Pregenerated sensors for SLC10A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023073Ensembl transcript IDs: ENSMUST00000023835.3
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACATTCTGAGTTCAACTTTCTGCTTTTGTCTAGTGATGGAAAAATaGTCCAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: DILSSTFCFCLVMEK*SKCVCVCVCVCVCL Trigger: CAGACACACACACACACACACACACACACACACACATTTGGAGCATTTTTCCATCACTAGACAAAAGCAGAAAGTTGAACTCAGAATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR TCA 90 bp | ATTATGTCATTTTCTAGACTGATACCATTGTTCCTTTGTAACTTCTaGTACCTCCTGCTCATGGTGACTGGTATGGCACTTCATATGGGC | + |
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Preference number: 1 (lower is better) Translates to: IMSFSRLIPLFLCNF*YLLLMVTGMALHMG Trigger: GCCCATATGAAGTGCCATACCAGTCACCATGAGCAGGAGGTATCAGAAGTTACAAAGGAACAATGGTATCAGTCTAGAAAATGACATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR TCA 90 bp | ATCAAGGAATATCTTGTGACCAATCTGACTATGAATACAGAAAACTaGCTCATGTACGATCGTACGCTCATGTACACACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: IKEYLVTNLTMNTEN*LMYDRTLMYTHTHT Trigger: TGTGTGTGTGTGTGTGTACATGAGCGTACGATCGTACATGAGTCAGTTTTCTGTATTCATAGTCAGATTGGTCACAAGATATTCCTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR-3UTR TCA 90 bp | GACTGTGACAATATCTCCAGCCAAAATATTTTAAGTCTACAACCAGAAGCCCTCTTCCTTTGTAACTTCTaGTACCTCCTGCTCATGGTG | + |
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Preference number: 2 (lower is better) Translates to: DCDNISSQNILSLQPEALFLCNF*YLLLMV Trigger: CACCATGAGCAGGAGGTATCAGAAGTTACAAAGGAA...GAGGGCTTCTGGTTGTAGACTTAAAATATTTTGGCTGGAGATATTGTCACAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTCTAGTGATGGAAAAATGCTCCAAATGTGTGTGTGTGTGTGTGTGTGTGTGGCTCTTATCCTCCTaGTTTCTTCTTTCTAGTACT | + |
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Preference number: 2 (lower is better) Translates to: FCLVMEKCSKCVCVCVCVWLLSS*FLLSST Trigger: AGTACTAGAAAGAAGAAACCAGGAGGATAAGAGCCA...CACACACACACACACACACACACATTTGGAGCATTTTTCCATCACTAGACAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTCTAGTGATGGAAAAATGCTCCAAATGTGTGTGTGTGTGTGTGTGTGTGGCCATACAGTCTTGCTaGTTTATAAGTCTTATTTGG | + |
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Preference number: 2 (lower is better) Translates to: FCLVMEKCSKCVCVCVCVAIQSC*FISLIW Trigger: CCAAATAAGACTTATAAATCAGCAAGACTGTATGGC...CACACACACACACACACACACACATTTGGAGCATTTTTCCATCACTAGACAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTCTAGTACTGGGATTACAGCTGCACAGTATCATACCTGGCATTTTTATATCAAATCTCACTTTCTaGCATGAATCTTCCTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: FFLVLGLQLHSIIPGIFISNLTF*HESSCS Trigger: GCTACAGGAAGATTCATGTCAGAAAGTGAGATTTGA...TATAAAAATGCCAGGTATGATACTGTGCAGCTGTAATCCCAGTACTAGAAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR-3UTR CCA 90 bp | TTCCATCCCTATGACAGCCATACAGTCTTGCTGATTTATAAGTCTTATTTGGTTACACACACATATCTTTaGATCTTTGTCACACTAAAG | + |
