Pregenerated sensors for SLBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004642Ensembl transcript IDs: ENSMUST00000057551.14, ENSMUST00000075670.13, ENSMUST00000101354.10, ENSMUST00000139518.8, ENSMUST00000151081.2
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCATTCAAGGCCCACACAGTCTACACCTCCACCAGCTCCAGGGATaGCAGGACTACAGAGAAACCCTATCTCCAAAATCTAAACCAAAA | + |
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Preference number: 1 (lower is better) Translates to: CIQGPHSLHLHQLQG*QDYRETLSPKSKPK Trigger: TTTTGGTTTAGATTTTGGAGATAGGGTTTCTCTGTAGTCCTGGCATCCCTGGAGCTGGTGGAGGTGTAGACTGTGTGGGCCTTGAATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139518.8 |
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| 3UTR TCA 90 bp | AATTGGTCCCATAGACACATGGTTAAAATCCACTGCCAACACATCTaGAAAGTGGCAACTGAAGGCTCAAGTTTCCTGTTGTCTAACTTG | + |
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Preference number: 1 (lower is better) Translates to: NWSHRHMVKIHCQHI*KVATEGSSFLLSNL Trigger: CAAGTTAGACAACAGGAAACTTGAGCCTTCAGTTGCCACTTTTCAGATGTGTTGGCAGTGGATTTTAACCATGTGTCTATGGGACCAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| 3UTR-3UTR TCA 90 bp | CAGGGATGCCAGGACTACAGAGAAACCCTATCTCCAAAATCTAAACCAAAACCACCCAAAGCTGTCCTCTaGAGTGCACACACAGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: QGCQDYRETLSPKSKPKPPKAVL*SAHTAN Trigger: ATTGGCTGTGTGTGCACTTCAGAGGACAGCTTTGGG...TGGTTTTGGTTTAGATTTTGGAGATAGGGTTTCTCTGTAGTCCTGGCATCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139518.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCAACTGATTCTAAATTGGTCCCATAGACACATGGTTAAAATCCACTGCCAACTGAAAAGTGGCAACTaGAGGCTCAAGTTTCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: RQLILNWSHRHMVKIHCQLKSGN*RLKFPV Trigger: AACAGGAAACTTGAGCCTTCAGTTGCCACTTTTCAG...TTGGCAGTGGATTTTAACCATGTGTCTATGGGACCAATTTAGAATCAGTTGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| 3UTR-3UTR CCA 90 bp | AATAAGTTTTTACAGAGTCATTGCAGCTGCCTGACTGAGAATTCTTTATCAGTTCAACTGATTCTAAATTaGTCCCATAGACACATGGTT | + |
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Preference number: 2 (lower is better) Translates to: NKFLQSHCSCLTENSLSVQLILN*SHRHMV Trigger: AACCATGTGTCTATGGGACCAATTTAGAATCAGTTG...AACTGATAAAGAATTCTCAGTCAGGCAGCTGCAATGACTCTGTAAAAACTTATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| 3UTR GCA 72 bp | GGCCCACACAGTCTACACCTCCACCAGCTCCAGGGATaGCAGGACTACAGAGAAACCCTATCTCCAAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: GPHSLHLHQLQG*QDYRETLSPKS Trigger: AGATTTTGGAGATAGGGTTTCTCTGTAGTCCTGGCATCCCTGGAGCTGGTGGAGGTGTAGACTGTGTGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139518.8 |
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| 3UTR GCA 72 bp | GATCTCATTACGGATGGCTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCAGGACCTTCGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLITDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAGCCATCCGTAATGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075670.13 |
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| 3UTR CCA 72 bp | CTTTATCAGTTACCTGAAAGGCAACTGATTCTAAATTaGTCCCATAGACACATGGTTAAAATCCACTGCCAA | + |
