Pregenerated sensors for SLC10A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021135Ensembl transcript IDs: ENSMUST00000095572.5, ENSMUST00000218162.2, ENSMUST00000218342.2, ENSMUST00000220266.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTAAAGGCGTGCGCCACCAGCTGGGCTCTGACCTTGCAGAAAGCTaGACACTAAAGAATGCTGAAGCTTTCCAAATTAAAGAAACCCTA | + |
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Preference number: 1 (lower is better) Translates to: IKGVRHQLGSDLAES*TLKNAEAFQIKETL Trigger: TAGGGTTTCTTTAATTTGGAAAGCTTCAGCATTCTTTAGTGTTCAGCTTTCTGCAAGGTCAGAGCCCAGCTGGTGGCGCACGCCTTTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218342.2 |
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| 3UTR GCA 90 bp | GAGTTCATAGCTGCTGAAAGTGTTCTTGGTTTCTTGAGACAGTCTTaGTGTGTACTCAAGGTTGACCTTGAGTCTCTGAGCATTGGAATT | + |
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Preference number: 1 (lower is better) Translates to: EFIAAESVLGFLRQS*CVLKVDLESLSIGI Trigger: AATTCCAATGCTCAGAGACTCAAGGTCAACCTTGAGTACACAGCAAGACTGTCTCAAGAAACCAAGAACACTTTCAGCAGCTATGAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| 3UTR-3UTR CCA 90 bp | GACCAGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGCGTGCGCCACCAGCTaGGCTCTGACCTTGCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: DQLASNSEIHLPLPPKCWACATS*ALTLQK Trigger: TTTCTGCAAGGTCAGAGCCCAGCTGGTGGCGCACGC...CCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCTGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218342.2 |
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| 3UTR-3UTR GCA 90 bp | AACTCACTCTGTAGACCAGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCCTGGGATTAAAGGCGTaGGCCACCAGCTGGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: NSLCRPAGLELRNPPASALGLKA*ATSWAL Trigger: CAGAGCCCAGCTGGTGGCGCACGCCTTTAATCCCAG...GGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCTGGTCTACAGAGTGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218342.2 |
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| 3UTR CAA 90 bp | GAGGAGGTAGCCAGTAAGTGTGGTGTCATGACGAACATGATGCTGTaGCCCACATTGATGACAGACAGGACTGTGACAGCCACAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: EEVASKCGVMTNMML*PTLMTDRTVTATER Trigger: CCTCTCTGTGGCTGTCACAGTCCTGTCTGTCATCAATGTGGGCAACAGCATCATGTTCGTCATGACACCACACTTACTGGCTACCTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220266.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGACCAGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCCAGATGCATTAACTTaGAGTAGTGTTACTGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: CRPAGLELRNPPASASQVPDALT*SSVTGE Trigger: TTCACCAGTAACACTACTCCAAGTTAATGCATCTGG...CACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCTGGTCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218342.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTGTGGTGTCATGACGAACATGATGCTGTTGCCCACATTGATGACAGACAGGGTAGGGTACATAGTGTaGCCTTTTGGACTTCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: KCGVMTNMMLLPTLMTDRVGYIV*PFGLQE Trigger: TTCCTGAAGTCCAAAAGGCCACACTATGTACCCTAC...CCTGTCTGTCATCAATGTGGGCAACAGCATCATGTTCGTCATGACACCACACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220266.2 |
