Pregenerated sensors for SLAMF7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038179Ensembl transcript IDs: ENSMUST00000111276.9, ENSMUST00000192024.6, ENSMUST00000192195.6, ENSMUST00000194531.6, ENSMUST00000194791.2
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGATTCTGCCTGAGGTGGAGCAGAAGGCTTGCCCAGAGCCAGGAGTaGCTGTCACTTTCTAGGCCTGCCTCCTGGAGACTCACCGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: GFCLRWSRRLAQSQE*LSLSRPASWRLTVC Trigger: GCAGACGGTGAGTCTCCAGGAGGCAGGCCTAGAAAGTGACAGTCACTCCTGGCTCTGGGCAAGCCTTCTGCTCCACCTCAGGCAGAATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR TCA 90 bp | GGCAGAAGAGAGGGAGGTGAGGTTTTGGTTCCCAGGCTTGGGATCTaGGGCAGGAGGTTCATGAGGAGAGACGGTGGAGAGAGAAGACAC | + |
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Preference number: 1 (lower is better) Translates to: GRREGGEVLVPRLGI*GRRFMRRDGGERRH Trigger: GTGTCTTCTCTCTCCACCGTCTCTCCTCATGAACCTCCTGCCTCAGATCCCAAGCCTGGGAACCAAAACCTCACCTCCCTCTCTTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR GCA 90 bp | GCGGCTTTAGGGGCTTGGCCTGTGTTGGAGGGAGTTTGCAATGTCTaGTTCTTCATAACATGGTGGACAGGATTCTGCCTGAGGTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: AALGAWPVLEGVCNV*FFITWWTGFCLRWS Trigger: GCTCCACCTCAGGCAGAATCCTGTCCACCATGTTATGAAGAAGCAGACATTGCAAACTCCCTCCAACACAGGCCAAGCCCCTAAAGCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR TCA 90 bp | TTCAGTGGCTCCCCAGAGTTTACATTCTGCACGTGTGGACATTGCTaGGTTCTGCTGTCACTCCAGGATGGAGCCATACCTGCTTGGGTC | + |
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Preference number: 1 (lower is better) Translates to: FSGSPEFTFCTCGHC*VLLSLQDGAIPAWV Trigger: GACCCAAGCAGGTATGGCTCCATCCTGGAGTGACAGCAGAACTCAGCAATGTCCACACGTGCAGAATGTAAACTCTGGGGAGCCACTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR CCA 90 bp | TGGCCTGTGTTGGAGGGAGTTTGCAATGTCTGCTTCTTCATAACATaGTGGACAGGATTCTGCCTGAGGTGGAGCAGAAGGCTTGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: WPVLEGVCNVCFFIT*WTGFCLRWSRRLAQ Trigger: CTGGGCAAGCCTTCTGCTCCACCTCAGGCAGAATCCTGTCCACCATGTTATGAAGAAGCAGACATTGCAAACTCCCTCCAACACAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR CCA 90 bp | AAGGAAAACAGAGAAGAAGGCATTGTTCCTGCGGAGCACAAGCTGTaGACATCTCACCACATCTGCGGCTTAAGGGGGAGGCTACAAAGC | + |
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Preference number: 1 (lower is better) Translates to: KENREEGIVPAEHKL*TSHHICGLRGRLQS Trigger: GCTTTGTAGCCTCCCCCTTAAGCCGCAGATGTGGTGAGATGTCCACAGCTTGTGCTCCGCAGGAACAATGCCTTCTTCTCTGTTTTCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
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| 3UTR CCA 90 bp | TCCCAGGCTTGGGATCTGAGGCAGGAGGTTCATGAGGAGAGACGGTaGAGAGAGAAGACACCATTGTGTTGGGGAATCATGAAAATATGG | + |
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Preference number: 1 (lower is better) Translates to: SQAWDLRQEVHEERR*REKTPLCWGIMKIW Trigger: CCATATTTTCATGATTCCCCAACACAATGGTGTCTTCTCTCTCCACCGTCTCTCCTCATGAACCTCCTGCCTCAGATCCCAAGCCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR TCA 90 bp | AGGAGAGACGGTGGAGAGAGAAGACACCATTGTGTTGGGGAATCATaGAAATATGGCCATAAGGGCTGGGCCAATTGGAGTAAGAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: RRDGGERRHHCVGES*KYGHKGWANWSKSS Trigger: GCTGCTCTTACTCCAATTGGCCCAGCCCTTATGGCCATATTTTCATGATTCCCCAACACAATGGTGTCTTCTCTCTCCACCGTCTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR TCA 90 bp | ATGTCTGAATGGGCTGTATCCCAGTCCCCAAGAGTCATTGTACCCTaGAAGCCCTTGAGCCTGAACTTCTCTGTCTGGATGCAAACATGT | + |
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Preference number: 1 (lower is better) Translates to: MSEWAVSQSPRVIVP*KPLSLNFSVWMQTC Trigger: ACATGTTTGCATCCAGACAGAGAAGTTCAGGCTCAAGGGCTTTCAGGGTACAATGACTCTTGGGGACTGGGATACAGCCCATTCAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
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| 3UTR CCA 90 bp | AACAAAGTCACGAAAAACTATCCTGAAGACATGCTCAAAGCTCAATaGCCATACGTCTGGCATCACAGGTCTGGCATCACAGGCAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: NKVTKNYPEDMLKAQ*PYVWHHRSGITGRE Trigger: CTCCCTGCCTGTGATGCCAGACCTGTGATGCCAGACGTATGGCCATTGAGCTTTGAGCATGTCTTCAGGATAGTTTTTCGTGACTTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
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| 3UTR CCA 90 bp | CCTCAGAGTCCAAAGAGGCTGAGAATAGCTTATTCTGGAAGGAAGTaGTATCAGCTACCACACTGCCAAAATCCTGGCAGGAGCAACTTA | + |
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Preference number: 1 (lower is better) Translates to: PQSPKRLRIAYSGRK*YQLPHCQNPGRSNL Trigger: TAAGTTGCTCCTGCCAGGATTTTGGCAGTGTGGTAGCTGATACCACTTCCTTCCAGAATAAGCTATTCTCAGCCTCTTTGGACTCTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR CCA 90 bp | ACTCAGCAGAGAGGTATAAGCCTTGAAGCTCCGTATCTGGCATCTTaGGTACATGGTATCATCATGTATGTTCCAATGGGTTTGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: TQQRGISLEAPYLAS*VHGIIMYVPMGLRR Trigger: CCTCCTCAAACCCATTGGAACATACATGATGATACCATGTACCCAAGATGCCAGATACGGAGCTTCAAGGCTTATACCTCTCTGCTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR TCA 90 bp | TTGGAGCAATTTCAGGCATCTCCCAGTCATTTTCTCTGGGCTAACTaGCAGATTCAGTCACACTGGCAGAAAGGAATACAGATTCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: LEQFQASPSHFLWAN*QIQSHWQKGIQILG Trigger: ACCCAGAATCTGTATTCCTTTCTGCCAGTGTGACTGAATCTGTCAGTTAGCCCAGAGAAAATGACTGGGAGATGCCTGAAATTGCTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR TCA 90 bp | GGGCTCATCCCTTTAACCATTACAGTCGAAGCTGAAAAACCCATTTaGAAACCCTTCATGCTGTCTATCAACCTGCATGCTTTTCCCATC | + |
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Preference number: 1 (lower is better) Translates to: GLIPLTITVEAEKPI*KPFMLSINLHAFPI Trigger: GATGGGAAAAGCATGCAGGTTGATAGACAGCATGAAGGGTTTTCAAATGGGTTTTTCAGCTTCGACTGTAATGGTTAAAGGGATGAGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTGGGCAGCTCCAGCATCCTTTATGTTTTAGGCAGCTCCAGCATCCTGGAGGAGCCATACCTGCTTaGGTCAGGGCTCCAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: CSGQLQHPLCFRQLQHPGGAIPA*VRAPAA Trigger: GGCTGCTGGAGCCCTGACCCAAGCAGGTATGGCTCC...TCCAGGATGCTGGAGCTGCCTAAAACATAAAGGATGCTGGAGCTGCCCAGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR TCA 90 bp | GTGTGGACATTGCTGAGTTCTGCTGTCACTCCAGGATGGAGCCATACCTGCTTGGAGGCAGGAGGTTCATaGGGAGAGACGGTGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: VWTLLSSAVTPGWSHTCLEAGGS*GETVER Trigger: TCTCTCCACCGTCTCTCCTCATGAACCTCCTGCCTC...CAAGCAGGTATGGCTCCATCCTGGAGTGACAGCAGAACTCAGCAATGTCCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR CAA 90 bp | CAGCAAGCAAATCTCCCTCCTCAGGTTACCAGCGGCTCAGGAGTGTaGGGAGTTGCCACAAAGGGAGTCGCCATCCATGACATAGCACAA | + |
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Preference number: 2 (lower is better) Translates to: QQANLPPQVTSGSGV*GVATKGVAIHDIAQ Trigger: TTGTGCTATGTCATGGATGGCGACTCCCTTTGTGGCAACTCCCAACACTCCTGAGCCGCTGGTAACCTGAGGAGGGAGATTTGCTTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