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Preference number: 2 (lower is better) Translates to: FHPYDSHTVLLIYKSYLVTHTYL*IFVTLK Trigger: CTTTAGTGTGACAAAGATCCAAAGATATGTGTGTGT...AACCAAATAAGACTTATAAATCAGCAAGACTGTATGGCTGTCATAGGGATGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR CCA 72 bp | GAGCTCACTGATTGGCTAGACTGGCTCTTATCCTCCTaGTTTCTTCTTTCTAGTACTGGGATTACAGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: ELTDWLDWLLSS*FLLSSTGITAA Trigger: TGCAGCTGTAATCCCAGTACTAGAAAGAAGAAACCAGGAGGATAAGAGCCAGTCTAGCCAATCAGTGAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR TCA 72 bp | TTTGCAACATGGTCTTTCACTGAACTCAGAGCTCACTaGTTGGCTAGACTGGCTCTTATCCTCCTGGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: FATWSFTELRAH*LARLALILLVS Trigger: AGAAACCAGGAGGATAAGAGCCAGTCTAGCCAATCAGTGAGCTCTGAGTTCAGTGAAAGACCATGTTGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR TCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTaGTGTACATGTGGTCAATGGCAAGTGTCTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVCVCVSV*CTCGQWQVSSF Trigger: AAAGGAAGACACTTGCCATTGACCACATGTACATCACACAGACACACACACACACACACACACACACACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR CCA 72 bp | CAACATGGTCTTTCACTGAACTCAGAGCTCACTGATTaGCTAGACTGGCTCTTATCCTCCTGGTTTCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: QHGLSLNSELTD*LDWLLSSWFLL Trigger: AAGAAGAAACCAGGAGGATAAGAGCCAGTCTAGCCAATCAGTGAGCTCTGAGTTCAGTGAAAGACCATGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR CCA 72 bp | CTTTCACTGAACTCAGAGCTCACTGATTGGCTAGACTaGCTCTTATCCTCCTGGTTTCTTCTTTCTAGTACT | + |
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Preference number: 3 (lower is better) Translates to: LSLNSELTDWLD*LLSSWFLLSST Trigger: AGTACTAGAAAGAAGAAACCAGGAGGATAAGAGCCAGTCTAGCCAATCAGTGAGCTCTGAGTTCAGTGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR CCA 72 bp | GTGTGTGTGTGTGTGTGTGTCTGTGTGATGTACATGTaGTCAATGGCAAGTGTCTTCCTTTGTAGCTCTTTA | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCVCVMYM*SMASVFLCSSL Trigger: TAAAGAGCTACAAAGGAAGACACTTGCCATTGACCACATGTACATCACACAGACACACACACACACACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR TCA 72 bp | TTTTCTAGACTGATACCATTGTTCCTTTGTAACTTCTaGTACCTCCTGCTCATGGTGACTGGTATGGCACTT | + |
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Preference number: 3 (lower is better) Translates to: FSRLIPLFLCNF*YLLLMVTGMAL Trigger: AAGTGCCATACCAGTCACCATGAGCAGGAGGTATCAGAAGTTACAAAGGAACAATGGTATCAGTCTAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR-3UTR CAA 90 bp | TTTTGTCTAGTGATGGAAAAATGCTCCAAATGTGTGTGTGTGTGTGTGTGTGTGAACAAACAAAAGTGCTaGACTCTGAGTTCAGCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: FCLVMEKCSKCVCVCVCVNKQKC*TLSSAY Trigger: GTAAGCTGAACTCAGAGTCAAGCACTTTTGTTTGTT...CACACACACACACACACACACACATTTGGAGCATTTTTCCATCACTAGACAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTCTAGTACTGGGATTACAGCTGCACAGTATCATACCTGGCATTTTTATAGGAATCCACAAGCCTTaGGCAATATCAAAAGTTGCC | + |
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Preference number: 3 (lower is better) Translates to: FFLVLGLQLHSIIPGIFIGIHKP*AISKVA Trigger: GGCAACTTTTGATATTGCCAAAGGCTTGTGGATTCC...TATAAAAATGCCAGGTATGATACTGTGCAGCTGTAATCCCAGTACTAGAAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR TCA 72 bp | TATCTTGTGACCAATCTGACTATGAATACAGAAAACTaGCTCATGTACGATCGTACGCTCATGTACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: YLVTNLTMNTEN*LMYDRTLMYTH Trigger: GTGTGTGTACATGAGCGTACGATCGTACATGAGTCAGTTTTCTGTATTCATAGTCAGATTGGTCACAAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR GCA 72 bp | AGTTCAACTTTCTGCTTTTGTCTAGTGATGGAAAAATaGTCCAAATGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SSTFCFCLVMEK*SKCVCVCVCVC Trigger: ACACACACACACACACACACACACACATTTGGAGCATTTTTCCATCACTAGACAAAAGCAGAAAGTTGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR CCA 72 bp | TCTAGTACTGGGATTACAGCTGCACAGTATCATACCTaGCATTTTTATATGAGTGTTGGTAGTCTAGTTCAG | + |