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Preference number: 3 (lower is better) Translates to: LYQLPERQLILN*SHRHMVKIHCQ Trigger: TTGGCAGTGGATTTTAACCATGTGTCTATGGGACCAATTTAGAATCAGTTGCCTTTCAGGTAACTGATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| 3UTR TCA 72 bp | CAGAAAATAAGTTTTTACAGAGTCATTGCAGCTGCCTaGCTGAGAATTCTTTATCAGTTACCTGAAAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: QKISFYRVIAAA*LRILYQLPERQ Trigger: TTGCCTTTCAGGTAACTGATAAAGAATTCTCAGTCAGGCAGCTGCAATGACTCTGTAAAAACTTATTTTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR TCA 90 bp | AATGCAGAGCAACTCAGGCCTTCCAGGTGGCCAGGCAGAGCCACGTATTTCTCTGGCAGTCCACGTGTCTaGCTTTGGTGGGTGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: NAEQLRPSRWPGRATYFSGSPRV*LWWVCQ Trigger: CTGGCACACCCACCAAAGTCAGACACGTGGACTGCC...AGAGAAATACGTGGCTCTGCCTGGCCACCTGGAAGGCCTGAGTTGCTCTGCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR TCA 90 bp | AAATGCAGAGCAACTCAGGCCTTCCAGGTGGCCAGGCAGAGCCACGTATTTCTCGGCAGTCCACGTGTCTaGCTTTGGTGGGTGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KCRATQAFQVARQSHVFLGSPRV*LWWVCQ Trigger: CTGGCACACCCACCAAAGTCAGACACGTGGACTGCC...GAGAAATACGTGGCTCTGCCTGGCCACCTGGAAGGCCTGAGTTGCTCTGCATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR TCA 90 bp | AAATGCAGAGCAACTCAGGCCTTCCAGGTGGCCAGGCAGAGCCACGTATTTCTCCAGAGCTGCTTTCTGTaGATTCAGTCTCCATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KCRATQAFQVARQSHVFLQSCFL*IQSPFP Trigger: GGGAAATGGAGACTGAATTCACAGAAAGCAGCTCTG...GAGAAATACGTGGCTCTGCCTGGCCACCTGGAAGGCCTGAGTTGCTCTGCATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR TCA 90 bp | AAATGCAGAGCAACTCAGGCCTTCCAGGTGGCCAGGCAGAGCCACGTATTTCTCTCCTGTGAACTTGTCTaGGACTCAGAGCTGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: KCRATQAFQVARQSHVFLSCELV*DSELLS Trigger: AGAAAGCAGCTCTGAGTCTCAGACAAGTTCACAGGA...GAGAAATACGTGGCTCTGCCTGGCCACCTGGAAGGCCTGAGTTGCTCTGCATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR CCA 90 bp | AAATGCAGAGCAACTCAGGCCTTCCAGGTGGCCAGGCAGAGCCACGTATTTCTCCTAGAACGGGGCTTATaGCCTTCAGGAGTTGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: KCRATQAFQVARQSHVFLLERGL*PSGVVK Trigger: CTTTACAACTCCTGAAGGCCATAAGCCCCGTTCTAG...GAGAAATACGTGGCTCTGCCTGGCCACCTGGAAGGCCTGAGTTGCTCTGCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR GCA 90 bp | AGCAACTCAGGCCTTCCAGGTGGCCAGGCAGAGCCACGTATTTCTCTGAGTAACTTCATCTTCTTCAACTaGACTGGCCCAGTCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: SNSGLPGGQAEPRISLSNFIFFN*TGPVRT Trigger: TGTTCTGACTGGGCCAGTGCAGTTGAAGAAGATGAA...GTTACTCAGAGAAATACGTGGCTCTGCCTGGCCACCTGGAAGGCCTGAGTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR CCA 90 bp | AGACAACAAAAACAAATGCAGAGCAACTCAGGCCTTCCAGGTGGCCAGGCAGAGCTAGAACGGGGCTTATaGCCTTCAGGAGTTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RQQKQMQSNSGLPGGQAELERGL*PSGVVK Trigger: CTTTACAACTCCTGAAGGCCATAAGCCCCGTTCTAG...CTCTGCCTGGCCACCTGGAAGGCCTGAGTTGCTCTGCATTTGTTTTTGTTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR TCA 90 bp | AAATGCAGAGCAACTCAGGCCTTCCAGGTGGCCAGGCAGAGCCACGTATTTCTCTCCCAAAGTCGTTTATaGGCAGTTTTCTTTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: KCRATQAFQVARQSHVFLSQSRL*AVFFCT Trigger: GGTACAAAAGAAAACTGCTCATAAACGACTTTGGGA...GAGAAATACGTGGCTCTGCCTGGCCACCTGGAAGGCCTGAGTTGCTCTGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057551.14 |
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| CDS-3UTR TCA 90 bp | AGCAACTCAGGCCTTCCAGGTGGCCAGGCAGAGCCACGTATTTCTCTGAGTAACATCAAAGTTATCCTGTaGACTTGTCTGAGACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SNSGLPGGQAEPRISLSNIKVIL*TCLRLR Trigger: TCTGAGTCTCAGACAAGTTCACAGGATAACTTTGAT...GTTACTCAGAGAAATACGTGGCTCTGCCTGGCCACCTGGAAGGCCTGAGTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR TCA 90 bp | AGATGTACCAAAAGAGGGTATCAGATCTCATTACGGATGGCTGTGAGCCACCATCAGAGCTGCTTTCTGTaGATTCAGTCTCCATTTCCC | + |