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| 3UTR CAA 90 bp | CAGAGGCATGGCGGCTTTAGGGGCTTGGCCTGTGTTGGAGGGAGTTaGCAATGTCTGCTTCTTCATAACATGGTGGACAGGATTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: QRHGGFRGLACVGGS*QCLLLHNMVDRILP Trigger: AGGCAGAATCCTGTCCACCATGTTATGAAGAAGCAGACATTGCAAACTCCCTCCAACACAGGCCAAGCCCCTAAAGCCGCCATGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR CAA 90 bp | AAGCTTCAGTGGCTCCCCAGAGTTTACATTCTGCACGTGTGGACATaGCTGAGTTCTGCTGTCACTCCAGGATGGAGCCATACCTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: KLQWLPRVYILHVWT*LSSAVTPGWSHTCL Trigger: CAAGCAGGTATGGCTCCATCCTGGAGTGACAGCAGAACTCAGCAATGTCCACACGTGCAGAATGTAAACTCTGGGGAGCCACTGAAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR CCA 90 bp | GGAATACAGATTCTGGGTTTGAGGAGAGTTCTCAGCAATTGGACGATGAACCTCCTGGTCCCCAAGGTCTaGTTGCCCTCTGGGACTAGA | + |
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Preference number: 2 (lower is better) Translates to: GIQILGLRRVLSNWTMNLLVPKV*LPSGTR Trigger: TCTAGTCCCAGAGGGCAACCAGACCTTGGGGACCAG...GAGGTTCATCGTCCAATTGCTGAGAACTCTCCTCAAACCCAGAATCTGTATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR CCA 90 bp | ATTGCAACAATCCATGAAAGTGTAACACAGCACCTGGCTCATAGCTGCTGGTTCGGATTCTGCCTGAGGTaGAGCAGAAGGCTTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: IATIHESVTQHLAHSCWFGFCLR*SRRLAQ Trigger: CTGGGCAAGCCTTCTGCTCCACCTCAGGCAGAATCC...GAACCAGCAGCTATGAGCCAGGTGCTGTGTTACACTTTCATGGATTGTTGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR TCA 90 bp | TTTGGGCAGCCTCAAACAAAGTCACGAAAAACTATCCTGAAGACATGCTCAAAGCGAGAACTCTCCAGATaGAGGCAGACTCGAGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: FGQPQTKSRKTILKTCSKRELSR*RQTRGA Trigger: GGCTCCTCGAGTCTGCCTTCATCTGGAGAGTTCTCG...CTTTGAGCATGTCTTCAGGATAGTTTTTCGTGACTTTGTTTGAGGCTGCCCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
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| 3UTR-3UTR TCA 90 bp | GGAATACAGATTCTGGGTTTGAGGAGAGTTCTCAGCAATTGGACGATGAACCTCGGAGGCCTGTTTCCATaGCCTTCCAACCAAAACCAC | + |
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Preference number: 2 (lower is better) Translates to: GIQILGLRRVLSNWTMNLGGLFP*PSNQNH Trigger: GTGGTTTTGGTTGGAAGGTCATGGAAACAGGCCTCC...GAGGTTCATCGTCCAATTGCTGAGAACTCTCCTCAAACCCAGAATCTGTATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR CCA 90 bp | GCCTCATTCATCATTACCGGAGACAGGATGGGCATAGAGAGATTCTTAGTCAGACTGGATGCAAACATGTaGGTCTGGCGGGGAGACATT | + |
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Preference number: 2 (lower is better) Translates to: ASFIITGDRMGIERFLVRLDANM*VWRGDI Trigger: AATGTCTCCCCGCCAGACCCACATGTTTGCATCCAG...TCTGACTAAGAATCTCTCTATGCCCATCCTGTCTCCGGTAATGATGAATGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
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| 3UTR CAA 90 bp | CTGGCATCTTGGGTACATGGTATCATCATGTATGTTCCAATGGGTTaGAGGAGGCCTGTTTCCATGACCTTCCAACCAAAACCACACGTG | + |
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Preference number: 2 (lower is better) Translates to: LASWVHGIIMYVPMG*RRPVSMTFQPKPHV Trigger: CACGTGTGGTTTTGGTTGGAAGGTCATGGAAACAGGCCTCCTCAAACCCATTGGAACATACATGATGATACCATGTACCCAAGATGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR TCA 90 bp | GAGGGAGTTTGCAATGTCTGCTTCTTCATAACATGGTGGACAGGATTCTGCCTGTGTGTTGGGGAATCATaGAAATATGGCCATAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: EGVCNVCFFITWWTGFCLCVGES*KYGHKG Trigger: GCCCTTATGGCCATATTTTCATGATTCCCCAACACA...CAGGCAGAATCCTGTCCACCATGTTATGAAGAAGCAGACATTGCAAACTCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCCCTGGAACCTTAGTGCAAGCTTCAGTGGCTCCCCAGAGTTTACATTCTCATTACAGTCGAAGCTaGAAAACCCATTTGAAAACC | + |
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Preference number: 2 (lower is better) Translates to: SSPGTLVQASVAPQSLHSHYSRS*KTHLKT Trigger: GGTTTTCAAATGGGTTTTTCAGCTTCGACTGTAATG...AGAATGTAAACTCTGGGGAGCCACTGAAGCTTGCACTAAGGTTCCAGGGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR TCA 90 bp | CAGATTCAGTCACACTGGCAGAAAGGAATACAGATTCTGGGTTTGAGGAGAGTTCTTAGTCAGAATGTCTaGATGGGCTGTATCCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: QIQSHWQKGIQILGLRRVLSQNV*MGCIPV Trigger: GACTGGGATACAGCCCATTCAGACATTCTGACTAAG...AACTCTCCTCAAACCCAGAATCTGTATTCCTTTCTGCCAGTGTGACTGAATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR GCA 90 bp | ATAAATGTGAATAAAAACAGCGAACATGGCTGTGCCACAGCCAAATGCTGTGCTACTTCTCTGTCTGGATaGAAACATGTGGGTCTGGCG | + |
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Preference number: 2 (lower is better) Translates to: INVNKNSEHGCATAKCCATSLSG*KHVGLA Trigger: CGCCAGACCCACATGTTTGCATCCAGACAGAGAAGT...AGCACAGCATTTGGCTGTGGCACAGCCATGTTCGCTGTTTTTATTCACATTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
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| 3UTR-3UTR CCA 90 bp | GGAATACAGATTCTGGGTTTGAGGAGAGTTCTCAGCAATTGGACGATGAACCTCCTGAACTTCTCTGTCTaGATGCAAACATGTGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: GIQILGLRRVLSNWTMNLLNFSV*MQTCGS Trigger: AGACCCACATGTTTGCATCCAGACAGAGAAGTTCAG...GAGGTTCATCGTCCAATTGCTGAGAACTCTCCTCAAACCCAGAATCTGTATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR CCA 90 bp | ATTGCAACAATCCATGAAAGTGTAACACAGCACCTGGCTCATAGCTGCTGGTTCTACATTCTGCACGTGTaGACATTGCTGAGTTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: IATIHESVTQHLAHSCWFYILHV*TLLSSA Trigger: AGCAGAACTCAGCAATGTCCACACGTGCAGAATGTA...GAACCAGCAGCTATGAGCCAGGTGCTGTGTTACACTTTCATGGATTGTTGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR CCA 90 bp | GGTACATGGTATCATCATGTATGTTCCAATGGGTTTGAGGAGGCCTGTTTCCATGCAGCTCCAGCATCCTaGAGTCTAAACTGCAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: GTWYHHVCSNGFEEACFHAAPAS*SLNCKL Trigger: TAACTTGCAGTTTAGACTCCAGGATGCTGGAGCTGC...ATGGAAACAGGCCTCCTCAAACCCATTGGAACATACATGATGATACCATGTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGAGAATAGCTTATTCTGGAAGGAAGTGGTATCAGCTACCACACTGCCAAAGATGCTTTATGTTCTaGGCAGCTCCAGCATCCTTT | + |
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Preference number: 2 (lower is better) Translates to: RLRIAYSGRKWYQLPHCQRCFMF*AAPASF Trigger: AAAGGATGCTGGAGCTGCCCAGAACATAAAGCATCT...TTGGCAGTGTGGTAGCTGATACCACTTCCTTCCAGAATAAGCTATTCTCAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR CAA 90 bp | GCAGAAAGGAATACAGATTCTGGGTTTGAGGAGAGTTCTCAGCAATaGGACGATGAACCTCAGAGTCCAAAGAGGCTGAGAATAGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: AERNTDSGFEESSQQ*DDEPQSPKRLRIAY Trigger: ATAAGCTATTCTCAGCCTCTTTGGACTCTGAGGTTCATCGTCCAATTGCTGAGAACTCTCCTCAAACCCAGAATCTGTATTCCTTTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR GCA 90 bp | ACCTTGAATCTTTTCGACTCAATCCATAACACTCCCGTCTTGGCTCACAGGTCTTGTGCCACAGCCAAATaGTGTGCTTTGTCAAAAATT | + |
