Pregenerated sensors for SLC10A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029219Ensembl transcript IDs: ENSMUST00000031127.11, ENSMUST00000201304.2
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGAACGTCACAAATAGGAAGTaGTGTTTCAGCTCCCGTGTA | + |
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Preference number: 2 (lower is better) Translates to: EEQICYRKCQPIFIPDANVTNRK*CFSSRV Trigger: TACACGGGAGCTGAAACATCACTTCCTATTTGTGAC...GTTCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| 3UTR-3UTR TCA 90 bp | TTTACAAACATTTACAAACATTTCCAACCCCATTTCCTATCTGTAGCGATGCTGGTCACAAATAGGAAGTaGTGTTTCAGCTCCCGTGTA | + |
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Preference number: 2 (lower is better) Translates to: FTNIYKHFQPHFLSVAMLVTNRK*CFSSRV Trigger: TACACGGGAGCTGAAACATCACTTCCTATTTGTGAC...CAGCATCGCTACAGATAGGAAATGGGGTTGGAAATGTTTGTAAATGTTTGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| 3UTR-3UTR TCA 90 bp | TTTACAAACATTTACAAACATTTCCAACCCCATTTCCTATCTGTAGCGATGCTGATACTGGGACTCTGTTaGGTTAGAAAAACACATGGG | + |
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Preference number: 2 (lower is better) Translates to: FTNIYKHFQPHFLSVAMLILGLC*VRKTHG Trigger: CCCATGTGTTTTTCTAACTCAACAGAGTCCCAGTAT...CAGCATCGCTACAGATAGGAAATGGGGTTGGAAATGTTTGTAAATGTTTGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| 3UTR CCA 72 bp | ATCTTTATCCCGGATGCGAACCATACTCGCTACCAATaGTCACAAATAGGAAGTGATGTTTCAGCTCCCGTG | + |
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Preference number: 3 (lower is better) Translates to: IFIPDANHTRYQ*SQIGSDVSAPV Trigger: CACGGGAGCTGAAACATCACTTCCTATTTGTGACCATTGGTAGCGAGTATGGTTCGCATCCGGGATAAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| 3UTR GCA 72 bp | GATTTTCTCTGGCTTGAGAGTGGTTTGACGATGCAATaGTATCCTGTCGTTTCACTGACCCGTTTTGGACTT | + |
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Preference number: 3 (lower is better) Translates to: DFLWLESGLTMQ*YPVVSLTRFGL Trigger: AAGTCCAAAACGGGTCAGTGAAACGACAGGATAGCATTGCATCGTCAAACCACTCTCAAGCCAGAGAAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR GCA 90 bp | TTACAGTGGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGACGGGCCGCCGGACGTaGGCCCCGAAGTGGTTCACG | + |
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Preference number: 4 (lower is better) Translates to: LQWEEQICYRKCQPIFIPTGRRT*APKWFT Trigger: CGTGAACCACTTCGGGGCGCACGTCCGGCGGCCCGT...CGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCCACTGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS-3UTR CCA 90 bp | GAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGAACAAAGCGGAGGAGCCCTaGCCAGCCACGCCGACCGTG | + |
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Preference number: 4 (lower is better) Translates to: EEQICYRKCQPIFIPDANKAEEP*PATPTV Trigger: CACGGTCGGCGTGGCTGGCCAGGGCTCCTCCGCTTT...GTTCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS-3UTR CCA 90 bp | TTACAGTGGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGCAGAATGGGGGCTCGTaGGGGATCCAGGGCCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: LQWEEQICYRKCQPIFIPQNGGS*GIQGRG Trigger: