCCGAGGTAAAGCACTTGTCCAAACTGGAAACCGGTCAGGAAGTACATGTTaGCTTCTCGAACATCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: IRMVSLFRGKALVQTGNRSGSTC*LLEHPP Trigger: GGGTGGATGTTCGAGAAGCCAACATGTACTTCCTGA...CCGGTTTCCAGTTTGGACAAGTGCTTTACCTCGGAATAATGACACCATTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR TCA 90 bp | ACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGTAGGGGACCTCCAATTTTGATAAATATCCACTaGCACAGTGTTATTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TCPNWKPVIQKASRGPPILINIH*HSVIVP Trigger: AGGGACAATAACACTGTGTCAGTGGATATTTATCAA...AATTGGAGGTCCCCTACTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR GCA 90 bp | GTTGTGGTGATAAGAATGGTGTCATTATTCCGAGGTAAAGCACTTGTCCAAACTGGCAGCAGTAGACTCTaGAGAACATTGAGTAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: VVVIRMVSLFRGKALVQTGSSRL*RTLSRS Trigger: CGATCTACTCAATGTTCTGCAGAGTCTACTGCTGCC...AGTTTGGACAAGTGCTTTACCTCGGAATAATGACACCATTCTTATCACCACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR TCA 90 bp | ATAAGAATGGTGTCATTATTCCGAGGTAAAGCACTTGTCCAAACTGGAAACCGGTTGATAAATATCCACTaGCACAGTGTTATTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IRMVSLFRGKALVQTGNRLINIH*HSVIVP Trigger: AGGGACAATAACACTGTGTCAGTGGATATTTATCAA...CCGGTTTCCAGTTTGGACAAGTGCTTTACCTCGGAATAATGACACCATTCTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| 3UTR CAA 72 bp | AGATTTATTTATTTTATATATGTGAGGACACTGTTGTaGTCTTCAGACACACCAGAAGAGGGATCCCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: RFIYFIYVRTLL*SSDTPEEGSHY Trigger: ATAATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCCTCACATATATAAAATAAATAAATCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS CCA 90 bp | CCCAAGTCCTTGCCTGTCACCACGCCCAGCCGGGCAGCCAGCCGCTaGCACAGCAAACCTAGCACAGTCGCCCAGAGCAGCACCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PKSLPVTTPSRAASR*HSKPSTVAQSSTQR Trigger: CCTCTGGGTGCTGCTCTGGGCGACTGTGCTAGGTTTGCTGTGCCAGCGGCTGGCTGCCCGGCTGGGCGTGGTGACAGGCAAGGACTTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS GCA 90 bp | GGGGCACCTTGGGGTAGTAGAGATGGCAGACTTCACCCAAGTCCTTaGCTGTCACCACGCCCAGCCGGGCAGCCAGCCGCTGGCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GAPWGSRDGRLHPSP*LSPRPAGQPAAGTA Trigger: TGCTGTGCCAGCGGCTGGCTGCCCGGCTGGGCGTGGTGACAGGCAAGGACTTGGGTGAAGTCTGCCATCTCTACTACCCCAAGGTGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS CCA 90 bp | CTTCTCACTCAGGTAGGTCTCCCGGCAAGGCGCTGGCTGAGGTGCTaGGCCAGGCAGGCTGGAAATGGAGCCATAACTGGGCCTGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLTQVGLPARRWLRC*ARQAGNGAITGPAQ Trigger: CTGAGCAGGCCCAGTTATGGCTCCATTTCCAGCCTGCCTGGCCCAGCACCTCAGCCAGCGCCTTGCCGGGAGACCTACCTGAGTGAGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS GCA 90 bp | CCCTGCACGCCTCCCTGCTCCTCGTTAGGGAGCCCATATAAGAAGTaGTTGTGGGAGCTGTGGGTCAGGAAGGTGGCTCCGTGGGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: PCTPPCSSLGSPYKK*LWELWVRKVAPWAM Trigger: CATCGCCCACGGAGCCACCTTCCTGACCCACAGCTCCCACAAGCACTTCTTATATGGGCTCCCTAACGAGGAGCAGGGAGGCGTGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS GCA 90 bp | CCCCGTGAACGCCCACAGCTTCCTCAGGCTGAATGTACCCTGGTCTaGGCTGGGAATGGGGATCTTCTCACTCAGGTAGGTCTCCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PRERPQLPQAECTLV*AGNGDLLTQVGLPA Trigger: TGCCGGGAGACCTACCTGAGTGAGAAGATCCCCATTCCCAGCGCAGACCAGGGTACATTCAGCCTGAGGAAGCTGTGGGCGTTCACGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS GCA 90 bp | GAACTGTCCTGCATAGGTGCCGGTCATAGTAGAACTCTGCCCCGCTaGCAGGAGACCTACTGCCCAGATGTAGAGGGCCGCAGGGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: ELSCIGAGHSRTLPR*QETYCPDVEGRRAK Trigger: TTTGGCCCTGCGGCCCTCTACATCTGGGCAGTAGGTCTCCTGGCAGCGGGGCAGAGTTCTACTATGACCGGCACCTATGCAGGACAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS GCA 90 bp | GCGGGACCACCGCAGCTTAAGGAAACCCTCCATCACGAACTGTCCTaGATAGGTGCCGGTCATAGTAGAACTCTGCCCCGCTGCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AGPPQLKETLHHELS*IGAGHSRTLPRCQE Trigger: CTCCTGGCAGCGGGGCAGAGTTCTACTATGACCGGCACCTATGCAGGACAGTTCGTGATGGAGGGTTTCCTTAAGCTGCGGTGGTCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS CCA 90 bp | TGCTCCTCGTTAGGGAGCCCATATAAGAAGTGCTTGTGGGAGCTGTaGGTCAGGAAGGTGGCTCCGTGGGCGATGCAACAGGTCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CSSLGSPYKKCLWEL*VRKVAPWAMQQVQA Trigger: GGCCTGGACCTGTTGCATCGCCCACGGAGCCACCTTCCTGACCCACAGCTCCCACAAGCACTTCTTATATGGGCTCCCTAACGAGGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS CCA 90 bp | ACGCCTCCCTGCTCCTCGTTAGGGAGCCCATATAAGAAGTGCTTGTaGGAGCTGTGGGTCAGGAAGGTGGCTCCGTGGGCGATGCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: TPPCSSLGSPYKKCL*ELWVRKVAPWAMQQ Trigger: CTGTTGCATCGCCCACGGAGCCACCTTCCTGACCCACAGCTCCCACAAGCACTTCTTATATGGGCTCCCTAACGAGGAGCAGGGAGGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS GCA 90 bp | AGTGCTTGTGGGAGCTGTGGGTCAGGAAGGTGGCTCCGTGGGCGATaGAACAGGTCCAGGCCAGATAAGCAGTCAGGCCCAAGTAACCTA | + |
|
Preference number: 5 (lower is better) Translates to: SACGSCGSGRWLRGR*NRSRPDKQSGPSNL Trigger: TAGGTTACTTGGGCCTGACTGCTTATCTGGCCTGGACCTGTTGCATCGCCCACGGAGCCACCTTCCTGACCCACAGCTCCCACAAGCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS GCA 90 bp | GCAACAGGTCCAGGCCAGATAAGCAGTCAGGCCCAAGTAACCTATTaGGAACAGAGCCACAAGGCCAAAGTAGGCAGGGTGCGGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ATGPGQISSQAQVTY*EQSHKAKVGRVREA Trigger: AGCCTCCCGCACCCTGCCTACTTTGGCCTTGTGGCTCTGTTCGCAATAGGTTACTTGGGCCTGACTGCTTATCTGGCCTGGACCTGTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS CCA 90 bp | GGAGCCCATATAAGAAGTGCTTGTGGGAGCTGTGGGTCAGGAAGGTaGCTCCGTGGGCGATGCAACAGGTCCAGGCCAGATAAGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GAHIRSACGSCGSGR*LRGRCNRSRPDKQS Trigger: TGACTGCTTATCTGGCCTGGACCTGTTGCATCGCCCACGGAGCCACCTTCCTGACCCACAGCTCCCACAAGCACTTCTTATATGGGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS GCA 90 bp | CCAGCGGAGAGCAGATTGAAGGAGATAGCCGTCCCGATGACTTCCTaGATATCTGAGCCCACAATGGCCAGCTCAATGGTCAGCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PAESRLKEIAVPMTS*ISEPTMASSMVSQR Trigger: CCTCTGGCTGACCATTGAGCTGGCCATTGTGGGCTCAGATATGCAGGAAGTCATCGGGACGGCTATCTCCTTCAATCTGCTCTCCGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS TCA 90 bp | GAGCAGATTGAAGGAGATAGCCGTCCCGATGACTTCCTGCATATCTaGGCCCACAATGGCCAGCTCAATGGTCAGCCAGAGGAGGATGCG | + |