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Preference number: 3 (lower is better) Translates to: SSTGITAAQYHT*HFYMSVGSLVQ Trigger: CTGAACTAGACTACCAACACTCATATAAAAATGCCAGGTATGATACTGTGCAGCTGTAATCCCAGTACTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTCTAGTACTGGGATTACAGCTGCACAGTATCATACCTGGCATTTTTATAGATTTTCCTACTTTGTaGCCTGGGGACTTCTTATCT | + |
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Preference number: 3 (lower is better) Translates to: FFLVLGLQLHSIIPGIFIDFPTL*PGDFLS Trigger: AGATAAGAAGTCCCCAGGCAACAAAGTAGGAAAATC...TATAAAAATGCCAGGTATGATACTGTGCAGCTGTAATCCCAGTACTAGAAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR-3UTR CAA 90 bp | TTCCATCCCTATGACAGCCATACAGTCTTGCTGATTTATAAGTCTTATTTGGTTAATGATTTTCCTACTTaGTTGCCTGGGGACTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: FHPYDSHTVLLIYKSYLVNDFPT*LPGDFL Trigger: TAAGAAGTCCCCAGGCAACAAAGTAGGAAAATCATT...AACCAAATAAGACTTATAAATCAGCAAGACTGTATGGCTGTCATAGGGATGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR TCA 72 bp | ACTAGACTTCATTTTCCATGTTTGGACGTACTTTCTTaGCATTATCAAGAAGAAAATCCAGTCTCCTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: TRLHFPCLDVLS*HYQEENPVSCL Trigger: TAGACAGGAGACTGGATTTTCTTCTTGATAATGTCAAGAAAGTACGTCCAAACATGGAAAATGAAGTCTAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR TCA 72 bp | AAACAAAAGTGCTTGACTCTGAGTTCAGCTTACATATaGCCAAGTTTCCAATTTGACCTATATCAAATTAGG | + |
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Preference number: 3 (lower is better) Translates to: KQKCLTLSSAYI*PSFQFDLYQIR Trigger: CCTAATTTGATATAGGTCAAATTGGAAACTTGGTCATATGTAAGCTGAACTCAGAGTCAAGCACTTTTGTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR GCA 72 bp | TACCTATCTTTCATCTATCTATACATTCTATGTACATaGATTTGGCCCCCAAAGGATAAGTTTGACATCTAT | + |
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Preference number: 3 (lower is better) Translates to: YLSFIYLYILCT*IWPPKDKFDIY Trigger: ATAGATGTCAAACTTATCCTTTGGGGGCCAAATGCATGTACATAGAATGTATAGATAGATGAAAGATAGGTA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR TCA 90 bp | CTCCAGCCAAAATATTTTAAGTCTACAACCAGAAGCCCTCATTGTGATCTAAAGCACCTGTACCAGGGTTaGCCAGCTAGTCTAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LQPKYFKSTTRSPHCDLKHLYQG*PASLAR Trigger: CCTGGCTAGACTAGCTGGTCAACCCTGGTACAGGTG...CTTTAGATCACAATGAGGGCTTCTGGTTGTAGACTTAAAATATTTTGGCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR TCA 90 bp | TTTTGTCTAGTGATGGAAAAATGCTCCAAATGTGTGTGTGTGTGTGTGTGTGTGATGGTGGAGCACAGCTaGGTGTTCTGCATTCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: FCLVMEKCSKCVCVCVCVMVEHS*VFCIPV Trigger: AACTGGAATGCAGAACACTCAGCTGTGCTCCACCAT...CACACACACACACACACACACACATTTGGAGCATTTTTCCATCACTAGACAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR GCA 90 bp | TTCCATCCCTATGACAGCCATACAGTCTTGCTGATTTATAAGTCTTATTTGGTTCCTGTACAGGAAGGATaGCAGAGGCCACAGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: FHPYDSHTVLLIYKSYLVPVQEG*QRPQTG Trigger: TCCTGTCTGTGGCCTCTGGCATCCTTCCTGTACAGG...AACCAAATAAGACTTATAAATCAGCAAGACTGTATGGCTGTCATAGGGATGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR TCA 90 bp | TTCCATCCCTATGACAGCCATACAGTCTTGCTGATTTATAAGTCTTATTTGGTTGGCATGATTCCAAACTaGCAGAGGAAGCCCACGAAG | + |