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Preference number: 2 (lower is better) Translates to: TLNLFDSIHNTPVLAHRSCATAK*CALSKI Trigger: AATTTTTGACAAAGCACAGCATTTGGCTGTGGCACA...AGACCTGTGAGCCAAGACGGGAGTGTTATGGATTGAGTCGAAAAGATTCAAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR CCA 90 bp | ATTGCAACAATCCATGAAAGTGTAACACAGCACCTGGCTCATAGCTGCTGGTTCAAGACACCATTGTGTTaGGGAATCATGAAAATATGG | + |
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Preference number: 2 (lower is better) Translates to: IATIHESVTQHLAHSCWFKTPLC*GIMKIW Trigger: CCATATTTTCATGATTCCCCAACACAATGGTGTCTT...GAACCAGCAGCTATGAGCCAGGTGCTGTGTTACACTTTCATGGATTGTTGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR GCA 90 bp | CAGATTCAGTCACACTGGCAGAAAGGAATACAGATTCTGGGTTTGAGGAGAGTTCACAGCCAAATGCTGTaGTTTGTCAAAAATTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: QIQSHWQKGIQILGLRRVHSQML*FVKNFF Trigger: GAAGAAATTTTTGACAAAGCACAGCATTTGGCTGTG...AACTCTCCTCAAACCCAGAATCTGTATTCCTTTCTGCCAGTGTGACTGAATCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR-3UTR GCA 90 bp | GGTATCATCATGTATGTTCCAATGGGTTTGAGGAGGCCTGTTTCCATGACCTTCAATTTTCTTAGTAGATaGTTTATGTTCTGGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GIIMYVPMGLRRPVSMTFNFLSR*FMFWAA Trigger: AGCTGCCCAGAACATAAAGCATCTACTAAGAAAATT...GAAGGTCATGGAAACAGGCCTCCTCAAACCCATTGGAACATACATGATGATACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR CAA 90 bp | ATCAACCTGCATGCTTTTCCCATCTTCCTGTTCCTTTTCTTTGTTTaGAGTTCTGCTGAGGTTTGGTCTGTTGCTATGTATTGTAATACT | + |
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Preference number: 2 (lower is better) Translates to: INLHAFPIFLFLFFV*SSAEVWSVAMYCNT Trigger: AGTATTACAATACATAGCAACAGACCAAACCTCAGCAGAACTCAAAACAAAGAAAAGGAACAGGAAGATGGGAAAAGCATGCAGGTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR TCA 72 bp | TCTGGCATCACAGGCAGGGAGCGAGAACTCTCCAGATaGAGGCAGACTCGAGGAGCCAGCGGGGGTCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: SGITGRERELSR*RQTRGASGGLF Trigger: AAACAGACCCCCGCTGGCTCCTCGAGTCTGCCTTCATCTGGAGAGTTCTCGCTCCCTGCCTGTGATGCCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
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| 3UTR CCA 72 bp | ATCTCCCTCCTCAGGTTACCAGCGGCTCAGGAGTGTTaGGAGTTGCCACAAAGGGAGTCGCCATCCATGACA | + |
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Preference number: 3 (lower is better) Translates to: ISLLRLPAAQEC*ELPQRESPSMT Trigger: TGTCATGGATGGCGACTCCCTTTGTGGCAACTCCCAACACTCCTGAGCCGCTGGTAACCTGAGGAGGGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
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| 3UTR CCA 72 bp | GCCTATAGCAGGGCAGAAGAGAGGGAGGTGAGGTTTTaGTTCCCAGGCTTGGGATCTGAGGCAGGAGGTTCA | + |
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Preference number: 3 (lower is better) Translates to: AYSRAEEREVRF*FPGLGSEAGGS Trigger: TGAACCTCCTGCCTCAGATCCCAAGCCTGGGAACCAAAACCTCACCTCCCTCTCTTCTGCCCTGCTATAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR GCA 72 bp | CCTGCGGAGCACAAGCTGTGGACATCTCACCACATCTaGGGCTTAAGGGGGAGGCTACAAAGCAGATGTTCT | + |
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Preference number: 3 (lower is better) Translates to: PAEHKLWTSHHI*GLRGRLQSRCS Trigger: AGAACATCTGCTTTGTAGCCTCCCCCTTAAGCCGCAGATGTGGTGAGATGTCCACAGCTTGTGCTCCGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
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| 3UTR CCA 72 bp | CCTGAAGACATGCTCAAAGCTCAATGGCCATACGTCTaGCATCACAGGTCTGGCATCACAGGCAGGGAGCGA | + |
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Preference number: 3 (lower is better) Translates to: PEDMLKAQWPYV*HHRSGITGRER Trigger: TCGCTCCCTGCCTGTGATGCCAGACCTGTGATGCCAGACGTATGGCCATTGAGCTTTGAGCATGTCTTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
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| 3UTR CCA 72 bp | AGAGAAGAAGGCATTGTTCCTGCGGAGCACAAGCTGTaGACATCTCACCACATCTGCGGCTTAAGGGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: REEGIVPAEHKL*TSHHICGLRGR Trigger: CCTCCCCCTTAAGCCGCAGATGTGGTGAGATGTCCACAGCTTGTGCTCCGCAGGAACAATGCCTTCTTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
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| 3UTR GCA 72 bp | GCAGGTCCATTCAGAAAGCCCAACCTCGATACACGTTaGCTGGTTTTCCTCCCCTGGAACCTTAGTGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: AGPFRKPNLDTR*LVFLPWNLSAS Trigger: GCTTGCACTAAGGTTCCAGGGGAGGAAAACCAGGCAACGTGTATCGAGGTTGGGCTTTCTGAATGGACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| 3UTR TCA 72 bp | TGGGCTGTATCCCAGTCCCCAAGAGTCATTGTACCCTaGAAGCCCTTGAGCCTGAACTTCTCTGTCTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: WAVSQSPRVIVP*KPLSLNFSVWM Trigger: CATCCAGACAGAGAAGTTCAGGCTCAAGGGCTTTCAGGGTACAATGACTCTTGGGGACTGGGATACAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| 3UTR GCA 72 bp | GGGGCTTGGCCTGTGTTGGAGGGAGTTTGCAATGTCTaGTTCTTCATAACATGGTGGACAGGATTCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GAWPVLEGVCNV*FFITWWTGFCL Trigger: CAGGCAGAATCCTGTCCACCATGTTATGAAGAAGCAGACATTGCAAACTCCCTCCAACACAGGCCAAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR CCA 72 bp | TGGGATCTGAGGCAGGAGGTTCATGAGGAGAGACGGTaGAGAGAGAAGACACCATTGTGTTGGGGAATCATG | + |
|
Preference number: 3 (lower is better) Translates to: WDLRQEVHEERR*REKTPLCWGIM Trigger: CATGATTCCCCAACACAATGGTGTCTTCTCTCTCCACCGTCTCTCCTCATGAACCTCCTGCCTCAGATCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR CCA 72 bp | CTTCAGTGGCTCCCCAGAGTTTACATTCTGCACGTGTaGACATTGCTGAGTTCTGCTGTCACTCCAGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: LQWLPRVYILHV*TLLSSAVTPGW Trigger: CCATCCTGGAGTGACAGCAGAACTCAGCAATGTCCACACGTGCAGAATGTAAACTCTGGGGAGCCACTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR TCA 72 bp | TCCCCAGAGTTTACATTCTGCACGTGTGGACATTGCTaGGTTCTGCTGTCACTCCAGGATGGAGCCATACCT | + |
|
Preference number: 3 (lower is better) Translates to: SPEFTFCTCGHC*VLLSLQDGAIP Trigger: AGGTATGGCTCCATCCTGGAGTGACAGCAGAACTCAGCAATGTCCACACGTGCAGAATGTAAACTCTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR GCA 72 bp | AGTTTACATTCTGCACGTGTGGACATTGCTGAGTTCTaGTGTCACTCCAGGATGGAGCCATACCTGCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLHSARVDIAEF*CHSRMEPYLLG Trigger: CCCAAGCAGGTATGGCTCCATCCTGGAGTGACAGCAGAACTCAGCAATGTCCACACGTGCAGAATGTAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR GCA 72 bp | TCACTTTCTAGGCCTGCCTCCTGGAGACTCACCGTCTaGAGACAGACTCTATCTTCTATAGGGTCTACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SLSRPASWRLTV*RQTLSSIGSTA Trigger: TGCTGTAGACCCTATAGAAGATAGAGTCTGTCTGCAGACGGTGAGTCTCCAGGAGGCAGGCCTAGAAAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR CCA 72 bp | GTCCATTCAGAAAGCCCAACCTCGATACACGTTGCCTaGTTTTCCTCCCCTGGAACCTTAGTGCAAGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VHSESPTSIHVA*FSSPGTLVQAS Trigger: TGAAGCTTGCACTAAGGTTCCAGGGGAGGAAAACCAGGCAACGTGTATCGAGGTTGGGCTTTCTGAATGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR TCA 72 bp | AGAACCGTGAGAACCCAGAGAAACACTTCCACAGTCTaGTGTGCGATGTGGGACACTCTGTGTTCAGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: RTVRTQRNTSTV*CAMWDTLCSGI Trigger: AATGCCTGAACACAGAGTGTCCCACATCGCACATCAGACTGTGGAAGTGTTTCTCTGGGTTCTCACGGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR CCA 72 bp | GAGGGAGTTTGCAATGTCTGCTTCTTCATAACATGGTaGACAGGATTCTGCCTGAGGTGGAGCAGAAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: EGVCNVCFFITW*TGFCLRWSRRL Trigger: AAGCCTTCTGCTCCACCTCAGGCAGAATCCTGTCCACCATGTTATGAAGAAGCAGACATTGCAAACTCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR TCA 72 bp | GGTGGAGAGAGAAGACACCATTGTGTTGGGGAATCATaGAAATATGGCCATAAGGGCTGGGCCAATTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: GGERRHHCVGES*KYGHKGWANWS Trigger: ACTCCAATTGGCCCAGCCCTTATGGCCATATTTTCATGATTCCCCAACACAATGGTGTCTTCTCTCTCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR-3UTR CAA 90 bp | GCACGTGTGGACATTGCTGAGTTCTGCTGTCACTCCAGGATGGAGCCATACCTGCAGAATGGTGAGGTTTaGTTTGTTTTGCAGTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ARVDIAEFCCHSRMEPYLQNGEV*FVLQFC Trigger: ACAAAACTGCAAAACAAACAAAACCTCACCATTCTG...CAGGTATGGCTCCATCCTGGAGTGACAGCAGAACTCAGCAATGTCCACACGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR TCA 72 bp | CAGGATGGGCATAGAGAGATTCTTAGTCAGAATGTCTaGATGGGCTGTATCCCAGTCCCCAAGAGTCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: QDGHREILSQNV*MGCIPVPKSHC Trigger: ACAATGACTCTTGGGGACTGGGATACAGCCCATTCAGACATTCTGACTAAGAATCTCTCTATGCCCATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| 3UTR CCA 72 bp | CCTGAACTTCTCTGTCTGGATGCAAACATGTGGGTCTaGCGGGGAGACATTTACATTCAGTCTTTGACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PELLCLDANMWV*RGDIYIQSLTE Trigger: TTCTGTCAAAGACTGAATGTAAATGTCTCCCCGCCAGACCCACATGTTTGCATCCAGACAGAGAAGTTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| 3UTR CCA 72 bp | ATGGGCATAGAGAGATTCTTAGTCAGAATGTCTGAATaGGCTGTATCCCAGTCCCCAAGAGTCATTGTACCC | + |
|
Preference number: 3 (lower is better) Translates to: MGIERFLVRMSE*AVSQSPRVIVP Trigger: GGGTACAATGACTCTTGGGGACTGGGATACAGCCCATTCAGACATTCTGACTAAGAATCTCTCTATGCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| 3UTR CCA 72 bp | ACGAAAAACTATCCTGAAGACATGCTCAAAGCTCAATaGCCATACGTCTGGCATCACAGGTCTGGCATCACA | + |
|
Preference number: 3 (lower is better) Translates to: TKNYPEDMLKAQ*PYVWHHRSGIT Trigger: TGTGATGCCAGACCTGTGATGCCAGACGTATGGCCATTGAGCTTTGAGCATGTCTTCAGGATAGTTTTTCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| 3UTR TCA 72 bp | TTTCAGGCATCTCCCAGTCATTTTCTCTGGGCTAACTaGCAGATTCAGTCACACTGGCAGAAAGGAATACAG | + |
|
Preference number: 3 (lower is better) Translates to: FQASPSHFLWAN*QIQSHWQKGIQ Trigger: CTGTATTCCTTTCTGCCAGTGTGACTGAATCTGTCAGTTAGCCCAGAGAAAATGACTGGGAGATGCCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR CCA 72 bp | ACCTCAGAGTCCAAAGAGGCTGAGAATAGCTTATTCTaGAAGGAAGTGGTATCAGCTACCACACTGCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TSESKEAENSLF*KEVVSATTLPK Trigger: TTTTGGCAGTGTGGTAGCTGATACCACTTCCTTCCAGAATAAGCTATTCTCAGCCTCTTTGGACTCTGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR TCA 72 bp | AAGATAGGAGAAAACTCAGCAGAGAGGTATAAGCCTTaGAGCTCCGTATCTGGCATCTTGGGTACATGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: KIGENSAERYKP*SSVSGILGTWY Trigger: ATACCATGTACCCAAGATGCCAGATACGGAGCTTCAAGGCTTATACCTCTCTGCTGAGTTTTCTCCTATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR TCA 72 bp | ATAGGGTCTACAGCACCCTTAAATAACACCAAGTGTTaGACCACACAAGCCCGCAACCTTGAATCTTTTCGA | + |
|
Preference number: 3 (lower is better) Translates to: IGSTAPLNNTKC*TTQARNLESFR Trigger: TCGAAAAGATTCAAGGTTGCGGGCTTGTGTGGTTCAACACTTGGTGTTATTTAAGGGTGCTGTAGACCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR GCA 72 bp | CCTCAAACAAAGTCACGAAAAACTATCCTGAAGACATaGTCAAAGCTCAATGGCCATACGTCTGGCATCACA | + |
|
Preference number: 3 (lower is better) Translates to: PQTKSRKTILKT*SKLNGHTSGIT Trigger: TGTGATGCCAGACGTATGGCCATTGAGCTTTGAGCATGTCTTCAGGATAGTTTTTCGTGACTTTGTTTGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| 3UTR CCA 72 bp | AGAGGTATAAGCCTTGAAGCTCCGTATCTGGCATCTTaGGTACATGGTATCATCATGTATGTTCCAATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RGISLEAPYLAS*VHGIIMYVPMG Trigger: ACCCATTGGAACATACATGATGATACCATGTACCCAAGATGCCAGATACGGAGCTTCAAGGCTTATACCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR TCA 72 bp | GTCTGGGCTCATCCCTTTAACCATTACAGTCGAAGCTaGAAAACCCATTTGAAAACCCTTCATGCTGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: VWAHPFNHYSRS*KTHLKTLHAVY Trigger: ATAGACAGCATGAAGGGTTTTCAAATGGGTTTTTCAGCTTCGACTGTAATGGTTAAAGGGATGAGCCCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR TCA 72 bp | CCTTTAACCATTACAGTCGAAGCTGAAAAACCCATTTaGAAACCCTTCATGCTGTCTATCAACCTGCATGCT | + |
|
Preference number: 3 (lower is better) Translates to: PLTITVEAEKPI*KPFMLSINLHA Trigger: AGCATGCAGGTTGATAGACAGCATGAAGGGTTTTCAAATGGGTTTTTCAGCTTCGACTGTAATGGTTAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR-3UTR CAA 90 bp | GGTACATGGTATCATCATGTATGTTCCAATGGGTTTGAGGAGGCCTGTTTCCATATGGCAAATTATATCTaGGGGTTATTGATAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GTWYHHVCSNGFEEACFHMANYI*GLLIGK Trigger: CTTCCCTATCAATAACCCCAAGATATAATTTGCCAT...ATGGAAACAGGCCTCCTCAAACCCATTGGAACATACATGATGATACCATGTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR-3UTR CAA 90 bp | AATAAAAACAGCGAACATGGCTGTGCCACAGCCAAATGCTGTGCTTTGTCAAAACAGAATGGTGAGGTTTaGTTTGTTTTGCAGTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: NKNSEHGCATAKCCALSKQNGEV*FVLQFC Trigger: ACAAAACTGCAAAACAAACAAAACCTCACCATTCTG...TTTTGACAAAGCACAGCATTTGGCTGTGGCACAGCCATGTTCGCTGTTTTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| 3UTR TCA 72 bp | AAAATTTCTTCATCAGACAAATTAGTCCACTGTCTATaGGCACAGCCTCATTCATCATTACCGGAGACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KISSSDKLVHCL*AQPHSSLPETG Trigger: TCCTGTCTCCGGTAATGATGAATGAGGCTGTGCTCATAGACAGTGGACTAATTTGTCTGATGAAGAAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| 3UTR GCA 72 bp | AAACAGCGAACATGGCTGTGCCACAGCCAAATGCTGTaGTTTGTCAAAAATTTCTTCATCAGACAAATTAGT | + |
|