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| 3UTR-3UTR TCA 90 bp | CATGAAGCAGGTTGTGGATGCTTAATGAGCAAAACACCTGCTTATTGGAAAGTCGTGTTCTTGGTTTCTTaGGACAGTCTTGCTGTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: HEAGCGCLMSKTPAYWKVVFLVS*DSLAVY Trigger: GTACACAGCAAGACTGTCTCAAGAAACCAAGAACAC...GACTTTCCAATAAGCAGGTGTTTTGCTCATTAAGCATCCACAACCTGCTTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| 3UTR-3UTR GCA 90 bp | CAACATGAAGCAGGTTGTGGATGCTTAATGAGCAAAACACCTGCTTATTGGAAATGGTTCCTGGATAGATaGCCTTCTGCCTCAGTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: QHEAGCGCLMSKTPAYWKWFLDR*PSASVH Trigger: ATGAACTGAGGCAGAAGGGCATCTATCCAGGAACCA...TTTCCAATAAGCAGGTGTTTTGCTCATTAAGCATCCACAACCTGCTTCATGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| 3UTR-3UTR TCA 90 bp | CATGAAGCAGGTTGTGGATGCTTAATGAGCAAAACACCTGCTTATTGGAAAGTCAGAGTTCATAGCTGCTaGAAGTGTTCTTGGTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: HEAGCGCLMSKTPAYWKVRVHSC*KCSWFL Trigger: AAGAAACCAAGAACACTTTCAGCAGCTATGAACTCT...GACTTTCCAATAAGCAGGTGTTTTGCTCATTAAGCATCCACAACCTGCTTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTTTTGAGTTACAACATGAAGCAGGTTGTGGATGCTTAATGAGCAAAACAATTTTTGGGGATGGATaGTGGTTCCTGGATAGATGC | + |
|
Preference number: 2 (lower is better) Translates to: FPFELQHEAGCGCLMSKTIFGDG*WFLDRC Trigger: GCATCTATCCAGGAACCATCATCCATCCCCAAAAAT...TGTTTTGCTCATTAAGCATCCACAACCTGCTTCATGTTGTAACTCAAAAGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| 3UTR-3UTR CAA 90 bp | GGAACTCACTCTGTAGACCAGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGGGTTCCAGTTCCTACTaGGAATCTTTTGTTGGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: GTHSVDQLASNSEIHLPLGSSSY*ESFVGS Trigger: GCTACCAACAAAAGATTCCAAGTAGGAACTGGAACC...CAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCTGGTCTACAGAGTGAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218342.2 |
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| 3UTR GCA 72 bp | GACAGCCACAGAGAGGGAGAAAGTGATGATCATGCCTaGCTTGAGGACGTAGGGTACATAGTGTGGCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: DSHREGESDDHA*LEDVGYIVWPF Trigger: AAAAGGCCACACTATGTACCCTACGTCCTCAAGGCAGGCATGATCATCACTTTCTCCCTCTCTGTGGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220266.2 |
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| 3UTR CCA 72 bp | GCTGGCATGCTGTTTTACCTGGTTCCAGTTCCTACTTaGAATCTTTTGTTGGTAGCTCAGGTCCAGAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: AGMLFYLVPVPT*NLLLVAQVQSK Trigger: TTTGCTCTGGACCTGAGCTACCAACAAAAGATTCCAAGTAGGAACTGGAACCAGGTAAAACAGCATGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218342.2 |
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| 3UTR-3UTR CAA 90 bp | ACAAATAGCAGATTTTTGGGGATGGATGATGGTTCCTGGATAGATGCCCTTCTGTCTGCTGTTGAAGGTTaGCTGGAAGTGCTAGACAAT | + |
|
Preference number: 3 (lower is better) Translates to: TNSRFLGMDDGSWIDALLSAVEG*LEVLDN Trigger: ATTGTCTAGCACTTCCAGCAAACCTTCAACAGCAGA...CAGAAGGGCATCTATCCAGGAACCATCATCCATCCCCAAAAATCTGCTATTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| 3UTR CCA 72 bp | ACAAATAGCAGATTTTTGGGGATGGATGATGGTTCCTaGATAGATGCCCTTCTGCCTCAGTTCATTGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: TNSRFLGMDDGS*IDALLPQFIAS Trigger: TGAAGCAATGAACTGAGGCAGAAGGGCATCTATCCAGGAACCATCATCCATCCCCAAAAATCTGCTATTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| 3UTR TCA 72 bp | CTGTTTCATAGAGCCTTCATAAGAGTTCATAGCTGCTaGAAGTGTTCTTGGTTTCTTGAGACAGTCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LFHRAFIRVHSC*KCSWFLETVLL Trigger: CAGCAAGACTGTCTCAAGAAACCAAGAACACTTTCAGCAGCTATGAACTCTTATGAAGGCTCTATGAAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTTTTGAGTTACAACATGAAGCAGGTTGTGGATGCTTAATGAGCAAAACATCTGCTGTTGAAGGTTaGCTGGAAGTGCTAGACAAT | + |
|
