Pregenerated sensors for SLC10A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058921Ensembl transcript IDs: ENSMUST00000078748.4
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCAGGACTCCATGGGGCTCATTGCAGCCTCTGCTGCTTCTTCCTTaGTACAGTCAGGTAACTCAGCACAATCCATTCTCCTGCCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: SRTPWGSLQPLLLLP*YSQVTQHNPFSCQV Trigger: CACTTGGCAGGAGAATGGATTGTGCTGAGTTACCTGACTGTAGCAAGGAAGAAGCAGCAGAGGCTGCAATGAGCCCCATGGAGTCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR CCA 90 bp | GACACATTCTCAGTGCCATCAAGCACAGCTAGAAAGAGAGCTGCCTaGCCTTTGATGGGCAAATGGTGGCACCTCCATAGGTTGGTATTA | + |
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Preference number: 1 (lower is better) Translates to: DTFSVPSSTARKRAA*PLMGKWWHLHRLVL Trigger: TAATACCAACCTATGGAGGTGCCACCATTTGCCCATCAAAGGCCAGGCAGCTCTCTTTCTAGCTGTGCTTGATGGCACTGAGAATGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR GCA 90 bp | AAGAAGAAAACTCTAAGCACACACAAACATGTACACTCACATGACTaGACACACACACACACACACACACACATACACTGGGGTGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: KKKTLSTHKHVHSHD*THTHTHTHIHWGGR Trigger: CCTCCCACCCCAGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGCAGTCATGTGAGTGTACATGTTTGTGTGTGCTTAGAGTTTTCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR TCA 90 bp | CCAAAATCCGCAGAGAATCTTCATGGCTCAACCACTTGCTCTGGATaGCCAACAAAGGCTAGTTTATGGTTCTTAAAATGTTTCCTCACG | + |
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Preference number: 1 (lower is better) Translates to: PKSAENLHGSTTCSG*PTKASLWFLKCFLT Trigger: CGTGAGGAAACATTTTAAGAACCATAAACTAGCCTTTGTTGGTCATCCAGAGCAAGTGGTTGAGCCATGAAGATTCTCTGCGGATTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR CCA 90 bp | TTTCATGAAGAGTCCCTGCACAATACAGATGAGGAAAACAAAGCTTaGAGAAGTCAGGGGATTTGTCCCAAACTCACACAACAAGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: FHEESLHNTDEENKA*RSQGICPKLTQQEH Trigger: ATGCTCTTGTTGTGTGAGTTTGGGACAAATCCCCTGACTTCTCCAAGCTTTGTTTTCCTCATCTGTATTGTGCAGGGACTCTTCATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR TCA 90 bp | AGTACCATGGTAAGTATGTTACTTTTAAGTGGAACTCTATCCAGATaGCCTACCCACAAGATGACCACAATGCCCTGGCATAATTACTTG | + |
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Preference number: 1 (lower is better) Translates to: STMVSMLLLSGTLSR*PTHKMTTMPWHNYL Trigger: CAAGTAATTATGCCAGGGCATTGTGGTCATCTTGTGGGTAGGTCATCTGGATAGAGTTCCACTTAAAAGTAACATACTTACCATGGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR TCA 90 bp | AATGCTAAAACTTATGTGGTGTCCCAAAGTTCACTGGAGAATTATTaGCTGAGATTAAAATGGTGGAGTCTCCATAAGCCAGGTGAGCTA | + |
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Preference number: 1 (lower is better) Translates to: NAKTYVVSQSSLENY*LRLKWWSLHKPGEL Trigger: TAGCTCACCTGGCTTATGGAGACTCCACCATTTTAATCTCAGTCAATAATTCTCCAGTGAACTTTGGGACACCACATAAGTTTTAGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR TCA 90 bp | AATCAAAACAAGAAATTATCAACAACATGTAACATGTCTCAGAGATaGGTGGCAGGGACAGCAAATCGGATTGATAAACCCACAAAGACA | + |
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Preference number: 1 (lower is better) Translates to: NQNKKLSTTCNMSQR*VAGTANRIDKPTKT Trigger: TGTCTTTGTGGGTTTATCAATCCGATTTGCTGTCCCTGCCACTCATCTCTGAGACATGTTACATGTTGTTGATAATTTCTTGTTTTGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR TCA 90 bp | TTTCGGGCTACAGGCACCTGCCACCACACCAGACAGCACTTGTGCTCTTACGTGGAGCTGCCTGGCCTTTaGTGGGCAAATGGTGGCACC | + |
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Preference number: 2 (lower is better) Translates to: FRATGTCHHTRQHLCSYVELPGL*WANGGT Trigger: GGTGCCACCATTTGCCCATCAAAGGCCAGGCAGCTC...CACGTAAGAGCACAAGTGCTGTCTGGTGTGGTGGCAGGTGCCTGTAGCCCGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR GCA 90 bp | ATCCTGCCTCCACTTTCGGGCTACAGGCACCTGCCACCACACCAGACAGCACTTCTCCATGGGGCTCATTaGAGCCTCTGCTGCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ILPPLSGYRHLPPHQTALLHGAH*SLCCFF Trigger: GAAGAAGCAGCAGAGGCTGCAATGAGCCCCATGGAG...AAGTGCTGTCTGGTGTGGTGGCAGGTGCCTGTAGCCCGAAAGTGGAGGCAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR TCA 90 bp | ATCCTGCCTCCACTTTCGGGCTACAGGCACCTGCCACCACACCAGACAGCACTTGGAACTCTATCCAGATaGCCTACCCACAAGATGACC | + |