Preference number: 3 (lower is better) Translates to: KQRTWLCHSQML*FVKNFFIRQIS Trigger: ACTAATTTGTCTGATGAAGAAATTTTTGACAAAGCACAGCATTTGGCTGTGGCACAGCCATGTTCGCTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| 3UTR GCA 72 bp | AATAAAAACAGCGAACATGGCTGTGCCACAGCCAAATaGTGTGCTTTGTCAAAAATTTCTTCATCAGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: NKNSEHGCATAK*CALSKISSSDK Trigger: TTTGTCTGATGAAGAAATTTTTGACAAAGCACAGCATTTGGCTGTGGCACAGCCATGTTCGCTGTTTTTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| 3UTR CCA 72 bp | CTGTTCCTTTTCTTTGTTTTGAGTTCTGCTGAGGTTTaGTCTGTTGCTATGTATTGTAATACTTGTCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: LFLFFVLSSAEV*SVAMYCNTCHW Trigger: CCAGTGACAAGTATTACAATACATAGCAACAGACCAAACCTCAGCAGAACTCAAAACAAAGAAAAGGAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR TCA 90 bp | ATACGTCTGGCATCACAGGTCTGGCATCACAGGCAGGGAGCGAGAACTCTCCAGCTGGTCTTTCTCTCCTaGTCTCCAGGCGATGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IRLASQVWHHRQGARTLQLVFLS*SPGDGE Trigger: CTCTCCATCGCCTGGAGATCAGGAGAGAAAGACCAG...CTGGAGAGTTCTCGCTCCCTGCCTGTGATGCCAGACCTGTGATGCCAGACGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| 3UTR CAA 72 bp | AATCTCCCTCCTCAGGTTACCAGCGGCTCAGGAGTGTaGGGAGTTGCCACAAAGGGAGTCGCCATCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: NLPPQVTSGSGV*GVATKGVAIHD Trigger: GTCATGGATGGCGACTCCCTTTGTGGCAACTCCCAACACTCCTGAGCCGCTGGTAACCTGAGGAGGGAGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| CDS-3UTR GCA 90 bp | GCGGAGCACAAGCTGTGGACATCTCACCACATCTGCGGCTTAAGGGGGAGGCTACTGGATTCCTGGCCATaGATGTTAAGGCCTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AEHKLWTSHHICGLRGRLLDSWP*MLRPGL Trigger: AAGACCAGGCCTTAACATGCATGGCCAGGAATCCAG...TAGCCTCCCCCTTAAGCCGCAGATGTGGTGAGATGTCCACAGCTTGTGCTCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| CDS-3UTR CCA 90 bp | TCACAGGTCTGGCATCACAGGCAGGGAGCGAGAACTCTCCAGATGAAGGCAGACTCTTCACAGAGCTTCTaGGGAAAGACGGGGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQVWHHRQGARTLQMKADSSQSF*GKTGVE Trigger: CTCAACCCCCGTCTTTCCCCAGAAGCTCTGTGAAGA...GTCTGCCTTCATCTGGAGAGTTCTCGCTCCCTGCCTGTGATGCCAGACCTGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| CDS-3UTR TCA 90 bp | CTTGGGTCAGGGCTCCAGCAGCCTCTGAGAACCGTGAGAACCCAGAGAAACACTGCTGTGACTGTTAGCTaGCAGAGGACAGAGGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGSGLQQPLRTVRTQRNTAVTVS*QRTEVK Trigger: CTTTACCTCTGTCCTCTGTCAGCTAACAGTCACAGC...AGTGTTTCTCTGGGTTCTCACGGTTCTCAGAGGCTGCTGGAGCCCTGACCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR TCA 90 bp | ATACGTCTGGCATCACAGGTCTGGCATCACAGGCAGGGAGCGAGAACTCTCCAGGGTGACCTTGGGCCTTaGCAAATGCTTGTAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: IRLASQVWHHRQGARTLQGDLGP*QMLVDM Trigger: CATGTCTACAAGCATTTGTCAAGGCCCAAGGTCACC...CTGGAGAGTTCTCGCTCCCTGCCTGTGATGCCAGACCTGTGATGCCAGACGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| CDS-3UTR TCA 90 bp | AATGGCCATACGTCTGGCATCACAGGTCTGGCATCACAGGCAGGGAGCGAGAACTTGAGAAACTGTTGCTaGCTGGATTCCTGGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: NGHTSGITGLASQAGSENLRNCC*LDSWPC Trigger: GCATGGCCAGGAATCCAGTCAGCAACAGTTTCTCAA...GTTCTCGCTCCCTGCCTGTGATGCCAGACCTGTGATGCCAGACGTATGGCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| CDS-3UTR CCA 90 bp | GCACGTGTGGACATTGCTGAGTTCTGCTGTCACTCCAGGATGGAGCCATACCTGTCTTCACAGAGCTTCTaGGGAAAGACGGGGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARVDIAEFCCHSRMEPYLSSQSF*GKTGVE Trigger: CTCAACCCCCGTCTTTCCCCAGAAGCTCTGTGAAGA...CAGGTATGGCTCCATCCTGGAGTGACAGCAGAACTCAGCAATGTCCACACGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR CCA 90 bp | GCGGAGCACAAGCTGTGGACATCTCACCACATCTGCGGCTTAAGGGGGAGGCTAATGCATGTTAAGGCCTaGTCTTTCTCTCCTGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: AEHKLWTSHHICGLRGRLMHVKA*SFSPDL Trigger: GAGATCAGGAGAGAAAGACCAGGCCTTAACATGCAT...TAGCCTCCCCCTTAAGCCGCAGATGTGGTGAGATGTCCACAGCTTGTGCTCCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| 3UTR CAA 72 bp | TGGCTCCCCAGAGTTTACATTCTGCACGTGTGGACATaGCTGAGTTCTGCTGTCACTCCAGGATGGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WLPRVYILHVWT*LSSAVTPGWSH Trigger: ATGGCTCCATCCTGGAGTGACAGCAGAACTCAGCAATGTCCACACGTGCAGAATGTAAACTCTGGGGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR TCA 90 bp | GATGTTCTACAGCAAGCAAATCTCCCTCCTCAGGTTACCAGCGGCTCAGGAGTGGCTGTGACTGTTAGCTaGCAGAGGACAGAGGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DVLQQANLPPQVTSGSGVAVTVS*QRTEVK Trigger: CTTTACCTCTGTCCTCTGTCAGCTAACAGTCACAGC...CACTCCTGAGCCGCTGGTAACCTGAGGAGGGAGATTTGCTTGCTGTAGAACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| CDS-3UTR TCA 90 bp | AGAAATCTGAGCCCGAGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGATGCTGGTCTTTCTCTCCTaGTCTCCAGGCGATGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNLSPSMIQGKGLASKMMLVFLS*SPGDGE Trigger: CTCTCCATCGCCTGGAGATCAGGAGAGAAAGACCAG...CATCATCTTACTTGCCAACCCCTTTCCCTGGATCATGCTCGGGCTCAGATTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194791.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCCCTTGAGCCTGAACTTCTCTGTCTGGATGCAAACATGTGGGTCTGGCGGCTGGATTCCTGGCCATaGATGTTAAGGCCTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KALEPELLCLDANMWVWRLDSWP*MLRPGL Trigger: AAGACCAGGCCTTAACATGCATGGCCAGGAATCCAG...CCGCCAGACCCACATGTTTGCATCCAGACAGAGAAGTTCAGGCTCAAGGGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| CDS-3UTR CCA 90 bp | CTGGCATCACAGGTCTGGCATCACAGGCAGGGAGCGAGAACTCTCCAGATGAAGAGCTTCTTACCACTTTaGGGATCTGCACAGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LASQVWHHRQGARTLQMKSFLPL*GSAQWN Trigger: ATTCCACTGTGCAGATCCCCAAAGTGGTAAGAAGCT...CTTCATCTGGAGAGTTCTCGCTCCCTGCCTGTGATGCCAGACCTGTGATGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| CDS-3UTR TCA 90 bp | AGTCATTGTACCCTGAAAGCCCTTGAGCCTGAACTTCTCTGTCTGGATGCAAACCTGGTCTTTCTCTCCTaGTCTCCAGGCGATGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHCTLKALEPELLCLDANLVFLS*SPGDGE Trigger: CTCTCCATCGCCTGGAGATCAGGAGAGAAAGACCAG...GTTTGCATCCAGACAGAGAAGTTCAGGCTCAAGGGCTTTCAGGGTACAATGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| CDS-3UTR CCA 90 bp | AGAAATCTGAGCCCGAGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGATGTCTTCACAGAGCTTCTaGGGAAAGACGGGGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNLSPSMIQGKGLASKMMSSQSF*GKTGVE Trigger: CTCAACCCCCGTCTTTCCCCAGAAGCTCTGTGAAGA...CATCATCTTACTTGCCAACCCCTTTCCCTGGATCATGCTCGGGCTCAGATTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194791.2 |
||
| 3UTR CAA 72 bp | ATCAGAGGCATGGCGGCTTTAGGGGCTTGGCCTGTGTaGGAGGGAGTTTGCAATGTCTGCTTCTTCATAACA | + |
|
Preference number: 4 (lower is better) Translates to: IRGMAALGAWPV*EGVCNVCFFIT Trigger: TGTTATGAAGAAGCAGACATTGCAAACTCCCTCCAACACAGGCCAAGCCCCTAAAGCCGCCATGCCTCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR TCA 90 bp | CTAAGAAATCTGAGCCCGAGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGGCTGTGACTGTTAGCTaGCAGAGGACAGAGGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRNLSPSMIQGKGLASKMAVTVS*QRTEVK Trigger: CTTTACCTCTGTCCTCTGTCAGCTAACAGTCACAGC...CATCTTACTTGCCAACCCCTTTCCCTGGATCATGCTCGGGCTCAGATTTCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194791.2 |
||
| CDS-3UTR TCA 90 bp | AGAAATCTGAGCCCGAGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGATGGGTGACCTTGGGCCTTaGCAAATGCTTGTAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: RNLSPSMIQGKGLASKMMGDLGP*QMLVDM Trigger: CATGTCTACAAGCATTTGTCAAGGCCCAAGGTCACC...CATCATCTTACTTGCCAACCCCTTTCCCTGGATCATGCTCGGGCTCAGATTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194791.2 |