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Preference number: 4 (lower is better) Translates to: RCTKRGYQISLRMAVSHHQSCFL*IQSPFP Trigger: GGGAAATGGAGACTGAATTCACAGAAAGCAGCTCTG...ATGGTGGCTCACAGCCATCCGTAATGAGATCTGATACCCTCTTTTGGTACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075670.13 |
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| CDS-3UTR TCA 90 bp | ATGTACCAAAAGAGGGTATCAGATCTCATTACGGATGGCTGTGAGCCACCATGTTCCTGTGAACTTGTCTaGGACTCAGAGCTGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MYQKRVSDLITDGCEPPCSCELV*DSELLS Trigger: AGAAAGCAGCTCTGAGTCTCAGACAAGTTCACAGGA...ACATGGTGGCTCACAGCCATCCGTAATGAGATCTGATACCCTCTTTTGGTACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075670.13 |
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| CDS-3UTR CCA 90 bp | CTTCAGATGTACCAAAAGAGGGTATCAGATCTCATTACGGATGGCTGTGAGCCACTAGAACGGGGCTTATaGCCTTCAGGAGTTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQMYQKRVSDLITDGCEPLERGL*PSGVVK Trigger: CTTTACAACTCCTGAAGGCCATAAGCCCCGTTCTAG...TGGCTCACAGCCATCCGTAATGAGATCTGATACCCTCTTTTGGTACATCTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075670.13 |
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| CDS-3UTR GCA 90 bp | ATGTACCAAAAGAGGGTATCAGATCTCATTACGGATGGCTGTGAGCCACCATGTTTCATCTTCTTCAACTaGACTGGCCCAGTCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: MYQKRVSDLITDGCEPPCFIFFN*TGPVRT Trigger: TGTTCTGACTGGGCCAGTGCAGTTGAAGAAGATGAA...ACATGGTGGCTCACAGCCATCCGTAATGAGATCTGATACCCTCTTTTGGTACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075670.13 |
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| CDS-3UTR GCA 90 bp | AGCTCCAGGGATGCCAGGACTACAGAGAAACCCTATCTCCAAAATCTAAACCAATTCATCTTCTTCAACTaGACTGGCCCAGTCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: SSRDARTTEKPYLQNLNQFIFFN*TGPVRT Trigger: TGTTCTGACTGGGCCAGTGCAGTTGAAGAAGATGAA...TTGGTTTAGATTTTGGAGATAGGGTTTCTCTGTAGTCCTGGCATCCCTGGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139518.8 |
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| CDS-3UTR CCA 90 bp | AGGCAACTGATTCTAAATTGGTCCCATAGACACATGGTTAAAATCCACTGCCAAATTTGTTGGGGGTCCTaGGATGGATTCCAGGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: RQLILNWSHRHMVKIHCQICWGS*DGFQVV Trigger: GACAACCTGGAATCCATCCCAGGACCCCCAACAAAT...TTGGCAGTGGATTTTAACCATGTGTCTATGGGACCAATTTAGAATCAGTTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR CCA 90 bp | CTGATTCTAAATTGGTCCCATAGACACATGGTTAAAATCCACTGCCAACACATCAACTCATCCTCCACTTaGCAGTCCACGTGTCTGACT | + |
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Preference number: 4 (lower is better) Translates to: LILNWSHRHMVKIHCQHINSSST*QSTCLT Trigger: AGTCAGACACGTGGACTGCCAAGTGGAGGATGAGTT...GATGTGTTGGCAGTGGATTTTAACCATGTGTCTATGGGACCAATTTAGAATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR CCA 90 bp | AGGCAACTGATTCTAAATTGGTCCCATAGACACATGGTTAAAATCCACTGCCAAAACTCATCCTCCACTTaGCAGTCCACGTGTCTGACT | + |
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Preference number: 4 (lower is better) Translates to: RQLILNWSHRHMVKIHCQNSSST*QSTCLT Trigger: AGTCAGACACGTGGACTGCCAAGTGGAGGATGAGTT...TTGGCAGTGGATTTTAACCATGTGTCTATGGGACCAATTTAGAATCAGTTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR TCA 90 bp | TTCAGATGTACCAAAAGAGGGTATCAGATCTCATTACGGATGGCTGTGAGCCACTCCCAAAGTCGTTTATaGGCAGTTTTCTTTTGTACC | + |
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Preference number: 4 (lower is better) Translates to: FRCTKRGYQISLRMAVSHSQSRL*AVFFCT Trigger: GGTACAAAAGAAAACTGCTCATAAACGACTTTGGGA...GTGGCTCACAGCCATCCGTAATGAGATCTGATACCCTCTTTTGGTACATCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075670.13 |
