Pregenerated sensors for SLAMF8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053318Ensembl transcript IDs: ENSMUST00000065679.8
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCCGACTTGTGGCAGTTATGAGGATCCTGGAGGTGTCCAGGTGTaGAGCATCACGTGGCTGAGCAGGGCATCTCATCATGGTCCAAGC | + |
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Preference number: 1 (lower is better) Translates to: RPTCGSYEDPGGVQV*SITWLSRASHHGPS Trigger: GCTTGGACCATGATGAGATGCCCTGCTCAGCCACGTGATGCTCCACACCTGGACACCTCCAGGATCCTCATAACTGCCACAAGTCGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR CCA 90 bp | GGCAGTTATGAGGATCCTGGAGGTGTCCAGGTGTGGAGCATCACGTaGCTGAGCAGGGCATCTCATCATGGTCCAAGCACCAGTTTATGT | + |
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Preference number: 1 (lower is better) Translates to: GSYEDPGGVQVWSIT*LSRASHHGPSTSLC Trigger: ACATAAACTGGTGCTTGGACCATGATGAGATGCCCTGCTCAGCCACGTGATGCTCCACACCTGGACACCTCCAGGATCCTCATAACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR CCA 90 bp | TTCCATGTTAGTTCAAACATCTCATCTCTCTTTGAGCCAAGGTCCTaGCCTGGAGGCCGTCCCTTGGTGGCTGTTGGGCAAGACCTTATG | + |
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Preference number: 1 (lower is better) Translates to: FHVSSNISSLFEPRS*PGGRPLVAVGQDLM Trigger: CATAAGGTCTTGCCCAACAGCCACCAAGGGACGGCCTCCAGGCCAGGACCTTGGCTCAAAGAGAGATGAGATGTTTGAACTAACATGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR TCA 90 bp | TGGATAATCAATGTCTCTGTGGATCCTAGAGAAAGTCCTGTGTTCTaGAGGAAGCATCCTACTAGTTCACCTTGCCCAGAGAGGATCCGG | + |
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Preference number: 1 (lower is better) Translates to: WIINVSVDPRESPVF*RKHPTSSPCPERIR Trigger: CCGGATCCTCTCTGGGCAAGGTGAACTAGTAGGATGCTTCCTTCAGAACACAGGACTTTCTCTAGGATCCACAGAGACATTGATTATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR CCA 90 bp | CTGTTGGGCAAGACCTTATGTACAGTGATAGAAGAATGGATGCCTTaGATAATCAATGTCTCTGTGGATCCTAGAGAAAGTCCTGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: LLGKTLCTVIEEWMP*IINVSVDPRESPVF Trigger: GAACACAGGACTTTCTCTAGGATCCACAGAGACATTGATTATCCAAGGCATCCATTCTTCTATCACTGTACATAAGGTCTTGCCCAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR TCA 90 bp | ACATTAGCTACCAACCCCTCATCATCTGTAATCTCAATTTACTTTTaGTGGCCCTTGAACTCAGATAATCTTAAAGTCCTTCAGACCAGA | + |
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Preference number: 1 (lower is better) Translates to: TLATNPSSSVISIYF*WPLNSDNLKVLQTR Trigger: TCTGGTCTGAAGGACTTTAAGATTATCTGAGTTCAAGGGCCATCAAAAGTAAATTGAGATTACAGATGATGAGGGGTTGGTAGCTAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTTCAGACCAGAAAGAGAATGCCCCACCCTCCATCATTTCCTGTTCTTTGAAGTTTGGGCCAGGGTaGCGTTCCAGGATGGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: SPSDQKENAPPSIISCSLKFGPG*RSRMVV Trigger: AACCACCATCCTGGAACGTCACCCTGGCCCAAACTT...CAAAGAACAGGAAATGATGGAGGGTGGGGCATTCTCTTTCTGGTCTGAAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTTCAGACCAGAAAGAGAATGCCCCACCCTCCATCATTTCCTGTTCTTTGTCCCTTGGTGGCTGTTaGGCAAGACCTTATGTACAG | + |
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Preference number: 2 (lower is better) Translates to: SPSDQKENAPPSIISCSLSLGGC*ARPYVQ Trigger: CTGTACATAAGGTCTTGCCCAACAGCCACCAAGGGA...CAAAGAACAGGAAATGATGGAGGGTGGGGCATTCTCTTTCTGGTCTGAAGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR-3UTR CCA 90 bp | GACCTTATGTACAGTGATAGAAGAATGGATGCCTTGGATAATCAATGTCTCTGTGGAGGTGTCCAGGTGTaGAGCATCACGTGGCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: DLMYSDRRMDALDNQCLCGGVQV*SITWLS Trigger: GCTCAGCCACGTGATGCTCCACACCTGGACACCTCC...ACAGAGACATTGATTATCCAAGGCATCCATTCTTCTATCACTGTACATAAGGTC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAGCTACCAACCCCTCATCATCTGTAATCTCAATTTACTTTTGATGGCCCTTTTTGAGCCAAGGTCCTaGCCTGGAGGCCGTCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: ISYQPLIICNLNLLLMALFEPRS*PGGRPL Trigger: CAAGGGACGGCCTCCAGGCCAGGACCTTGGCTCAAA...AAGGGCCATCAAAAGTAAATTGAGATTACAGATGATGAGGGGTTGGTAGCTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR CAA 90 bp | CATCTTGAACACAAGGAACTCAGACCCCAGGGGCTGGAGTTGGAGTaGGCAATGGTTAGCTCAATTTCCATGTTAGTTCAAACATCTCAT | + |