||
| CDS-3UTR TCA 90 bp | ATTGCAACAATCCATGAAAGTGTAACACAGCACCTGGCTCATAGCTGCTGGTTCCTGGTCTTTCTCTCCTaGTCTCCAGGCGATGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IATIHESVTQHLAHSCWFLVFLS*SPGDGE Trigger: CTCTCCATCGCCTGGAGATCAGGAGAGAAAGACCAG...GAACCAGCAGCTATGAGCCAGGTGCTGTGTTACACTTTCATGGATTGTTGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR TCA 90 bp | CTAAGAAATCTGAGCCCGAGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGTTGAGAAACTGTTGCTaGCTGGATTCCTGGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLSPSMIQGKGLASKMLRNCC*LDSWPC Trigger: GCATGGCCAGGAATCCAGTCAGCAACAGTTTCTCAA...CATCTTACTTGCCAACCCCTTTCCCTGGATCATGCTCGGGCTCAGATTTCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194791.2 |
||
| CDS-3UTR GCA 90 bp | AGAAATCTGAGCCCGAGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGATGCTGGATTCCTGGCCATaGATGTTAAGGCCTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RNLSPSMIQGKGLASKMMLDSWP*MLRPGL Trigger: AAGACCAGGCCTTAACATGCATGGCCAGGAATCCAG...CATCATCTTACTTGCCAACCCCTTTCCCTGGATCATGCTCGGGCTCAGATTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194791.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGTTTCCATGACCTTCCAACCAAAACCACACGTGGCCTCTTTCTCGGGTGACTCTTTACCACTTTaGGGATCTGCACAGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RPVSMTFQPKPHVASFSGDSLPL*GSAQWN Trigger: ATTCCACTGTGCAGATCCCCAAAGTGGTAAAGAGTC...ACCCGAGAAAGAGGCCACGTGTGGTTTTGGTTGGAAGGTCATGGAAACAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR TCA 90 bp | ACGTCTGGCATCACAGGTCTGGCATCACAGGCAGGGAGCGAGAACTCTCCAGATCAAGAAAGAATGTGTTaGACGTCCATACAACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSGITGLASQAGSENSPDQERMC*TSIQHS Trigger: ACTATGTTGTATGGACGTTCAACACATTCTTTCTTG...ATCTGGAGAGTTCTCGCTCCCTGCCTGTGATGCCAGACCTGTGATGCCAGACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| CDS-3UTR TCA 90 bp | AGTCATTGTACCCTGAAAGCCCTTGAGCCTGAACTTCTCTGTCTGGATGCAAACGGTGACCTTGGGCCTTaGCAAATGCTTGTAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: SHCTLKALEPELLCLDANGDLGP*QMLVDM Trigger: CATGTCTACAAGCATTTGTCAAGGCCCAAGGTCACC...GTTTGCATCCAGACAGAGAAGTTCAGGCTCAAGGGCTTTCAGGGTACAATGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| CDS-3UTR TCA 90 bp | AGCACAGCCTCATTCATCATTACCGGAGACAGGATGGGCATAGAGAGATTCTTAGCTGTGACTGTTAGCTaGCAGAGGACAGAGGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: STASFIITGDRMGIERFLAVTVS*QRTEVK Trigger: CTTTACCTCTGTCCTCTGTCAGCTAACAGTCACAGC...TAAGAATCTCTCTATGCCCATCCTGTCTCCGGTAATGATGAATGAGGCTGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| CDS-3UTR TCA 90 bp | AGGCTGAGAATAGCTTATTCTGGAAGGAAGTGGTATCAGCTACCACACTGCCAAGGTGACCTTGGGCCTTaGCAAATGCTTGTAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: RLRIAYSGRKWYQLPHCQGDLGP*QMLVDM Trigger: CATGTCTACAAGCATTTGTCAAGGCCCAAGGTCACC...TTGGCAGTGTGGTAGCTGATACCACTTCCTTCCAGAATAAGCTATTCTCAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR TCA 90 bp | GAAAACAGAGAAGAAGGCATTGTTCCTGCGGAGCACAAGCTGTGGACATCTCACTGGAACATGTCAGATTaGTTACGCAGGTGCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ENREEGIVPAEHKLWTSHWNMSD*LRRCHS Trigger: AGAATGGCACCTGCGTAATCAATCTGACATGTTCCA...GTGAGATGTCCACAGCTTGTGCTCCGCAGGAACAATGCCTTCTTCTCTGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| CDS-3UTR TCA 90 bp | CTAAGAAATCTGAGCCCGAGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGTGGAACATGTCAGATTaGTTACGCAGGTGCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRNLSPSMIQGKGLASKMWNMSD*LRRCHS Trigger: AGAATGGCACCTGCGTAATCAATCTGACATGTTCCA...CATCTTACTTGCCAACCCCTTTCCCTGGATCATGCTCGGGCTCAGATTTCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194791.2 |
||
| CDS-3UTR TCA 90 bp | ATTGCAACAATCCATGAAAGTGTAACACAGCACCTGGCTCATAGCTGCTGGTTCTTGAGAAACTGTTGCTaGCTGGATTCCTGGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: IATIHESVTQHLAHSCWFLRNCC*LDSWPC Trigger: GCATGGCCAGGAATCCAGTCAGCAACAGTTTCTCAA...GAACCAGCAGCTATGAGCCAGGTGCTGTGTTACACTTTCATGGATTGTTGCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR GCA 90 bp | GCCACAGCCAAATGCTGTGCTTTGTCAAAAATTTCTTCATCAGACAAATTAGTCTGGCACGAGTGGCTTTaGAGGCAGGGAGCTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ATAKCCALSKISSSDKLVWHEWL*RQGAGT Trigger: AGTCCCAGCTCCCTGCCTGCAAAGCCACTCGTGCCA...GACTAATTTGTCTGATGAAGAAATTTTTGACAAAGCACAGCATTTGGCTGTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| CDS-3UTR CCA 90 bp | GTGTGGACATTGCTGAGTTCTGCTGTCACTCCAGGATGGAGCCATACCTGCTTGGGAGTAGAGTCCATCTaGAAAGACTATCCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VWTLLSSAVTPGWSHTCLGVESI*KDYPFF Trigger: AAAGAAAGGATAGTCTTTCCAGATGGACTCTACTCC...CAAGCAGGTATGGCTCCATCCTGGAGTGACAGCAGAACTCAGCAATGTCCACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR CCA 90 bp | TGCAAACATGTGGGTCTGGCGGGGAGACATTTACATTCAGTCTTTGACAGAAGTAGGCGATGGAGAGGGTaGCACCATCATGAAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CKHVGLAGRHLHSVFDRSRRWRG*HHHETD Trigger: ATCAGTTTCATGATGGTGCCACCCTCTCCATCGCCT...ACTTCTGTCAAAGACTGAATGTAAATGTCTCCCCGCCAGACCCACATGTTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| CDS-3UTR CCA 90 bp | AGAAATCTGAGCCCGAGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGATGATGCATGTTAAGGCCTaGTCTTTCTCTCCTGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RNLSPSMIQGKGLASKMMMHVKA*SFSPDL Trigger: GAGATCAGGAGAGAAAGACCAGGCCTTAACATGCAT...CATCATCTTACTTGCCAACCCCTTTCCCTGGATCATGCTCGGGCTCAGATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194791.2 |
||
| CDS-3UTR CCA 90 bp | ATAGAGAGATTCTTAGTCAGAATGTCTGAATGGGCTGTATCCCAGTCCCCAAGATCTTCACAGAGCTTCTaGGGAAAGACGGGGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IERFLVRMSEWAVSQSPRSSQSF*GKTGVE Trigger: CTCAACCCCCGTCTTTCCCCAGAAGCTCTGTGAAGA...TCTTGGGGACTGGGATACAGCCCATTCAGACATTCTGACTAAGAATCTCTCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| CDS-3UTR CCA 90 bp | GGTACATGGTATCATCATGTATGTTCCAATGGGTTTGAGGAGGCCTGTTTCCATAAGTCGGGCATTTCCTaGTGCCTGTCCACTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTWYHHVCSNGFEEACFHKSGIS*CLSTLF Trigger: GAAGAGAGTGGACAGGCACCAGGAAATGCCCGACTT...ATGGAAACAGGCCTCCTCAAACCCATTGGAACATACATGATGATACCATGTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR CCA 90 bp | AGAAATCTGAGCCCGAGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGATGAGCTTCTTACCACTTTaGGGATCTGCACAGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RNLSPSMIQGKGLASKMMSFLPL*GSAQWN Trigger: ATTCCACTGTGCAGATCCCCAAAGTGGTAAGAAGCT...CATCATCTTACTTGCCAACCCCTTTCCCTGGATCATGCTCGGGCTCAGATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194791.2 |
||