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Preference number: 4 (lower is better) Translates to: FHPYDSHTVLLIYKSYLVGMIPN*QRKPTK Trigger: CTTCGTGGGCTTCCTCTGTCAGTTTGGAATCATGCC...AACCAAATAAGACTTATAAATCAGCAAGACTGTATGGCTGTCATAGGGATGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR GCA 90 bp | TTCCATCCCTATGACAGCCATACAGTCTTGCTGATTTATAAGTCTTATTTGGTTGCCTTCGCAGACAGTTaGATTTGGGGGACAGACAGA | + |
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Preference number: 4 (lower is better) Translates to: FHPYDSHTVLLIYKSYLVAFADS*IWGTDR Trigger: TCTGTCTGTCCCCCAAATGCAACTGTCTGCGAAGGC...AACCAAATAAGACTTATAAATCAGCAAGACTGTATGGCTGTCATAGGGATGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR CCA 90 bp | TTCCATCCCTATGACAGCCATACAGTCTTGCTGATTTATAAGTCTTATTTGGTTAATAGGCCAGGATATTaGAGCCAGTTCCTCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: FHPYDSHTVLLIYKSYLVNRPGY*SQFLQG Trigger: GCCCTGGAGGAACTGGCTCCAATATCCTGGCCTATT...AACCAAATAAGACTTATAAATCAGCAAGACTGTATGGCTGTCATAGGGATGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR TCA 90 bp | GACTGTGACAATATCTCCAGCCAAAATATTTTAAGTCTACAACCAGAAGCCCTCGTTTGTCTCATCAAATaGTGGCCTGGAGTCCATTTC | + |
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Preference number: 4 (lower is better) Translates to: DCDNISSQNILSLQPEALVCLIK*WPGVHF Trigger: GAAATGGACTCCAGGCCATCATTTGATGAGACAAAC...GAGGGCTTCTGGTTGTAGACTTAAAATATTTTGGCTGGAGATATTGTCACAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR CCA 90 bp | TTCCATCCCTATGACAGCCATACAGTCTTGCTGATTTATAAGTCTTATTTGGTTTGTCCTAGGAACTTGTaGACTTCCACATTGCACCCC | + |
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Preference number: 4 (lower is better) Translates to: FHPYDSHTVLLIYKSYLVCPRNL*TSTLHP Trigger: GGGGTGCAATGTGGAAGTCCACAAGTTCCTAGGACA...AACCAAATAAGACTTATAAATCAGCAAGACTGTATGGCTGTCATAGGGATGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR CCA 90 bp | TTTTGTCTAGTGATGGAAAAATGCTCCAAATGTGTGTGTGTGTGTGTGTGTGTGAACAGTATAGATGAGTaGGAAGGTGAACACCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: FCLVMEKCSKCVCVCVCVNSIDE*EGEHQV Trigger: AACCTGGTGTTCACCTTCCCACTCATCTATACTGTT...CACACACACACACACACACACACATTTGGAGCATTTTTCCATCACTAGACAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR CCA 90 bp | TTCTTTCTAGTACTGGGATTACAGCTGCACAGTATCATACCTGGCATTTTTATAATGATCCAGGCACTTTaGTACAGTATTCCTCCAATC | + |
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Preference number: 4 (lower is better) Translates to: FFLVLGLQLHSIIPGIFIMIQAL*YSIPPI Trigger: GATTGGAGGAATACTGTACCAAAGTGCCTGGATCAT...TATAAAAATGCCAGGTATGATACTGTGCAGCTGTAATCCCAGTACTAGAAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR CAA 72 bp | AATGCCTTAAGACATTCTGAGTTCAACTTTCTGCTTTaGTCTAGTGATGGAAAAATGCTCCAAATGTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: NALRHSEFNFLL*SSDGKMLQMCV Trigger: CACACACATTTGGAGCATTTTTCCATCACTAGACAAAAGCAGAAAGTTGAACTCAGAATGTCTTAAGGCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR CAA 72 bp | TTCTATGTACATGCATTTGGCCCCCAAAGGATAAGTTaGACATCTATGATTTTAACTCACTATGGCCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: FYVHAFGPQRIS*TSMILTHYGQK Trigger: TTTTTGGCCATAGTGAGTTAAAATCATAGATGTCAAACTTATCCTTTGGGGGCCAAATGCATGTACATAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR CAA 72 bp | GGTATGGCACTTCATATGGGCTTAATATCTATCATATaGTCCCATTTAGACCTGCTTCATACAGATCATATT | + |