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Preference number: 2 (lower is better) Translates to: HLEHKELRPQGLELE*AMVSSISMLVQTSH Trigger: ATGAGATGTTTGAACTAACATGGAAATTGAGCTAACCATTGCCAACTCCAACTCCAGCCCCTGGGGTCTGAGTTCCTTGTGTTCAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTACAGTGATAGAAGAATGGATGCCTTGGATAATCAATGTCTCTGTGGATCCGACGTTCCAGGATGGTaGTTTTCTTGGCTGTCCGCT | + |
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Preference number: 2 (lower is better) Translates to: MYSDRRMDALDNQCLCGSDVPGW*FSWLSA Trigger: AGCGGACAGCCAAGAAAACCACCATCCTGGAACGTC...GGATCCACAGAGACATTGATTATCCAAGGCATCCATTCTTCTATCACTGTACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR-3UTR CCA 90 bp | CTTATGTACAGTGATAGAAGAATGGATGCCTTGGATAATCAATGTCTCTGTGGAGGTGACGTTCCAGGATaGTGGTTTTCTTGGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: LMYSDRRMDALDNQCLCGGDVPG*WFSWLS Trigger: GGACAGCCAAGAAAACCACCATCCTGGAACGTCACC...TCCACAGAGACATTGATTATCCAAGGCATCCATTCTTCTATCACTGTACATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR-3UTR CCA 90 bp | GCTACCAGAAAAATGGCTTTGATCCCAACATGGCACATTAGCTACCAACCCCTCAGTTGGAGTTGGCAATaGTTAGCTCAATTTCCATGT | + |
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Preference number: 2 (lower is better) Translates to: ATRKMALIPTWHISYQPLSWSWQ*LAQFPC Trigger: ACATGGAAATTGAGCTAACCATTGCCAACTCCAACT...GAGGGGTTGGTAGCTAATGTGCCATGTTGGGATCAAAGCCATTTTTCTGGTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR-3UTR GCA 90 bp | CAACCCCTCATCATCTGTAATCTCAATTTACTTTTGATGGCCCTTGAACTCAGAAGACCAGAAAGAGAATaGCCCACCCTCCATCATTTC | + |
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Preference number: 2 (lower is better) Translates to: QPLIICNLNLLLMALELRRPERE*PTLHHF Trigger: GAAATGATGGAGGGTGGGGCATTCTCTTTCTGGTCT...TCTGAGTTCAAGGGCCATCAAAAGTAAATTGAGATTACAGATGATGAGGGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAGCTACCAACCCCTCATCATCTGTAATCTCAATTTACTTTTGATGGCCCTTCTTATAATAACATCTTaGACACAAGGAACTCAGACC | + |
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Preference number: 2 (lower is better) Translates to: ISYQPLIICNLNLLLMALLIITS*TQGTQT Trigger: GGTCTGAGTTCCTTGTGTTCAAGATGTTATTATAAG...AAGGGCCATCAAAAGTAAATTGAGATTACAGATGATGAGGGGTTGGTAGCTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR CCA 72 bp | GAGGATCCTGGAGGTGTCCAGGTGTGGAGCATCACGTaGCTGAGCAGGGCATCTCATCATGGTCCAAGCACC | + |
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Preference number: 3 (lower is better) Translates to: EDPGGVQVWSIT*LSRASHHGPST Trigger: GGTGCTTGGACCATGATGAGATGCCCTGCTCAGCCACGTGATGCTCCACACCTGGACACCTCCAGGATCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR TCA 72 bp | ATCCTGGAGGTGTCCAGGTGTGGAGCATCACGTGGCTaGGCAGGGCATCTCATCATGGTCCAAGCACCAGTT | + |
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Preference number: 3 (lower is better) Translates to: ILEVSRCGASRG*AGHLIMVQAPV Trigger: AACTGGTGCTTGGACCATGATGAGATGCCCTGCTCAGCCACGTGATGCTCCACACCTGGACACCTCCAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR CCA 72 bp | TGTGGCAGTTATGAGGATCCTGGAGGTGTCCAGGTGTaGAGCATCACGTGGCTGAGCAGGGCATCTCATCAT | + |
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Preference number: 3 (lower is better) Translates to: CGSYEDPGGVQV*SITWLSRASHH Trigger: ATGATGAGATGCCCTGCTCAGCCACGTGATGCTCCACACCTGGACACCTCCAGGATCCTCATAACTGCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR CCA 72 bp | AGTTCAAACATCTCATCTCTCTTTGAGCCAAGGTCCTaGCCTGGAGGCCGTCCCTTGGTGGCTGTTGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: SSNISSLFEPRS*PGGRPLVAVGQ Trigger: TTGCCCAACAGCCACCAAGGGACGGCCTCCAGGCCAGGACCTTGGCTCAAAGAGAGATGAGATGTTTGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR-3UTR CAA 90 bp | GTCCTTCAGACCAGAAAGAGAATGCCCCACCCTCCATCATTTCCTGTTCTTTGCGAGGAAGGAGGAAGTTaGGGCCAGGGTGACGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: VLQTRKRMPHPPSFPVLCEEGGS*GQGDVP Trigger: TGGAACGTCACCCTGGCCCAAACTTCCTCCTTCCTC...GCAAAGAACAGGAAATGATGGAGGGTGGGGCATTCTCTTTCTGGTCTGAAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR CCA 72 bp | GTGGAGCATCACGTGGCTGAGCAGGGCATCTCATCATaGTCCAAGCACCAGTTTATGTTGTCCCTCATGACA | + |