|
Preference number: 5 (lower is better) Translates to: EQIEGDSRPDDFLHI*AHNGQLNGQPEEDA Trigger: CGCATCCTCCTCTGGCTGACCATTGAGCTGGCCATTGTGGGCTCAGATATGCAGGAAGTCATCGGGACGGCTATCTCCTTCAATCTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS GCA 90 bp | GGTGGGCAGCACCAGGCCCTTAAGGAGCGCTCCCTGGGAAGGGTGTaGTACCACATACTCATAGCCGAAGGTCAAAGCCATTATGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: GGQHQALKERSLGRV*YHILIAEGQSHYGN Trigger: ATTACCATAATGGCTTTGACCTTCGGCTATGAGTATGTGGTAGCACACCCTTCCCAGGGAGCGCTCCTTAAGGGCCTGGTGCTGCCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS CCA 90 bp | GATGGCTTTGCTCATCCGGCCGTTGGCAAACTCCTGCATGACAGCTaGCATGCTGGTGAAAGTCAAAATGGGCAGTACAGCGAAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DGFAHPAVGKLLHDS*HAGESQNGQYSEGQ Trigger: CTGCCCTTCGCTGTACTGCCCATTTTGACTTTCACCAGCATGCCAGCTGTCATGCAGGAGTTTGCCAACGGCCGGATGAGCAAAGCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS TCA 90 bp | ATCCACCCGGCGGGTTCTGTCTACTTCTCTAGACTTGACCAAGGCTaGGTGCAGGTAGATGTTATGGGGCATGATGATGGCACCGACGAT | + |
|
Preference number: 5 (lower is better) Translates to: IHPAGSVYFSRLDQG*VQVDVMGHDDGTDD Trigger: ATCGTCGGTGCCATCATCATGCCCCATAACATCTACCTGCACTCAGCCTTGGTCAAGTCTAGAGAAGTAGACAGAACCCGCCGGGTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CAA 90 bp | GGACACTGTTGTTGTCTTCAGACACACCAGAAGAGGGATCCCATTATGGATGGTACTTCACCCAAGTCCTaGCCTGTCACCACGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GHCCCLQTHQKRDPIMDGTSPKS*PVTTPS Trigger: GCTGGGCGTGGTGACAGGCAAGGACTTGGGTGAAGT...ACCATCCATAATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR CAA 90 bp | ACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGTAGGGGACCTCCAATTACTTCACCCAAGTCCTaGCCTGTCACCACGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TCPNWKPVIQKASRGPPITSPKS*PVTTPS Trigger: GCTGGGCGTGGTGACAGGCAAGGACTTGGGTGAAGT...AATTGGAGGTCCCCTACTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS GCA 90 bp | ATGCACGAAGTGATGGCTTTGCTCATCCGGCCGTTGGCAAACTCCTaGATGACAGCTGGCATGCTGGTGAAAGTCAAAATGGGCAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: MHEVMALLIRPLANS*MTAGMLVKVKMGST Trigger: TGTACTGCCCATTTTGACTTTCACCAGCATGCCAGCTGTCATGCAGGAGTTTGCCAACGGCCGGATGAGCAAAGCCATCACTTCGTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CAA 90 bp | TATTCCGAGGTAAAGCACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGAGCACCCAGAGGAGTTaGAACCCAGCCACAGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YSEVKHLSKLETGNPESQSTQRS*NPATAP Trigger: TGGCGCTGTGGCTGGGTTCAAACTCCTCTGGGTGCT...CTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGTGCTTTACCTCGGAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR CAA 90 bp | GGACACTGTTGTTGTCTTCAGACACACCAGAAGAGGGATCCCATTATGGATGGTTTGCTCATCCGGCCGTaGGCAAACTCCTGCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: GHCCCLQTHQKRDPIMDGLLIRP*ANSCMT Trigger: TGTCATGCAGGAGTTTGCCAACGGCCGGATGAGCAA...ACCATCCATAATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR CAA 90 bp | ACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGTAGGGGACCTCCAATTTTGCTCATCCGGCCGTaGGCAAACTCCTGCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: TCPNWKPVIQKASRGPPILLIRP*ANSCMT Trigger: TGTCATGCAGGAGTTTGCCAACGGCCGGATGAGCAA...AATTGGAGGTCCCCTACTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CAA 90 bp | CTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACACCATCACAAAGTACAGGTaGATGGCGCAGACTAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGIESPSSERVVASVLHTITKYR*MAQTSA Trigger: GGCGCTAGTCTGCGCCATCAACCTGTACTTTGTGAT...GGTGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CAA 90 bp | TGTGAGGACACTGTTGTTGTCTTCAGACACACCAGAAGAGGGATCCCATTATGGTTCTGGAGGCTGCTGTaGGCACAGATGTTGAACGCT | + |
|
Preference number: 5 (lower is better) Translates to: CEDTVVVFRHTRRGIPLWFWRLL*AQMLNA Trigger: AGCGTTCAACATCTGTGCCAACAGCAGCCTCCAGAA...CCATAATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCCTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR CAA 90 bp | ACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGTAGGGGACCTCCAATTATCACAAAGTACAGGTaGATGGCGCAGACTAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TCPNWKPVIQKASRGPPIITKYR*MAQTSA Trigger: GGCGCTAGTCTGCGCCATCAACCTGTACTTTGTGAT...AATTGGAGGTCCCCTACTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CAA 90 bp | TGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACACCTCCATATAAGAAGTGCTaGTGGGAGCTGTGGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WELNPHLLKGWWLVFFTPPYKKC*WELWVR Trigger: CCTGACCCACAGCTCCCACAAGCACTTCTTATATGG...AGGTGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CAA 90 bp | GCAGTTCTGTTTGAGGTGTTCTGGGAACTGGAGTCACCTTCAGTTGAAAGCCACATCAGGAAGTACATGTaGGCTTCTCGAACATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: AVLFEVFWELESPSVESHIRKYM*ASRTST Trigger: GGTGGATGTTCGAGAAGCCAACATGTACTTCCTGAT...GTGGCTTTCAACTGAAGGTGACTCCAGTTCCCAGAACACCTCAAACAGAACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
||
| CDS-3UTR CAA 90 bp | ATGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACGCCATGACGAAGAGGTaGATGATGAAGGACACCGAT | + |
|
Preference number: 5 (lower is better) Translates to: MLGIESPSSERVVASVLHAMTKR*MMKDTD Trigger: ATCGGTGTCCTTCATCATCAACCTCTTCGTCATGGC...GTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CAA 90 bp | ACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGTAGGGGACCTCCAATTGCCATGACGAAGAGGTaGATGATGAAGGACACCGAT | + |
|
Preference number: 5 (lower is better) Translates to: TCPNWKPVIQKASRGPPIAMTKR*MMKDTD Trigger: ATCGGTGTCCTTCATCATCAACCTCTTCGTCATGGC...AATTGGAGGTCCCCTACTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CAA 90 bp | TATTCCGAGGTAAAGCACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGTTCTGGAGGCTGCTGTaGGCACAGATGTTGAACGCT | + |
|
