Pregenerated sensors for SLC10A6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029321Ensembl transcript IDs: ENSMUST00000031263.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGGGAGACACCTCTGCTTTCTGCCAACCATACATGGTCTTCACTaGCCACGGAGGAGGATGGAGGGCCAAGCTGGTCCGTGCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: VGRHLCFLPTIHGLH*PRRRMEGQAGPCLP Trigger: TGGGAGGCACGGACCAGCTTGGCCCTCCATCCTCCTCCGTGGCCAGTGAAGACCATGTATGGTTGGCAGAAAGCAGAGGTGTCTCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR CCA 90 bp | GGACAGCTTTGTGGGGAGACACCTCTGCTTTCTGCCAACCATACATaGTCTTCACTGGCCACGGAGGAGGATGGAGGGCCAAGCTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: GQLCGETPLLSANHT*SSLATEEDGGPSWS Trigger: GGACCAGCTTGGCCCTCCATCCTCCTCCGTGGCCAGTGAAGACCATGTATGGTTGGCAGAAAGCAGAGGTGTCTCCCCACAAAGCTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR GCA 90 bp | TCTGAGACTGAACAATCTGTCCGGGATTCTGAGGAGCTGTGGGCCTaGCCACTGCAGCTGCAGGAAAGAACCTACGGGGACATGGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: SETEQSVRDSEELWA*PLQLQERTYGDMGS Trigger: TGACCCCATGTCCCCGTAGGTTCTTTCCTGCAGCTGCAGTGGGCAGGCCCACAGCTCCTCAGAATCCCGGACAGATTGTTCAGTCTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR GCA 90 bp | TTCCACAATGGGAGGACAGCTTTGTGGGGAGACACCTCTGCTTTCTaGCAACCATACATGGTCTTCACTGGCCACGGAGGAGGATGGAGG | + |
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Preference number: 1 (lower is better) Translates to: FHNGRTALWGDTSAF*QPYMVFTGHGGGWR Trigger: CCTCCATCCTCCTCCGTGGCCAGTGAAGACCATGTATGGTTGGCAGAAAGCAGAGGTGTCTCCCCACAAAGCTGTCCTCCCATTGTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR GCA 90 bp | GATTACATTCCACAATGGGAGGACAGCTTTGTGGGGAGACACCTCTaGTTTCTGCCAACCATACATGGTCTTCACTGGCCACGGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: DYIPQWEDSFVGRHL*FLPTIHGLHWPRRR Trigger: CCTCCTCCGTGGCCAGTGAAGACCATGTATGGTTGGCAGAAAGCAGAGGTGTCTCCCCACAAAGCTGTCCTCCCATTGTGGAATGTAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR CCA 90 bp | TCCTGCAGTGTGAGTGATGTCTCCTCTGCATGGCATTCTCCCTCTTaGATTACATTCCACAATGGGAGGACAGCTTTGTGGGGAGACACC | + |
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Preference number: 1 (lower is better) Translates to: SCSVSDVSSAWHSPS*ITFHNGRTALWGDT Trigger: GGTGTCTCCCCACAAAGCTGTCCTCCCATTGTGGAATGTAATCCAAGAGGGAGAATGCCATGCAGAGGAGACATCACTCACACTGCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR TCA 90 bp | CAGAGCACCTGCCTGAAGTCAAGAAGCTCTGTCCTGCAGTGTGAGTaGTGTCTCCTCTGCATGGCATTCTCCCTCTTGGATTACATTCCA | + |
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Preference number: 1 (lower is better) Translates to: QSTCLKSRSSVLQCE*CLLCMAFSLLDYIP Trigger: TGGAATGTAATCCAAGAGGGAGAATGCCATGCAGAGGAGACATCACTCACACTGCAGGACAGAGCTTCTTGACTTCAGGCAGGTGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR CCA 90 bp | CATTCTCCCTCTTGGATTACATTCCACAATGGGAGGACAGCTTTGTaGGGAGACACCTCTGCTTTCTGCCAACCATACATGGTCTTCACT | + |
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Preference number: 1 (lower is better) Translates to: HSPSWITFHNGRTAL*GDTSAFCQPYMVFT Trigger: AGTGAAGACCATGTATGGTTGGCAGAAAGCAGAGGTGTCTCCCCACAAAGCTGTCCTCCCATTGTGGAATGTAATCCAAGAGGGAGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR-3UTR GCA 90 bp | GGCGGGAGTGAACAGCAAAGCCCTTCTGAGACTGAACAATCTGTCCGGGATTCTCCTGCCCACTGCAGCTaGAGGAAAGAACCTACGGGG | + |
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Preference number: 2 (lower is better) Translates to: GGSEQQSPSETEQSVRDSPAHCS*RKEPTG Trigger: CCCCGTAGGTTCTTTCCTGCAGCTGCAGTGGGCAGG...AGAATCCCGGACAGATTGTTCAGTCTCAGAAGGGCTTTGCTGTTCACTCCCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGCGGGAGTGAACAGCAAAGCCCTTCTGAGACTGAACAATCTGTCCGGGATTTGTGGGCCTGCCCACTaGAGCTGCAGGAAAGAACCT | + |
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Preference number: 2 (lower is better) Translates to: LAGVNSKALLRLNNLSGICGPAH*SCRKEP Trigger: AGGTTCTTTCCTGCAGCTGCAGTGGGCAGGCCCACA...AATCCCGGACAGATTGTTCAGTCTCAGAAGGGCTTTGCTGTTCACTCCCGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCGGGAGTGAACAGCAAAGCCCTTCTGAGACTGAACAATCTGTCCGGGATTTCCAGAGCACCTGCCTaGAGTCAAGAAGCTCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: LAGVNSKALLRLNNLSGISRAPA*SQEALS Trigger: GGACAGAGCTTCTTGACTTCAGGCAGGTGCTCTGGA...AATCCCGGACAGATTGTTCAGTCTCAGAAGGGCTTTGCTGTTCACTCCCGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR-3UTR CCA 90 bp | CGTATGTCTCTGGTGTTTTGGAGATTGGGGCGATCCTGTATATCTACAGTTAGGGGCCACGGAGGAGGATaGAGGGCCAAGCTGGTCCGT | + |