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Preference number: 3 (lower is better) Translates to: VEHHVAEQGISS*SKHQFMLSLMT Trigger: TGTCATGAGGGACAACATAAACTGGTGCTTGGACCATGATGAGATGCCCTGCTCAGCCACGTGATGCTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR-3UTR CAA 90 bp | AGTCCTTCAGACCAGAAAGAGAATGCCCCACCCTCCATCATTTCCTGTTCTTTGACATCTCATCTCTCTTaGAGCCAAGGTCCTGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: SPSDQKENAPPSIISCSLTSHLS*SQGPGL Trigger: CAGGCCAGGACCTTGGCTCAAAGAGAGATGAGATGT...CAAAGAACAGGAAATGATGGAGGGTGGGGCATTCTCTTTCTGGTCTGAAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR CCA 72 bp | AACATCTTGAACACAAGGAACTCAGACCCCAGGGGCTaGAGTTGGAGTTGGCAATGGTTAGCTCAATTTCCA | + |
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Preference number: 3 (lower is better) Translates to: NILNTRNSDPRG*SWSWQWLAQFP Trigger: TGGAAATTGAGCTAACCATTGCCAACTCCAACTCCAGCCCCTGGGGTCTGAGTTCCTTGTGTTCAAGATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR TCA 72 bp | AATGTCTCTGTGGATCCTAGAGAAAGTCCTGTGTTCTaGAGGAAGCATCCTACTAGTTCACCTTGCCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: NVSVDPRESPVF*RKHPTSSPCPE Trigger: CTCTGGGCAAGGTGAACTAGTAGGATGCTTCCTTCAGAACACAGGACTTTCTCTAGGATCCACAGAGACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR CCA 72 bp | CTGTTGGGCAAGACCTTATGTACAGTGATAGAAGAATaGATGCCTTGGATAATCAATGTCTCTGTGGATCCT | + |
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Preference number: 3 (lower is better) Translates to: LLGKTLCTVIEE*MPWIINVSVDP Trigger: AGGATCCACAGAGACATTGATTATCCAAGGCATCCATTCTTCTATCACTGTACATAAGGTCTTGCCCAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR CCA 72 bp | TATAGTGCTACCAGAAAAATGGCTTTGATCCCAACATaGCACATTAGCTACCAACCCCTCATCATCTGTAAT | + |
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Preference number: 3 (lower is better) Translates to: YSATRKMALIPT*HISYQPLIICN Trigger: ATTACAGATGATGAGGGGTTGGTAGCTAATGTGCCATGTTGGGATCAAAGCCATTTTTCTGGTAGCACTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR CCA 72 bp | AAGACCTTATGTACAGTGATAGAAGAATGGATGCCTTaGATAATCAATGTCTCTGTGGATCCTAGAGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: KTLCTVIEEWMP*IINVSVDPRES Trigger: ACTTTCTCTAGGATCCACAGAGACATTGATTATCCAAGGCATCCATTCTTCTATCACTGTACATAAGGTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR TCA 72 bp | ACCAACCCCTCATCATCTGTAATCTCAATTTACTTTTaGTGGCCCTTGAACTCAGATAATCTTAAAGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: TNPSSSVISIYF*WPLNSDNLKVL Trigger: AAGGACTTTAAGATTATCTGAGTTCAAGGGCCATCAAAAGTAAATTGAGATTACAGATGATGAGGGGTTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR GCA 90 bp | CTCTTTGAGCCAAGGTCCTGGCCTGGAGGCCGTCCCTTGGTGGCTGTTGGGCAAGAGCAGAGGCCATGGTaGCATGCCCCAAAGAGACCA | + |
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Preference number: 4 (lower is better) Translates to: LFEPRSWPGGRPLVAVGQEQRPW*HAPKRP Trigger: TGGTCTCTTTGGGGCATGGCACCATGGCCTCTGCTC...TTGCCCAACAGCCACCAAGGGACGGCCTCCAGGCCAGGACCTTGGCTCAAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR CCA 90 bp | CTCTTTGAGCCAAGGTCCTGGCCTGGAGGCCGTCCCTTGGTGGCTGTTGGGCAAATAGCCTCACGCACTTaGAAGCCCGGAGGACACTCG | + |
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Preference number: 4 (lower is better) Translates to: LFEPRSWPGGRPLVAVGQIASRT*KPGGHS Trigger: CGAGTGTCCTCCGGGCTTCCAAGTGCGTGAGGCTAT...TTGCCCAACAGCCACCAAGGGACGGCCTCCAGGCCAGGACCTTGGCTCAAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR GCA 90 bp | TCCTGGAGGTGTCCAGGTGTGGAGCATCACGTGGCTGAGCAGGGCATCTCATCAGAGGCCATGGTGCCATaGCCCAAAGAGACCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SWRCPGVEHHVAEQGISSEAMVP*PKETSQ Trigger: CTGGCTGGTCTCTTTGGGGCATGGCACCATGGCCTC...TGATGAGATGCCCTGCTCAGCCACGTGATGCTCCACACCTGGACACCTCCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR TCA 90 bp | GAGGCAGGCCGACTTGTGGCAGTTATGAGGATCCTGGAGGTGTCCAGGTGTGGATGTAGGTTATGTCACTaGTGTTGGGGGCCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: EAGRLVAVMRILEVSRCGCRLCH*CWGPSR Trigger: CCTGCTGGGCCCCCAACATCAGTGACATAACCTACA...TCCACACCTGGACACCTCCAGGATCCTCATAACTGCCACAAGTCGGCCTGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR TCA 90 bp | TCCTGGAGGTGTCCAGGTGTGGAGCATCACGTGGCTGAGCAGGGCATCTCATCACAGGACAAGAAGACCTaGCAGGTATTGAGGGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SWRCPGVEHHVAEQGISSQDKKT*QVLRGW Trigger: CCAACCCCTCAATACCTGTCAGGTCTTCTTGTCCTG...TGATGAGATGCCCTGCTCAGCCACGTGATGCTCCACACCTGGACACCTCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR CCA 90 bp | TGGAGCATCACGTGGCTGAGCAGGGCATCTCATCATGGTCCAAGCACCAGTTTACAGGAGCTCCTCCGATaGCCACAGAGATCGCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: WSITWLSRASHHGPSTSLQELLR*PQRSPD Trigger: ATCTGGCGATCTCTGTGGCCATCGGAGGAGCTCCTG...TAAACTGGTGCTTGGACCATGATGAGATGCCCTGCTCAGCCACGTGATGCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR CAA 72 bp | CAAGGTCCTGGCCTGGAGGCCGTCCCTTGGTGGCTGTaGGGCAAGACCTTATGTACAGTGATAGAAGAATGG | + |