Preference number: 3 (lower is better) Translates to: FPFELQHEAGCGCLMSKTSAVEG*LEVLDN Trigger: ATTGTCTAGCACTTCCAGCAAACCTTCAACAGCAGA...TGTTTTGCTCATTAAGCATCCACAACCTGCTTCATGTTGTAACTCAAAAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTTTTGAGTTACAACATGAAGCAGGTTGTGGATGCTTAATGAGCAAAACAAGTGTTCTTGGTTTCTaGAGACAGTCTTGCTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: FPFELQHEAGCGCLMSKTSVLGF*RQSCCV Trigger: TACACAGCAAGACTGTCTCAAGAAACCAAGAACACT...TGTTTTGCTCATTAAGCATCCACAACCTGCTTCATGTTGTAACTCAAAAGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| 3UTR GCA 72 bp | TTTCCTTTTGAGTTACAACATGAAGCAGGTTGTGGATaGTTAATGAGCAAAACACCTGCTTATTGGAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: FPFELQHEAGCG*LMSKTPAYWKV Trigger: GACTTTCCAATAAGCAGGTGTTTTGCTCATTAAGCATCCACAACCTGCTTCATGTTGTAACTCAAAAGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR TCA 90 bp | AACTCACTCTGTAGACCAGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCATGCCCAAGGCAGTaGAGCTGGAGCAGGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NSLCRPAGLELRNPPASASCPRQ*SWSRWS Trigger: TGACCACCTGCTCCAGCTTCACTGCCTTGGGCATGA...GGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCTGGTCTACAGAGTGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218342.2 |
||
| CDS-3UTR TCA 90 bp | GGAACTCACTCTGTAGACCAGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGGCGGCAGGGAGAAATTaGAGGGGGCTGATACGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTHSVDQLASNSEIHLPLAAGRN*RGLIRC Trigger: ACAACGTATCAGCCCCCTTCAATTTCTCCCTGCCGC...CAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCTGGTCTACAGAGTGAGTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218342.2 |
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| CDS-3UTR TCA 90 bp | GGGATGGATGATGGTTCCTGGATAGATGCCCTTCTGCCTCAGTTCATTGCTTCATCATGCCCAAGGCAGTaGAGCTGGAGCAGGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GMDDGSWIDALLPQFIASSCPRQ*SWSRWS Trigger: TGACCACCTGCTCCAGCTTCACTGCCTTGGGCATGA...TGAAGCAATGAACTGAGGCAGAAGGGCATCTATCCAGGAACCATCATCCATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR TCA 90 bp | GGGATGGATGATGGTTCCTGGATAGATGCCCTTCTGCCTCAGTTCATTGCTTCAGCGGCAGGGAGAAATTaGAGGGGGCTGATACGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GMDDGSWIDALLPQFIASAAGRN*RGLIRC Trigger: ACAACGTATCAGCCCCCTTCAATTTCTCCCTGCCGC...TGAAGCAATGAACTGAGGCAGAAGGGCATCTATCCAGGAACCATCATCCATCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR TCA 90 bp | GTAGCCAGTAAGTGTGGTGTCATGACGAACATGATGCTGTTGCCCACATTGATGGCGGCAGGGAGAAATTaGAGGGGGCTGATACGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VASKCGVMTNMMLLPTLMAAGRN*RGLIRC Trigger: ACAACGTATCAGCCCCCTTCAATTTCTCCCTGCCGC...CATCAATGTGGGCAACAGCATCATGTTCGTCATGACACCACACTTACTGGCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220266.2 |
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| CDS-3UTR CCA 90 bp | AACTCACTCTGTAGACCAGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCCATAGTGTGGCCTTTTaGACTTCAGGAAGATCCCTA | + |
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Preference number: 4 (lower is better) Translates to: NSLCRPAGLELRNPPASAHSVAF*TSGRSL Trigger: TAGGGATCTTCCTGAAGTCCAAAAGGCCACACTATG...GGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCTGGTCTACAGAGTGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218342.2 |
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| CDS-3UTR CCA 90 bp | GGAACTCACTCTGTAGACCAGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGGTAGGGTACATAGTGTaGCCTTTTGGACTTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: GTHSVDQLASNSEIHLPLVGYIV*PFGLQE Trigger: TTCCTGAAGTCCAAAAGGCCACACTATGTACCCTAC...CAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCTGGTCTACAGAGTGAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218342.2 |
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| 3UTR CAA 72 bp | TGTGGTGTCATGACGAACATGATGCTGTTGCCCACATaGATGACAGACAGGACTGTGACAGCCACAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: CGVMTNMMLLPT*MTDRTVTATER Trigger: CCTCTCTGTGGCTGTCACAGTCCTGTCTGTCATCAATGTGGGCAACAGCATCATGTTCGTCATGACACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220266.2 |