CCCCCGGCCCTGGATCCCCCACGAGCCCCCATTCTG...CGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCCACTGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS-3UTR TCA 90 bp | GGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGACGTTGGGAGACAGGGTaGGGTTGTCAGGCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: GKSKSVTGNVNPSLSRMRRWETG*GCQAAA Trigger: CGCTGCTGCCTGACAACCTCACCCTGTCTCCCAACG...TCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS-3UTR TCA 90 bp | GGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGACTAGACCCAGCATGGTaGTGCACAAGGCGGCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GKSKSVTGNVNPSLSRMRLDPAW*CTRRRP Trigger: TGGGCGCCGCCTTGTGCATCACCATGCTGGGTCTAG...TCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS-3UTR CCA 90 bp | GAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGAACCGGCGTGTCCCAGAATaGGGGCTCGTGGGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: EEQICYRKCQPIFIPDANRRVPE*GLVGDP Trigger: TGGATCCCCCACGAGCCCCCATTCTGGGACACGCCG...GTTCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS-3UTR TCA 90 bp | GGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGACATTCAGCCCGTGGTTaGGCGGCGTGTCCCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: GKSKSVTGNVNPSLSRMRHSARG*AACPRM Trigger: CATTCTGGGACACGCCGCTCAACCACGGGCTGAATG...TCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS-3UTR CCA 90 bp | GGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGAGGCAAGAAGCCGAACTaGCAGAGCGCAGCCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GKSKSVTGNVNPSLSRMRGKKPN*QSAASR Trigger: TCTGCTGGCTGCGCTCTGCCAGTTCGGCTTCTTGCC...TCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS-3UTR TCA 90 bp | GGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGAGCGGGAAGGCCAGTTTaGGAATCGCAGTGCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GKSKSVTGNVNPSLSRMRAGRPV*ESQCRA Trigger: AGCTCTGCACTGCGATTCTCAAACTGGCCTTCCCGC...TCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR CCA 90 bp | TTTACAAACATTTACAAACATTTCCAACCCCATTTCCTATCTGTAGCGATGCTGGAGGCGAAAGGGTGCTaGCGCTCGGGCTGCCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: FTNIYKHFQPHFLSVAMLEAKGC*RSGCRR Trigger: ACGCCGGCAGCCCGAGCGCCAGCACCCTTTCGCCTC...CAGCATCGCTACAGATAGGAAATGGGGTTGGAAATGTTTGTAAATGTTTGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS-3UTR CCA 90 bp | TTACAGTGGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGCAGTCCGCTTGCAGTTaGGCGGGAGGTGGAAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: LQWEEQICYRKCQPIFIPQSACS*AGGGRG Trigger: CCCTCTTCCACCTCCCGCCCAACTGCAAGCGGACTG...CGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCCACTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR CCA 90 bp | GAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGAACCAGTTGGGCGGGAGGTaGAAGAGGGTAGCTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EEQICYRKCQPIFIPDANQLGGR*KRVAKP Trigger: TGGCTTAGCTACCCTCTTCCACCTCCCGCCCAACTG...GTTCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR TCA 90 bp | GGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGACAGAGCTGCACGTTCTaGCTTCCTGTTTCCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: GKSKSVTGNVNPSLSRMRQSCTF*LPVSRH Trigger: GTGTCTGGAAACAGGAAGTCAGAACGTGCAGCTCTG...TCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR CCA 90 bp | GATACAACATTACAGTGGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCACGTGCGCCCCGAAGTaGTTCACGTCCACGGTACAG | + |