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Preference number: 4 (lower is better) Translates to: QGPGLEAVPWWL*GKTLCTVIEEW Trigger: CCATTCTTCTATCACTGTACATAAGGTCTTGCCCAACAGCCACCAAGGGACGGCCTCCAGGCCAGGACCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR GCA 90 bp | CGACTTGTGGCAGTTATGAGGATCCTGGAGGTGTCCAGGTGTGGAGCATCACGTGAAGCACCCCGTCAGTaGAAGCATCCTTCTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RLVAVMRILEVSRCGASREAPRQ*KHPSSS Trigger: GGAAGAAGAAGGATGCTTGCACTGACGGGGTGCTTC...ACGTGATGCTCCACACCTGGACACCTCCAGGATCCTCATAACTGCCACAAGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR TCA 90 bp | GACCTTATGTACAGTGATAGAAGAATGGATGCCTTGGATAATCAATGTCTCTGTCCGGAGGCTGCCTCGTaGTGGCAGCTCTCCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: DLMYSDRRMDALDNQCLCPEAAS*WQLSQG Trigger: CCCCTGGGAGAGCTGCCATCACGAGGCAGCCTCCGG...ACAGAGACATTGATTATCCAAGGCATCCATTCTTCTATCACTGTACATAAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR TCA 90 bp | GTCCTTCAGACCAGAAAGAGAATGCCCCACCCTCCATCATTTCCTGTTCTTTGCATCCTTCTTCTTCCCTaGGCAGAGGCCATGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VLQTRKRMPHPPSFPVLCILLLP*AEAMVP Trigger: TGGCACCATGGCCTCTGCTCAGGGAAGAAGAAGGAT...GCAAAGAACAGGAAATGATGGAGGGTGGGGCATTCTCTTTCTGGTCTGAAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR CCA 90 bp | GTCCTTCAGACCAGAAAGAGAATGCCCCACCCTCCATCATTTCCTGTTCTTTGCAACCTCGGAAAAATGTaGCCAGGAGCTCCTCCGATG | + |
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Preference number: 4 (lower is better) Translates to: VLQTRKRMPHPPSFPVLCNLGKM*PGAPPM Trigger: CATCGGAGGAGCTCCTGGCCACATTTTTCCGAGGTT...GCAAAGAACAGGAAATGATGGAGGGTGGGGCATTCTCTTTCTGGTCTGAAGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR TCA 90 bp | CAACCCCTCATCATCTGTAATCTCAATTTACTTTTGATGGCCCTTGAACTCAGAAGCTCTCCCAGGGGGTaGCTGTGGTCATATCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QPLIICNLNLLLMALELRSSPRG*LWSYPS Trigger: GCTGGGATATGACCACAGTCACCCCCTGGGAGAGCT...TCTGAGTTCAAGGGCCATCAAAAGTAAATTGAGATTACAGATGATGAGGGGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR CCA 90 bp | GCTACCAGAAAAATGGCTTTGATCCCAACATGGCACATTAGCTACCAACCCCTCCCCAGGAAACGAGAGTaGTACAGAGTCTCCAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: ATRKMALIPTWHISYQPLPRKRE*YRVSKE Trigger: TTCCTTGGAGACTCTGTACCACTCTCGTTTCCTGGG...GAGGGGTTGGTAGCTAATGTGCCATGTTGGGATCAAAGCCATTTTTCTGGTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| 3UTR CAA 72 bp | CTTGAACACAAGGAACTCAGACCCCAGGGGCTGGAGTaGGAGTTGGCAATGGTTAGCTCAATTTCCATGTTA | + |
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Preference number: 4 (lower is better) Translates to: LEHKELRPQGLE*ELAMVSSISML Trigger: TAACATGGAAATTGAGCTAACCATTGCCAACTCCAACTCCAGCCCCTGGGGTCTGAGTTCCTTGTGTTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR CCA 90 bp | AGCTACCAACCCCTCATCATCTGTAATCTCAATTTACTTTTGATGGCCCTTGAACCTGAGCAGAGGCCATaGTGCCATGCCCCAAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SYQPLIICNLNLLLMALEPEQRP*CHAPKR Trigger: TCTCTTTGGGGCATGGCACCATGGCCTCTGCTCAGG...TTCAAGGGCCATCAAAAGTAAATTGAGATTACAGATGATGAGGGGTTGGTAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR GCA 90 bp | GTCCTTCAGACCAGAAAGAGAATGCCCCACCCTCCATCATTTCCTGTTCTTTGCTTTGAGAAATGGCTGTaGACTTCACCATTGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: VLQTRKRMPHPPSFPVLCFEKWL*TSPLKS Trigger: GGACTTCAATGGTGAAGTGCACAGCCATTTCTCAAA...GCAAAGAACAGGAAATGATGGAGGGTGGGGCATTCTCTTTCTGGTCTGAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR TCA 90 bp | CTTATGTACAGTGATAGAAGAATGGATGCCTTGGATAATCAATGTCTCTGTGGAGTCTGGGTCCAGGTTTaGCCCCTTGTATCCACCATC | + |
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Preference number: 4 (lower is better) Translates to: LMYSDRRMDALDNQCLCGVWVQV*PLVSTI Trigger: GATGGTGGATACAAGGGGTCAAACCTGGACCCAGAC...TCCACAGAGACATTGATTATCCAAGGCATCCATTCTTCTATCACTGTACATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR CCA 90 bp | AGCTACCAACCCCTCATCATCTGTAATCTCAATTTACTTTTGATGGCCCTTGAAAGGTTGTCATATAGCTaGACTCGGCCCAGGAAACGA | + |