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Preference number: 2 (lower is better) Translates to: RMSLVFWRLGRSCISTVRGHGGG*RAKLVR Trigger: ACGGACCAGCTTGGCCCTCCATCCTCCTCCGTGGCC...CCTAACTGTAGATATACAGGATCGCCCCAATCTCCAAAACACCAGAGACATACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR-3UTR GCA 90 bp | GGCGGGAGTGAACAGCAAAGCCCTTCTGAGACTGAACAATCTGTCCGGGATTCTCAAGAAGCTCTGTCCTaGAGTGTGAGTGATGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GGSEQQSPSETEQSVRDSQEALS*SVSDVS Trigger: GGAGACATCACTCACACTGCAGGACAGAGCTTCTTG...AGAATCCCGGACAGATTGTTCAGTCTCAGAAGGGCTTTGCTGTTCACTCCCGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR CAA 90 bp | TGGCATTCTCCCTCTTGGATTACATTCCACAATGGGAGGACAGCTTaGTGGGGAGACACCTCTGCTTTCTGCCAACCATACATGGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: WHSPSWITFHNGRTA*WGDTSAFCQPYMVF Trigger: GAAGACCATGTATGGTTGGCAGAAAGCAGAGGTGTCTCCCCACAAAGCTGTCCTCCCATTGTGGAATGTAATCCAAGAGGGAGAATGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCTCTAGTTCTCCAGAGCACCTGCCTGAAGTCAAGAAGCTCTGTCCTGCAGATTACATTCCACAATaGGAGGACAGCTTTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LFSSSPEHLPEVKKLCPADYIPQ*EDSFVG Trigger: CCCCACAAAGCTGTCCTCCCATTGTGGAATGTAATC...TGCAGGACAGAGCTTCTTGACTTCAGGCAGGTGCTCTGGAGAACTAGAGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTCTGGTGTTTTGGAGATTGGGGCGATCCTGTATATCTACAGTTAGGAGATCTCTGTCCTGCAGTGTaGGTGATGTCTCCTCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: CLWCFGDWGDPVYLQLGDLCPAV*VMSPLH Trigger: ATGCAGAGGAGACATCACTCACACTGCAGGACAGAG...ATCTCCTAACTGTAGATATACAGGATCGCCCCAATCTCCAAAACACCAGAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCGGGAGTGAACAGCAAAGCCCTTCTGAGACTGAACAATCTGTCCGGGATTATCACTGATCAGCTATaGAAACAAACAGGAAACAAG | + |
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Preference number: 2 (lower is better) Translates to: LAGVNSKALLRLNNLSGIITDQL*KQTGNK Trigger: CTTGTTTCCTGTTTGTTTTCATAGCTGATCAGTGAT...AATCCCGGACAGATTGTTCAGTCTCAGAAGGGCTTTGCTGTTCACTCCCGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTTTGGAGATTGGGGCGATCCTGTATATCTACAGTTAGGAGATTCAAGGCACTGGCATTCTCCCTCTTaGATTACATTCCACAATGGG | + |
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Preference number: 2 (lower is better) Translates to: CFGDWGDPVYLQLGDSRHWHSPS*ITFHNG Trigger: CCCATTGTGGAATGTAATCCAAGAGGGAGAATGCCA...GTGCCTTGAATCTCCTAACTGTAGATATACAGGATCGCCCCAATCTCCAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR CAA 90 bp | GCTATGAAAACAAACAGGAAACAAGCCACAGGCTTTTCTGGTGATTaGGTGCTCAGAATACTTGAATGGATGAACGTATGTCTCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: AMKTNRKQATGFSGD*VLRILEWMNVCLWC Trigger: ACACCAGAGACATACGTTCATCCATTCAAGTATTCTGAGCACCAAATCACCAGAAAAGCCTGTGGCTTGTTTCCTGTTTGTTTTCATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR CAA 90 bp | TATAAAGATGCCTTCAATAAATTACAGTCCTACATTACACAACATTaGGAAGCAGCCACTGTTCTAAGGAATGAGGTAGGTAACACAGGT | + |
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Preference number: 2 (lower is better) Translates to: YKDAFNKLQSYITQH*EAATVLRNEVGNTG Trigger: ACCTGTGTTACCTACCTCATTCCTTAGAACAGTGGCTGCTTCCAAATGTTGTGTAATGTAGGACTGTAATTTATTGAAGGCATCTTTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR CCA 72 bp | GCCCACTGCAGCTGCAGGAAAGAACCTACGGGGACATaGGGTCAGGGCCAGGGGTTCGCAGCAGCCCTGCGC | + |
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Preference number: 3 (lower is better) Translates to: AHCSCRKEPTGT*GQGQGFAAALR Trigger: GCGCAGGGCTGCTGCGAACCCCTGGCCCTGACCCCATGTCCCCGTAGGTTCTTTCCTGCAGCTGCAGTGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR GCA 72 bp | GGGATTCTGAGGAGCTGTGGGCCTGCCCACTGCAGCTaGAGGAAAGAACCTACGGGGACATGGGGTCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: GILRSCGPAHCS*RKEPTGTWGQG Trigger: GCCCTGACCCCATGTCCCCGTAGGTTCTTTCCTGCAGCTGCAGTGGGCAGGCCCACAGCTCCTCAGAATCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR CCA 72 bp | CACCTCTGCTTTCTGCCAACCATACATGGTCTTCACTaGCCACGGAGGAGGATGGAGGGCCAAGCTGGTCCG | + |
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Preference number: 3 (lower is better) Translates to: HLCFLPTIHGLH*PRRRMEGQAGP Trigger: CGGACCAGCTTGGCCCTCCATCCTCCTCCGTGGCCAGTGAAGACCATGTATGGTTGGCAGAAAGCAGAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR TCA 72 bp | TGCCTGAAGTCAAGAAGCTCTGTCCTGCAGTGTGAGTaGTGTCTCCTCTGCATGGCATTCTCCCTCTTGGAT | + |