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Preference number: 4 (lower is better) Translates to: GMALHMGLISII*SHLDLLHTDHI Trigger: AATATGATCTGTATGAAGCAGGTCTAAATGGGACAATATGATAGATATTAAGCCCATATGAAGTGCCATACC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| 3UTR CAA 72 bp | AAGCACAAATTCCATCCCTATGACAGCCATACAGTCTaGCTGATTTATAAGTCTTATTTGGTTTCTACCATT | + |
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Preference number: 4 (lower is better) Translates to: KHKFHPYDSHTV*LIYKSYLVSTI Trigger: AATGGTAGAAACCAAATAAGACTTATAAATCAGCAAGACTGTATGGCTGTCATAGGGATGGAATTTGTGCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR CAA 90 bp | TACAGAAAACTGACTCATGTACGATCGTACGCTCATGTACACACACACACACACCGCCTTCGCAGACAGTaGCATTTGGGGGACAGACAG | + |
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Preference number: 5 (lower is better) Translates to: YRKLTHVRSYAHVHTHTHRLRRQ*HLGDRQ Trigger: CTGTCTGTCCCCCAAATGCAACTGTCTGCGAAGGCG...GTGTGTGTGTGTGTGTACATGAGCGTACGATCGTACATGAGTCAGTTTTCTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS TCA 90 bp | GAGGCCACAGACAGGATAAAGCCTGTGAGAGGCATGATTCCAAACTaGCAGAGGAAGCCCACGAAGATACCCCATGGTCTCTTTATATGT | + |
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Preference number: 5 (lower is better) Translates to: EATDRIKPVRGMIPN*QRKPTKIPHGLFIC Trigger: ACATATAAAGAGACCATGGGGTATCTTCGTGGGCTTCCTCTGTCAGTTTGGAATCATGCCTCTCACAGGCTTTATCCTGTCTGTGGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS CCA 90 bp | TGCTATCATAGGGAATCACAATCGTTCCCGAGTCAACCCACATCTTaGTGTAGACGAAGAGGCAAAGAGGCATCATTCCAAGGGCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: CYHRESQSFPSQPTS*CRRRGKEASFQGQA Trigger: TGCTTGCCCTTGGAATGATGCCTCTTTGCCTCTTCGTCTACACCAAGATGTGGGTTGACTCGGGAACGATTGTGATTCCCTATGATAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR CAA 90 bp | ACTCATGTACGATCGTACGCTCATGTACACACACACACACACACACACACACACCCTATAATCCACAGTTaGGGTTCAATGATCCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: THVRSYAHVHTHTHTHTHPIIHS*GSMIQA Trigger: TGCCTGGATCATTGAACCCAAACTGTGGATTATAGG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGAGCGTACGATCGTACATGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR CAA 90 bp | ACTCATGTACGATCGTACGCTCATGTACACACACACACACACACACACACACACAATGATCCAGGCACTTaGGTACAGTATTCCTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: THVRSYAHVHTHTHTHTHNDPGT*VQYSSN Trigger: ATTGGAGGAATACTGTACCAAAGTGCCTGGATCATT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGAGCGTACGATCGTACATGAGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR CAA 90 bp | ACTCATGTACGATCGTACGCTCATGTACACACACACACACACACACACACACACGTATTGAGAATTGCATaGAAGTTGCTCTCAGGTACT | + |
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Preference number: 5 (lower is better) Translates to: THVRSYAHVHTHTHTHTHVLRIA*KLLSGT Trigger: AGTACCTGAGAGCAACTTCAATGCAATTCTCAATAC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGAGCGTACGATCGTACATGAGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR CAA 90 bp | ACTCATGTACGATCGTACGCTCATGTACACACACACACACACACACACACACACCTGGAGTCCATTTCATaGTCTGTTTTCTCTAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: THVRSYAHVHTHTHTHTHLESIS*SVFSRN