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Preference number: 4 (lower is better) Translates to: SYQPLIICNLNLLLMALERLSYS*TRPRKR Trigger: TCGTTTCCTGGGCCGAGTCCAGCTATATGACAACCT...TTCAAGGGCCATCAAAAGTAAATTGAGATTACAGATGATGAGGGGTTGGTAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR CCA 90 bp | ATTAGCTACCAACCCCTCATCATCTGTAATCTCAATTTACTTTTGATGGCCCTTACCTTGCTTAGCACTTaGACACTGACAACCACAACG | + |
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Preference number: 4 (lower is better) Translates to: ISYQPLIICNLNLLLMALTLLST*TLTTTT Trigger: CGTTGTGGTTGTCAGTGTCCAAGTGCTAAGCAAGGT...AAGGGCCATCAAAAGTAAATTGAGATTACAGATGATGAGGGGTTGGTAGCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR CCA 90 bp | CAACCCCTCATCATCTGTAATCTCAATTTACTTTTGATGGCCCTTGAACTCAGATGTCCATTTGAGAAATaGCTGTGCACTTCACCATTG | + |
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Preference number: 4 (lower is better) Translates to: QPLIICNLNLLLMALELRCPFEK*LCTSPL Trigger: CAATGGTGAAGTGCACAGCCATTTCTCAAATGGACA...TCTGAGTTCAAGGGCCATCAAAAGTAAATTGAGATTACAGATGATGAGGGGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CCA 90 bp | AGCTCCTCCGATGGCCACAGAGATCGCCAGATAGCCTCACGCACTTaGAAGCCCGGAGGACACTCGGCCACCAGCAGCTCTGAGTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: SSSDGHRDRQIASRT*KPGGHSATSSSESP Trigger: AGGGGACTCAGAGCTGCTGGTGGCCGAGTGTCCTCCGGGCTTCCAAGTGCGTGAGGCTATCTGGCGATCTCTGTGGCCATCGGAGGAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CCA 90 bp | AGTCTCCAAGGAACCTCGGAAAAATGTGGCCAGGAGCTCCTCCGATaGCCACAGAGATCGCCAGATAGCCTCACGCACTTGGAAGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: SLQGTSEKCGQELLR*PQRSPDSLTHLEAR Trigger: CCGGGCTTCCAAGTGCGTGAGGCTATCTGGCGATCTCTGTGGCCATCGGAGGAGCTCCTGGCCACATTTTTCCGAGGTTCCTTGGAGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR CAA 90 bp | CGACTTGTGGCAGTTATGAGGATCCTGGAGGTGTCCAGGTGTGGAGCATCACGTGATAGCCTCACGCACTaGGAAGCCCGGAGGACACTC | + |
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Preference number: 5 (lower is better) Translates to: RLVAVMRILEVSRCGASRDSLTH*EARRTL Trigger: GAGTGTCCTCCGGGCTTCCAAGTGCGTGAGGCTATC...ACGTGATGCTCCACACCTGGACACCTCCAGGATCCTCATAACTGCCACAAGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS TCA 90 bp | AGAAATTGCCGCTGTCTCCAGGTTTCAGGGGTCCAAGCTCCAGGCTaGGGTTGTCATATAGCTGGACTCGGCCCAGGAAACGAGAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: RNCRCLQVSGVQAPG*GCHIAGLGPGNESG Trigger: ACCACTCTCGTTTCCTGGGCCGAGTCCAGCTATATGACAACCTCAGCCTGGAGCTTGGACCCCTGAAACCTGGAGACAGCGGCAATTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS GCA 90 bp | CTCCTCTGCTGCAGCAGTGAACACTTGAACCTCGGGCTTGGGTACTaGATCGTACACCTTGAGATACAGGGTCTGGGTCCAGGTTTGACC | + |
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Preference number: 5 (lower is better) Translates to: LLCCSSEHLNLGLGY*IVHLEIQGLGPGLT Trigger: GGTCAAACCTGGACCCAGACCCTGTATCTCAAGGTGTACGATGCAGTACCCAAGCCCGAGGTTCAAGTGTTCACTGCTGCAGCAGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS GCA 90 bp | GCAGGACAAGAAGACCTGACAGGTATTGAGGGGTTGGGTCTCCTCTaGTGCAGCAGTGAACACTTGAACCTCGGGCTTGGGTACTGCATC | + |
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Preference number: 5 (lower is better) Translates to: AGQEDLTGIEGLGLL*CSSEHLNLGLGYCI Trigger: GATGCAGTACCCAAGCCCGAGGTTCAAGTGTTCACTGCTGCAGCAGAGGAGACCCAACCCCTCAATACCTGTCAGGTCTTCTTGTCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CCA 90 bp | CCAGGTTTCAGGGGTCCAAGCTCCAGGCTGAGGTTGTCATATAGCTaGACTCGGCCCAGGAAACGAGAGTGGTACAGAGTCTCCAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: PGFRGPSSRLRLSYS*TRPRKREWYRVSKE Trigger: TTCCTTGGAGACTCTGTACCACTCTCGTTTCCTGGGCCGAGTCCAGCTATATGACAACCTCAGCCTGGAGCTTGGACCCCTGAAACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR CAA 90 bp | CGACTTGTGGCAGTTATGAGGATCCTGGAGGTGTCCAGGTGTGGAGCATCACGTGGTCTGGGTCCAGGTTaGACCCCTTGTATCCACCAT | + |