Preference number: 5 (lower is better) Translates to: YSEVKHLSKLETGNPESQFWRLL*AQMLNA Trigger: AGCGTTCAACATCTGTGCCAACAGCAGCCTCCAGAA...CTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGTGCTTTACCTCGGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CAA 90 bp | TATTCCGAGGTAAAGCACTTGTCCAAACTGGAAACCGGTAATCCAGAAAGCCAGCCATATAAGAAGTGCTaGTGGGAGCTGTGGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YSEVKHLSKLETGNPESQPYKKC*WELWVR Trigger: CCTGACCCACAGCTCCCACAAGCACTTCTTATATGG...CTGGCTTTCTGGATTACCGGTTTCCAGTTTGGACAAGTGCTTTACCTCGGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CAA 90 bp | ATGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACATCAGGAAGTACATGTaGGCTTCTCGAACATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: MLGIESPSSERVVASVLHIRKYM*ASRTST Trigger: GGTGGATGTTCGAGAAGCCAACATGTACTTCCTGAT...GTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
||
| CDS-3UTR CAA 90 bp | TGTGAGGACACTGTTGTTGTCTTCAGACACACCAGAAGAGGGATCCCATTATGGACTGACACAGTGTTATaGTCCCTGGGGAAGATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CEDTVVVFRHTRRGIPLWTDTVL*SLGKIL Trigger: TAAGATCTTCCCCAGGGACAATAACACTGTGTCAGT...CCATAATGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCCTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| CDS-3UTR CAA 90 bp | TGCTGGGAATTGAATCCCCATCTTCTGAAAGGGTGGTGGCTAGTGTTCTTCACAACTGACACAGTGTTATaGTCCCTGGGGAAGATCTTA | + |
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Preference number: 5 (lower is better) Translates to: CWELNPHLLKGWWLVFFTTDTVL*SLGKIL Trigger: TAAGATCTTCCCCAGGGACAATAACACTGTGTCAGT...TGTGAAGAACACTAGCCACCACCCTTTCAGAAGATGGGGATTCAATTCCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CCA 72 bp | TTGCCTGTCACCACGCCCAGCCGGGCAGCCAGCCGCTaGCACAGCAAACCTAGCACAGTCGCCCAGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LPVTTPSRAASR*HSKPSTVAQSS Trigger: GCTGCTCTGGGCGACTGTGCTAGGTTTGCTGTGCCAGCGGCTGGCTGCCCGGCTGGGCGTGGTGACAGGCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS TCA 72 bp | CCACCAACACAGTGGGCAGGATGGCGCAAGAGCGCGTaGGAAGGACCCGAGCGAAGCGGGACCACCGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PPTQWAGWRKSA*EGPERSGTTAA Trigger: AGCTGCGGTGGTCCCGCTTCGCTCGGGTCCTTCTCACGCGCTCTTGCGCCATCCTGCCCACTGTGTTGGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CCA 72 bp | GGCAAGGCGCTGGCTGAGGTGCTGGGCCAGGCAGGCTaGAAATGGAGCCATAACTGGGCCTGCTCAGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: GKALAEVLGQAG*KWSHNWACSAS Trigger: CGAGGCTGAGCAGGCCCAGTTATGGCTCCATTTCCAGCCTGCCTGGCCCAGCACCTCAGCCAGCGCCTTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS GCA 72 bp | TGGGGTAGTAGAGATGGCAGACTTCACCCAAGTCCTTaGCTGTCACCACGCCCAGCCGGGCAGCCAGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: WGSRDGRLHPSP*LSPRPAGQPAA Trigger: AGCGGCTGGCTGCCCGGCTGGGCGTGGTGACAGGCAAGGACTTGGGTGAAGTCTGCCATCTCTACTACCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS GCA 72 bp | TGCATAGGTGCCGGTCATAGTAGAACTCTGCCCCGCTaGCAGGAGACCTACTGCCCAGATGTAGAGGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: CIGAGHSRTLPR*QETYCPDVEGR Trigger: GCGGCCCTCTACATCTGGGCAGTAGGTCTCCTGGCAGCGGGGCAGAGTTCTACTATGACCGGCACCTATGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CCA 72 bp | AGAGCAGCACCCAGAGGAGCTGGTCTGCGCTGGGAATaGGGATCTTCTCACTCAGGTAGGTCTCCCGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: RAAPRGAGLRWE*GSSHSGRSPGK Trigger: CTTGCCGGGAGACCTACCTGAGTGAGAAGATCCCCATTCCCAGCGCAGACCAGCTCCTCTGGGTGCTGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187516.7 |