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| CDS-3UTR CCA 90 bp | TCAGTGGAAAATAGGCATAAGGCCCTAATTCTGGAATCCAGAATGCATGTCAAACTAGAACGGGGCTTATaGCCTTCAGGAGTTGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: SVENRHKALILESRMHVKLERGL*PSGVVK Trigger: CTTTACAACTCCTGAAGGCCATAAGCCCCGTTCTAG...TTTGACATGCATTCTGGATTCCAGAATTAGGGCCTTATGCCTATTTTCCACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139518.8 |
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| CDS-3UTR TCA 90 bp | AGGCATAAGGCCCTAATTCTGGAATCCAGAATGCATGTCAAAGAAAGCTCACAGTCCCAAAGTCGTTTATaGGCAGTTTTCTTTTGTACC | + |
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Preference number: 4 (lower is better) Translates to: RHKALILESRMHVKESSQSQSRL*AVFFCT Trigger: GGTACAAAAGAAAACTGCTCATAAACGACTTTGGGA...CTGTGAGCTTTCTTTGACATGCATTCTGGATTCCAGAATTAGGGCCTTATGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139518.8 |
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| CDS-3UTR TCA 90 bp | AATAAGTTTTTACAGAGTCATTGCAGCTGCCTGACTGAGAATTCTTTATCAGTTTCCTGTGAACTTGTCTaGGACTCAGAGCTGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: NKFLQSHCSCLTENSLSVSCELV*DSELLS Trigger: AGAAAGCAGCTCTGAGTCTCAGACAAGTTCACAGGA...AACTGATAAAGAATTCTCAGTCAGGCAGCTGCAATGACTCTGTAAAAACTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR TCA 90 bp | CAACTGATTCTAAATTGGTCCCATAGACACATGGTTAAAATCCACTGCCAACACATCAAAGTTATCCTGTaGACTTGTCTGAGACTCAGA | + |
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Preference number: 4 (lower is better) Translates to: QLILNWSHRHMVKIHCQHIKVIL*TCLRLR Trigger: TCTGAGTCTCAGACAAGTTCACAGGATAACTTTGAT...GTGTTGGCAGTGGATTTTAACCATGTGTCTATGGGACCAATTTAGAATCAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR TCA 90 bp | CTGATTCTAAATTGGTCCCATAGACACATGGTTAAAATCCACTGCCAACACATCAGACATAGACTCCTTTaGATCAGAACTTGCAATCTC | + |
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Preference number: 4 (lower is better) Translates to: LILNWSHRHMVKIHCQHIRHRLL*IRTCNL Trigger: GAGATTGCAAGTTCTGATTCAAAGGAGTCTATGTCT...GATGTGTTGGCAGTGGATTTTAACCATGTGTCTATGGGACCAATTTAGAATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101354.10 |
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| CDS-3UTR GCA 90 bp | AATAAGTTTTTACAGAGTCATTGCAGCTGCCTGACTGAGAATTCTTTATCAGTTTTCATCTTCTTCAACTaGACTGGCCCAGTCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: NKFLQSHCSCLTENSLSVFIFFN*TGPVRT Trigger: TGTTCTGACTGGGCCAGTGCAGTTGAAGAAGATGAA...AACTGATAAAGAATTCTCAGTCAGGCAGCTGCAATGACTCTGTAAAAACTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS CCA 90 bp | GAACGGGGCTTATGGCCTTCAGGAGTTGTAAAGCTTTCAGGTCGGTaGTCCGCAGTCTGGAGCTCGCCTTCCTCGGAGTCCTCGGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ERGLWPSGVVKLSGR*SAVWSSPSSESSGF Trigger: GAAGCCCGAGGACTCCGAGGAAGGCGAGCTCCAGACTGCGGACCACCGACCTGAAAGCTTTACAACTCCTGAAGGCCATAAGCCCCGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057551.14 ENSMUST00000075670.13 ENSMUST00000101354.10 ENSMUST00000139518.8 |
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| CDS CCA 90 bp | TCTTCAACTGCACTGGCCCAGTCAGAACATCTAGAACGGGGCTTATaGCCTTCAGGAGTTGTAAAGCTTTCAGGTCGGTGGTCCGCAGTC | + |
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Preference number: 5 (lower is better) Translates to: SSTALAQSEHLERGL*PSGVVKLSGRWSAV Trigger: GACTGCGGACCACCGACCTGAAAGCTTTACAACTCCTGAAGGCCATAAGCCCCGTTCTAGATGTTCTGACTGGGCCAGTGCAGTTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057551.14 ENSMUST00000075670.13 ENSMUST00000101354.10 ENSMUST00000139518.8 |