| CDS-3UTR TCA 90 bp | ATAGAGAGATTCTTAGTCAGAATGTCTGAATGGGCTGTATCCCAGTCCCCAAGATTCCAGAAGCTGCTGTaGCTGTTAGCTGACAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IERFLVRMSEWAVSQSPRFQKLL*LLADRG Trigger: TCCTCTGTCAGCTAACAGTCACAGCAGCTTCTGGAA...TCTTGGGGACTGGGATACAGCCCATTCAGACATTCTGACTAAGAATCTCTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCTTGAGCCTGAACTTCTCTGTCTGGATGCAAACATGTGGGTCTGGCGGCAAGAAAGAATGTGTTaGACGTCCATACAACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: KALEPELLCLDANMWVWRQERMC*TSIQHS Trigger: ACTATGTTGTATGGACGTTCAACACATTCTTTCTTG...CCGCCAGACCCACATGTTTGCATCCAGACAGAGAAGTTCAGGCTCAAGGGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| CDS-3UTR GCA 90 bp | CAGATTCAGTCACACTGGCAGAAAGGAATACAGATTCTGGGTTTGAGGAGAGTTCTGGATTCCTGGCCATaGATGTTAAGGCCTGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QIQSHWQKGIQILGLRRVLDSWP*MLRPGL Trigger: AAGACCAGGCCTTAACATGCATGGCCAGGAATCCAG...AACTCTCCTCAAACCCAGAATCTGTATTCCTTTCTGCCAGTGTGACTGAATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR CAA 72 bp | TTGAATCTTTTCGACTCAATCCATAACACTCCCGTCTaGGCTCACAGGTCTTGGCTCAATATGCCTACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNLFDSIHNTPV*AHRSWLNMPTV Trigger: GACCGTAGGCATATTGAGCCAAGACCTGTGAGCCAAGACGGGAGTGTTATGGATTGAGTCGAAAAGATTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR CAA 72 bp | CAGTCACACTGGCAGAAAGGAATACAGATTCTGGGTTaGAGGAGAGTTCTCAGCAATTGGACGATGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSHWQKGIQILG*RRVLSNWTMNL Trigger: GAGGTTCATCGTCCAATTGCTGAGAACTCTCCTCAAACCCAGAATCTGTATTCCTTTCTGCCAGTGTGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR TCA 90 bp | AGCACAGCCTCATTCATCATTACCGGAGACAGGATGGGCATAGAGAGATTCTTATGGAACATGTCAGATTaGTTACGCAGGTGCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: STASFIITGDRMGIERFLWNMSD*LRRCHS Trigger: AGAATGGCACCTGCGTAATCAATCTGACATGTTCCA...TAAGAATCTCTCTATGCCCATCCTGTCTCCGGTAATGATGAATGAGGCTGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| CDS-3UTR TCA 90 bp | ATTAGTCCACTGTCTATGAGCACAGCCTCATTCATCATTACCGGAGACAGGATGTGGAACATGTCAGATTaGTTACGCAGGTGCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISPLSMSTASFIITGDRMWNMSD*LRRCHS Trigger: AGAATGGCACCTGCGTAATCAATCTGACATGTTCCA...CATCCTGTCTCCGGTAATGATGAATGAGGCTGTGCTCATAGACAGTGGACTAAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| CDS-3UTR TCA 90 bp | AAACATGTGGGTCTGGCGGGGAGACATTTACATTCAGTCTTTGACAGAAGTTTTTTGAGAAACTGTTGCTaGCTGGATTCCTGGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: KHVGLAGRHLHSVFDRSFLRNCC*LDSWPC Trigger: GCATGGCCAGGAATCCAGTCAGCAACAGTTTCTCAA...AAAACTTCTGTCAAAGACTGAATGTAAATGTCTCCCCGCCAGACCCACATGTTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| CDS-3UTR CCA 90 bp | CTAAGAAATCTGAGCCCGAGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGGGAGTAGAGTCCATCTaGAAAGACTATCCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRNLSPSMIQGKGLASKMGVESI*KDYPFF Trigger: AAAGAAAGGATAGTCTTTCCAGATGGACTCTACTCC...CATCTTACTTGCCAACCCCTTTCCCTGGATCATGCTCGGGCTCAGATTTCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194791.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGATGGGCATAGAGAGATTCTTAGTCAGAATGTCTGAATGGGCTGTATCCATGCATGTTAAGGCCTaGTCTTTCTCTCCTGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: DRMGIERFLVRMSEWAVSMHVKA*SFSPDL Trigger: GAGATCAGGAGAGAAAGACCAGGCCTTAACATGCAT...GGATACAGCCCATTCAGACATTCTGACTAAGAATCTCTCTATGCCCATCCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| CDS-3UTR CCA 90 bp | ATTAGTCCACTGTCTATGAGCACAGCCTCATTCATCATTACCGGAGACAGGATGGACTCTTTACCACTTTaGGGATCTGCACAGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ISPLSMSTASFIITGDRMDSLPL*GSAQWN Trigger: ATTCCACTGTGCAGATCCCCAAAGTGGTAAAGAGTC...CATCCTGTCTCCGGTAATGATGAATGAGGCTGTGCTCATAGACAGTGGACTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| 3UTR CAA 72 bp | ATAACACCAAGTGTTGAACCACACAAGCCCGCAACCTaGAATCTTTTCGACTCAATCCATAACACTCCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ITPSVEPHKPAT*NLFDSIHNTPV Trigger: GACGGGAGTGTTATGGATTGAGTCGAAAAGATTCAAGGTTGCGGGCTTGTGTGGTTCAACACTTGGTGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| 3UTR CAA 72 bp | AATACAGATTCTGGGTTTGAGGAGAGTTCTCAGCAATaGGACGATGAACCTCAGAGTCCAAAGAGGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NTDSGFEESSQQ*DDEPQSPKRLR Trigger: TCTCAGCCTCTTTGGACTCTGAGGTTCATCGTCCAATTGCTGAGAACTCTCCTCAAACCCAGAATCTGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR TCA 90 bp | AGAAATCTGAGCCCGAGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGATGCAAGAAAGAATGTGTTaGACGTCCATACAACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: RNLSPSMIQGKGLASKMMQERMC*TSIQHS Trigger: ACTATGTTGTATGGACGTTCAACACATTCTTTCTTG...CATCATCTTACTTGCCAACCCCTTTCCCTGGATCATGCTCGGGCTCAGATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194791.2 |
||
| CDS-3UTR CCA 90 bp | CAGATTCAGTCACACTGGCAGAAAGGAATACAGATTCTGGGTTTGAGGAGAGTTATGCATGTTAAGGCCTaGTCTTTCTCTCCTGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QIQSHWQKGIQILGLRRVMHVKA*SFSPDL Trigger: GAGATCAGGAGAGAAAGACCAGGCCTTAACATGCAT...AACTCTCCTCAAACCCAGAATCTGTATTCCTTTCTGCCAGTGTGACTGAATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR CCA 90 bp | AGAAATCTGAGCCCGAGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGATGGGAATAAAATGTGTTTaGTGCATCTTCTTCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RNLSPSMIQGKGLASKMMGIKCV*CIFFWS Trigger: AGACCAGAAGAAGATGCACCAAACACATTTTATTCC...CATCATCTTACTTGCCAACCCCTTTCCCTGGATCATGCTCGGGCTCAGATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194791.2 |
||
| 3UTR CAA 72 bp | AGGAGCAACTTACAGGGGAAGGGCCTGCTTTCGATTTaGAGTTCTAGAGGTTATAATCCATTGTCATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSNLQGKGLLSI*SSRGYNPLSSE Trigger: CTCTGATGACAATGGATTATAACCTCTAGAACTCAAAATCGAAAGCAGGCCCTTCCCCTGTAAGTTGCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR CCA 90 bp | TGCAAACATGTGGGTCTGGCGGGGAGACATTTACATTCAGTCTTTGACAGAAGTGGAGTAGAGTCCATCTaGAAAGACTATCCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CKHVGLAGRHLHSVFDRSGVESI*KDYPFF Trigger: AAAGAAAGGATAGTCTTTCCAGATGGACTCTACTCC...ACTTCTGTCAAAGACTGAATGTAAATGTCTCCCCGCCAGACCCACATGTTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTCCTCATCCATGACCTTAGACAGAACCCTTCTGATTTTCTTTATCATTAAGTCGGGCATTTCCTaGTGCCTGTCCACTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FFSSSMTLDRTLLIFFIIKSGIS*CLSTLF Trigger: GAAGAGAGTGGACAGGCACCAGGAAATGCCCGACTT...AATGATAAAGAAAATCAGAAGGGTTCTGTCTAAGGTCATGGATGAGGAAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| CDS-3UTR TCA 90 bp | GGTACATGGTATCATCATGTATGTTCCAATGGGTTTGAGGAGGCCTGTTTCCATCAAGAAAGAATGTGTTaGACGTCCATACAACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTWYHHVCSNGFEEACFHQERMC*TSIQHS Trigger: ACTATGTTGTATGGACGTTCAACACATTCTTTCTTG...ATGGAAACAGGCCTCCTCAAACCCATTGGAACATACATGATGATACCATGTACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR CCA 90 bp | TTTGGGCAGCCTCAAACAAAGTCACGAAAAACTATCCTGAAGACATGCTCAAAGGGAGTAGAGTCCATCTaGAAAGACTATCCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FGQPQTKSRKTILKTCSKGVESI*KDYPFF Trigger: AAAGAAAGGATAGTCTTTCCAGATGGACTCTACTCC...CTTTGAGCATGTCTTCAGGATAGTTTTTCGTGACTTTGTTTGAGGCTGCCCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| CDS-3UTR CCA 90 bp | ATAGAGAGATTCTTAGTCAGAATGTCTGAATGGGCTGTATCCCAGTCCCCAAGAGGAATAAAATGTGTTTaGTGCATCTTCTTCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IERFLVRMSEWAVSQSPRGIKCV*CIFFWS Trigger: AGACCAGAAGAAGATGCACCAAACACATTTTATTCC...TCTTGGGGACTGGGATACAGCCCATTCAGACATTCTGACTAAGAATCTCTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