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| CDS-3UTR TCA 90 bp | TTGGGGATGGATGATGGTTCCTGGATAGATGCCCTTCTGCCTCAGTTCATTGCTTCAATGCTGGTCAGATaGAAGACCTTGCCCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LGMDDGSWIDALLPQFIASMLVR*KTLPRR Trigger: CCTTCTGGGCAAGGTCTTTCATCTGACCAGCATTGA...AGCAATGAACTGAGGCAGAAGGGCATCTATCCAGGAACCATCATCCATCCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR GCA 90 bp | GGGATGGATGATGGTTCCTGGATAGATGCCCTTCTGCCTCAGTTCATTGCTTCATGGCCAGAGCCTCAATaGTGGTCAGATGAAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: GMDDGSWIDALLPQFIASWPEPQ*WSDERP Trigger: AGGTCTTTCATCTGACCAGCATTGAGGCTCTGGCCA...TGAAGCAATGAACTGAGGCAGAAGGGCATCTATCCAGGAACCATCATCCATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR GCA 90 bp | TACCTGGTTCCAGTTCCTACTTGGAATCTTTTGTTGGTAGCTCAGGTCCAGAGCTGGCCAGAGCCTCAATaGTGGTCAGATGAAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: YLVPVPTWNLLLVAQVQSWPEPQ*WSDERP Trigger: AGGTCTTTCATCTGACCAGCATTGAGGCTCTGGCCA...GCTCTGGACCTGAGCTACCAACAAAAGATTCCAAGTAGGAACTGGAACCAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218342.2 |
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| 3UTR CAA 72 bp | CGCTGGCATGCTGTTTTACCTGGTTCCAGTTCCTACTaGGAATCTTTTGTTGGTAGCTCAGGTCCAGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: RWHAVLPGSSSY*ESFVGSSGPEQ Trigger: TTGCTCTGGACCTGAGCTACCAACAAAAGATTCCAAGTAGGAACTGGAACCAGGTAAAACAGCATGCCAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218342.2 |
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| CDS-3UTR TCA 90 bp | CATGAAGCAGGTTGTGGATGCTTAATGAGCAAAACACCTGCTTATTGGAAAGTCGCGGCAGGGAGAAATTaGAGGGGGCTGATACGTTGT | + |
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Preference number: 4 (lower is better) Translates to: HEAGCGCLMSKTPAYWKVAAGRN*RGLIRC Trigger: ACAACGTATCAGCCCCCTTCAATTTCTCCCTGCCGC...GACTTTCCAATAAGCAGGTGTTTTGCTCATTAAGCATCCACAACCTGCTTCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR CCA 90 bp | TTGGGGATGGATGATGGTTCCTGGATAGATGCCCTTCTGCCTCAGTTCATTGCTCATAGTGTGGCCTTTTaGACTTCAGGAAGATCCCTA | + |
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Preference number: 4 (lower is better) Translates to: LGMDDGSWIDALLPQFIAHSVAF*TSGRSL Trigger: TAGGGATCTTCCTGAAGTCCAAAAGGCCACACTATG...AGCAATGAACTGAGGCAGAAGGGCATCTATCCAGGAACCATCATCCATCCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR CCA 90 bp | GGGATGGATGATGGTTCCTGGATAGATGCCCTTCTGCCTCAGTTCATTGCTTCACATAGTGTGGCCTTTTaGACTTCAGGAAGATCCCTA | + |
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Preference number: 4 (lower is better) Translates to: GMDDGSWIDALLPQFIASHSVAF*TSGRSL Trigger: TAGGGATCTTCCTGAAGTCCAAAAGGCCACACTATG...TGAAGCAATGAACTGAGGCAGAAGGGCATCTATCCAGGAACCATCATCCATCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR TCA 90 bp | AGACAATCTGGCACACTAGGTGTTACTTTCCTTGTTGCTTCTAAGTTTTCACATTCATGCCCAAGGCAGTaGAGCTGGAGCAGGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: RQSGTLGVTFLVASKFSHSCPRQ*SWSRWS Trigger: TGACCACCTGCTCCAGCTTCACTGCCTTGGGCATGA...ATGTGAAAACTTAGAAGCAACAAGGAAAGTAACACCTAGTGTGCCAGATTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR TCA 90 bp | GCTGGAAGTGCTAGACAATCTGGCACACTAGGTGTTACTTTCCTTGTTGCTTCTGGTCCTTCTGAGGTTTaGTTTTCAAATAGCACCGGA | + |
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Preference number: 4 (lower is better) Translates to: AGSARQSGTLGVTFLVASGPSEV*FSNSTG Trigger: TCCGGTGCTATTTGAAAATCAAACCTCAGAAGGACC...AGAAGCAACAAGGAAAGTAACACCTAGTGTGCCAGATTGTCTAGCACTTCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR GCA 90 bp | CATGAAGCAGGTTGTGGATGCTTAATGAGCAAAACACCTGCTTATTGGAAAGTCTGGCCAGAGCCTCAATaGTGGTCAGATGAAAGACCT | + |