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Preference number: 4 (lower is better) Translates to: DTTLQWEEQICYRKCQPITCAPK*FTSTVQ Trigger: CTGTACCGTGGACGTGAACCACTTCGGGGCGCACGT...GATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCCACTGTAATGTTGTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS-3UTR CCA 90 bp | GGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGAAGAGGGCGGTCTGGGTaGTCTCCATCATCACTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKSKSVTGNVNPSLSRMRRGRSG*SPSSLS Trigger: ACTTAGTGATGATGGAGACCACCCAGACCGCCCTCT...TCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR CCA 90 bp | GATACAACATTACAGTGGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCAACACATTCAGCCCGTaGTTGAGCGGCGTGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: DTTLQWEEQICYRKCQPINTFSP*LSGVSQ Trigger: CTGGGACACGCCGCTCAACCACGGGCTGAATGTGTT...GATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCCACTGTAATGTTGTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS-3UTR CCA 90 bp | ATACTGAGATACAACATTACAGTGGGAAGAGCAAATCTGTTACAGGAAATGTCACAGTCCGCTTGCAGTTaGGCGGGAGGTGGAAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: ILRYNITVGRANLLQEMSQSACS*AGGGRG Trigger: CCCTCTTCCACCTCCCGCCCAACTGCAAGCGGACTG...TGACATTTCCTGTAACAGATTTGCTCTTCCCACTGTAATGTTGTATCTCAGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR TCA 90 bp | GAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGAACCTACCAGCAGGGACATaGGATTGGAGAGATTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: EEQICYRKCQPIFIPDANLPAGT*DWRDFH Trigger: GTGGAAATCTCTCCAATCTCATGTCCCTGCTGGTAG...GTTCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS-3UTR GCA 90 bp | GAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGAACAAACAGTTGCGGGAATaGTTGCCAGCAGTTCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: EEQICYRKCQPIFIPDANKQLRE*LPAVQV Trigger: GACCTGAACTGCTGGCAAGCATTCCCGCAACTGTTT...GTTCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR TCA 90 bp | GAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGAACTGGTGCCAGTCATTATaGAAAGAACCACCAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: EEQICYRKCQPIFIPDANWCQSL*KEPPGS Trigger: TGACCCTGGTGGTTCTTTTCATAATGACTGGCACCA...GTTCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR TCA 90 bp | TTTACAAACATTTACAAACATTTCCAACCCCATTTCCTATCTGTAGCGATGCTGGCGGGAAGGCCAGTTTaGGAATCGCAGTGCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: FTNIYKHFQPHFLSVAMLAGRPV*ESQCRA Trigger: AGCTCTGCACTGCGATTCTCAAACTGGCCTTCCCGC...CAGCATCGCTACAGATAGGAAATGGGGTTGGAAATGTTTGTAAATGTTTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR GCA 90 bp | GATACAACATTACAGTGGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCGACCACGTAAACAGTTaGGGGAATGCTTGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: DTTLQWEEQICYRKCQPIDHVNS*GNACQQ Trigger: CTGCTGGCAAGCATTCCCGCAACTGTTTACGTGGTC...GATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCCACTGTAATGTTGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR CCA 90 bp | TTTACAAACATTTACAAACATTTCCAACCCCATTTCCTATCTGTAGCGATGCTGCAGTTGGGCGGGAGGTaGAAGAGGGTAGCTAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FTNIYKHFQPHFLSVAMLQLGGR*KRVAKP Trigger: TGGCTTAGCTACCCTCTTCCACCTCCCGCCCAACTG...CAGCATCGCTACAGATAGGAAATGGGGTTGGAAATGTTTGTAAATGTTTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR GCA 90 bp | TTACAGTGGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGCCATAGGAGGTGTCTaGCATTTCCTCTTCTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: LQWEEQICYRKCQPIFIPAIGGV*HFLFFQ Trigger: CTGAAAGAAGAGGAAATGGCAGACACCTCCTATGGC...CGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCCACTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR TCA 90 bp | ATACTGAGATACAACATTACAGTGGGAAGAGCAAATCTGTTACAGGAAATGTCACAGAGCTGCACGTTCTaGCTTCCTGTTTCCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: ILRYNITVGRANLLQEMSQSCTF*LPVSRH Trigger: GTGTCTGGAAACAGGAAGTCAGAACGTGCAGCTCTG...TGACATTTCCTGTAACAGATTTGCTCTTCCCACTGTAATGTTGTATCTCAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR GCA 90 bp | TTTACAAACATTTACAAACATTTCCAACCCCATTTCCTATCTGTAGCGATGCTGGACCACGTAAACAGTTaGGGGAATGCTTGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: FTNIYKHFQPHFLSVAMLDHVNS*GNACQQ Trigger: CTGCTGGCAAGCATTCCCGCAACTGTTTACGTGGTC...CAGCATCGCTACAGATAGGAAATGGGGTTGGAAATGTTTGTAAATGTTTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR CCA 90 bp | ATACTGAGATACAACATTACAGTGGGAAGAGCAAATCTGTTACAGGAAATGTCAAGAGGGCGGTCTGGGTaGTCTCCATCATCACTAAGT | + |
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Preference number: 4 (lower is better) Translates to: ILRYNITVGRANLLQEMSRGRSG*SPSSLS Trigger: ACTTAGTGATGATGGAGACCACCCAGACCGCCCTCT...TGACATTTCCTGTAACAGATTTGCTCTTCCCACTGTAATGTTGTATCTCAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR GCA 90 bp | TTTACAAACATTTACAAACATTTCCAACCCCATTTCCTATCTGTAGCGATGCTGAAACAGTTGCGGGAATaGTTGCCAGCAGTTCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: FTNIYKHFQPHFLSVAMLKQLRE*LPAVQV Trigger: GACCTGAACTGCTGGCAAGCATTCCCGCAACTGTTT...CAGCATCGCTACAGATAGGAAATGGGGTTGGAAATGTTTGTAAATGTTTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR GCA 90 bp | ATACTGAGATACAACATTACAGTGGGAAGAGCAAATCTGTTACAGGAAATGTCAGCCATAGGAGGTGTCTaGCATTTCCTCTTCTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: ILRYNITVGRANLLQEMSAIGGV*HFLFFQ Trigger: CTGAAAGAAGAGGAAATGGCAGACACCTCCTATGGC...TGACATTTCCTGTAACAGATTTGCTCTTCCCACTGTAATGTTGTATCTCAGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS GCA 90 bp | AACTGGCAGAGCGCAGCCAGCAGAGCGCCCACGGGCCGCCGGACGTaGGCCCCGAAGTGGTTCACGTCCACGGTACAGCCTAGACCCAGC | + |
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Preference number: 5 (lower is better) Translates to: NWQSAASRAPTGRRT*APKWFTSTVQPRPS Trigger: GCTGGGTCTAGGCTGTACCGTGGACGTGAACCACTTCGGGGCGCACGTCCGGCGGCCCGTGGGCGCTCTGCTGGCTGCGCTCTGCCAGTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS CCA 90 bp | GCCCTGGCCAGCCACGCCGACCGTGAGGCTGCTGCTCGTGGGCTCTaGAGTCGGGGTTGCCTCGGGGCTAAAGCCGATGCTTGGACTTGG | + |