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Preference number: 2 (lower is better) Translates to: ILPPLSGYRHLPPHQTALGTLSR*PTHKMT Trigger: GGTCATCTTGTGGGTAGGTCATCTGGATAGAGTTCC...AAGTGCTGTCTGGTGTGGTGGCAGGTGCCTGTAGCCCGAAAGTGGAGGCAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR GCA 90 bp | ATCCTGCCTCCACTTTCGGGCTACAGGCACCTGCCACCACACCAGACAGCACTTCTGCTGCTTCTTCCTTaGTACAGTCAGGTAACTCAG | + |
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Preference number: 2 (lower is better) Translates to: ILPPLSGYRHLPPHQTALLLLLP*YSQVTQ Trigger: CTGAGTTACCTGACTGTAGCAAGGAAGAAGCAGCAG...AAGTGCTGTCTGGTGTGGTGGCAGGTGCCTGTAGCCCGAAAGTGGAGGCAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR GCA 90 bp | TACTCTTCTGAAGCCTGCTGCCTTAAGACACTGATGTGGGTGTCTATCACATACTCATGGCAGTCCCACTaGCTGGCATCCCTCTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: YSSEACCLKTLMWVSITYSWQSH*LASLLL Trigger: GAGCAAGAGGGATGCCAGGCAGTGGGACTGCCATGA...GTATGTGATAGACACCCACATCAGTGTCTTAAGGCAGCAGGCTTCAGAAGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR TCA 90 bp | GGCAGTTGCTCTCCGCACCTGCAGCCCTCAATACTAAGGACCATAGGCTTTGTAGTTAGAACGGTTTCATaGAGAGTCCCTGCACAATAC | + |
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Preference number: 2 (lower is better) Translates to: GSCSPHLQPSILRTIGFVVRTVS*RVPAQY Trigger: GTATTGTGCAGGGACTCTTCATGAAACCGTTCTAAC...TACAAAGCCTATGGTCCTTAGTATTGAGGGCTGCAGGTGCGGAGAGCAACTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR TCA 90 bp | AGCACAATCCATTCTCCTGCCAAGTGCCTGCTGAAAGCCAAGCGCACAAAGGAGCGTTTGTTTACTGTTTaGTTAATCGAGGTAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: STIHSPAKCLLKAKRTKERLFTV*LIEVGS Trigger: AGAGCCTACCTCGATTAATCAAACAGTAAACAAACG...CTCCTTTGTGCGCTTGGCTTTCAGCAGGCACTTGGCAGGAGAATGGATTGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR TCA 90 bp | CCGCACCTGCAGCCCTCAATACTAAGGACCATAGGCTTTGTAAATACTATACAAGCAAAGCAGGACAGATaGGGGACCAGGTATCAGATG | + |
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Preference number: 2 (lower is better) Translates to: PHLQPSILRTIGFVNTIQAKQDR*GTRYQM Trigger: CATCTGATACCTGGTCCCTCATCTGTCCTGCTTTGC...TTGTATAGTATTTACAAAGCCTATGGTCCTTAGTATTGAGGGCTGCAGGTGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGCCTCCCCTGACATTGCAAAGCAGGACAGATGAGGGACCAGGTATCAGAGGCACCTCCATAGGTTaGTATTACGCAAATGCATTT | + |
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Preference number: 2 (lower is better) Translates to: KEPPLTLQSRTDEGPGIRGTSIG*YYANAF Trigger: AAATGCATTTGCGTAATACCAACCTATGGAGGTGCC...TCTGATACCTGGTCCCTCATCTGTCCTGCTTTGCAATGTCAGGGGAGGCTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAACAAAGCTTGGAGAAGTCAGGGGATTTGTCCCAAACTCACACAACAAGCTAGGTTCAAACTCATaGCAGTCCCACTGCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: RKTKLGEVRGFVPNSHNKLGSNS*QSHCLA Trigger: TGCCAGGCAGTGGGACTGCCATGAGTTTGAACCTAG...CTTGTTGTGTGAGTTTGGGACAAATCCCCTGACTTCTCCAAGCTTTGTTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGATGAGGAAAACAAAGCTTGGAGAAGTCAGGGGATTTGTCCCAAACTCACACACACACACATACACTaGGGTGGGAGGGGTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: TDEENKAWRSQGICPKLTHTHIH*GGRGSV Trigger: AACAGAACCCCTCCCACCCCAGTGTATGTGTGTGTG...TGTGAGTTTGGGACAAATCCCCTGACTTCTCCAAGCTTTGTTTTCCTCATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR GCA 90 bp | GAGTGTGTGGAGGTGGCTCTGATGTCTATAGAGACCTCCATACATGACAAGAAGGTGACACATTCTCAGTaGCATCAAGCACAGCTAGAA | + |
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Preference number: 2 (lower is better) Translates to: ECVEVALMSIETSIHDKKVTHSQ*HQAQLE Trigger: TTCTAGCTGTGCTTGATGGCACTGAGAATGTGTCAC...CTTCTTGTCATGTATGGAGGTCTCTATAGACATCAGAGCCACCTCCACACACTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR GCA 90 bp | CCGCACCTGCAGCCCTCAATACTAAGGACCATAGGCTTTGTAAATACTATACAACATTGCAGCCTCTGCTaGTTCTTCCTTGCTACAGTC | + |