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Preference number: 4 (lower is better) Translates to: HEAGCGCLMSKTPAYWKVWPEPQ*WSDERP Trigger: AGGTCTTTCATCTGACCAGCATTGAGGCTCTGGCCA...GACTTTCCAATAAGCAGGTGTTTTGCTCATTAAGCATCCACAACCTGCTTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR CCA 90 bp | GCTGGAAGTGCTAGACAATCTGGCACACTAGGTGTTACTTTCCTTGTTGCTTCTGTAGGGTACATAGTGTaGCCTTTTGGACTTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: AGSARQSGTLGVTFLVASVGYIV*PFGLQE Trigger: TTCCTGAAGTCCAAAAGGCCACACTATGTACCCTAC...AGAAGCAACAAGGAAAGTAACACCTAGTGTGCCAGATTGTCTAGCACTTCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR GCA 90 bp | CTGGATAGATGCCCTTCTGCCTCAGTTCATTGCTTCATGATTCTGCTGTTGAAGAGTAGCATCTTCTGTTaGAGCAGCCTTGTAGGTAAT | + |
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Preference number: 4 (lower is better) Translates to: LDRCPSASVHCFMILLLKSSIFC*SSLVGN Trigger: ATTACCTACAAGGCTGCTGCAACAGAAGATGCTACT...CTTCAACAGCAGAATCATGAAGCAATGAACTGAGGCAGAAGGGCATCTATCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR GCA 90 bp | ACAAATAGCAGATTTTTGGGGATGGATGATGGTTCCTGGATAGATGCCCTTCTGAGTAGCATCTTCTGTTaGAGCAGCCTTGTAGGTAAT | + |
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Preference number: 4 (lower is better) Translates to: TNSRFLGMDDGSWIDALLSSIFC*SSLVGN Trigger: ATTACCTACAAGGCTGCTGCAACAGAAGATGCTACT...CAGAAGGGCATCTATCCAGGAACCATCATCCATCCCCAAAAATCTGCTATTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR TCA 90 bp | TTGGAATCTTTTGTTGGTAGCTCAGGTCCAGAGCAAATACTCATAGGAGATGAGTACCCTTCTGAGGTTTaGTTTTCAAATAGCACCGGA | + |
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Preference number: 4 (lower is better) Translates to: LESFVGSSGPEQILIGDEYPSEV*FSNSTG Trigger: TCCGGTGCTATTTGAAAATCAAACCTCAGAAGGGTA...CTCATCTCCTATGAGTATTTGCTCTGGACCTGAGCTACCAACAAAAGATTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218342.2 |
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| CDS-3UTR GCA 90 bp | GCTGGAAGTGCTAGACAATCTGGCACACTAGGTGTTACTTTCCTTGTTGCTTCTGAAGAGAAGTCCTTCTaGAAGCTGAAAAATCATATA | + |
|
Preference number: 4 (lower is better) Translates to: AGSARQSGTLGVTFLVASEEKSF*KLKNHI Trigger: TATATGATTTTTCAGCTTGCAGAAGGACTTCTCTTC...AGAAGCAACAAGGAAAGTAACACCTAGTGTGCCAGATTGTCTAGCACTTCCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR TCA 90 bp | TTTCCTTTTGAGTTACAACATGAAGCAGGTTGTGGATGCTTAATGAGCAAAACAGGTCCTTCTGAGGTTTaGTTTTCAAATAGCACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPFELQHEAGCGCLMSKTGPSEV*FSNSTG Trigger: TCCGGTGCTATTTGAAAATCAAACCTCAGAAGGACC...TGTTTTGCTCATTAAGCATCCACAACCTGCTTCATGTTGTAACTCAAAAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR GCA 90 bp | CAACATGAAGCAGGTTGTGGATGCTTAATGAGCAAAACACCTGCTTATTGGAAAGAAGAGAAGTCCTTCTaGAAGCTGAAAAATCATATA | + |
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Preference number: 4 (lower is better) Translates to: QHEAGCGCLMSKTPAYWKEEKSF*KLKNHI Trigger: TATATGATTTTTCAGCTTGCAGAAGGACTTCTCTTC...TTTCCAATAAGCAGGTGTTTTGCTCATTAAGCATCCACAACCTGCTTCATGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| 3UTR CAA 72 bp | AGACATGTTTTAGTTTCAAGATCGTTCTCTGTAATATaGAAGCTTGTCTTACAAAGTCAGGCCCATGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: RHVLVSRSFSVI*KLVLQSQAHEN Trigger: GTTCTCATGGGCCTGACTTTGTAAGACAAGCTTCAATATTACAGAGAACGATCTTGAAACTAAAACATGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218342.2 |
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| CDS CCA 90 bp | AACATAACTACCAGAATGACGCTGAGCGCAGTGTCTGTGGCCCGGTaGCCAAAGCCAGGCGGCAGGGAGAAATTGAAGGGGGCTGATACG | + |
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Preference number: 5 (lower is better) Translates to: NITTRMTLSAVSVAR*PKPGGREKLKGADT Trigger: CGTATCAGCCCCCTTCAATTTCTCCCTGCCGCCTGGCTTTGGCCACCGGGCCACAGACACTGCGCTCAGCGTCATTCTGGTAGTTATGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 ENSMUST00000218342.2 ENSMUST00000220266.2 |