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Preference number: 5 (lower is better) Translates to: ALASHADREAAARGL*SRGCLGAKADAWTW Trigger: CCAAGTCCAAGCATCGGCTTTAGCCCCGAGGCAACCCCGACTCCAGAGCCCACGAGCAGCAGCCTCACGGTCGGCGTGGCTGGCCAGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS CCA 90 bp | GCAGCCAGCAGAGCGCCCACGGGCCGCCGGACGTGCGCCCCGAAGTaGTTCACGTCCACGGTACAGCCTAGACCCAGCATGGTGATGCAC | + |
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Preference number: 5 (lower is better) Translates to: AASRAPTGRRTCAPK*FTSTVQPRPSMVMH Trigger: GTGCATCACCATGCTGGGTCTAGGCTGTACCGTGGACGTGAACCACTTCGGGGCGCACGTCCGGCGGCCCGTGGGCGCTCTGCTGGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS CCA 90 bp | AAGATGAGGGCCAGCAAGAAGGCTAGCAGCGGCAAGAAGCCGAACTaGCAGAGCGCAGCCAGCAGAGCGCCCACGGGCCGCCGGACGTGC | + |
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Preference number: 5 (lower is better) Translates to: KMRASKKASSGKKPN*QSAASRAPTGRRTC Trigger: GCACGTCCGGCGGCCCGTGGGCGCTCTGCTGGCTGCGCTCTGCCAGTTCGGCTTCTTGCCGCTGCTAGCCTTCTTGCTGGCCCTCATCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS CCA 90 bp | AGCATGGTGATGCACAAGGCGGCGCCCACAAACACATTCAGCCCGTaGTTGAGCGGCGTGTCCCAGAATGGGGGCTCGTGGGGGATCCAG | + |
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Preference number: 5 (lower is better) Translates to: SMVMHKAAPTNTFSP*LSGVSQNGGSWGIQ Trigger: CTGGATCCCCCACGAGCCCCCATTCTGGGACACGCCGCTCAACCACGGGCTGAATGTGTTTGTGGGCGCCGCCTTGTGCATCACCATGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS TCA 90 bp | GGCGGGAAGGCCAGTTTGAGAATCGCAGTGCAGAGCTGCACGTTCTaGCTTCCTGTTTCCAGACACACAGTCCGCTTGCAGTTGGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: GGKASLRIAVQSCTF*LPVSRHTVRLQLGG Trigger: CCCGCCCAACTGCAAGCGGACTGTGTGTCTGGAAACAGGAAGTCAGAACGTGCAGCTCTGCACTGCGATTCTCAAACTGGCCTTCCCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS GCA 90 bp | GGCGTAGCCCGCCAGAGGCATAAAAATGGCGACCACGTAAACAGTTaGGGGAATGCTTGCCAGCAGTTCAGGTCCCAGCATGGTGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: GVARQRHKNGDHVNS*GNACQQFRSQHGAS Trigger: ACTGGCACCATGCTGGGACCTGAACTGCTGGCAAGCATTCCCGCAACTGTTTACGTGGTCGCCATTTTTATGCCTCTGGCGGGCTACGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS TCA 90 bp | GAATGCTTGCCAGCAGTTCAGGTCCCAGCATGGTGCCAGTCATTATaGAAAGAACCACCAGGGTCACAAGCAGAGACCACAGGGAAACCT | + |
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Preference number: 5 (lower is better) Translates to: ECLPAVQVPAWCQSL*KEPPGSQAETTGKP Trigger: AGGTTTCCCTGTGGTCTCTGCTTGTGACCCTGGTGGTTCTTTTCATAATGACTGGCACCATGCTGGGACCTGAACTGCTGGCAAGCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR CAA 90 bp | GAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGAACACAGTCCGCTTGCAGTaGGGCGGGAGGTGGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: EEQICYRKCQPIFIPDANTVRLQ*GGRWKR Trigger: CCTCTTCCACCTCCCGCCCAACTGCAAGCGGACTGT...GTTCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS GCA 90 bp | CGGTCTGGGTGGTCTCCATCATCACTAAGTCATCCGTCCCCACGGTaGCATAGGAGGTGTCTGCCATTTCCTCTTCTTTCAGTTTCTTAT | + |