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Preference number: 5 (lower is better) Translates to: RLVAVMRILEVSRCGASRGLGPG*TPCIHH Trigger: ATGGTGGATACAAGGGGTCAAACCTGGACCCAGACC...ACGTGATGCTCCACACCTGGACACCTCCAGGATCCTCATAACTGCCACAAGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR CAA 90 bp | TGGAGCATCACGTGGCTGAGCAGGGCATCTCATCATGGTCCAAGCACCAGTTTAACAGGTATTGAGGGGTaGGGTCTCCTCTGCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: WSITWLSRASHHGPSTSLTGIEG*GLLCCS Trigger: GCTGCAGCAGAGGAGACCCAACCCCTCAATACCTGT...TAAACTGGTGCTTGGACCATGATGAGATGCCCTGCTCAGCCACGTGATGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR CAA 90 bp | ATGGAGGAAGGAGGAAGTTTGGGCCAGGGTGACGTTCCAGGATGGTGGTTTTCTGTAAAGGCCACATCCTaGTCCCCCAGTCCCAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: MEEGGSLGQGDVPGWWFSVKATS*SPSPSE Trigger: CTCACTGGGACTGGGGGACAAGGATGTGGCCTTTAC...AGAAAACCACCATCCTGGAACGTCACCCTGGCCCAAACTTCCTCCTTCCTCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CCA 90 bp | CACTCGGCCACCAGCAGCTCTGAGTCCCCTACCTTGCTTAGCACTTaGACACTGACAACCACAACGGGAAGGAGAGCTTCAAAGAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: HSATSSSESPTLLST*TLTTTTGRRASKRR Trigger: TCTTCTCTTTGAAGCTCTCCTTCCCGTTGTGGTTGTCAGTGTCCAAGTGCTAAGCAAGGTAGGGGACTCAGAGCTGCTGGTGGCCGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CCA 90 bp | AGGCTGAGGTTGTCATATAGCTGGACTCGGCCCAGGAAACGAGAGTaGTACAGAGTCTCCAAGGAACCTCGGAAAAATGTGGCCAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: RLRLSYSWTRPRKRE*YRVSKEPRKNVARS Trigger: GCTCCTGGCCACATTTTTCCGAGGTTCCTTGGAGACTCTGTACCACTCTCGTTTCCTGGGCCGAGTCCAGCTATATGACAACCTCAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR CAA 90 bp | ATGGAGGAAGGAGGAAGTTTGGGCCAGGGTGACGTTCCAGGATGGTGGTTTTCTGTTATGTCACTGATGTaGGGGGCCCAGCAGGACAAG | + |
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Preference number: 5 (lower is better) Translates to: MEEGGSLGQGDVPGWWFSVMSLM*GAQQDK Trigger: CTTGTCCTGCTGGGCCCCCAACATCAGTGACATAAC...AGAAAACCACCATCCTGGAACGTCACCCTGGCCCAAACTTCCTCCTTCCTCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS TCA 90 bp | CCACCAGCAGCTCTGAGTCCCCTACCTTGCTTAGCACTTGGACACTaGCAACCACAACGGGAAGGAGAGCTTCAAAGAGAAGAAGACTCC | + |
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Preference number: 5 (lower is better) Translates to: PPAALSPLPCLALGH*QPQREGELQREEDS Trigger: GGAGTCTTCTTCTCTTTGAAGCTCTCCTTCCCGTTGTGGTTGTCAGTGTCCAAGTGCTAAGCAAGGTAGGGGACTCAGAGCTGCTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS TCA 90 bp | GGTACTGCATCGTACACCTTGAGATACAGGGTCTGGGTCCAGGTTTaGCCCCTTGTATCCACCATCAGCACAGAGAAATTGCCGCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: GTASYTLRYRVWVQV*PLVSTISTEKLPLS Trigger: AGACAGCGGCAATTTCTCTGTGCTGATGGTGGATACAAGGGGTCAAACCTGGACCCAGACCCTGTATCTCAAGGTGTACGATGCAGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR CAA 90 bp | AATAACATCTTGAACACAAGGAACTCAGACCCCAGGGGCTGGAGTTGGAGTTGGAGCTCCAGGCTGAGGTaGTCATATAGCTGGACTCGG | + |
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Preference number: 5 (lower is better) Translates to: NNILNTRNSDPRGWSWSWSSRLR*SYSWTR Trigger: CCGAGTCCAGCTATATGACAACCTCAGCCTGGAGCT...CCAACTCCAACTCCAGCCCCTGGGGTCTGAGTTCCTTGTGTTCAAGATGTTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS TCA 90 bp | CACTTAACACCTGTCCATTTGAGAAATGGCTGTGCACTTCACCATTaGAGTCCACTGTCCCCTCCCGTCGCCAGCTGTAGGTTATGTCAC | + |
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Preference number: 5 (lower is better) Translates to: HLTPVHLRNGCALHH*SPLSPPVASCRLCH Trigger: GTGACATAACCTACAGCTGGCGACGGGAGGGGACAGTGGACTTCAATGGTGAAGTGCACAGCCATTTCTCAAATGGACAGGTGTTAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR CAA 90 bp | GCTACCAGAAAAATGGCTTTGATCCCAACATGGCACATTAGCTACCAACCCCTCATCAGCACAGAGAAATaGCCGCTGTCTCCAGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: ATRKMALIPTWHISYQPLISTEK*PLSPGF Trigger: GAAACCTGGAGACAGCGGCAATTTCTCTGTGCTGAT...GAGGGGTTGGTAGCTAATGTGCCATGTTGGGATCAAAGCCATTTTTCTGGTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS-3UTR CAA 90 bp | TGGATGCCTTGGATAATCAATGTCTCTGTGGATCCTAGAGAAAGTCCTGTGTTCTCCAGGTTTGACCCCTaGTATCCACCATCAGCACAG | + |