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Preference number: 2 (lower is better) Translates to: PHLQPSILRTIGFVNTIQHCSLC*FFLATV Trigger: GACTGTAGCAAGGAAGAAGCAGCAGAGGCTGCAATG...TTGTATAGTATTTACAAAGCCTATGGTCCTTAGTATTGAGGGCTGCAGGTGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR TCA 90 bp | GAGGAAAACAAAGCTTGGAGAAGTCAGGGGATTTGTCCCAAACTCACACAACAAGCTGCCTTAAGACACTaGTGTGGGTGTCTATCACAT | + |
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Preference number: 2 (lower is better) Translates to: EENKAWRSQGICPKLTQQAALRH*CGCLSH Trigger: ATGTGATAGACACCCACATCAGTGTCTTAAGGCAGC...TTGTTGTGTGAGTTTGGGACAAATCCCCTGACTTCTCCAAGCTTTGTTTTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR CAA 90 bp | CATGTAACATGTCTCAGAGATGAGTGGCAGGGACAGCAAATCGGATaGATAAACCCACAAAGACAAAATGAGTCTACTCTTCTGAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: HVTCLRDEWQGQQIG*INPQRQNESTLLKP Trigger: AGGCTTCAGAAGAGTAGACTCATTTTGTCTTTGTGGGTTTATCAATCCGATTTGCTGTCCCTGCCACTCATCTCTGAGACATGTTACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR CCA 90 bp | CCGCACCTGCAGCCCTCAATACTAAGGACCATAGGCTTTGTAAATACTATACAACTGAGATTAAAATGGTaGAGTCTCCATAAGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: PHLQPSILRTIGFVNTIQLRLKW*SLHKPG Trigger: ACCTGGCTTATGGAGACTCCACCATTTTAATCTCAG...TTGTATAGTATTTACAAAGCCTATGGTCCTTAGTATTGAGGGCTGCAGGTGCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR TCA 90 bp | GAGGAAAACAAAGCTTGGAGAAGTCAGGGGATTTGTCCCAAACTCACACAACAAATATGGTTTCATGATTaGTGGAACATAGGTAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: EENKAWRSQGICPKLTQQIWFHD*WNIGRS Trigger: GCTCCTACCTATGTTCCATCAATCATGAAACCATAT...TTGTTGTGTGAGTTTGGGACAAATCCCCTGACTTCTCCAAGCTTTGTTTTCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR TCA 90 bp | CCGCACCTGCAGCCCTCAATACTAAGGACCATAGGCTTTGTAAATACTATACAATGGCATAATTACTTGTaGAGTGATTGGTTCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PHLQPSILRTIGFVNTIQWHNYL*SDWFSG Trigger: TCCTGAGAACCAATCACTTCACAAGTAATTATGCCA...TTGTATAGTATTTACAAAGCCTATGGTCCTTAGTATTGAGGGCTGCAGGTGCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGAAAACAAAGCTTGGAGAAGTCAGGGGATTTGTCCCAAACTCACACAACAATCAAGAGCTTGGTTTTaGGGTCCTCTATTATCAGTT | + |
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Preference number: 2 (lower is better) Translates to: EENKAWRSQGICPKLTQQSRAWF*GPLLSV Trigger: AACTGATAATAGAGGACCCCAAAACCAAGCTCTTGA...TTGTTGTGTGAGTTTGGGACAAATCCCCTGACTTCTCCAAGCTTTGTTTTCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR CCA 90 bp | CCGCACCTGCAGCCCTCAATACTAAGGACCATAGGCTTTGTAAATACTATACAATTATGTAGCATAGGTTaGCTTCTGAAGTCTTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: PHLQPSILRTIGFVNTIQLCSIG*LLKSLS Trigger: GCTCAAAGACTTCAGAAGCCAACCTATGCTACATAA...TTGTATAGTATTTACAAAGCCTATGGTCCTTAGTATTGAGGGCTGCAGGTGCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGAAAACAAAGCTTGGAGAAGTCAGGGGATTTGTCCCAAACTCACACAACAAAAGAAAGAACAGATTTaGTTGTATCAGCCCAAAACA | + |
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Preference number: 2 (lower is better) Translates to: EENKAWRSQGICPKLTQQKKEQI*LYQPKT Trigger: TGTTTTGGGCTGATACAACCAAATCTGTTCTTTCTT...TTGTTGTGTGAGTTTGGGACAAATCCCCTGACTTCTCCAAGCTTTGTTTTCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR CAA 90 bp | AGACATCCACCACCACACCATCAGGTCTTTTGTAAATCATGCTTTTaGTACACTGGACTTAGTGACATAAGAAAGAACAGATTTGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: RHPPPHHQVFCKSCF*YTGLSDIRKNRFGC Trigger: ACAACCAAATCTGTTCTTTCTTATGTCACTAAGTCCAGTGTACAAAAAGCATGATTTACAAAAGACCTGATGGTGTGGTGGTGGATGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR GCA 90 bp | GGTGAGCTACTCAGGAGTAGAGTCTATCTCCATGTTATTCAATATGGTTTCATGTTGGTATTACGCAAATaGATTTATAGTTTGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: GELLRSRVYLHVIQYGFMLVLRK*IYSLSL Trigger: GAGGCTCAAACTATAAATGCATTTGCGTAATACCAA...CATGAAACCATATTGAATAACATGGAGATAGACTCTACTCCTGAGTAGCTCACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR CAA 90 bp | GAGTGTGTGGAGGTGGCTCTGATGTCTATAGAGACCTCCATACATGACAAGAAGAGAGCTGCCTGGCCTTaGATGGGCAAATGGTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: ECVEVALMSIETSIHDKKRAAWP*MGKWWH Trigger: GTGCCACCATTTGCCCATCAAAGGCCAGGCAGCTCT...CTTCTTGTCATGTATGGAGGTCTCTATAGACATCAGAGCCACCTCCACACACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR CAA 90 bp | TTTCGGGCTACAGGCACCTGCCACCACACCAGACAGCACTTGTGCTCTTACGTGGGACAGCAAATCGGATaGATAAACCCACAAAGACAA | + |