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Preference number: 5 (lower is better) Translates to: RSGWSPSSLSHPSPR*HRRCLPFPLLSVSY Trigger: ATAAGAAACTGAAAGAAGAGGAAATGGCAGACACCTCCTATGGCACCGTGGGGACGGATGACTTAGTGATGATGGAGACCACCCAGACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR CAA 90 bp | GGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGAACATTCAGCCCGTGGTaGAGCGGCGTGTCCCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: GKSKSVTGNVNPSLSRMRTFSPW*SGVSQN Trigger: ATTCTGGGACACGCCGCTCAACCACGGGCTGAATGT...TCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS GCA 90 bp | CAGAGGCATAAAAATGGCGACCACGTAAACAGTTGCGGGAATGCTTaGCAGCAGTTCAGGTCCCAGCATGGTGCCAGTCATTATGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: QRHKNGDHVNSCGNA*QQFRSQHGASHYEK Trigger: CTTTTCATAATGACTGGCACCATGCTGGGACCTGAACTGCTGGCAAGCATTCCCGCAACTGTTTACGTGGTCGCCATTTTTATGCCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR CAA 90 bp | GAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCTTTATCCCGGATGCGAACCAGTTGCGGGAATGCTaGCCAGCAGTTCAGGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: EEQICYRKCQPIFIPDANQLREC*PAVQVP Trigger: TGGGACCTGAACTGCTGGCAAGCATTCCCGCAACTG...GTTCGCATCCGGGATAAAGATGGGTTGACATTTCCTGTAACAGATTTGCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR CAA 90 bp | GATACAACATTACAGTGGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCGCCACCTCATCCAGCTaGAAGATGAGGGCCAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: DTTLQWEEQICYRKCQPIATSSS*KMRASK Trigger: CTTGCTGGCCCTCATCTTCAAGCTGGATGAGGTGGC...GATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCCACTGTAATGTTGTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS-3UTR CAA 90 bp | GATACAACATTACAGTGGGAAGAGCAAATCTGTTACAGGAAATGTCAACCCATCCAGTTGCGGGAATGCTaGCCAGCAGTTCAGGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: DTTLQWEEQICYRKCQPIQLREC*PAVQVP Trigger: TGGGACCTGAACTGCTGGCAAGCATTCCCGCAACTG...GATGGGTTGACATTTCCTGTAACAGATTTGCTCTTCCCACTGTAATGTTGTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR CAA 90 bp | ATACTGAGATACAACATTACAGTGGGAAGAGCAAATCTGTTACAGGAAATGTCAACAGTCCGCTTGCAGTaGGGCGGGAGGTGGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: ILRYNITVGRANLLQEMSTVRLQ*GGRWKR Trigger: CCTCTTCCACCTCCCGCCCAACTGCAAGCGGACTGT...TGACATTTCCTGTAACAGATTTGCTCTTCCCACTGTAATGTTGTATCTCAGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS-3UTR CAA 90 bp | ATACTGAGATACAACATTACAGTGGGAAGAGCAAATCTGTTACAGGAAATGTCAAGCAGGGACATGAGATaGGAGAGATTTCCACCAGGA | + |
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Preference number: 5 (lower is better) Translates to: ILRYNITVGRANLLQEMSSRDMR*ERFPPG Trigger: TCCTGGTGGAAATCTCTCCAATCTCATGTCCCTGCT...TGACATTTCCTGTAACAGATTTGCTCTTCCCACTGTAATGTTGTATCTCAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS CCA 72 bp | TGGGGGATCCAGGGCCGGGGGAAAGCGGAGGAGCCCTaGCCAGCCACGCCGACCGTGAGGCTGCTGCTCGTG | + |