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Preference number: 5 (lower is better) Translates to: WMPWIINVSVDPRESPVFSRFDP*YPPSAQ Trigger: CTGTGCTGATGGTGGATACAAGGGGTCAAACCTGGA...GAACACAGGACTTTCTCTAGGATCCACAGAGACATTGATTATCCAAGGCATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CAA 72 bp | CGATGGCCACAGAGATCGCCAGATAGCCTCACGCACTaGGAAGCCCGGAGGACACTCGGCCACCAGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: RWPQRSPDSLTH*EARRTLGHQQL Trigger: GAGCTGCTGGTGGCCGAGTGTCCTCCGGGCTTCCAAGTGCGTGAGGCTATCTGGCGATCTCTGTGGCCATCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CCA 72 bp | GATGGCCACAGAGATCGCCAGATAGCCTCACGCACTTaGAAGCCCGGAGGACACTCGGCCACCAGCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: DGHRDRQIASRT*KPGGHSATSSS Trigger: AGAGCTGCTGGTGGCCGAGTGTCCTCCGGGCTTCCAAGTGCGTGAGGCTATCTGGCGATCTCTGTGGCCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS TCA 72 bp | CTGTCCCCTCCCGTCGCCAGCTGTAGGTTATGTCACTaGTGTTGGGGGCCCAGCAGGACAAGAAGACCTGAC | + |
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Preference number: 6 (lower is better) Translates to: LSPPVASCRLCH*CWGPSRTRRPD Trigger: GTCAGGTCTTCTTGTCCTGCTGGGCCCCCAACATCAGTGACATAACCTACAGCTGGCGACGGGAGGGGACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CAA 90 bp | AAGCCCGGAGGACACTCGGCCACCAGCAGCTCTGAGTCCCCTACCTaGCTTAGCACTTGGACACTGACAACCACAACGGGAAGGAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: KPGGHSATSSSESPT*LSTWTLTTTTGRRA Trigger: AGCTCTCCTTCCCGTTGTGGTTGTCAGTGTCCAAGTGCTAAGCAAGGTAGGGGACTCAGAGCTGCTGGTGGCCGAGTGTCCTCCGGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CAA 90 bp | GTTGGGGGCCCAGCAGGACAAGAAGACCTGACAGGTATTGAGGGGTaGGGTCTCCTCTGCTGCAGCAGTGAACACTTGAACCTCGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: VGGPAGQEDLTGIEG*GLLCCSSEHLNLGL Trigger: AAGCCCGAGGTTCAAGTGTTCACTGCTGCAGCAGAGGAGACCCAACCCCTCAATACCTGTCAGGTCTTCTTGTCCTGCTGGGCCCCCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS TCA 72 bp | CGCTGTCTCCAGGTTTCAGGGGTCCAAGCTCCAGGCTaGGGTTGTCATATAGCTGGACTCGGCCCAGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: RCLQVSGVQAPG*GCHIAGLGPGN Trigger: GTTTCCTGGGCCGAGTCCAGCTATATGACAACCTCAGCCTGGAGCTTGGACCCCTGAAACCTGGAGACAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CCA 72 bp | GGAACCTCGGAAAAATGTGGCCAGGAGCTCCTCCGATaGCCACAGAGATCGCCAGATAGCCTCACGCACTTG | + |
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Preference number: 6 (lower is better) Translates to: GTSEKCGQELLR*PQRSPDSLTHL Trigger: CAAGTGCGTGAGGCTATCTGGCGATCTCTGTGGCCATCGGAGGAGCTCCTGGCCACATTTTTCCGAGGTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CCA 72 bp | GTGCAAGCATCCTTCTTCTTCCCTGAGCAGAGGCCATaGTGCCATGCCCCAAAGAGACCAGCCAGGATCAGG | + |
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Preference number: 6 (lower is better) Translates to: VQASFFFPEQRP*CHAPKRPARIR Trigger: CCTGATCCTGGCTGGTCTCTTTGGGGCATGGCACCATGGCCTCTGCTCAGGGAAGAAGAAGGATGCTTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CAA 72 bp | GGACACTCGGCCACCAGCAGCTCTGAGTCCCCTACCTaGCTTAGCACTTGGACACTGACAACCACAACGGGA | + |
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Preference number: 6 (lower is better) Translates to: GHSATSSSESPT*LSTWTLTTTTG Trigger: TCCCGTTGTGGTTGTCAGTGTCCAAGTGCTAAGCAAGGTAGGGGACTCAGAGCTGCTGGTGGCCGAGTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CAA 90 bp | TTGCCGCTGTCTCCAGGTTTCAGGGGTCCAAGCTCCAGGCTGAGGTaGTCATATAGCTGGACTCGGCCCAGGAAACGAGAGTGGTACAGA | + |
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Preference number: 6 (lower is better) Translates to: LPLSPGFRGPSSRLR*SYSWTRPRKREWYR Trigger: TCTGTACCACTCTCGTTTCCTGGGCCGAGTCCAGCTATATGACAACCTCAGCCTGGAGCTTGGACCCCTGAAACCTGGAGACAGCGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS TCA 72 bp | AGGGGTTGGGTCTCCTCTGCTGCAGCAGTGAACACTTaGACCTCGGGCTTGGGTACTGCATCGTACACCTTG | + |
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Preference number: 6 (lower is better) Translates to: RGWVSSAAAVNT*TSGLGTASYTL Trigger: CAAGGTGTACGATGCAGTACCCAAGCCCGAGGTTCAAGTGTTCACTGCTGCAGCAGAGGAGACCCAACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS TCA 72 bp | TCACTGATGTTGGGGGCCCAGCAGGACAAGAAGACCTaGCAGGTATTGAGGGGTTGGGTCTCCTCTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SLMLGAQQDKKT*QVLRGWVSSAA Trigger: TGCAGCAGAGGAGACCCAACCCCTCAATACCTGTCAGGTCTTCTTGTCCTGCTGGGCCCCCAACATCAGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS GCA 72 bp | GACCTGACAGGTATTGAGGGGTTGGGTCTCCTCTGCTaGAGCAGTGAACACTTGAACCTCGGGCTTGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: DLTGIEGLGLLC*SSEHLNLGLGY Trigger: GTACCCAAGCCCGAGGTTCAAGTGTTCACTGCTGCAGCAGAGGAGACCCAACCCCTCAATACCTGTCAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS GCA 72 bp | CAAGCATCCTTCTTCTTCCCTGAGCAGAGGCCATGGTaGCATGCCCCAAAGAGACCAGCCAGGATCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: QASFFFPEQRPW*HAPKRPARIRN Trigger: GTTCCTGATCCTGGCTGGTCTCTTTGGGGCATGGCACCATGGCCTCTGCTCAGGGAAGAAGAAGGATGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CCA 72 bp | AGTGGTACAGAGTCTCCAAGGAACCTCGGAAAAATGTaGCCAGGAGCTCCTCCGATGGCCACAGAGATCGCC | + |