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Preference number: 3 (lower is better) Translates to: FRATGTCHHTRQHLCSYVGQQIG*INPQRQ Trigger: TTGTCTTTGTGGGTTTATCAATCCGATTTGCTGTCC...CACGTAAGAGCACAAGTGCTGTCTGGTGTGGTGGCAGGTGCCTGTAGCCCGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR GCA 72 bp | TGCTACAGTCAGGTAACTCAGCACAATCCATTCTCCTaGCAAGTGCCTGCTGAAAGCCAAGCGCACAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: CYSQVTQHNPFS*QVPAESQAHKG Trigger: TCCTTTGTGCGCTTGGCTTTCAGCAGGCACTTGGCAGGAGAATGGATTGTGCTGAGTTACCTGACTGTAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR CCA 72 bp | GCTAGAAAGAGAGCTGCCTGGCCTTTGATGGGCAAATaGTGGCACCTCCATAGGTTGGTATTACGCAAATGC | + |
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Preference number: 3 (lower is better) Translates to: ARKRAAWPLMGK*WHLHRLVLRKC Trigger: GCATTTGCGTAATACCAACCTATGGAGGTGCCACCATTTGCCCATCAAAGGCCAGGCAGCTCTCTTTCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR CAA 90 bp | TCAGTGCCATCAAGCACAGCTAGAAAGAGAGCTGCCTGGCCTTTGATGGGCAAAGAACGGGCATTTCTGTaGAAAAGCCAAATGCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: SVPSSTARKRAAWPLMGKERAFL*KSQMLQ Trigger: CTGGAGCATTTGGCTTTTCAACAGAAATGCCCGTTC...TTTGCCCATCAAAGGCCAGGCAGCTCTCTTTCTAGCTGTGCTTGATGGCACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR CAA 90 bp | TTTCGGGCTACAGGCACCTGCCACCACACCAGACAGCACTTGTGCTCTTACGTGCATACTCATGGTTTTTaGCTCTTCCACAAAAGACCT | + |
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Preference number: 3 (lower is better) Translates to: FRATGTCHHTRQHLCSYVHTHGF*LFHKRP Trigger: AGGTCTTTTGTGGAAGAGCAAAAAACCATGAGTATG...CACGTAAGAGCACAAGTGCTGTCTGGTGTGGTGGCAGGTGCCTGTAGCCCGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR GCA 72 bp | CTGTTGAAAAGCCAAATGCTCCAGGGAGGTAGCCACTaGTTTTCTGATCAGGATAGACATCCACCACCACAC | + |
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Preference number: 3 (lower is better) Translates to: LLKSQMLQGGSH*FSDQDRHPPPH Trigger: GTGTGGTGGTGGATGTCTATCCTGATCAGAAAAGCAGTGGCTACCTCCCTGGAGCATTTGGCTTTTCAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR CAA 90 bp | CCGCACCTGCAGCCCTCAATACTAAGGACCATAGGCTTTGTAAATACTATACAAACTCCATGGGGCTCATaGCAGCCTCTGCTGCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: PHLQPSILRTIGFVNTIQTPWGS*QPLLLL Trigger: AAGAAGCAGCAGAGGCTGCAATGAGCCCCATGGAGT...TTGTATAGTATTTACAAAGCCTATGGTCCTTAGTATTGAGGGCTGCAGGTGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR CCA 72 bp | AGAAAGAGAGCTGCCTGGCCTTTGATGGGCAAATGGTaGCACCTCCATAGGTTGGTATTACGCAAATGCATT | + |
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Preference number: 3 (lower is better) Translates to: RKRAAWPLMGKW*HLHRLVLRKCI Trigger: AATGCATTTGCGTAATACCAACCTATGGAGGTGCCACCATTTGCCCATCAAAGGCCAGGCAGCTCTCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR CCA 72 bp | TGTTCTGATTCCGTTATAGCAGCACTGACTGCAGGCTaGTGTCACACAATACAGAACCCTGTTGCTGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: CSDSVIAALTAG*CHTIQNPVAEC Trigger: ACACTCAGCAACAGGGTTCTGTATTGTGTGACACCAGCCTGCAGTCAGTGCTGCTATAACGGAATCAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR CAA 90 bp | GGCAGTTGCTCTCCGCACCTGCAGCCCTCAATACTAAGGACCATAGGCTTTGTACTGTGTTTTACAGATTaGAAAGCTGACGTGACACAT | + |