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| CDS CAA 90 bp | TGCACGCCTCCCTGCTCCTCGTTAGGGAGCCCATATAAGAAGTGCTaGTGGGAGCTGTGGGTCAGGAAGGTGGCTCCGTGGGCGATGCAA | + |
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Preference number: 6 (lower is better) Translates to: CTPPCSSLGSPYKKC*WELWVRKVAPWAMQ Trigger: TTGCATCGCCCACGGAGCCACCTTCCTGACCCACAGCTCCCACAAGCACTTCTTATATGGGCTCCCTAACGAGGAGCAGGGAGGCGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS GCA 72 bp | CATAGTAGAACTCTGCCCCGCTGCCAGGAGACCTACTaGCCAGATGTAGAGGGCCGCAGGGCCAAAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: HSRTLPRCQETY*PDVEGRRAKET Trigger: TGTCTCTTTGGCCCTGCGGCCCTCTACATCTGGGCAGTAGGTCTCCTGGCAGCGGGGCAGAGTTCTACTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS GCA 72 bp | CCTCCCTGCTCCTCGTTAGGGAGCCCATATAAGAAGTaGTTGTGGGAGCTGTGGGTCAGGAAGGTGGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: PPCSSLGSPYKK*LWELWVRKVAP Trigger: CGGAGCCACCTTCCTGACCCACAGCTCCCACAAGCACTTCTTATATGGGCTCCCTAACGAGGAGCAGGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CAA 72 bp | CCGTCCCACAGCGGGATGCGTCCAGCGGAGAGCAGATaGAAGGAGATAGCCGTCCCGATGACTTCCTGCATA | + |
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Preference number: 6 (lower is better) Translates to: PSHSGMRPAESR*KEIAVPMTSCI Trigger: TATGCAGGAAGTCATCGGGACGGCTATCTCCTTCAATCTGCTCTCCGCTGGACGCATCCCGCTGTGGGACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CAA 90 bp | ATCAGTACACCGTCCCACAGCGGGATGCGTCCAGCGGAGAGCAGATaGAAGGAGATAGCCGTCCCGATGACTTCCTGCATATCTGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: ISTPSHSGMRPAESR*KEIAVPMTSCISEP Trigger: GGGCTCAGATATGCAGGAAGTCATCGGGACGGCTATCTCCTTCAATCTGCTCTCCGCTGGACGCATCCCGCTGTGGGACGGTGTACTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS GCA 72 bp | CGCCCACAGCTTCCTCAGGCTGAATGTACCCTGGTCTaGGCTGGGAATGGGGATCTTCTCACTCAGGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: RPQLPQAECTLV*AGNGDLLTQVG Trigger: ACCTACCTGAGTGAGAAGATCCCCATTCCCAGCGCAGACCAGGGTACATTCAGCCTGAGGAAGCTGTGGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| CDS CCA 72 bp | GTGAACGCCCACAGCTTCCTCAGGCTGAATGTACCCTaGTCTGCGCTGGGAATGGGGATCTTCTCACTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VNAHSFLRLNVP*SALGMGIFSLR Trigger: CCTGAGTGAGAAGATCCCCATTCCCAGCGCAGACCAGGGTACATTCAGCCTGAGGAAGCTGTGGGCGTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| CDS CCA 72 bp | ATAAGAAGTGCTTGTGGGAGCTGTGGGTCAGGAAGGTaGCTCCGTGGGCGATGCAACAGGTCCAGGCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: IRSACGSCGSGR*LRGRCNRSRPD Trigger: ATCTGGCCTGGACCTGTTGCATCGCCCACGGAGCCACCTTCCTGACCCACAGCTCCCACAAGCACTTCTTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS GCA 72 bp | CCGCAGCTTAAGGAAACCCTCCATCACGAACTGTCCTaGATAGGTGCCGGTCATAGTAGAACTCTGCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: PQLKETLHHELS*IGAGHSRTLPR Trigger: GCGGGGCAGAGTTCTACTATGACCGGCACCTATGCAGGACAGTTCGTGATGGAGGGTTTCCTTAAGCTGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CCA 72 bp | TTAGGGAGCCCATATAAGAAGTGCTTGTGGGAGCTGTaGGTCAGGAAGGTGGCTCCGTGGGCGATGCAACAG | + |