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| CDS-3UTR CAA 90 bp | AGACAACAAAAACAAATGCAGAGCAACTCAGGCCTTCCAGGTGGCCAGGCAGAGTCCACGTGTCTGACTTaGGTGGGTGTGCCAGCATAC | + |
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Preference number: 5 (lower is better) Translates to: RQQKQMQSNSGLPGGQAESTCLT*VGVPAY Trigger: GTATGCTGGCACACCCACCAAAGTCAGACACGTGGA...CTCTGCCTGGCCACCTGGAAGGCCTGAGTTGCTCTGCATTTGTTTTTGTTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR CAA 90 bp | AGACAACAAAAACAAATGCAGAGCAACTCAGGCCTTCCAGGTGGCCAGGCAGAGAAACTCATCCTCCACTaGGCAGTCCACGTGTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: RQQKQMQSNSGLPGGQAEKLILH*AVHVSD Trigger: GTCAGACACGTGGACTGCCAAGTGGAGGATGAGTTT...CTCTGCCTGGCCACCTGGAAGGCCTGAGTTGCTCTGCATTTGTTTTTGTTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS TCA 90 bp | GAGCCATCTCTCCAGCCCCCGGTGTGTCTGGTTAAAGTTATCCTGTaGACTTGTCTGAGACTCAGAGCTGCTTTCTGTGAATTCAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: EPSLQPPVCLVKVIL*TCLRLRAAFCEFSL Trigger: GAGACTGAATTCACAGAAAGCAGCTCTGAGTCTCAGACAAGTTCACAGGATAACTTTAACCAGACACACCGGGGGCTGGAGAGATGGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075670.13 |
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| CDS-3UTR CAA 90 bp | AATGCAGAGCAACTCAGGCCTTCCAGGTGGCCAGGCAGAGCCACGTATTTCTCTTACCTTGCAATCTCTTaGTTAACTCTGGTCCTCATT | + |
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Preference number: 5 (lower is better) Translates to: NAEQLRPSRWPGRATYFSYLAIS*LTLVLI Trigger: AATGAGGACCAGAGTTAACAAAGAGATTGCAAGGTA...AGAGAAATACGTGGCTCTGCCTGGCCACCTGGAAGGCCTGAGTTGCTCTGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057551.14 |
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| CDS-3UTR CAA 90 bp | AAATGCAGAGCAACTCAGGCCTTCCAGGTGGCCAGGCAGAGCCACGTATTTCTCCCCAAGATCTACAGGTaGTATTTCTTGCAAATCACA | + |
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Preference number: 5 (lower is better) Translates to: KCRATQAFQVARQSHVFLPKIYR*YFLQIT Trigger: TGTGATTTGCAAGAAATACAACCTGTAGATCTTGGG...GAGAAATACGTGGCTCTGCCTGGCCACCTGGAAGGCCTGAGTTGCTCTGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS TCA 90 bp | CCAAAAATGCAAAGCCACCTTCCAGAGTTTAATTTGTTGGTCCCATaGCCGCCGGCTGTACTTCTTAAATTTGTTGGGGGTCCTGGGATG | + |
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Preference number: 5 (lower is better) Translates to: PKMQSHLPEFNLLVP*PPAVLLKFVGGPGM Trigger: CATCCCAGGACCCCCAACAAATTTAAGAAGTACAGCCGGCGGTCATGGGACCAACAAATTAAACTCTGGAAGGTGGCTTTGCATTTTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000057551.14 ENSMUST00000075670.13 ENSMUST00000101354.10 ENSMUST00000139518.8 |
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| CDS TCA 90 bp | AAGCTTCCAAATCAAACTCATCCTCCACTTGGCAGTCCACGTGTCTaGCTTTGGTGGGTGTGCCAGCATACACATCAAAGTTATCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: KLPNQTHPPLGSPRV*LWWVCQHTHQSYPV Trigger: CACAGGATAACTTTGATGTGTATGCTGGCACACCCACCAAAGTCAGACACGTGGACTGCCAAGTGGAGGATGAGTTTGATTTGGAAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR CAA 90 bp | AAATGCAGAGCAACTCAGGCCTTCCAGGTGGCCAGGCAGAGCCACGTATTTCTCATGAGCAGTTTTCTTTaGTACCTTGCAATCTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: KCRATQAFQVARQSHVFLMSSFL*YLAISL Trigger: CAAAGAGATTGCAAGGTACAAAAGAAAACTGCTCAT...GAGAAATACGTGGCTCTGCCTGGCCACCTGGAAGGCCTGAGTTGCTCTGCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057551.14 |