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| CDS TCA 90 bp | GAGCAGCCGCAGATGAGGATGGCCAGAGCCTCAATGCTGGTCAGATaGAAGACCTTGCCCAGAAGGAAAGCACTGAGGGGCATGATACCG | + |
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Preference number: 5 (lower is better) Translates to: EQPQMRMARASMLVR*KTLPRRKALRGMIP Trigger: CGGTATCATGCCCCTCAGTGCTTTCCTTCTGGGCAAGGTCTTTCATCTGACCAGCATTGAGGCTCTGGCCATCCTCATCTGCGGCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 ENSMUST00000218342.2 |
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| CDS TCA 90 bp | TACTGGGCCACTATGGCGATGATCACCCCTTTGGGCTTCCAGAAGTaGGCCTTGATCTTGCTGAACTCCATGGTGCAGCCAAGCGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: YWATMAMITPLGFQK*ALILLNSMVQPSES Trigger: GCTCTCGCTTGGCTGCACCATGGAGTTCAGCAAGATCAAGGCTCACTTCTGGAAGCCCAAAGGGGTGATCATCGCCATAGTGGCCCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 ENSMUST00000218342.2 |
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| CDS-3UTR CAA 90 bp | GGAACTCACTCTGTAGACCAGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGACGAACATGATGCTGTaGCCCACATTGATGACAGAC | + |
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Preference number: 5 (lower is better) Translates to: GTHSVDQLASNSEIHLPLTNMML*PTLMTD Trigger: GTCTGTCATCAATGTGGGCAACAGCATCATGTTCGT...CAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCTGGTCTACAGAGTGAGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218342.2 |
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| CDS CCA 90 bp | CCATTAGGGGAAAGGCCAGGTTGTGTAGGAGGATTATTCCCGTTGTaGGTACCTTTTTCCAGAGCTGCTGGAGTAGCATCTTCTGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: PLGERPGCVGGLFPL*VPFSRAAGVASSVA Trigger: TGCAACAGAAGATGCTACTCCAGCAGCTCTGGAAAAAGGTACCCACAACGGGAATAATCCTCCTACACAACCTGGCCTTTCCCCTAATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR CAA 90 bp | GGGATGGATGATGGTTCCTGGATAGATGCCCTTCTGCCTCAGTTCATTGCTTCAACGAACATGATGCTGTaGCCCACATTGATGACAGAC | + |
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Preference number: 5 (lower is better) Translates to: GMDDGSWIDALLPQFIASTNMML*PTLMTD Trigger: GTCTGTCATCAATGTGGGCAACAGCATCATGTTCGT...TGAAGCAATGAACTGAGGCAGAAGGGCATCTATCCAGGAACCATCATCCATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR CAA 90 bp | TTGGGGATGGATGATGGTTCCTGGATAGATGCCCTTCTGCCTCAGTTCATTGCTACAGAGTTGGACGTTTaGGAATCCTGTTTCCATGCT | + |
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Preference number: 5 (lower is better) Translates to: LGMDDGSWIDALLPQFIATELDV*ESCFHA Trigger: AGCATGGAAACAGGATTCCAAAACGTCCAACTCTGT...AGCAATGAACTGAGGCAGAAGGGCATCTATCCAGGAACCATCATCCATCCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR CAA 90 bp | ACAAATAGCAGATTTTTGGGGATGGATGATGGTTCCTGGATAGATGCCCTTCTGAGGGGAAAGGCCAGGTaGTGTAGGAGGATTATTCCC | + |
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Preference number: 5 (lower is better) Translates to: TNSRFLGMDDGSWIDALLRGKAR*CRRIIP Trigger: GGGAATAATCCTCCTACACAACCTGGCCTTTCCCCT...CAGAAGGGCATCTATCCAGGAACCATCATCCATCCCCAAAAATCTGCTATTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR CAA 90 bp | TGTGGTGTCATGACGAACATGATGCTGTTGCCCACATTGATGACAGACAGGACTCATAATGCCTTGATCTaGCTGAACTCCATGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: CGVMTNMMLLPTLMTDRTHNALI*LNSMVQ Trigger: CTGCACCATGGAGTTCAGCAAGATCAAGGCATTATG...AGTCCTGTCTGTCATCAATGTGGGCAACAGCATCATGTTCGTCATGACACCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220266.2 |