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Preference number: 3 (lower is better) Translates to: GSCSPHLQPSILRTIGFVLCFTD*KADVTH Trigger: ATGTGTCACGTCAGCTTTCAAATCTGTAAAACACAG...TACAAAGCCTATGGTCCTTAGTATTGAGGGCTGCAGGTGCGGAGAGCAACTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR GCA 72 bp | TTTACAGATTTGAAAGCTGACGTGACACATTCTCAGTaGCATCAAGCACAGCTAGAAAGAGAGCTGCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: FTDLKADVTHSQ*HQAQLERELPG Trigger: GCCAGGCAGCTCTCTTTCTAGCTGTGCTTGATGGCACTGAGAATGTGTCACGTCAGCTTTCAAATCTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR CAA 90 bp | ACAGATGAGGAAAACAAAGCTTGGAGAAGTCAGGGGATTTGTCCCAAACTCACATCTGCTGCTTCTTCCTaGCTACAGTCAGGTAACTCA | + |
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Preference number: 3 (lower is better) Translates to: TDEENKAWRSQGICPKLTSAASS*LQSGNS Trigger: TGAGTTACCTGACTGTAGCAAGGAAGAAGCAGCAGA...TGTGAGTTTGGGACAAATCCCCTGACTTCTCCAAGCTTTGTTTTCCTCATCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR-3UTR CAA 90 bp | TACTCTTCTGAAGCCTGCTGCCTTAAGACACTGATGTGGGTGTCTATCACATACAAGACCTTCAAGAGCTaGGTTTTGGGGTCCTCTATT | + |
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Preference number: 3 (lower is better) Translates to: YSSEACCLKTLMWVSITYKTFKS*VLGSSI Trigger: AATAGAGGACCCCAAAACCAAGCTCTTGAAGGTCTT...GTATGTGATAGACACCCACATCAGTGTCTTAAGGCAGCAGGCTTCAGAAGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR TCA 72 bp | TTTGTCCCAAACTCACACAACAAGAGCATAGCACCCTaGCTCCAAAATCCGCAGAGAATCTTCATGGCTCAA | + |
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Preference number: 3 (lower is better) Translates to: FVPNSHNKSIAP*LQNPQRIFMAQ Trigger: TTGAGCCATGAAGATTCTCTGCGGATTTTGGAGTCAGGGTGCTATGCTCTTGTTGTGTGAGTTTGGGACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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| 3UTR TCA 72 bp | CTGGCCCATCAATACTTTCTGCGTTTGTTTACTGTTTaGTTAATCGAGGTAGGCTCTCCTGGAACTCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: LAHQYFLRLFTV*LIEVGSPGTHS Trigger: TGAGTGAGTTCCAGGAGAGCCTACCTCGATTAATCAAACAGTAAACAAACGCAGAAAGTATTGATGGGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| 3UTR TCA 72 bp | GGAGGTGGCTCTGATGTCTATAGAGACCTCCATACATaGCAAGAAGAAAACTCTAAGCACACACAAACATGT | + |
|
Preference number: 3 (lower is better) Translates to: GGGSDVYRDLHT*QEENSKHTQTC Trigger: ACATGTTTGTGTGTGCTTAGAGTTTTCTTCTTGTCATGTATGGAGGTCTCTATAGACATCAGAGCCACCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| 3UTR TCA 72 bp | GTAAGTATGTTACTTTTAAGTGGAACTCTATCCAGATaGCCTACCCACAAGATGACCACAATGCCCTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VSMLLLSGTLSR*PTHKMTTMPWH Trigger: ATGCCAGGGCATTGTGGTCATCTTGTGGGTAGGTCATCTGGATAGAGTTCCACTTAAAAGTAACATACTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| 3UTR TCA 72 bp | ACAGCAAATCGGATTGATAAACCCACAAAGACAAAATaGGTCTACTCTTCTGAAGCCTGCTGCCTTAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: TANRIDKPTKTK*VYSSEACCLKT Trigger: TGTCTTAAGGCAGCAGGCTTCAGAAGAGTAGACTCATTTTGTCTTTGTGGGTTTATCAATCCGATTTGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| 3UTR TCA 72 bp | GCAGAGAATCTTCATGGCTCAACCACTTGCTCTGGATaGCCAACAAAGGCTAGTTTATGGTTCTTAAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: AENLHGSTTCSG*PTKASLWFLKC Trigger: ACATTTTAAGAACCATAAACTAGCCTTTGTTGGTCATCCAGAGCAAGTGGTTGAGCCATGAAGATTCTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| 3UTR TCA 72 bp | ACTTATGTGGTGTCCCAAAGTTCACTGGAGAATTATTaGCTGAGATTAAAATGGTGGAGTCTCCATAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TYVVSQSSLENY*LRLKWWSLHKP Trigger: TGGCTTATGGAGACTCCACCATTTTAATCTCAGTCAATAATTCTCCAGTGAACTTTGGGACACCACATAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| 3UTR TCA 72 bp | AAGAAATTATCAACAACATGTAACATGTCTCAGAGATaGGTGGCAGGGACAGCAAATCGGATTGATAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: KKLSTTCNMSQR*VAGTANRIDKP Trigger: GGGTTTATCAATCCGATTTGCTGTCCCTGCCACTCATCTCTGAGACATGTTACATGTTGTTGATAATTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| 3UTR GCA 72 bp | CATCCACCACCACACCATCAGGTCTTTTGTAAATCATaGTTTTTGTACACTGGACTTAGTGACATAAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HPPPHHQVFCKS*FLYTGLSDIRK Trigger: CTTTCTTATGTCACTAAGTCCAGTGTACAAAAAGCATGATTTACAAAAGACCTGATGGTGTGGTGGTGGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| 3UTR TCA 72 bp | CACAAGATGACCACAATGCCCTGGCATAATTACTTGTaGAGTGATTGGTTCTCAGGAATCAAAACAAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: HKMTTMPWHNYL*SDWFSGIKTRN Trigger: ATTTCTTGTTTTGATTCCTGAGAACCAATCACTTCACAAGTAATTATGCCAGGGCATTGTGGTCATCTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| 3UTR CCA 72 bp | AAGGCTAGTTTATGGTTCTTAAAATGTTTCCTCACGTaGAACAGTACCATGGTAAGTATGTTACTTTTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KASLWFLKCFLT*NSTMVSMLLLS Trigger: ACTTAAAAGTAACATACTTACCATGGTACTGTTCCACGTGAGGAAACATTTTAAGAACCATAAACTAGCCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR CCA 90 bp | ATCCTGCCTCCACTTTCGGGCTACAGGCACCTGCCACCACACCAGACAGCACTTAGGCTTCGTGTGCCTTaGGCTGGGAAAAGGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILPPLSGYRHLPPHQTALRLRVP*AGKRKA Trigger: AGCTTTCCTTTTCCCAGCCCAAGGCACACGAAGCCT...AAGTGCTGTCTGGTGTGGTGGCAGGTGCCTGTAGCCCGAAAGTGGAGGCAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| 3UTR CAA 72 bp | CAGGTTGTTTGTTGTGGACTTGACGGCGGCAGGCAGTaGCTCTCCGCACCTGCAGCCCTCAATACTAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QVVCCGLDGGRQ*LSAPAALNTKD Trigger: GTCCTTAGTATTGAGGGCTGCAGGTGCGGAGAGCAACTGCCTGCCGCCGTCAAGTCCACAACAAACAACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR CCA 90 bp | TTTCGGGCTACAGGCACCTGCCACCACACCAGACAGCACTTGTGCTCTTACGTGGCTGCAGGGTCACATTaGTCTCTCCTGGGAAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRATGTCHHTRQHLCSYVAAGSH*SLLGKS Trigger: AGACTTTCCCAGGAGAGACCAATGTGACCCTGCAGC...CACGTAAGAGCACAAGTGCTGTCTGGTGTGGTGGCAGGTGCCTGTAGCCCGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR TCA 90 bp | ATCCTGCCTCCACTTTCGGGCTACAGGCACCTGCCACCACACCAGACAGCACTTCAGAAAACTGAGAAATaGCTTCTTCGCTTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILPPLSGYRHLPPHQTALQKTEK*LLRFSW Trigger: CCAGGAGAAGCGAAGAAGTCATTTCTCAGTTTTCTG...AAGTGCTGTCTGGTGTGGTGGCAGGTGCCTGTAGCCCGAAAGTGGAGGCAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR CCA 90 bp | TCAGTGCCATCAAGCACAGCTAGAAAGAGAGCTGCCTGGCCTTTGATGGGCAAACAGCCAGGGAGGTCTTaGTCACATTCACCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVPSSTARKRAAWPLMGKQPGRS*SHSPPA Trigger: TGCAGGTGGTGAATGTGACCAAGACCTCCCTGGCTG...TTTGCCCATCAAAGGCCAGGCAGCTCTCTTTCTAGCTGTGCTTGATGGCACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| 3UTR CAA 72 bp | CCATCAAGCACAGCTAGAAAGAGAGCTGCCTGGCCTTaGATGGGCAAATGGTGGCACCTCCATAGGTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PSSTARKRAAWP*MGKWWHLHRLV Trigger: TACCAACCTATGGAGGTGCCACCATTTGCCCATCAAAGGCCAGGCAGCTCTCTTTCTAGCTGTGCTTGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR TCA 90 bp | AGCACAATCCATTCTCCTGCCAAGTGCCTGCTGAAAGCCAAGCGCACAAAGGAGTGGGAAAAGGAAAGCTaGATGATGGCCAGAGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: STIHSPAKCLLKAKRTKEWEKES*MMARAK Trigger: CTTAGCTCTGGCCATCATTCAGCTTTCCTTTTCCCA...CTCCTTTGTGCGCTTGGCTTTCAGCAGGCACTTGGCAGGAGAATGGATTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR GCA 90 bp | AAAGAGCCTCCCCTGACATTGCAAAGCAGGACAGATGAGGGACCAGGTATCAGAAAACAAAAGGCCCAGTaGAGGAACCAGAAGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KEPPLTLQSRTDEGPGIRKQKAQ*RNQKPQ Trigger: TTGGGGCTTCTGGTTCCTGCACTGGGCCTTTTGTTT...TCTGATACCTGGTCCCTCATCTGTCCTGCTTTGCAATGTCAGGGGAGGCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR CCA 90 bp | ACTCAGCACAATCCATTCTCCTGCCAAGTGCCTGCTGAAAGCCAAGCGCACAAATCACGAGCAGGTAGCTaGAGTGAGGCTGTTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQHNPFSCQVPAESQAHKSRAGS*SEAVCL Trigger: AAGACAAACAGCCTCACTCCAGCTACCTGCTCGTGA...TTTGTGCGCTTGGCTTTCAGCAGGCACTTGGCAGGAGAATGGATTGTGCTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| 3UTR CAA 72 bp | TCCATGGGGCTCATTGCAGCCTCTGCTGCTTCTTCCTaGCTACAGTCAGGTAACTCAGCACAATCCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SMGLIAASAASS*LQSGNSAQSIL Trigger: GAGAATGGATTGTGCTGAGTTACCTGACTGTAGCAAGGAAGAAGCAGCAGAGGCTGCAATGAGCCCCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR GCA 90 bp | GAGTGTGTGGAGGTGGCTCTGATGTCTATAGAGACCTCCATACATGACAAGAAGTCAGACTCCCAGAGCTaGAGGGTCACATTGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ECVEVALMSIETSIHDKKSDSQS*RVTLVS Trigger: AGAGACCAATGTGACCCTGCAGCTCTGGGAGTCTGA...CTTCTTGTCATGTATGGAGGTCTCTATAGACATCAGAGCCACCTCCACACACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| 3UTR CAA 72 bp | GTTCCATTATGTAGCATAGGTTGGCTTCTGAAGTCTTaGAGCATCCTGCCTCCACTTTCGGGCTACAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VPLCSIGWLLKS*SILPPLSGYRH Trigger: GTGCCTGTAGCCCGAAAGTGGAGGCAGGATGCTCAAAGACTTCAGAAGCCAACCTATGCTACATAATGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR TCA 90 bp | GAGTGTGTGGAGGTGGCTCTGATGTCTATAGAGACCTCCATACATGACAAGAAGGAGGGCCAGGGACGTTaGTGTGCAAGTCATCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ECVEVALMSIETSIHDKKEGQGR*CASHQN Trigger: ATTTTGATGACTTGCACATCAACGTCCCTGGCCCTC...CTTCTTGTCATGTATGGAGGTCTCTATAGACATCAGAGCCACCTCCACACACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR TCA 90 bp | AGGAAAACAAAGCTTGGAGAAGTCAGGGGATTTGTCCCAAACTCACACAACAAGGGCAAGCCCAAAATCTaGGACAAGAGAAAGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RKTKLGEVRGFVPNSHNKGKPKI*DKRKPQ Trigger: CTGTGGCTTTCTCTTGTCTCAGATTTTGGGCTTGCC...CTTGTTGTGTGAGTTTGGGACAAATCCCCTGACTTCTCCAAGCTTTGTTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| 3UTR CAA 72 bp | ACCAACTCTCTTCTCCATAATTCACTTAGATACAGGTaGTTTGTTGTGGACTTGACGGCGGCAGGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TNSLLHNSLRYR*FVVDLTAAGSC Trigger: GCAACTGCCTGCCGCCGTCAAGTCCACAACAAACAACCTGTATCTAAGTGAATTATGGAGAAGAGAGTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR CCA 90 bp | GAGGAAAACAAAGCTTGGAGAAGTCAGGGGATTTGTCCCAAACTCACACAACAACACATTGGTCTCTCCTaGGAAAGTCTTCAGGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EENKAWRSQGICPKLTQQHIGLS*ESLQVD Trigger: GTCAACCTGAAGACTTTCCCAGGAGAGACCAATGTG...TTGTTGTGTGAGTTTGGGACAAATCCCCTGACTTCTCCAAGCTTTGTTTTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGTGGAGGTGGCTCTGATGTCTATAGAGACCTCCATACATGACAAGAAGGACACCAGTCGACATTaGCATAAGTATGAAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ECVEVALMSIETSIHDKKDTSRH*HKYEKK Trigger: CTTCTTTTCATACTTATGCCAATGTCGACTGGTGTC...CTTCTTGTCATGTATGGAGGTCTCTATAGACATCAGAGCCACCTCCACACACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| 3UTR CAA 72 bp | TGTCTCAGAGATGAGTGGCAGGGACAGCAAATCGGATaGATAAACCCACAAAGACAAAATGAGTCTACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLRDEWQGQQIG*INPQRQNESTL Trigger: AAGAGTAGACTCATTTTGTCTTTGTGGGTTTATCAATCCGATTTGCTGTCCCTGCCACTCATCTCTGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR TCA 90 bp | GGTGAGCTACTCAGGAGTAGAGTCTATCTCCATGTTATTCAATATGGTTTCATGCTCTTCCACACTGTTTaGAGCACCTGGAATTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: GELLRSRVYLHVIQYGFMLFHTV*STWNSI Trigger: GATTGAATTCCAGGTGCTTCAAACAGTGTGGAAGAG...CATGAAACCATATTGAATAACATGGAGATAGACTCTACTCCTGAGTAGCTCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR CCA 90 bp | GGTGAGCTACTCAGGAGTAGAGTCTATCTCCATGTTATTCAATATGGTTTCATGTTCTGTGCTAAGGGATaGCCTTCTCTTAGCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GELLRSRVYLHVIQYGFMFCAKG*PSLSLV Trigger: TACAAGGCTAAGAGAAGGCCATCCCTTAGCACAGAA...CATGAAACCATATTGAATAACATGGAGATAGACTCTACTCCTGAGTAGCTCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| 3UTR CAA 72 bp | CCACCACACCATCAGGTCTTTTGTAAATCATGCTTTTaGTACACTGGACTTAGTGACATAAGAAAGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPHHQVFCKSCF*YTGLSDIRKNR Trigger: TCTGTTCTTTCTTATGTCACTAAGTCCAGTGTACAAAAAGCATGATTTACAAAAGACCTGATGGTGTGGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR CAA 90 bp | ACTCAGCACAATCCATTCTCCTGCCAAGTGCCTGCTGAAAGCCAAGCGCACAAAACAGCCAGGGAGGTCTaGGTCACATTCACCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TQHNPFSCQVPAESQAHKTAREV*VTFTTC Trigger: GCAGGTGGTGAATGTGACCAAGACCTCCCTGGCTGT...TTTGTGCGCTTGGCTTTCAGCAGGCACTTGGCAGGAGAATGGATTGTGCTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR CAA 90 bp | TACTCTTCTGAAGCCTGCTGCCTTAAGACACTGATGTGGGTGTCTATCACATACAGCTATCGACATGGATaGGTGCCTGGAGGAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: YSSEACCLKTLMWVSITYSYRHG*VPGGGC Trigger: ACAGCCTCCTCCAGGCACCAATCCATGTCGATAGCT...GTATGTGATAGACACCCACATCAGTGTCTTAAGGCAGCAGGCTTCAGAAGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR CAA 90 bp | TCAGTGCCATCAAGCACAGCTAGAAAGAGAGCTGCCTGGCCTTTGATGGGCAAAACCTGGAATTCAATCTaGCAGCCAAAGGCACATTTA | + |