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Preference number: 6 (lower is better) Translates to: LGSPYKKCLWEL*VRKVAPWAMQQ Trigger: CTGTTGCATCGCCCACGGAGCCACCTTCCTGACCCACAGCTCCCACAAGCACTTCTTATATGGGCTCCCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CAA 72 bp | GCGCAGACTAGCGCCATGATGCACGAAGTGATGGCTTaGCTCATCCGGCCGTTGGCAAACTCCTGCATGACA | + |
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Preference number: 6 (lower is better) Translates to: AQTSAMMHEVMA*LIRPLANSCMT Trigger: TGTCATGCAGGAGTTTGCCAACGGCCGGATGAGCAAAGCCATCACTTCGTGCATCATGGCGCTAGTCTGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS TCA 72 bp | ACCCAGAGGAGTTTGAACCCAGCCACAGCGCCAGCTTaGAGGTCGGACTCAATGTTTCCCGGGTCAAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: TQRSLNPATAPA*RSDSMFPGSRK Trigger: TTTCCTTGACCCGGGAAACATTGAGTCCGACCTTCAAGCTGGCGCTGTGGCTGGGTTCAAACTCCTCTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027368.6 |
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| CDS GCA 72 bp | CCAGGCCAGATAAGCAGTCAGGCCCAAGTAACCTATTaGGAACAGAGCCACAAGGCCAAAGTAGGCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PGQISSQAQVTY*EQSHKAKVGRV Trigger: CACCCTGCCTACTTTGGCCTTGTGGCTCTGTTCGCAATAGGTTACTTGGGCCTGACTGCTTATCTGGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CCA 72 bp | GCTCATCCGGCCGTTGGCAAACTCCTGCATGACAGCTaGCATGCTGGTGAAAGTCAAAATGGGCAGTACAGC | + |
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Preference number: 6 (lower is better) Translates to: AHPAVGKLLHDS*HAGESQNGQYS Trigger: GCTGTACTGCCCATTTTGACTTTCACCAGCATGCCAGCTGTCATGCAGGAGTTTGCCAACGGCCGGATGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CAA 72 bp | GATAGGGCGATGGTGGCCTCAATCAGGAAGTACATGTaGGCTTCTCGAACATCCACCCGGCGGGTTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: DRAMVASIRKYM*ASRTSTRRVLS Trigger: AGACAGAACCCGCCGGGTGGATGTTCGAGAAGCCAACATGTACTTCCTGATTGAGGCCACCATCGCCCTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CAA 72 bp | ATGATGCACGAAGTGATGGCTTTGCTCATCCGGCCGTaGGCAAACTCCTGCATGACAGCTGGCATGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: MMHEVMALLIRP*ANSCMTAGMLV Trigger: CACCAGCATGCCAGCTGTCATGCAGGAGTTTGCCAACGGCCGGATGAGCAAAGCCATCACTTCGTGCATCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CCA 72 bp | ATAGGGCGATGGTGGCCTCAATCAGGAAGTACATGTTaGCTTCTCGAACATCCACCCGGCGGGTTCTGTCTA | + |
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Preference number: 6 (lower is better) Translates to: IGRWWPQSGSTC*LLEHPPGGFCL Trigger: TAGACAGAACCCGCCGGGTGGATGTTCGAGAAGCCAACATGTACTTCCTGATTGAGGCCACCATCGCCCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CAA 72 bp | AGTACAGCGAAGGGCAGCAGTAGACTCTGCAGAACATaGAGTAGATCGTTGAGGCCGGACAGGTCCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: STAKGSSRLCRT*SRSLRPDRSFR Trigger: CCTGAAGGACCTGTCCGGCCTCAACGATCTACTCAATGTTCTGCAGAGTCTACTGCTGCCCTTCGCTGTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CAA 72 bp | TCCAGGCCAGATAAGCAGTCAGGCCCAAGTAACCTATaGCGAACAGAGCCACAAGGCCAAAGTAGGCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: SRPDKQSGPSNL*RTEPQGQSRQG Trigger: ACCCTGCCTACTTTGGCCTTGTGGCTCTGTTCGCAATAGGTTACTTGGGCCTGACTGCTTATCTGGCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CAA 90 bp | AAGGACACCGATAGGGCGATGGTGGCCTCAATCAGGAAGTACATGTaGGCTTCTCGAACATCCACCCGGCGGGTTCTGTCTACTTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: KDTDRAMVASIRKYM*ASRTSTRRVLSTSL Trigger: TAGAGAAGTAGACAGAACCCGCCGGGTGGATGTTCGAGAAGCCAACATGTACTTCCTGATTGAGGCCACCATCGCCCTATCGGTGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CAA 90 bp | AAAATGGGCAGTACAGCGAAGGGCAGCAGTAGACTCTGCAGAACATaGAGTAGATCGTTGAGGCCGGACAGGTCCTTCAGGTCTCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: KMGSTAKGSSRLCRT*SRSLRPDRSFRSRK Trigger: CTTCCGAGACCTGAAGGACCTGTCCGGCCTCAACGATCTACTCAATGTTCTGCAGAGTCTACTGCTGCCCTTCGCTGTACTGCCCATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CAA 90 bp | ACTAGCGCCATGATGCACGAAGTGATGGCTTTGCTCATCCGGCCGTaGGCAAACTCCTGCATGACAGCTGGCATGCTGGTGAAAGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: TSAMMHEVMALLIRP*ANSCMTAGMLVKVK Trigger: TTTGACTTTCACCAGCATGCCAGCTGTCATGCAGGAGTTTGCCAACGGCCGGATGAGCAAAGCCATCACTTCGTGCATCATGGCGCTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS GCA 72 bp | AGCAGATTGAAGGAGATAGCCGTCCCGATGACTTCCTaGATATCTGAGCCCACAATGGCCAGCTCAATGGTC | + |
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Preference number: 6 (lower is better) Translates to: SRLKEIAVPMTS*ISEPTMASSMV Trigger: GACCATTGAGCTGGCCATTGTGGGCTCAGATATGCAGGAAGTCATCGGGACGGCTATCTCCTTCAATCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS GCA 72 bp | AAAATGGGCAGTACAGCGAAGGGCAGCAGTAGACTCTaGAGAACATTGAGTAGATCGTTGAGGCCGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: KMGSTAKGSSRL*RTLSRSLRPDR Trigger: CCTGTCCGGCCTCAACGATCTACTCAATGTTCTGCAGAGTCTACTGCTGCCCTTCGCTGTACTGCCCATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS GCA 72 bp | GTGATGGCTTTGCTCATCCGGCCGTTGGCAAACTCCTaGATGACAGCTGGCATGCTGGTGAAAGTCAAAATG | + |
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Preference number: 6 (lower is better) Translates to: VMALLIRPLANS*MTAGMLVKVKM Trigger: CATTTTGACTTTCACCAGCATGCCAGCTGTCATGCAGGAGTTTGCCAACGGCCGGATGAGCAAAGCCATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS TCA 72 bp | GCGGGTTCTGTCTACTTCTCTAGACTTGACCAAGGCTaGGTGCAGGTAGATGTTATGGGGCATGATGATGGC | + |
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Preference number: 6 (lower is better) Translates to: AGSVYFSRLDQG*VQVDVMGHDDG Trigger: GCCATCATCATGCCCCATAACATCTACCTGCACTCAGCCTTGGTCAAGTCTAGAGAAGTAGACAGAACCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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| CDS CAA 72 bp | GCTGTTGGCACAGATGTTGAACGCTTCCTCATTGGTTaGCTGGTAGAAGGCCTGACCAAAAACAGCCATGAC | + |
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Preference number: 6 (lower is better) Translates to: AVGTDVERFLIG*LVEGLTKNSHD Trigger: GTCATGGCTGTTTTTGGTCAGGCCTTCTACCAGCAAACCAATGAGGAAGCGTTCAACATCTGTGCCAACAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027368.6 ENSMUST00000187516.7 |
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