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| CDS GCA 90 bp | GTTGTGGGTACCTTTTTCCAGAGCTGCTGGAGTAGCATCTTCTGTTaGAGCAGCCTTGTAGGTAATTTTTGTTTGGTCCTTCTGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: VVGTFFQSCWSSIFC*SSLVGNFCLVLLRF Trigger: AAACCTCAGAAGGACCAAACAAAAATTACCTACAAGGCTGCTGCAACAGAAGATGCTACTCCAGCAGCTCTGGAAAAAGGTACCCACAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS GCA 90 bp | TTGTGTAGGAGGATTATTCCCGTTGTGGGTACCTTTTTCCAGAGCTaGTGGAGTAGCATCTTCTGTTGCAGCAGCCTTGTAGGTAATTTT | + |
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Preference number: 5 (lower is better) Translates to: LCRRIIPVVGTFFQS*WSSIFCCSSLVGNF Trigger: AAAATTACCTACAAGGCTGCTGCAACAGAAGATGCTACTCCAGCAGCTCTGGAAAAAGGTACCCACAACGGGAATAATCCTCCTACACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS CCA 90 bp | TGTAGGAGGATTATTCCCGTTGTGGGTACCTTTTTCCAGAGCTGCTaGAGTAGCATCTTCTGTTGCAGCAGCCTTGTAGGTAATTTTTGT | + |
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Preference number: 5 (lower is better) Translates to: CRRIIPVVGTFFQSC*SSIFCCSSLVGNFC Trigger: ACAAAAATTACCTACAAGGCTGCTGCAACAGAAGATGCTACTCCAGCAGCTCTGGAAAAAGGTACCCACAACGGGAATAATCCTCCTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR CAA 90 bp | CTGGATAGATGCCCTTCTGCCTCAGTTCATTGCTTCATGATTCTGCTGTTGAAGACAGAGTTGGACGTTTaGGAATCCTGTTTCCATGCT | + |
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Preference number: 5 (lower is better) Translates to: LDRCPSASVHCFMILLLKTELDV*ESCFHA Trigger: AGCATGGAAACAGGATTCCAAAACGTCCAACTCTGT...CTTCAACAGCAGAATCATGAAGCAATGAACTGAGGCAGAAGGGCATCTATCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR CAA 90 bp | CAACATGAAGCAGGTTGTGGATGCTTAATGAGCAAAACACCTGCTTATTGGAAAAGGGGAAAGGCCAGGTaGTGTAGGAGGATTATTCCC | + |
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Preference number: 5 (lower is better) Translates to: QHEAGCGCLMSKTPAYWKRGKAR*CRRIIP Trigger: GGGAATAATCCTCCTACACAACCTGGCCTTTCCCCT...TTTCCAATAAGCAGGTGTTTTGCTCATTAAGCATCCACAACCTGCTTCATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS-3UTR CAA 90 bp | CATGAAGCAGGTTGTGGATGCTTAATGAGCAAAACACCTGCTTATTGGAAAGTCACGAACATGATGCTGTaGCCCACATTGATGACAGAC | + |
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Preference number: 5 (lower is better) Translates to: HEAGCGCLMSKTPAYWKVTNMML*PTLMTD Trigger: GTCTGTCATCAATGTGGGCAACAGCATCATGTTCGT...GACTTTCCAATAAGCAGGTGTTTTGCTCATTAAGCATCCACAACCTGCTTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS CCA 72 bp | ACCAGAATGACGCTGAGCGCAGTGTCTGTGGCCCGGTaGCCAAAGCCAGGCGGCAGGGAGAAATTGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: TRMTLSAVSVAR*PKPGGREKLKG Trigger: CCCCTTCAATTTCTCCCTGCCGCCTGGCTTTGGCCACCGGGCCACAGACACTGCGCTCAGCGTCATTCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 ENSMUST00000218342.2 ENSMUST00000220266.2 |
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| CDS CCA 72 bp | CCCAGAAGGAAAGCACTGAGGGGCATGATACCGTACTaGGCCACTATGGCGATGATCACCCCTTTGGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PRRKALRGMIPY*ATMAMITPLGF Trigger: GAAGCCCAAAGGGGTGATCATCGCCATAGTGGCCCAGTACGGTATCATGCCCCTCAGTGCTTTCCTTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 ENSMUST00000218342.2 |
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| CDS TCA 72 bp | CAGATGAGGATGGCCAGAGCCTCAATGCTGGTCAGATaGAAGACCTTGCCCAGAAGGAAAGCACTGAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: QMRMARASMLVR*KTLPRRKALRG Trigger: GCCCCTCAGTGCTTTCCTTCTGGGCAAGGTCTTTCATCTGACCAGCATTGAGGCTCTGGCCATCCTCATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 ENSMUST00000218342.2 |
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| CDS CAA 72 bp | GGGGAAAGGCCAGGTTGTGTAGGAGGATTATTCCCGTaGTGGGTACCTTTTTCCAGAGCTGCTGGAGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: GERPGCVGGLFP*WVPFSRAAGVA Trigger: TGCTACTCCAGCAGCTCTGGAAAAAGGTACCCACAACGGGAATAATCCTCCTACACAACCTGGCCTTTCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS CAA 72 bp | CTGACCAGAGTTCAGGCCATTAGGGGAAAGGCCAGGTaGTGTAGGAGGATTATTCCCGTTGTGGGTACCTTT | + |