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| CDS-3UTR CAA 90 bp | CCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCAGTGATGAGCAGTTTTCTTTaGTACCTTGCAATCTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: PPCGCWDLNSGPSEEQSVMSSFL*YLAISL Trigger: CAAAGAGATTGCAAGGTACAAAAGAAAACTGCTCAT...CACTGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075670.13 |
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| CDS-3UTR CAA 90 bp | ACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCAGTGCTCCCAAGATCTACAGGTaGTATTTCTTGCAAATCACA | + |
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Preference number: 5 (lower is better) Translates to: TMWLLGFELRTFGRAVSAPKIYR*YFLQIT Trigger: TGTGATTTGCAAGAAATACAACCTGTAGATCTTGGG...AGCACTGACTGCTCTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075670.13 |
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| CDS-3UTR CAA 90 bp | CAACTGATTCTAAATTGGTCCCATAGACACATGGTTAAAATCCACTGCCAACACTCCACGTGTCTGACTTaGGTGGGTGTGCCAGCATAC | + |
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Preference number: 5 (lower is better) Translates to: QLILNWSHRHMVKIHCQHSTCLT*VGVPAY Trigger: GTATGCTGGCACACCCACCAAAGTCAGACACGTGGA...GTGTTGGCAGTGGATTTTAACCATGTGTCTATGGGACCAATTTAGAATCAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR CAA 90 bp | AGACAACAAAAACAAATGCAGAGCAACTCAGGCCTTCCAGGTGGCCAGGCAGAGGAACTTGCAATCTCTTaGTTAACTCTGGTCCTCATT | + |
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Preference number: 5 (lower is better) Translates to: RQQKQMQSNSGLPGGQAEELAIS*LTLVLI Trigger: AATGAGGACCAGAGTTAACAAAGAGATTGCAAGTTC...CTCTGCCTGGCCACCTGGAAGGCCTGAGTTGCTCTGCATTTGTTTTTGTTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101354.10 |
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| CDS-3UTR CAA 90 bp | GTAGCTGTCTTCAGATGTACCAAAAGAGGGTATCAGATCTCATTACGGATGGCTCTGTACTTCTTAAATTaGTTGGGGGTCCTGGGATGG | + |
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Preference number: 5 (lower is better) Translates to: VAVFRCTKRGYQISLRMALYFLN*LGVLGW Trigger: CCATCCCAGGACCCCCAACAAATTTAAGAAGTACAG...AGCCATCCGTAATGAGATCTGATACCCTCTTTTGGTACATCTGAAGACAGCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075670.13 |
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| CDS-3UTR CAA 90 bp | AGATGTACCAAAAGAGGGTATCAGATCTCATTACGGATGGCTGTGAGCCACCATTACCTTGCAATCTCTTaGTTAACTCTGGTCCTCATT | + |
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Preference number: 5 (lower is better) Translates to: RCTKRGYQISLRMAVSHHYLAIS*LTLVLI Trigger: AATGAGGACCAGAGTTAACAAAGAGATTGCAAGGTA...ATGGTGGCTCACAGCCATCCGTAATGAGATCTGATACCCTCTTTTGGTACATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075670.13 |
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| CDS-3UTR CAA 90 bp | AGGCAACTGATTCTAAATTGGTCCCATAGACACATGGTTAAAATCCACTGCCAACTGTACTTCTTAAATTaGTTGGGGGTCCTGGGATGG | + |
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Preference number: 5 (lower is better) Translates to: RQLILNWSHRHMVKIHCQLYFLN*LGVLGW Trigger: CCATCCCAGGACCCCCAACAAATTTAAGAAGTACAG...TTGGCAGTGGATTTTAACCATGTGTCTATGGGACCAATTTAGAATCAGTTGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR CAA 90 bp | CAACTGATTCTAAATTGGTCCCATAGACACATGGTTAAAATCCACTGCCAACACCTGTACTTCTTAAATTaGTTGGGGGTCCTGGGATGG | + |
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Preference number: 5 (lower is better) Translates to: QLILNWSHRHMVKIHCQHLYFLN*LGVLGW Trigger: CCATCCCAGGACCCCCAACAAATTTAAGAAGTACAG...GTGTTGGCAGTGGATTTTAACCATGTGTCTATGGGACCAATTTAGAATCAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR CAA 90 bp | CTAAATACAGAACAGGAGGTAAACTCCTCCCTGGCATCCACAACTCTGTGTAATTACCTTGCAATCTCTTaGTTAACTCTGGTCCTCATT | + |