Trigger: GTTTCTAGAGAAAACAGACAATGAAATGGACTCCAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGAGCGTACGATCGTACATGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR CAA 90 bp | TACAGAAAACTGACTCATGTACGATCGTACGCTCATGTACACACACACACACACCTACTTCTCATCTGGTaGAAATCCCTTGTTTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: YRKLTHVRSYAHVHTHTHLLLIW*KSLVCL Trigger: GAGACAAACAAGGGATTTCAACCAGATGAGAAGTAG...GTGTGTGTGTGTGTGTACATGAGCGTACGATCGTACATGAGTCAGTTTTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR CAA 90 bp | CTCCAGCCAAAATATTTTAAGTCTACAACCAGAAGCCCTCATTGTGATCTAAAGAGAATTGCATTGAAGTaGCTCTCAGGTACTACGCAG | + |
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Preference number: 5 (lower is better) Translates to: LQPKYFKSTTRSPHCDLKRIALK*LSGTTQ Trigger: CTGCGTAGTACCTGAGAGCAACTTCAATGCAATTCT...CTTTAGATCACAATGAGGGCTTCTGGTTGTAGACTTAAAATATTTTGGCTGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS CCA 90 bp | ATTGTTCCTATAATCCACAGTTTGGGTTCAATGATCCAGGCACTTTaGTACAGTATTCCTCCAATCACAGCTATGAGCACAATGAGAATT | + |
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Preference number: 5 (lower is better) Translates to: IVPIIHSLGSMIQAL*YSIPPITAMSTMRI Trigger: AATTCTCATTGTGCTCATAGCTGTGATTGGAGGAATACTGTACCAAAGTGCCTGGATCATTGAACCCAAACTGTGGATTATAGGAACAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS CCA 90 bp | TCTCATCTGGTTGAAATCCCTTGTTTGTCTCATCAAATGATGGCCTaGAGTCCATTTCATTGTCTGTTTTCTCTAGAAACTCAGCATCAT | + |
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Preference number: 5 (lower is better) Translates to: SHLVEIPCLSHQMMA*SPFHCLFSLETQHH Trigger: ATGATGCTGAGTTTCTAGAGAAAACAGACAATGAAATGGACTCCAGGCCATCATTTGATGAGACAAACAAGGGATTTCAACCAGATGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR CAA 90 bp | TTCTTTCTAGTACTGGGATTACAGCTGCACAGTATCATACCTGGCATTTTTATAGTTGAAATCCCTTGTTaGTCTCATCAAATGATGGCC | + |
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Preference number: 5 (lower is better) Translates to: FFLVLGLQLHSIIPGIFIVEIPC*SHQMMA Trigger: GGCCATCATTTGATGAGACAAACAAGGGATTTCAAC...TATAAAAATGCCAGGTATGATACTGTGCAGCTGTAATCCCAGTACTAGAAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS-3UTR CAA 90 bp | TTCTTTCTAGTACTGGGATTACAGCTGCACAGTATCATACCTGGCATTTTTATAGTGCTCATCACTGTATaGAGAATTGCATTGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: FFLVLGLQLHSIIPGIFIVLITV*RIALKL Trigger: CAACTTCAATGCAATTCTCAATACAGTGATGAGCAC...TATAAAAATGCCAGGTATGATACTGTGCAGCTGTAATCCCAGTACTAGAAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS TCA 72 bp | GTTTCCAAGGCTACTGTTCGGCACCTGTACCAGGGTTaGCCAGCTAGTCTAGCCAGGAAGAAACCCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VSKATVRHLYQG*PASLARKKPRL Trigger: CAGCCTGGGTTTCTTCCTGGCTAGACTAGCTGGTCAACCCTGGTACAGGTGCCGAACAGTAGCCTTGGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS TCA 72 bp | GACAGGATAAAGCCTGTGAGAGGCATGATTCCAAACTaGCAGAGGAAGCCCACGAAGATACCCCATGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: DRIKPVRGMIPN*QRKPTKIPHGL Trigger: GAGACCATGGGGTATCTTCGTGGGCTTCCTCTGTCAGTTTGGAATCATGCCTCTCACAGGCTTTATCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS CCA 72 bp | AGGGAATCACAATCGTTCCCGAGTCAACCCACATCTTaGTGTAGACGAAGAGGCAAAGAGGCATCATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: RESQSFPSQPTS*CRRRGKEASFQ Trigger: TTGGAATGATGCCTCTTTGCCTCTTCGTCTACACCAAGATGTGGGTTGACTCGGGAACGATTGTGATTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS CAA 90 bp | ATGGTGAGCACAGTGCTCATCACTGTATTGAGAATTGCATTGAAGTaGCTCTCAGGTACTACGCAGGAATCGCCTTCGCAGACAGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: MVSTVLITVLRIALK*LSGTTQESPSQTVA Trigger: TGCAACTGTCTGCGAAGGCGATTCCTGCGTAGTACCTGAGAGCAACTTCAATGCAATTCTCAATACAGTGATGAGCACTGTGCTCACCAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS CAA 90 bp | AAGAGGATGGTGAGCACAGTGCTCATCACTGTATTGAGAATTGCATaGAAGTTGCTCTCAGGTACTACGCAGGAATCGCCTTCGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: KRMVSTVLITVLRIA*KLLSGTTQESPSQT Trigger: TGTCTGCGAAGGCGATTCCTGCGTAGTACCTGAGAGCAACTTCAATGCAATTCTCAATACAGTGATGAGCACTGTGCTCACCATCCTCTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS CAA 90 bp | ATCACCATGGCTAAGAGGATGGTGAGCACAGTGCTCATCACTGTATaGAGAATTGCATTGAAGTTGCTCTCAGGTACTACGCAGGAATCG | + |
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Preference number: 6 (lower is better) Translates to: ITMAKRMVSTVLITV*RIALKLLSGTTQES Trigger: CGATTCCTGCGTAGTACCTGAGAGCAACTTCAATGCAATTCTCAATACAGTGATGAGCACTGTGCTCACCATCCTCTTAGCCATGGTGAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS CAA 72 bp | ACAGTGCTCATCACTGTATTGAGAATTGCATTGAAGTaGCTCTCAGGTACTACGCAGGAATCGCCTTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: TVLITVLRIALK*LSGTTQESPSQ Trigger: CTGCGAAGGCGATTCCTGCGTAGTACCTGAGAGCAACTTCAATGCAATTCTCAATACAGTGATGAGCACTGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS CAA 72 bp | GCTAAGAGGATGGTGAGCACAGTGCTCATCACTGTATaGAGAATTGCATTGAAGTTGCTCTCAGGTACTACG | + |
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Preference number: 6 (lower is better) Translates to: AKRMVSTVLITV*RIALKLLSGTT Trigger: CGTAGTACCTGAGAGCAACTTCAATGCAATTCTCAATACAGTGATGAGCACTGTGCTCACCATCCTCTTAGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS CAA 72 bp | TATAATCCACAGTTTGGGTTCAATGATCCAGGCACTTaGGTACAGTATTCCTCCAATCACAGCTATGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: YNPQFGFNDPGT*VQYSSNHSYEH Trigger: GTGCTCATAGCTGTGATTGGAGGAATACTGTACCAAAGTGCCTGGATCATTGAACCCAAACTGTGGATTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS TCA 72 bp | CTCATCTGGTTGAAATCCCTTGTTTGTCTCATCAAATaGTGGCCTGGAGTCCATTTCATTGTCTGTTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LIWLKSLVCLIK*WPGVHFIVCFL Trigger: GAGAAAACAGACAATGAAATGGACTCCAGGCCATCATTTGATGAGACAAACAAGGGATTTCAACCAGATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS CAA 90 bp | TATTGTTCCTATAATCCACAGTTTGGGTTCAATGATCCAGGCACTTaGGTACAGTATTCCTCCAATCACAGCTATGAGCACAATGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: YCSYNPQFGFNDPGT*VQYSSNHSYEHNEN Trigger: ATTCTCATTGTGCTCATAGCTGTGATTGGAGGAATACTGTACCAAAGTGCCTGGATCATTGAACCCAAACTGTGGATTATAGGAACAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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| CDS CCA 72 bp | GTTGAAATCCCTTGTTTGTCTCATCAAATGATGGCCTaGAGTCCATTTCATTGTCTGTTTTCTCTAGAAACT | + |
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Preference number: 6 (lower is better) Translates to: VEIPCLSHQMMA*SPFHCLFSLET Trigger: AGTTTCTAGAGAAAACAGACAATGAAATGGACTCCAGGCCATCATTTGATGAGACAAACAAGGGATTTCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023835.3 |
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