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Preference number: 3 (lower is better) Translates to: CLKSRSSVLQCE*CLLCMAFSLLD Trigger: ATCCAAGAGGGAGAATGCCATGCAGAGGAGACATCACTCACACTGCAGGACAGAGCTTCTTGACTTCAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR CCA 72 bp | GCTCTGTCCTGCAGTGTGAGTGATGTCTCCTCTGCATaGCATTCTCCCTCTTGGATTACATTCCACAATGGG | + |
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Preference number: 3 (lower is better) Translates to: ALSCSVSDVSSA*HSPSWITFHNG Trigger: CCCATTGTGGAATGTAATCCAAGAGGGAGAATGCCATGCAGAGGAGACATCACTCACACTGCAGGACAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR GCA 72 bp | TCTCTTAGTGTCTCTTCTCTAGTTCTCCAGAGCACCTaGCTGAAGTCAAGAAGCTCTGTCCTGCAGTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: SLSVSSLVLQST*LKSRSSVLQCE Trigger: CTCACACTGCAGGACAGAGCTTCTTGACTTCAGGCAGGTGCTCTGGAGAACTAGAGAAGAGACACTAAGAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR CCA 72 bp | TGCATGGCATTCTCCCTCTTGGATTACATTCCACAATaGGAGGACAGCTTTGTGGGGAGACACCTCTGCTTT | + |
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Preference number: 3 (lower is better) Translates to: CMAFSLLDYIPQ*EDSFVGRHLCF Trigger: AAAGCAGAGGTGTCTCCCCACAAAGCTGTCCTCCCATTGTGGAATGTAATCCAAGAGGGAGAATGCCATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR CCA 72 bp | GTGAGTGATGTCTCCTCTGCATGGCATTCTCCCTCTTaGATTACATTCCACAATGGGAGGACAGCTTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: VSDVSSAWHSPS*ITFHNGRTALW Trigger: CCACAAAGCTGTCCTCCCATTGTGGAATGTAATCCAAGAGGGAGAATGCCATGCAGAGGAGACATCACTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR CCA 72 bp | TCTTGGATTACATTCCACAATGGGAGGACAGCTTTGTaGGGAGACACCTCTGCTTTCTGCCAACCATACATG | + |
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Preference number: 3 (lower is better) Translates to: SWITFHNGRTAL*GDTSAFCQPYM Trigger: CATGTATGGTTGGCAGAAAGCAGAGGTGTCTCCCCACAAAGCTGTCCTCCCATTGTGGAATGTAATCCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR TCA 72 bp | TTTCTGGTGATTTGGTGCTCAGAATACTTGAATGGATaGACGTATGTCTCTGGTGTTTTGGAGATTGGGGCG | + |
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Preference number: 3 (lower is better) Translates to: FLVIWCSEYLNG*TYVSGVLEIGA Trigger: CGCCCCAATCTCCAAAACACCAGAGACATACGTTCATCCATTCAAGTATTCTGAGCACCAAATCACCAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR CCA 72 bp | GAATGGATGAACGTATGTCTCTGGTGTTTTGGAGATTaGGGCGATCCTGTATATCTACAGTTAGGAGATTCA | + |
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Preference number: 3 (lower is better) Translates to: EWMNVCLWCFGD*GDPVYLQLGDS Trigger: TGAATCTCCTAACTGTAGATATACAGGATCGCCCCAATCTCCAAAACACCAGAGACATACGTTCATCCATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| 3UTR CCA 72 bp | GTGCTCAGAATACTTGAATGGATGAACGTATGTCTCTaGTGTTTTGGAGATTGGGGCGATCCTGTATATCTA | + |
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Preference number: 3 (lower is better) Translates to: VLRILEWMNVCL*CFGDWGDPVYL Trigger: TAGATATACAGGATCGCCCCAATCTCCAAAACACCAGAGACATACGTTCATCCATTCAAGTATTCTGAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS-3UTR GCA 90 bp | TGGTCTTCACTGGCCACGGAGGAGGATGGAGGGCCAAGCTGGTCCGTGCCTCCCGCTGCAGCATGGCGATaGACAGCTGGATGTTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: WSSLATEEDGGPSWSVPPAAAWR*TAGCSE Trigger: CTCAGAACATCCAGCTGTGCATCGCCATGCTGCAGC...GGGAGGCACGGACCAGCTTGGCCCTCCATCCTCCTCCGTGGCCAGTGAAGACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS-3UTR CCA 90 bp | GCGGGAGTGAACAGCAAAGCCCTTCTGAGACTGAACAATCTGTCCGGGATTCTGCCTGTGGTGCTGCTCTaGCTGCACTGGCCCCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: AGVNSKALLRLNNLSGILPVVLL*LHWPQS Trigger: ACTCTGGGGCCAGTGCAGCCAGAGCAGCACCACAGG...CAGAATCCCGGACAGATTGTTCAGTCTCAGAAGGGCTTTGCTGTTCACTCCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS-3UTR CCA 90 bp | TGGTCTTCACTGGCCACGGAGGAGGATGGAGGGCCAAGCTGGTCCGTGCCTCCCAGCAATAGCTTGGAATaGTTTCAGACCGAAGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: WSSLATEEDGGPSWSVPPSNSLE*FQTEAN Trigger: ATTGGCTTCGGTCTGAAACCATTCCAAGCTATTGCT...GGGAGGCACGGACCAGCTTGGCCCTCCATCCTCCTCCGTGGCCAGTGAAGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS-3UTR TCA 90 bp | TCCACAATGGGAGGACAGCTTTGTGGGGAGACACCTCTGCTTTCTGCCAACCATGCCAAGATTGGTGGGTaGGGAATGCCAGCAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: STMGGQLCGETPLLSANHAKIGG*GMPAGS Trigger: GCTTCCTGCTGGCATTCCTCACCCACCAATCTTGGC...ATGGTTGGCAGAAAGCAGAGGTGTCTCCCCACAAAGCTGTCCTCCCATTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS-3UTR GCA 90 bp | GCGGGAGTGAACAGCAAAGCCCTTCTGAGACTGAACAATCTGTCCGGGATTCTGGCAGAGAAGGACAGCTaGAGCATGGCGATGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: AGVNSKALLRLNNLSGILAEKDS*SMAMHS Trigger: GCTGTGCATCGCCATGCTGCAGCTGTCCTTCTCTGC...CAGAATCCCGGACAGATTGTTCAGTCTCAGAAGGGCTTTGCTGTTCACTCCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS-3UTR TCA 90 bp | CTCTTCTCTAGTTCTCCAGAGCACCTGCCTGAAGTCAAGAAGCTCTGTCCTGCACTTCCTCCGTACTGTTaGCAGGGCAGGTGGAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LFSSSPEHLPEVKKLCPALPPYC*QGRWSC Trigger: GCAACTCCACCTGCCCTGTCAACAGTACGGAGGAAG...TGCAGGACAGAGCTTCTTGACTTCAGGCAGGTGCTCTGGAGAACTAGAGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS-3UTR GCA 90 bp | TGTTTTGGAGATTGGGGCGATCCTGTATATCTACAGTTAGGAGATTCAAGGCACGCAGCCCTGTGGTGCTaGTCTGGCTGCACTGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: CFGDWGDPVYLQLGDSRHAALWC*SGCTGP Trigger: GGGGCCAGTGCAGCCAGAGCAGCACCACAGGGCTGC...GTGCCTTGAATCTCCTAACTGTAGATATACAGGATCGCCCCAATCTCCAAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS-3UTR CCA 90 bp | GGCGGGAGTGAACAGCAAAGCCCTTCTGAGACTGAACAATCTGTCCGGGATTCTGGCATAAGTCCAAACTaGGAAAGCAGGCCCACTGCG | + |
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Preference number: 4 (lower is better) Translates to: GGSEQQSPSETEQSVRDSGISPN*ESRPTA Trigger: CGCAGTGGGCCTGCTTTCCCAGTTTGGACTTATGCC...AGAATCCCGGACAGATTGTTCAGTCTCAGAAGGGCTTTGCTGTTCACTCCCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS-3UTR CCA 90 bp | GCCAACCATACATGGTCTTCACTGGCCACGGAGGAGGATGGAGGGCCAAGCTGGAGGACAGCAATAGCTTaGAATGGTTTCAGACCGAAG | + |
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Preference number: 4 (lower is better) Translates to: ANHTWSSLATEEDGGPSWRTAIA*NGFRPK Trigger: CTTCGGTCTGAAACCATTCCAAGCTATTGCTGTCCT...CCAGCTTGGCCCTCCATCCTCCTCCGTGGCCAGTGAAGACCATGTATGGTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS-3UTR CCA 90 bp | CTGGCGGGAGTGAACAGCAAAGCCCTTCTGAGACTGAACAATCTGTCCGGGATTCTTTGCCAAGATTGGTaGGTGAGGAATGCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LAGVNSKALLRLNNLSGILCQDW*VRNASR Trigger: CCTGCTGGCATTCCTCACCCACCAATCTTGGCAAAG...AATCCCGGACAGATTGTTCAGTCTCAGAAGGGCTTTGCTGTTCACTCCCGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS-3UTR CCA 90 bp | TCCACAATGGGAGGACAGCTTTGTGGGGAGACACCTCTGCTTTCTGCCAACCATAAGCACTGGTCTCTCTaGGCTGCTTCTCGTAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: STMGGQLCGETPLLSANHKHWSL*AASRSR Trigger: TCTGCTACGAGAAGCAGCCCAGAGAGACCAGTGCTT...ATGGTTGGCAGAAAGCAGAGGTGTCTCCCCACAAAGCTGTCCTCCCATTGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS-3UTR TCA 90 bp | TGCATGGCATTCTCCCTCTTGGATTACATTCCACAATGGGAGGACAGCTTTGTGTGCCCCAGGGTCTTCTaGGGTGCAACCAGAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: CMAFSLLDYIPQWEDSFVCPRVF*GATRAS Trigger: AGAAGCTCTGGTTGCACCTCAGAAGACCCTGGGGCA...CACAAAGCTGTCCTCCCATTGTGGAATGTAATCCAAGAGGGAGAATGCCATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS-3UTR CCA 90 bp | GCGGGAGTGAACAGCAAAGCCCTTCTGAGACTGAACAATCTGTCCGGGATTCTGGCAAAGTTTAGCAGCTaGACCAGGTACTCAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: AGVNSKALLRLNNLSGILAKFSS*TRYSAE Trigger: CTCTGCTGAGTACCTGGTCCAGCTGCTAAACTTTGC...CAGAATCCCGGACAGATTGTTCAGTCTCAGAAGGGCTTTGCTGTTCACTCCCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS-3UTR CCA 90 bp | TCCACAATGGGAGGACAGCTTTGTGGGGAGACACCTCTGCTTTCTGCCAACCATTCACATGAAGGAATGTaGCTAGTCAGCTCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: STMGGQLCGETPLLSANHSHEGM*LVSSAA Trigger: GGCTGCTGAGCTGACTAGCCACATTCCTTCATGTGA...ATGGTTGGCAGAAAGCAGAGGTGTCTCCCCACAAAGCTGTCCTCCCATTGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS-3UTR GCA 90 bp | CGTATGTCTCTGGTGTTTTGGAGATTGGGGCGATCCTGTATATCTACAGTTAGGCCGGGTGCTGTCTCCTaGATTTACTCTTCTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RMSLVFWRLGRSCISTVRPGAVS*IYSSAS Trigger: GGAGGCAGAAGAGTAAATGCAGGAGACAGCACCCGG...CCTAACTGTAGATATACAGGATCGCCCCAATCTCCAAAACACCAGAGACATACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS-3UTR