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Preference number: 5 (lower is better) Translates to: LNTEQEVNSSLASTTLCNYLAIS*LTLVLI Trigger: AATGAGGACCAGAGTTAACAAAGAGATTGCAAGGTA...ATTACACAGAGTTGTGGATGCCAGGGAGGAGTTTACCTCCTGTTCTGTATTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139518.8 |
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| CDS-3UTR CAA 90 bp | AATAAGTTTTTACAGAGTCATTGCAGCTGCCTGACTGAGAATTCTTTATCAGTTAAACTCATCCTCCACTaGGCAGTCCACGTGTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: NKFLQSHCSCLTENSLSVKLILH*AVHVSD Trigger: GTCAGACACGTGGACTGCCAAGTGGAGGATGAGTTT...AACTGATAAAGAATTCTCAGTCAGGCAGCTGCAATGACTCTGTAAAAACTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS-3UTR CAA 90 bp | CAATATAGTAACAAACACAACAAACGTGAGAACCTGCCTCAAACAGGTATAAAGCTGTACTTCTTAAATTaGTTGGGGGTCCTGGGATGG | + |
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Preference number: 5 (lower is better) Translates to: QYSNKHNKRENLPQTGIKLYFLN*LGVLGW Trigger: CCATCCCAGGACCCCCAACAAATTTAAGAAGTACAG...CTTTATACCTGTTTGAGGCAGGTTCTCACGTTTGTTGTGTTTGTTACTATATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139518.8 |
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| CDS-3UTR CAA 90 bp | CTGATTCTAAATTGGTCCCATAGACACATGGTTAAAATCCACTGCCAACACATCCCCAAGATCTACAGGTaGTATTTCTTGCAAATCACA | + |
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Preference number: 5 (lower is better) Translates to: LILNWSHRHMVKIHCQHIPKIYR*YFLQIT Trigger: TGTGATTTGCAAGAAATACAACCTGTAGATCTTGGG...GATGTGTTGGCAGTGGATTTTAACCATGTGTCTATGGGACCAATTTAGAATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS CCA 72 bp | TTATGGCCTTCAGGAGTTGTAAAGCTTTCAGGTCGGTaGTCCGCAGTCTGGAGCTCGCCTTCCTCGGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LWPSGVVKLSGR*SAVWSSPSSES Trigger: GGACTCCGAGGAAGGCGAGCTCCAGACTGCGGACCACCGACCTGAAAGCTTTACAACTCCTGAAGGCCATAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057551.14 ENSMUST00000075670.13 ENSMUST00000101354.10 ENSMUST00000139518.8 |
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| CDS CCA 72 bp | GCACTGGCCCAGTCAGAACATCTAGAACGGGGCTTATaGCCTTCAGGAGTTGTAAAGCTTTCAGGTCGGTGG | + |
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Preference number: 6 (lower is better) Translates to: ALAQSEHLERGL*PSGVVKLSGRW Trigger: CCACCGACCTGAAAGCTTTACAACTCCTGAAGGCCATAAGCCCCGTTCTAGATGTTCTGACTGGGCCAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057551.14 ENSMUST00000075670.13 ENSMUST00000101354.10 ENSMUST00000139518.8 |
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| CDS CAA 72 bp | TGTTGGTCCCATGACCGCCGGCTGTACTTCTTAAATTaGTTGGGGGTCCTGGGATGGATTCCAGGTTGTCGC | + |
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Preference number: 6 (lower is better) Translates to: CWSHDRRLYFLN*LGVLGWIPGCR Trigger: GCGACAACCTGGAATCCATCCCAGGACCCCCAACAAATTTAAGAAGTACAGCCGGCGGTCATGGGACCAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000057551.14 ENSMUST00000075670.13 ENSMUST00000101354.10 ENSMUST00000139518.8 |
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| CDS CAA 72 bp | AACTCATCCTCCACTTGGCAGTCCACGTGTCTGACTTaGGTGGGTGTGCCAGCATACACATCAAAGTTATCC | + |