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Preference number: 6 (lower is better) Translates to: LTRVQAIRGKAR*CRRIIPVVGTF Trigger: AAAGGTACCCACAACGGGAATAATCCTCCTACACAACCTGGCCTTTCCCCTAATGGCCTGAACTCTGGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS CAA 90 bp | AGGCCATTAGGGGAAAGGCCAGGTTGTGTAGGAGGATTATTCCCGTaGTGGGTACCTTTTTCCAGAGCTGCTGGAGTAGCATCTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: RPLGERPGCVGGLFP*WVPFSRAAGVASSV Trigger: AACAGAAGATGCTACTCCAGCAGCTCTGGAAAAAGGTACCCACAACGGGAATAATCCTCCTACACAACCTGGCCTTTCCCCTAATGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS CAA 90 bp | ATTTGCCATCTGACCAGAGTTCAGGCCATTAGGGGAAAGGCCAGGTaGTGTAGGAGGATTATTCCCGTTGTGGGTACCTTTTTCCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: ICHLTRVQAIRGKAR*CRRIIPVVGTFFQS Trigger: GCTCTGGAAAAAGGTACCCACAACGGGAATAATCCTCCTACACAACCTGGCCTTTCCCCTAATGGCCTGAACTCTGGTCAGATGGCAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS CCA 72 bp | GAAAGGCCAGGTTGTGTAGGAGGATTATTCCCGTTGTaGGTACCTTTTTCCAGAGCTGCTGGAGTAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: ERPGCVGGLFPL*VPFSRAAGVAS Trigger: AGATGCTACTCCAGCAGCTCTGGAAAAAGGTACCCACAACGGGAATAATCCTCCTACACAACCTGGCCTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS GCA 72 bp | AGGATTATTCCCGTTGTGGGTACCTTTTTCCAGAGCTaGTGGAGTAGCATCTTCTGTTGCAGCAGCCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: RIIPVVGTFFQS*WSSIFCCSSLV Trigger: TACAAGGCTGCTGCAACAGAAGATGCTACTCCAGCAGCTCTGGAAAAAGGTACCCACAACGGGAATAATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS CCA 72 bp | ATTATTCCCGTTGTGGGTACCTTTTTCCAGAGCTGCTaGAGTAGCATCTTCTGTTGCAGCAGCCTTGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: IIPVVGTFFQSC*SSIFCCSSLVG Trigger: ACCTACAAGGCTGCTGCAACAGAAGATGCTACTCCAGCAGCTCTGGAAAAAGGTACCCACAACGGGAATAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS CAA 72 bp | GGTGACATTGAGGATGGTAGAACAGAGTTGGACGTTTaGGAATCCTGTTTCCATGCTGATGGTGCGTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GDIEDGRTELDV*ESCFHADGASA Trigger: TGCAGACGCACCATCAGCATGGAAACAGGATTCCAAAACGTCCAACTCTGTTCTACCATCCTCAATGTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 ENSMUST00000218342.2 |
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| CDS TCA 72 bp | AACAGAGTTGGACGTTTTGGAATCCTGTTTCCATGCTaGTGGTGCGTCTGCAGCTTGGATTTAGTCGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: NRVGRFGILFPC*WCVCSLDLVGR Trigger: TCTTCCGACTAAATCCAAGCTGCAGACGCACCATCAGCATGGAAACAGGATTCCAAAACGTCCAACTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 ENSMUST00000218342.2 |
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| CDS GCA 72 bp | ACCTTTTTCCAGAGCTGCTGGAGTAGCATCTTCTGTTaGAGCAGCCTTGTAGGTAATTTTTGTTTGGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: TFFQSCWSSIFC*SSLVGNFCLVL Trigger: AAGGACCAAACAAAAATTACCTACAAGGCTGCTGCAACAGAAGATGCTACTCCAGCAGCTCTGGAAAAAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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| CDS CAA 90 bp | TGGAGTAGCATCTTCTGTTGCAGCAGCCTTGTAGGTAATTTTTGTTaGGTCCTTCTGAGGTTTGATTTTCAAATAGCACCGGAAGATAAT | + |
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Preference number: 6 (lower is better) Translates to: WSSIFCCSSLVGNFC*VLLRFDFQIAPEDN Trigger: ATTATCTTCCGGTGCTATTTGAAAATCAAACCTCAGAAGGACCAAACAAAAATTACCTACAAGGCTGCTGCAACAGAAGATGCTACTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095572.5 ENSMUST00000218162.2 |
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