TCA 90 bp | TGCATGGCATTCTCCCTCTTGGATTACATTCCACAATGGGAGGACAGCTTTGTGATCCAAAAGAGAACATaGCCAAACCCACCATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CMAFSLLDYIPQWEDSFVIQKRT*PNPPSQ Trigger: CTGTGATGGTGGGTTTGGTCATGTTCTCTTTTGGAT...CACAAAGCTGTCCTCCCATTGTGGAATGTAATCCAAGAGGGAGAATGCCATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTCTGGTGTTTTGGAGATTGGGGCGATCCTGTATATCTACAGTTAGGAGATTGCAACCAGAGCTTCTaGCTCTCCACAGAACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLWCFGDWGDPVYLQLGDCNQSF*LSTEHP Trigger: TGGATGTTCTGTGGAGAGTCAGAAGCTCTGGTTGCA...ATCTCCTAACTGTAGATATACAGGATCGCCCCAATCTCCAAAACACCAGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGAATACTTGAATGGATGAACGTATGTCTCTGGTGTTTTGGAGATTGGGGCGAGCGCCAGTCTCTATaGAAATGGTCCTGCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRILEWMNVCLWCFGDWGERQSL*KWSCTF Trigger: AAAGGTGCAGGACCATTTCCATAGAGACTGGCGCTC...GCCCCAATCTCCAAAACACCAGAGACATACGTTCATCCATTCAAGTATTCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS-3UTR GCA 90 bp | AACGTATGTCTCTGGTGTTTTGGAGATTGGGGCGATCCTGTATATCTACAGTTATGTGTTCCAGCCTTTTaGCAGGACCATGCCAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NVCLWCFGDWGDPVYLQLCVPAF*QDHASN Trigger: GTTACTGGCATGGTCCTGGCAAAAGGCTGGAACACA...TAACTGTAGATATACAGGATCGCCCCAATCTCCAAAACACCAGAGACATACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGAATACTTGAATGGATGAACGTATGTCTCTGGTGTTTTGGAGATTGGGGCCAGTCTCTATGGAAATaGTCCTGCACCTTTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRILEWMNVCLWCFGDWGQSLWK*SCTFAK Trigger: CTTGGCAAAGGTGCAGGACCATTTCCATAGAGACTG...GCCCCAATCTCCAAAACACCAGAGACATACGTTCATCCATTCAAGTATTCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTCTGGTGTTTTGGAGATTGGGGCGATCCTGTATATCTACAGTTAGGAGATTCAGACCGAAGCCAATaGCTAACAGATAAGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLWCFGDWGDPVYLQLGDSDRSQ*LTDKLS Trigger: TGACAGCTTATCTGTTAGCCATTGGCTTCGGTCTGA...ATCTCCTAACTGTAGATATACAGGATCGCCCCAATCTCCAAAACACCAGAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS-3UTR CCA 90 bp | AAGAATAAGCATCATACCACCGAAGCTAATTCTCTTAGTGTCTCTTCTCTAGTTCACCTTTGCCAAGATTaGTGGGTGAGGAATGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KNKHHTTEANSLSVSSLVHLCQD*WVRNAS Trigger: GCTGGCATTCCTCACCCACCAATCTTGGCAAAGGTG...AACTAGAGAAGAGACACTAAGAGAATTAGCTTCGGTGGTATGATGCTTATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| 3UTR CAA 72 bp | ACAAACAGGAAACAAGCCACAGGCTTTTCTGGTGATTaGGTGCTCAGAATACTTGAATGGATGAACGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: TNRKQATGFSGD*VLRILEWMNVC Trigger: ACATACGTTCATCCATTCAAGTATTCTGAGCACCAAATCACCAGAAAAGCCTGTGGCTTGTTTCCTGTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| 3UTR CAA 72 bp | GCCTTCAATAAATTACAGTCCTACATTACACAACATTaGGAAGCAGCCACTGTTCTAAGGAATGAGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AFNKLQSYITQH*EAATVLRNEVG Trigger: ACCTACCTCATTCCTTAGAACAGTGGCTGCTTCCAAATGTTGTGTAATGTAGGACTGTAATTTATTGAAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS GCA 90 bp | AGTGACGTCTGTGTTCCAGCCTTTTGCCAGGACCATGCCAGTAACTaGCACCACCAGGAGGAGCATGCCACCCAGAATGGCTCCGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: SDVCVPAFCQDHASN*HHQEEHATQNGSDL Trigger: AAGGTCGGAGCCATTCTGGGTGGCATGCTCCTCCTGGTGGTGGCAGTTACTGGCATGGTCCTGGCAAAAGGCTGGAACACAGACGTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS-3UTR CAA 90 bp | GCCAACCATACATGGTCTTCACTGGCCACGGAGGAGGATGGAGGGCCAAGCTGGAATGGTCCTGCACCTTaGCCAAGATTGGTGGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ANHTWSSLATEEDGGPSWNGPAP*PRLVGE Trigger: CTCACCCACCAATCTTGGCAAAGGTGCAGGACCATT...CCAGCTTGGCCCTCCATCCTCCTCCGTGGCCAGTGAAGACCATGTATGGTTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS TCA 90 bp | GTCCAAACTGGGAAAGCAGGCCCACTGCGATGCCCCAGGGTCTTCTaGGGTGCAACCAGAGCTTCTGACTCTCCACAGAACATCCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VQTGKAGPLRCPRVF*GATRASDSPQNIQK Trigger: CTTTTGGATGTTCTGTGGAGAGTCAGAAGCTCTGGTTGCACCTCAGAAGACCCTGGGGCATCGCAGTGGGCCTGCTTTCCCAGTTTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS GCA 90 bp | AATGCAGCTGATGACCAGAAGAGTGACGTCTGTGTTCCAGCCTTTTaGCAGGACCATGCCAGTAACTGCCACCACCAGGAGGAGCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: NAADDQKSDVCVPAF*QDHASNCHHQEEHA Trigger: GGCATGCTCCTCCTGGTGGTGGCAGTTACTGGCATGGTCCTGGCAAAAGGCTGGAACACAGACGTCACTCTTCTGGTCATCAGCTGCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS CCA 90 bp | CAAGAAAGCACTGGTCTCTCTGGGCTGCTTCTCGTAGCAGACGTCTaGGCAATCCGGGTGCTGTCTCCTGCATTTACTCTTCTGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QESTGLSGLLLVADV*AIRVLSPAFTLLPP Trigger: AGGAGGCAGAAGAGTAAATGCAGGAGACAGCACCCGGATTGCCCAGACGTCTGCTACGAGAAGCAGCCCAGAGAGACCAGTGCTTTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCGGGAGTGAACAGCAAAGCCCTTCTGAGACTGAACAATCTGTCCGGGATTCAGCCCGTGCAGCACTaGGAAGAGTCCATAGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LAGVNSKALLRLNNLSGIQPVQH*EESIGQ Trigger: TTGGCCTATGGACTCTTCCAAGTGCTGCACGGGCTG...AATCCCGGACAGATTGTTCAGTCTCAGAAGGGCTTTGCTGTTCACTCCCGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS TCA 90 bp | CCCACTGCGATGCCCCAGGGTCTTCTGAGGTGCAACCAGAGCTTCTaGCTCTCCACAGAACATCCAAAAGAGAACATGACCAAACCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PTAMPQGLLRCNQSF*LSTEHPKENMTKPT Trigger: GGTGGGTTTGGTCATGTTCTCTTTTGGATGTTCTGTGGAGAGTCAGAAGCTCTGGTTGCACCTCAGAAGACCCTGGGGCATCGCAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS TCA 90 bp | GAAGCCACAGGAACCACCAGGGACACAAGGGTAATTCCTATGCTCTaGTACGGAATGACGAGGTTCTGTGTCAGAGTCCAGGACCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EATGTTRDTRVIPML*YGMTRFCVRVQDRV Trigger: CACCCGGTCCTGGACTCTGACACAGAACCTCGTCATTCCGTATCAGAGCATAGGAATTACCCTTGTGTCCCTGGTGGTTCCTGTGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS GCA 90 bp | ATAAGCTGTCAGAGGCATAAGTCCAAACTGGGAAAGCAGGCCCACTaGGATGCCCCAGGGTCTTCTGAGGTGCAACCAGAGCTTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: ISCQRHKSKLGKQAH*DAPGSSEVQPELLT Trigger: AGTCAGAAGCTCTGGTTGCACCTCAGAAGACCCTGGGGCATCGCAGTGGGCCTGCTTTCCCAGTTTGGACTTATGCCTCTGACAGCTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS GCA 90 bp | GCTGCTTCTCGTAGCAGACGTCTGGGCAATCCGGGTGCTGTCTCCTaGATTTACTCTTCTGCCTCCTCTTGTATGCCTGATATGCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: AASRSRRLGNPGAVS*IYSSASSCMPDMLR Trigger: TCGCAGCATATCAGGCATACAAGAGGAGGCAGAAGAGTAAATGCAGGAGACAGCACCCGGATTGCCCAGACGTCTGCTACGAGAAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS GCA 90 bp | GAGGAGCATGCCACCCAGAATGGCTCCGACCTTGAGAATGACCGTTaGTTGCTTTGGCCACCTATAATTCACATAGACGCCAGAAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: EEHATQNGSDLENDR*LLWPPIIHIDARSH Trigger: GTGGCTTCTGGCGTCTATGTGAATTATAGGTGGCCAAAGCAAGCAACGGTCATTCTCAAGGTCGGAGCCATTCTGGGTGGCATGCTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS GCA 90 bp | ATCCGGGTGCTGTCTCCTGCATTTACTCTTCTGCCTCCTCTTGTATaGCTGATATGCTGCGACAATGAGCAGCCCGTGCAGCACTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: IRVLSPAFTLLPPLV*LICCDNEQPVQHLE Trigger: TTCCAAGTGCTGCACGGGCTGCTCATTGTCGCAGCATATCAGGCATACAAGAGGAGGCAGAAGAGTAAATGCAGGAGACAGCACCCGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS CCA 90 bp | GCCACCCAGAATGGCTCCGACCTTGAGAATGACCGTTGCTTGCTTTaGCCACCTATAATTCACATAGACGCCAGAAGCCACAGGAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: ATQNGSDLENDRCLL*PPIIHIDARSHRNH Trigger: GTGGTTCCTGTGGCTTCTGGCGTCTATGTGAATTATAGGTGGCCAAAGCAAGCAACGGTCATTCTCAAGGTCGGAGCCATTCTGGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS GCA 90 bp | TCTCCTGCATTTACTCTTCTGCCTCCTCTTGTATGCCTGATATGCTaGGACAATGAGCAGCCCGTGCAGCACTTGGAAGAGTCCATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPAFTLLPPLVCLIC*DNEQPVQHLEESIG Trigger: GCCTATGGACTCTTCCAAGTGCTGCACGGGCTGCTCATTGTCGCAGCATATCAGGCATACAAGAGGAGGCAGAAGAGTAAATGCAGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS GCA 90 bp | CTGTCTCCTGCATTTACTCTTCTGCCTCCTCTTGTATGCCTGATATaGTGCGACAATGAGCAGCCCGTGCAGCACTTGGAAGAGTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: LSPAFTLLPPLVCLI*CDNEQPVQHLEESI Trigger: TATGGACTCTTCCAAGTGCTGCACGGGCTGCTCATTGTCGCAGCATATCAGGCATACAAGAGGAGGCAGAAGAGTAAATGCAGGAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS TCA 90 bp | ATTTACTCTTCTGCCTCCTCTTGTATGCCTGATATGCTGCGACAATaGGCAGCCCGTGCAGCACTTGGAAGAGTCCATAGGCCAATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: IYSSASSCMPDMLRQ*AARAALGRVHRPMQ Trigger: TTGCATTGGCCTATGGACTCTTCCAAGTGCTGCACGGGCTGCTCATTGTCGCAGCATATCAGGCATACAAGAGGAGGCAGAAGAGTAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTGCATGGCATTCTCCCTCTTGGATTACATTCCACAATGGGAGGACAGCTTGAGGACAGCAATAGCTaGGAATGGTTTCAGACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: PLHGILPLGLHSTMGGQLEDSNS*EWFQTE Trigger: TTCGGTCTGAAACCATTCCAAGCTATTGCTGTCCTC...AAGCTGTCCTCCCATTGTGGAATGTAATCCAAGAGGGAGAATGCCATGCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS-3UTR CAA 90 bp | AAGAATAAGCATCATACCACCGAAGCTAATTCTCTTAGTGTCTCTTCTCTAGTTGCACCTTTGCCAAGATaGGTGGGTGAGGAATGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KNKHHTTEANSLSVSSLVAPLPR*VGEECQ Trigger: CTGGCATTCCTCACCCACCAATCTTGGCAAAGGTGC...AACTAGAGAAGAGACACTAAGAGAATTAGCTTCGGTGGTATGATGCTTATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS TCA 72 bp | CCTCCATTCCCACGGGCGGGTCTTCCTCCGTACTGTTaGCAGGGCAGGTGGAGTTGCCCGCACAGTCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PPFPRAGLPPYC*QGRWSCPHSLC Trigger: GCACAGACTGTGCGGGCAACTCCACCTGCCCTGTCAACAGTACGGAGGAAGACCCGCCCGTGGGAATGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS GCA 72 bp | CTAGTCAGCTCAGCAGCCCTGTGGTGCTGCTCTGGCTaGACTGGCCCCAGAGTTACGGCAGCCTCATCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LVSSAALWCCSG*TGPRVTAASSP Trigger: AGGGGATGAGGCTGCCGTAACTCTGGGGCCAGTGCAGCCAGAGCAGCACCACAGGGCTGCTGAGCTGACTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS CCA 72 bp | GTGGCTAGTCAGCTCAGCAGCCCTGTGGTGCTGCTCTaGCTGCACTGGCCCCAGAGTTACGGCAGCCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: VASQLSSPVVLL*LHWPQSYGSLI Trigger: GATGAGGCTGCCGTAACTCTGGGGCCAGTGCAGCCAGAGCAGCACCACAGGGCTGCTGAGCTGACTAGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS CCA 72 bp | CAGCTCAGCAGCCCTGTGGTGCTGCTCTGGCTGCACTaGCCCCAGAGTTACGGCAGCCTCATCCCCTTTATC | + |
|
Preference number: 6 (lower is better) Translates to: QLSSPVVLLWLH*PQSYGSLIPFI Trigger: GATAAAGGGGATGAGGCTGCCGTAACTCTGGGGCCAGTGCAGCCAGAGCAGCACCACAGGGCTGCTGAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS GCA 72 bp | GAAGGAATGTGGCTAGTCAGCTCAGCAGCCCTGTGGTaGTGCTCTGGCTGCACTGGCCCCAGAGTTACGGCA | + |
|
Preference number: 6 (lower is better) Translates to: EGMWLVSSAALW*CSGCTGPRVTA Trigger: TGCCGTAACTCTGGGGCCAGTGCAGCCAGAGCAGCACCACAGGGCTGCTGAGCTGACTAGCCACATTCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS TCA 72 bp | GGGAAAGCAGGCCCACTGCGATGCCCCAGGGTCTTCTaGGGTGCAACCAGAGCTTCTGACTCTCCACAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GKAGPLRCPRVF*GATRASDSPQN Trigger: GTTCTGTGGAGAGTCAGAAGCTCTGGTTGCACCTCAGAAGACCCTGGGGCATCGCAGTGGGCCTGCTTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS CCA 72 bp | CATGAAGGAATGTGGCTAGTCAGCTCAGCAGCCCTGTaGTGCTGCTCTGGCTGCACTGGCCCCAGAGTTACG | + |
|
Preference number: 6 (lower is better) Translates to: HEGMWLVSSAAL*CCSGCTGPRVT Trigger: CGTAACTCTGGGGCCAGTGCAGCCAGAGCAGCACCACAGGGCTGCTGAGCTGACTAGCCACATTCCTTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS GCA 72 bp | CAGAGGCATAAGTCCAAACTGGGAAAGCAGGCCCACTaGGATGCCCCAGGGTCTTCTGAGGTGCAACCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QRHKSKLGKQAH*DAPGSSEVQPE Trigger: CTCTGGTTGCACCTCAGAAGACCCTGGGGCATCGCAGTGGGCCTGCTTTCCCAGTTTGGACTTATGCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS GCA 72 bp | TGTGTTCCAGCCTTTTGCCAGGACCATGCCAGTAACTaGCACCACCAGGAGGAGCATGCCACCCAGAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: CVPAFCQDHASN*HHQEEHATQNG Trigger: GCCATTCTGGGTGGCATGCTCCTCCTGGTGGTGGCAGTTACTGGCATGGTCCTGGCAAAAGGCTGGAACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS CCA 72 bp | GGACCAGGTACTCAGCAGAGAAGGACAGCTGCAGCATaGCGATGCACAGCTGGATGTTCTGAGCGCCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPGTQQRRTAAA*RCTAGCSERQS Trigger: AGACTGGCGCTCAGAACATCCAGCTGTGCATCGCCATGCTGCAGCTGTCCTTCTCTGCTGAGTACCTGGTCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS TCA 72 bp | GACAGCTGCAGCATGGCGATGCACAGCTGGATGTTCTaGGCGCCAGTCTCTATGGAAATGGTCCTGCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: DSCSMAMHSWMF*APVSMEMVLHL Trigger: AAGGTGCAGGACCATTTCCATAGAGACTGGCGCTCAGAACATCCAGCTGTGCATCGCCATGCTGCAGCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS GCA 72 bp | GATGACCAGAAGAGTGACGTCTGTGTTCCAGCCTTTTaGCAGGACCATGCCAGTAACTGCCACCACCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DDQKSDVCVPAF*QDHASNCHHQE Trigger: CTCCTGGTGGTGGCAGTTACTGGCATGGTCCTGGCAAAAGGCTGGAACACAGACGTCACTCTTCTGGTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS CCA 72 bp | CCTCATCCCCTTTATCCAAGAAAGCACTGGTCTCTCTaGGCTGCTTCTCGTAGCAGACGTCTGGGCAATCCG | + |
|