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Preference number: 6 (lower is better) Translates to: NSSSTWQSTCLT*VGVPAYTSKLS Trigger: GGATAACTTTGATGTGTATGCTGGCACACCCACCAAAGTCAGACACGTGGACTGCCAAGTGGAGGATGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS TCA 72 bp | AATCAAACTCATCCTCCACTTGGCAGTCCACGTGTCTaGCTTTGGTGGGTGTGCCAGCATACACATCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: NQTHPPLGSPRV*LWWVCQHTHQS Trigger: ACTTTGATGTGTATGCTGGCACACCCACCAAAGTCAGACACGTGGACTGCCAAGTGGAGGATGAGTTTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS CCA 72 bp | GTTAAACAAGCTTCCAAATCAAACTCATCCTCCACTTaGCAGTCCACGTGTCTGACTTTGGTGGGTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: VKQASKSNSSST*QSTCLTLVGVP Trigger: TGGCACACCCACCAAAGTCAGACACGTGGACTGCCAAGTGGAGGATGAGTTTGATTTGGAAGCTTGTTTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS CAA 72 bp | CTTAAATTTGTTGGGGGTCCTGGGATGGATTCCAGGTaGTCGCAGGTGTCTGGGCACCTCTTTAATATATCG | + |
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Preference number: 6 (lower is better) Translates to: LKFVGGPGMDSR*SQVSGHLFNIS Trigger: CGATATATTAAAGAGGTGCCCAGACACCTGCGACAACCTGGAATCCATCCCAGGACCCCCAACAAATTTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000057551.14 ENSMUST00000075670.13 ENSMUST00000101354.10 ENSMUST00000139518.8 |
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| CDS CAA 90 bp | TCCAAATCAAACTCATCCTCCACTTGGCAGTCCACGTGTCTGACTTaGGTGGGTGTGCCAGCATACACATCAAAGTTATCCTGTGAACTT | + |
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Preference number: 6 (lower is better) Translates to: SKSNSSSTWQSTCLT*VGVPAYTSKLSCEL Trigger: AAGTTCACAGGATAACTTTGATGTGTATGCTGGCACACCCACCAAAGTCAGACACGTGGACTGCCAAGTGGAGGATGAGTTTGATTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057551.14 ENSMUST00000101354.10 |
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| CDS TCA 72 bp | CAAAGCCACCTTCCAGAGTTTAATTTGTTGGTCCCATaGCCGCCGGCTGTACTTCTTAAATTTGTTGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: QSHLPEFNLLVP*PPAVLLKFVGG Trigger: ACCCCCAACAAATTTAAGAAGTACAGCCGGCGGTCATGGGACCAACAAATTAAACTCTGGAAGGTGGCTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000057551.14 ENSMUST00000075670.13 ENSMUST00000101354.10 ENSMUST00000139518.8 |
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| CDS CCA 72 bp | CAAAAATGCAAAGCCACCTTCCAGAGTTTAATTTGTTaGTCCCATGACCGCCGGCTGTACTTCTTAAATTTG | + |
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Preference number: 6 (lower is better) Translates to: QKCKATFQSLIC*SHDRRLYFLNL Trigger: CAAATTTAAGAAGTACAGCCGGCGGTCATGGGACCAACAAATTAAACTCTGGAAGGTGGCTTTGCATTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000057551.14 ENSMUST00000075670.13 ENSMUST00000101354.10 ENSMUST00000139518.8 |
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| CDS TCA 72 bp | CCGATGATGACTTCCTCTCTCTCCCAAAGTCGTTTATaGGCAGTTTTCTTTTGTACCTTGCAATCTCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: PMMTSSLSQSRL*AVFFCTLQSLC Trigger: ACAAAGAGATTGCAAGGTACAAAAGAAAACTGCTCATAAACGACTTTGGGAGAGAGAGGAAGTCATCATCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057551.14 ENSMUST00000075670.13 ENSMUST00000139518.8 ENSMUST00000151081.2 |
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| CDS CAA 72 bp | CTCTCTCTCCCAAAGTCGTTTATGAGCAGTTTTCTTTaGTACCTTGCAATCTCTTTGTTAACTCTGGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LSLPKSFMSSFL*YLAISLLTLVL Trigger: GAGGACCAGAGTTAACAAAGAGATTGCAAGGTACAAAAGAAAACTGCTCATAAACGACTTTGGGAGAGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057551.14 ENSMUST00000075670.13 ENSMUST00000139518.8 ENSMUST00000151081.2 |
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