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Preference number: 6 (lower is better) Translates to: SGTESPRNLGKM*PGAPPMATEIA Trigger: GGCGATCTCTGTGGCCATCGGAGGAGCTCCTGGCCACATTTTTCCGAGGTTCCTTGGAGACTCTGTACCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CCA 72 bp | AGGGGTCCAAGCTCCAGGCTGAGGTTGTCATATAGCTaGACTCGGCCCAGGAAACGAGAGTGGTACAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: RGPSSRLRLSYS*TRPRKREWYRV Trigger: GACTCTGTACCACTCTCGTTTCCTGGGCCGAGTCCAGCTATATGACAACCTCAGCCTGGAGCTTGGACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CAA 72 bp | TCTCCAGGTTTCAGGGGTCCAAGCTCCAGGCTGAGGTaGTCATATAGCTGGACTCGGCCCAGGAAACGAGAG | + |
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Preference number: 6 (lower is better) Translates to: SPGFRGPSSRLR*SYSWTRPRKRE Trigger: CTCTCGTTTCCTGGGCCGAGTCCAGCTATATGACAACCTCAGCCTGGAGCTTGGACCCCTGAAACCTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CAA 72 bp | GAGGGGTTGGGTCTCCTCTGCTGCAGCAGTGAACACTaGAACCTCGGGCTTGGGTACTGCATCGTACACCTT | + |
|
Preference number: 6 (lower is better) Translates to: EGLGLLCCSSEH*NLGLGYCIVHL Trigger: AAGGTGTACGATGCAGTACCCAAGCCCGAGGTTCAAGTGTTCACTGCTGCAGCAGAGGAGACCCAACCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS TCA 72 bp | CCTGTCCATTTGAGAAATGGCTGTGCACTTCACCATTaGAGTCCACTGTCCCCTCCCGTCGCCAGCTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PVHLRNGCALHH*SPLSPPVASCR Trigger: CCTACAGCTGGCGACGGGAGGGGACAGTGGACTTCAATGGTGAAGTGCACAGCCATTTCTCAAATGGACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS GCA 72 bp | TGCAGCAGTGAACACTTGAACCTCGGGCTTGGGTACTaGATCGTACACCTTGAGATACAGGGTCTGGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CSSEHLNLGLGY*IVHLEIQGLGP Trigger: TGGACCCAGACCCTGTATCTCAAGGTGTACGATGCAGTACCCAAGCCCGAGGTTCAAGTGTTCACTGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CCA 72 bp | ACCAGCAGCTCTGAGTCCCCTACCTTGCTTAGCACTTaGACACTGACAACCACAACGGGAAGGAGAGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TSSSESPTLLST*TLTTTTGRRAS Trigger: TGAAGCTCTCCTTCCCGTTGTGGTTGTCAGTGTCCAAGTGCTAAGCAAGGTAGGGGACTCAGAGCTGCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS GCA 72 bp | TTTGACCCCTTGTATCCACCATCAGCACAGAGAAATTaGCGCTGTCTCCAGGTTTCAGGGGTCCAAGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FDPLYPPSAQRN*RCLQVSGVQAP Trigger: TGGAGCTTGGACCCCTGAAACCTGGAGACAGCGGCAATTTCTCTGTGCTGATGGTGGATACAAGGGGTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS TCA 72 bp | GCTCTGAGTCCCCTACCTTGCTTAGCACTTGGACACTaGCAACCACAACGGGAAGGAGAGCTTCAAAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ALSPLPCLALGH*QPQREGELQRE Trigger: TTCTCTTTGAAGCTCTCCTTCCCGTTGTGGTTGTCAGTGTCCAAGTGCTAAGCAAGGTAGGGGACTCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS TCA 72 bp | TCGTACACCTTGAGATACAGGGTCTGGGTCCAGGTTTaGCCCCTTGTATCCACCATCAGCACAGAGAAATTG | + |
|
Preference number: 6 (lower is better) Translates to: SYTLRYRVWVQV*PLVSTISTEKL Trigger: CAATTTCTCTGTGCTGATGGTGGATACAAGGGGTCAAACCTGGACCCAGACCCTGTATCTCAAGGTGTACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS GCA 72 bp | GAGACACTTAACACCTGTCCATTTGAGAAATGGCTGTaGACTTCACCATTGAAGTCCACTGTCCCCTCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: ETLNTCPFEKWL*TSPLKSTVPSR Trigger: ACGGGAGGGGACAGTGGACTTCAATGGTGAAGTGCACAGCCATTTCTCAAATGGACAGGTGTTAAGTGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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| CDS CCA 72 bp | TTGTCATATAGCTGGACTCGGCCCAGGAAACGAGAGTaGTACAGAGTCTCCAAGGAACCTCGGAAAAATGTG | + |
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Preference number: 6 (lower is better) Translates to: LSYSWTRPRKRE*YRVSKEPRKNV Trigger: CACATTTTTCCGAGGTTCCTTGGAGACTCTGTACCACTCTCGTTTCCTGGGCCGAGTCCAGCTATATGACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065679.8 |
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