Preference number: 6 (lower is better) Translates to: PHPLYPRKHWSL*AASRSRRLGNP Trigger: CGGATTGCCCAGACGTCTGCTACGAGAAGCAGCCCAGAGAGACCAGTGCTTTCTTGGATAAAGGGGATGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS CAA 90 bp | CTGGATGTTCTGAGCGCCAGTCTCTATGGAAATGGTCCTGCACCTTaGCCAAGATTGGTGGGTGAGGAATGCCAGCAGGAAGCCTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LDVLSASLYGNGPAP*PRLVGEECQQEACD Trigger: GTCACAGGCTTCCTGCTGGCATTCCTCACCCACCAATCTTGGCAAAGGTGCAGGACCATTTCCATAGAGACTGGCGCTCAGAACATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS GCA 72 bp | CGTAGCAGACGTCTGGGCAATCCGGGTGCTGTCTCCTaGATTTACTCTTCTGCCTCCTCTTGTATGCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: RSRRLGNPGAVS*IYSSASSCMPD Trigger: ATCAGGCATACAAGAGGAGGCAGAAGAGTAAATGCAGGAGACAGCACCCGGATTGCCCAGACGTCTGCTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS CCA 72 bp | CGATGCACAGCTGGATGTTCTGAGCGCCAGTCTCTATaGAAATGGTCCTGCACCTTTGCCAAGATTGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RCTAGCSERQSL*KWSCTFAKIGG Trigger: CCCACCAATCTTGGCAAAGGTGCAGGACCATTTCCATAGAGACTGGCGCTCAGAACATCCAGCTGTGCATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS CAA 72 bp | CTGAGCGCCAGTCTCTATGGAAATGGTCCTGCACCTTaGCCAAGATTGGTGGGTGAGGAATGCCAGCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LSASLYGNGPAP*PRLVGEECQQE Trigger: TTCCTGCTGGCATTCCTCACCCACCAATCTTGGCAAAGGTGCAGGACCATTTCCATAGAGACTGGCGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS CAA 90 bp | GAGCATGCCACCCAGAATGGCTCCGACCTTGAGAATGACCGTTGCTaGCTTTGGCCACCTATAATTCACATAGACGCCAGAAGCCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: EHATQNGSDLENDRC*LWPPIIHIDARSHR Trigger: CCTGTGGCTTCTGGCGTCTATGTGAATTATAGGTGGCCAAAGCAAGCAACGGTCATTCTCAAGGTCGGAGCCATTCTGGGTGGCATGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS GCA 72 bp | GCCACCCAGAATGGCTCCGACCTTGAGAATGACCGTTaGTTGCTTTGGCCACCTATAATTCACATAGACGCC | + |
|
Preference number: 6 (lower is better) Translates to: ATQNGSDLENDR*LLWPPIIHIDA Trigger: GGCGTCTATGTGAATTATAGGTGGCCAAAGCAAGCAACGGTCATTCTCAAGGTCGGAGCCATTCTGGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS CCA 72 bp | CCAGGGCAGCTCCCCATCATGAGGACAGCAATAGCTTaGAATGGTTTCAGACCGAAGCCAATGGCTAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: PGQLPIMRTAIA*NGFRPKPMANR Trigger: TCTGTTAGCCATTGGCTTCGGTCTGAAACCATTCCAAGCTATTGCTGTCCTCATGATGGGGAGCTGCCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
||
| CDS CCA 72 bp | GTCTCTATGGAAATGGTCCTGCACCTTTGCCAAGATTaGTGGGTGAGGAATGCCAGCAGGAAGCCTGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: VSMEMVLHLCQD*WVRNASRKPVT Trigger: TGTCACAGGCTTCCTGCTGGCATTCCTCACCCACCAATCTTGGCAAAGGTGCAGGACCATTTCCATAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS TCA 72 bp | ATGCCCCAGGGTCTTCTGAGGTGCAACCAGAGCTTCTaGCTCTCCACAGAACATCCAAAAGAGAACATGACC | + |
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Preference number: 6 (lower is better) Translates to: MPQGLLRCNQSF*LSTEHPKENMT Trigger: GGTCATGTTCTCTTTTGGATGTTCTGTGGAGAGTCAGAAGCTCTGGTTGCACCTCAGAAGACCCTGGGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS TCA 72 bp | GGAACCACCAGGGACACAAGGGTAATTCCTATGCTCTaGTACGGAATGACGAGGTTCTGTGTCAGAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GTTRDTRVIPML*YGMTRFCVRVQ Trigger: CTGGACTCTGACACAGAACCTCGTCATTCCGTATCAGAGCATAGGAATTACCCTTGTGTCCCTGGTGGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS GCA 72 bp | TTTACTCTTCTGCCTCCTCTTGTATGCCTGATATGCTaGGACAATGAGCAGCCCGTGCAGCACTTGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: FTLLPPLVCLIC*DNEQPVQHLEE Trigger: CTCTTCCAAGTGCTGCACGGGCTGCTCATTGTCGCAGCATATCAGGCATACAAGAGGAGGCAGAAGAGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS CCA 72 bp | AATGGCTCCGACCTTGAGAATGACCGTTGCTTGCTTTaGCCACCTATAATTCACATAGACGCCAGAAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: NGSDLENDRCLL*PPIIHIDARSH Trigger: GTGGCTTCTGGCGTCTATGTGAATTATAGGTGGCCAAAGCAAGCAACGGTCATTCTCAAGGTCGGAGCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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| CDS CAA 72 bp | ACCCAGAATGGCTCCGACCTTGAGAATGACCGTTGCTaGCTTTGGCCACCTATAATTCACATAGACGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: TQNGSDLENDRC*LWPPIIHIDAR Trigger: TCTGGCGTCTATGTGAATTATAGGTGGCCAAAGCAAGCAACGGTCATTCTCAAGGTCGGAGCCATTCTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031263.2 |
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