|
Preference number: 5 (lower is better) Translates to: SVPSSTARKRAAWPLMGKTWNSI*QPKAHL Trigger: TAAATGTGCCTTTGGCTGCAAGATTGAATTCCAGGT...TTTGCCCATCAAAGGCCAGGCAGCTCTCTTTCTAGCTGTGCTTGATGGCACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR CAA 90 bp | TACTCTTCTGAAGCCTGCTGCCTTAAGACACTGATGTGGGTGTCTATCACATACCTCTCTCTAAACAGATaGCTTTCGCAGGCATCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: YSSEACCLKTLMWVSITYLSLNR*LSQASC Trigger: ACAAGATGCCTGCGAAAGCAATCTGTTTAGAGAGAG...GTATGTGATAGACACCCACATCAGTGTCTTAAGGCAGCAGGCTTCAGAAGAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS-3UTR CAA 90 bp | TACTCTTCTGAAGCCTGCTGCCTTAAGACACTGATGTGGGTGTCTATCACATACTCTCTTCCACACTGTTaGAAGCACCTGGAATTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: YSSEACCLKTLMWVSITYSLPHC*KHLEFN Trigger: ATTGAATTCCAGGTGCTTCAAACAGTGTGGAAGAGA...GTATGTGATAGACACCCACATCAGTGTCTTAAGGCAGCAGGCTTCAGAAGAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS GCA 72 bp | GACAAGCAGGAAGATGGAGCTATCGACATGGATTGGTaGCTGGAGGAGGCTGTCGTCCGTCTGTCTGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: DKQEDGAIDMDW*LEEAVVRLSEH Trigger: GTGTTCAGACAGACGGACGACAGCCTCCTCCAGGCACCAATCCATGTCGATAGCTCCATCTTCCTGCTTGTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS GCA 72 bp | CATGGCTACTGTAAAGGGGGCTACGGAGGCTTCGTGTaGCTTGGGCTGGGAAAAGGAAAGCTGAATGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: HGYCKGGYGGFV*LGLGKGKLNDG Trigger: GCCATCATTCAGCTTTCCTTTTCCCAGCCCAAGGCACACGAAGCCTCCGTAGCCCCCTTTACAGTAGCCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS CCA 72 bp | AGCAGGAAGATGGAGCTATCGACATGGATTGGTGCCTaGAGGAGGCTGTCGTCCGTCTGTCTGAACACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SRKMELSTWIGA*RRLSSVCLNTL Trigger: GAGAGTGTTCAGACAGACGGACGACAGCCTCCTCCAGGCACCAATCCATGTCGATAGCTCCATCTTCCTGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS CAA 90 bp | CAGAGCTGCAGGGTCACATTGGTCTCTCCTGGGAAAGTCTTCAGGTaGACGGTAAAGTCTGTGACAGCCAGGGAGGTCTTGGTCACATTC | + |
|
Preference number: 6 (lower is better) Translates to: QSCRVTLVSPGKVFR*TVKSVTAREVLVTF Trigger: GAATGTGACCAAGACCTCCCTGGCTGTCACAGACTTTACCGTCAACCTGAAGACTTTCCCAGGAGAGACCAATGTGACCCTGCAGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS CCA 72 bp | ATCGATAAGACAAGCAGGAAGATGGAGCTATCGACATaGATTGGTGCCTGGAGGAGGCTGTCGTCCGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: IDKTSRKMELST*IGAWRRLSSVC Trigger: ACAGACGGACGACAGCCTCCTCCAGGCACCAATCCATGTCGATAGCTCCATCTTCCTGCTTGTCTTATCGAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS CAA 72 bp | AGGTTGACGGTAAAGTCTGTGACAGCCAGGGAGGTCTaGGTCACATTCACCACCTGCAGCACTTTAGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: RLTVKSVTAREV*VTFTTCSTLGS Trigger: GGATCCTAAAGTGCTGCAGGTGGTGAATGTGACCAAGACCTCCCTGGCTGTCACAGACTTTACCGTCAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS GCA 72 bp | TCAGAAACACTAGTCCCATCCGGAAAGCCAAGTAGATaGCCACGAACATTAAAGTCAAGCTCAGAGGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SETLVPSGKPSR*PRTLKSSSEAA Trigger: TGCGGCCTCTGAGCTTGACTTTAATGTTCGTGGGCATCTACTTGGCTTTCCGGATGGGACTAGTGTTTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
||
| CDS CCA 72 bp | TATTTAAAAGGATCATCGATAAGACAAGCAGGAAGATaGAGCTATCGACATGGATTGGTGCCTGGAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: YLKGSSIRQAGR*SYRHGLVPGGG Trigger: GCCTCCTCCAGGCACCAATCCATGTCGATAGCTCCATCTTCCTGCTTGTCTTATCGATGATCCTTTTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078748.4 |
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