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Preference number: 6 (lower is better) Translates to: WGIQGRGKAEEP*PATPTVRLLLV Trigger: CACGAGCAGCAGCCTCACGGTCGGCGTGGCTGGCCAGGGCTCCTCCGCTTTCCCCCGGCCCTGGATCCCCCA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS GCA 72 bp | AGCGCAGCCAGCAGAGCGCCCACGGGCCGCCGGACGTaGGCCCCGAAGTGGTTCACGTCCACGGTACAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SAASRAPTGRRT*APKWFTSTVQP Trigger: AGGCTGTACCGTGGACGTGAACCACTTCGGGGCGCACGTCCGGCGGCCCGTGGGCGCTCTGCTGGCTGCGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS TCA 72 bp | GGAAAGCGGAGGAGCCCTGGCCAGCCACGCCGACCGTaGGGCTGCTGCTCGTGGGCTCTGGAGTCGGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: GKRRSPGQPRRP*GCCSWALESGL Trigger: CAACCCCGACTCCAGAGCCCACGAGCAGCAGCCTCACGGTCGGCGTGGCTGGCCAGGGCTCCTCCGCTTTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS CAA 90 bp | GTGACAGCGAGAGGCGAAAGGGTGCTGGCGCTCGGGCTGCCGGCGTaGGGAGACAGGGTGAGGTTGTCAGGCAGCAGCGAGGACGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: VTARGERVLALGLPA*GDRVRLSGSSEDGA Trigger: TGCCCCGTCCTCGCTGCTGCCTGACAACCTCACCCTGTCTCCCAACGCCGGCAGCCCGAGCGCCAGCACCCTTTCGCCTCTCGCTGTCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS TCA 72 bp | TGCTGGCGCTCGGGCTGCCGGCGTTGGGAGACAGGGTaGGGTTGTCAGGCAGCAGCGAGGACGGGGCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: CWRSGCRRWETG*GCQAAARTGQG Trigger: TCCTTGCCCCGTCCTCGCTGCTGCCTGACAACCTCACCCTGTCTCCCAACGCCGGCAGCCCGAGCGCCAGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS CCA 72 bp | AGAGCGCCCACGGGCCGCCGGACGTGCGCCCCGAAGTaGTTCACGTCCACGGTACAGCCTAGACCCAGCATG | + |
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Preference number: 6 (lower is better) Translates to: RAPTGRRTCAPK*FTSTVQPRPSM Trigger: CATGCTGGGTCTAGGCTGTACCGTGGACGTGAACCACTTCGGGGCGCACGTCCGGCGGCCCGTGGGCGCTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS CCA 72 bp | GCCAGCAAGAAGGCTAGCAGCGGCAAGAAGCCGAACTaGCAGAGCGCAGCCAGCAGAGCGCCCACGGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: ASKKASSGKKPN*QSAASRAPTGR Trigger: GCGGCCCGTGGGCGCTCTGCTGGCTGCGCTCTGCCAGTTCGGCTTCTTGCCGCTGCTAGCCTTCTTGCTGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS CCA 72 bp | AGCCACGCCGACCGTGAGGCTGCTGCTCGTGGGCTCTaGAGTCGGGGTTGCCTCGGGGCTAAAGCCGATGCT | + |
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Preference number: 6 (lower is better) Translates to: SHADREAAARGL*SRGCLGAKADA Trigger: AGCATCGGCTTTAGCCCCGAGGCAACCCCGACTCCAGAGCCCACGAGCAGCAGCCTCACGGTCGGCGTGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS CAA 72 bp | AGAGGCGAAAGGGTGCTGGCGCTCGGGCTGCCGGCGTaGGGAGACAGGGTGAGGTTGTCAGGCAGCAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: RGERVLALGLPA*GDRVRLSGSSE Trigger: CTCGCTGCTGCCTGACAACCTCACCCTGTCTCCCAACGCCGGCAGCCCGAGCGCCAGCACCCTTTCGCCTCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS CAA 72 bp | CACAAGGCGGCGCCCACAAACACATTCAGCCCGTGGTaGAGCGGCGTGTCCCAGAATGGGGGCTCGTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: HKAAPTNTFSPW*SGVSQNGGSWG Trigger: CCCCCACGAGCCCCCATTCTGGGACACGCCGCTCAACCACGGGCTGAATGTGTTTGTGGGCGCCGCCTTGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS TCA 72 bp | ACAAGGCGGCGCCCACAAACACATTCAGCCCGTGGTTaGGCGGCGTGTCCCAGAATGGGGGCTCGTGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: TRRRPQTHSARG*AACPRMGARGG Trigger: TCCCCCACGAGCCCCCATTCTGGGACACGCCGCTCAACCACGGGCTGAATGTGTTTGTGGGCGCCGCCTTGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS CAA 90 bp | ATGGTGATGCACAAGGCGGCGCCCACAAACACATTCAGCCCGTGGTaGAGCGGCGTGTCCCAGAATGGGGGCTCGTGGGGGATCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: MVMHKAAPTNTFSPW*SGVSQNGGSWGIQG Trigger: GCCCTGGATCCCCCACGAGCCCCCATTCTGGGACACGCCGCTCAACCACGGGCTGAATGTGTTTGTGGGCGCCGCCTTGTGCATCACCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS CAA 90 bp | CAGCAGCCACATAGGAGTACAGCCACCGCGGCCACCTCATCCAGCTaGAAGATGAGGGCCAGCAAGAAGGCTAGCAGCGGCAAGAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: QQPHRSTATAATSSS*KMRASKKASSGKKP Trigger: CGGCTTCTTGCCGCTGCTAGCCTTCTTGCTGGCCCTCATCTTCAAGCTGGATGAGGTGGCCGCGGTGGCTGTACTCCTATGTGGCTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS CAA 72 bp | CATAGGAGTACAGCCACCGCGGCCACCTCATCCAGCTaGAAGATGAGGGCCAGCAAGAAGGCTAGCAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: HRSTATAATSSS*KMRASKKASSG Trigger: GCCGCTGCTAGCCTTCTTGCTGGCCCTCATCTTCAAGCTGGATGAGGTGGCCGCGGTGGCTGTACTCCTATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS TCA 72 bp | GGTTCACGTCCACGGTACAGCCTAGACCCAGCATGGTaGTGCACAAGGCGGCGCCCACAAACACATTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GSRPRYSLDPAW*CTRRRPQTHSA Trigger: GGCTGAATGTGTTTGTGGGCGCCGCCTTGTGCATCACCATGCTGGGTCTAGGCTGTACCGTGGACGTGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS TCA 72 bp | GCCAGTTTGAGAATCGCAGTGCAGAGCTGCACGTTCTaGCTTCCTGTTTCCAGACACACAGTCCGCTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: ASLRIAVQSCTF*LPVSRHTVRLQ Trigger: CTGCAAGCGGACTGTGTGTCTGGAAACAGGAAGTCAGAACGTGCAGCTCTGCACTGCGATTCTCAAACTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS GCA 72 bp | CGCCAGAGGCATAAAAATGGCGACCACGTAAACAGTTaGGGGAATGCTTGCCAGCAGTTCAGGTCCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: RQRHKNGDHVNS*GNACQQFRSQH Trigger: ATGCTGGGACCTGAACTGCTGGCAAGCATTCCCGCAACTGTTTACGTGGTCGCCATTTTTATGCCTCTGGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS GCA 72 bp | ACTTCCGTACATTTTGTAGATCAACACGAAGACCCCTaGCTCGGCAGACTGGAAGAGGGCGTAGAGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: TSVHFVDQHEDP*LGRLEEGVEQR Trigger: CCTCTGCTCTACGCCCTCTTCCAGTCTGCCGAGGCAGGGGTCTTCGTGTTGATCTACAAAATGTACGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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| CDS CAA 90 bp | ATGATGCTGAGGTTCATGTCGCCGTCTACCAGCAGGGACATGAGATaGGAGAGATTTCCACCAGGACAGCAGCCACATAGGAGTACAGCC | + |
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Preference number: 6 (lower is better) Translates to: MMLRFMSPSTSRDMR*ERFPPGQQPHRSTA Trigger: GGCTGTACTCCTATGTGGCTGCTGTCCTGGTGGAAATCTCTCCAATCTCATGTCCCTGCTGGTAGACGGCGACATGAACCTCAGCATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031127.11 |
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| CDS GCA 72 bp | TGGTCTCCATCATCACTAAGTCATCCGTCCCCACGGTaGCATAGGAGGTGTCTGCCATTTCCTCTTCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: WSPSSLSHPSPR*HRRCLPFPLLS Trigger: TGAAAGAAGAGGAAATGGCAGACACCTCCTATGGCACCGTGGGGACGGATGACTTAGTGATGATGGAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031127.11 ENSMUST00000201304.2 |
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