||
| CDS-3UTR CCA 90 bp | CAGATTCAGTCACACTGGCAGAAAGGAATACAGATTCTGGGTTTGAGGAGAGTTGGAATAAAATGTGTTTaGTGCATCTTCTTCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QIQSHWQKGIQILGLRRVGIKCV*CIFFWS Trigger: AGACCAGAAGAAGATGCACCAAACACATTTTATTCC...AACTCTCCTCAAACCCAGAATCTGTATTCCTTTCTGCCAGTGTGACTGAATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTCCTCATCCATGACCTTAGACAGAACCCTTCTGATTTTCTTTATCATTGGAATAAAATGTGTTTaGTGCATCTTCTTCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFSSSMTLDRTLLIFFIIGIKCV*CIFFWS Trigger: AGACCAGAAGAAGATGCACCAAACACATTTTATTCC...AATGATAAAGAAAATCAGAAGGGTTCTGTCTAAGGTCATGGATGAGGAAAAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| CDS-3UTR CAA 90 bp | ATACGTCTGGCATCACAGGTCTGGCATCACAGGCAGGGAGCGAGAACTCTCCAGGGGGTTGAGAAACTGTaGCTGACTGGATTCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IRLASQVWHHRQGARTLQGVEKL*LTGFLA Trigger: GGCCAGGAATCCAGTCAGCAACAGTTTCTCAACCCC...CTGGAGAGTTCTCGCTCCCTGCCTGTGATGCCAGACCTGTGATGCCAGACGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| CDS CCA 90 bp | GAGAAACTGTTGCTGACTGGATTCCTGGCCATGCATGTTAAGGCCTaGTCTTTCTCTCCTGATCTCCAGGCGATGGAGAGGGTGGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: EKLLLTGFLAMHVKA*SFSPDLQAMERVAP Trigger: TGGTGCCACCCTCTCCATCGCCTGGAGATCAGGAGAGAAAGACCAGGCCTTAACATGCATGGCCAGGAATCCAGTCAGCAACAGTTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
||
| CDS-3UTR CAA 90 bp | TCACAGGTCTGGCATCACAGGCAGGGAGCGAGAACTCTCCAGATGAAGGCAGACATCCAGGGAAAGGGGTaGGCAAGTAAGATGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SQVWHHRQGARTLQMKADIQGKG*ASKMML Trigger: GAGCATCATCTTACTTGCCAACCCCTTTCCCTGGAT...GTCTGCCTTCATCTGGAGAGTTCTCGCTCCCTGCCTGTGATGCCAGACCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
||
| CDS CCA 90 bp | CCCCTGAGTGAAGTTAGATCCGTGGCAGCATCTTCACAGAGCTTCTaGGGAAAGACGGGGGTTGAGAAACTGTTGCTGACTGGATTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLSEVRSVAASSQSF*GKTGVEKLLLTGFL Trigger: CAGGAATCCAGTCAGCAACAGTTTCTCAACCCCCGTCTTTCCCCAGAAGCTCTGTGAAGATGCTGCCACGGATCTAACTTCACTCAGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
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| CDS-3UTR CAA 90 bp | AAAGCCCTTGAGCCTGAACTTCTCTGTCTGGATGCAAACATGTGGGTCTGGCGGCAGGTGCCATTCTTGTaGCTTTGCCGATCTATGGTG | + |
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Preference number: 5 (lower is better) Translates to: KALEPELLCLDANMWVWRQVPFL*LCRSMV Trigger: CACCATAGATCGGCAAAGCAACAAGAATGGCACCTG...CCGCCAGACCCACATGTTTGCATCCAGACAGAGAAGTTCAGGCTCAAGGGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
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| CDS-3UTR CAA 90 bp | CTAAGAAATCTGAGCCCGAGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGGGGGTTGAGAAACTGTaGCTGACTGGATTCCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: LRNLSPSMIQGKGLASKMGVEKL*LTGFLA Trigger: GGCCAGGAATCCAGTCAGCAACAGTTTCTCAACCCC...CATCTTACTTGCCAACCCCTTTCCCTGGATCATGCTCGGGCTCAGATTTCTTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194791.2 |
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| CDS-3UTR CAA 90 bp | ATACGTCTGGCATCACAGGTCTGGCATCACAGGCAGGGAGCGAGAACTCTCCAGGTCATTCTTCTTCAATaGGCTGAGCTTCATGGAGTA | + |
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Preference number: 5 (lower is better) Translates to: IRLASQVWHHRQGARTLQVILLQ*AELHGV Trigger: TACTCCATGAAGCTCAGCCAATTGAAGAAGAATGAC...CTGGAGAGTTCTCGCTCCCTGCCTGTGATGCCAGACCTGTGATGCCAGACGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
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| CDS-3UTR CAA 90 bp | CAAAGCAGATGTTCTACAGCAAGCAAATCTCCCTCCTCAGGTTACCAGCGGCTCGTGGAACATGTCAGATaGATTACGCAGGTGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: QSRCSTASKSPSSGYQRLVEHVR*ITQVPF Trigger: GAATGGCACCTGCGTAATCAATCTGACATGTTCCAC...GAGCCGCTGGTAACCTGAGGAGGGAGATTTGCTTGCTGTAGAACATCTGCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
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| CDS-3UTR CAA 90 bp | AGCACAGCCTCATTCATCATTACCGGAGACAGGATGGGCATAGAGAGATTCTTAGGGGTTGAGAAACTGTaGCTGACTGGATTCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: STASFIITGDRMGIERFLGVEKL*LTGFLA Trigger: GGCCAGGAATCCAGTCAGCAACAGTTTCTCAACCCC...TAAGAATCTCTCTATGCCCATCCTGTCTCCGGTAATGATGAATGAGGCTGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
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| CDS-3UTR CAA 90 bp | GGAGCACAAGCTGTGGACATCTCACCACATCTGCGGCTTAAGGGGGAGGCTACATGGAATAAAATGTGTTaGGTGCATCTTCTTCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: GAQAVDISPHLRLKGEATWNKMC*VHLLLV Trigger: GACCAGAAGAAGATGCACCAAACACATTTTATTCCA...TGTAGCCTCCCCCTTAAGCCGCAGATGTGGTGAGATGTCCACAGCTTGTGCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
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| CDS-3UTR CAA 90 bp | AGAAATCTGAGCCCGAGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGATGGTGGAACATGTCAGATaGATTACGCAGGTGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: RNLSPSMIQGKGLASKMMVEHVR*ITQVPF Trigger: GAATGGCACCTGCGTAATCAATCTGACATGTTCCAC...CATCATCTTACTTGCCAACCCCTTTCCCTGGATCATGCTCGGGCTCAGATTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194791.2 |
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| CDS CCA 90 bp | AGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGATGCTCAGCTaGACAGCTTCTTACCACTTTGGGGATCTGCACAGTGGAATAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SMIQGKGLASKMMLS*TASYHFGDLHSGIK Trigger: TTTTATTCCACTGTGCAGATCCCCAAAGTGGTAAGAAGCTGTCCAGCTGAGCATCATCTTACTTGCCAACCCCTTTCCCTGGATCATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194531.6 |
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| CDS-3UTR CAA 90 bp | AATAAAAACAGCGAACATGGCTGTGCCACAGCCAAATGCTGTGCTTTGTCAAAAGGGGTTGAGAAACTGTaGCTGACTGGATTCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NKNSEHGCATAKCCALSKGVEKL*LTGFLA Trigger: GGCCAGGAATCCAGTCAGCAACAGTTTCTCAACCCC...TTTTGACAAAGCACAGCATTTGGCTGTGGCACAGCCATGTTCGCTGTTTTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
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| CDS-3UTR CAA 90 bp | ATTAGTCCACTGTCTATGAGCACAGCCTCATTCATCATTACCGGAGACAGGATGCAAAGCTTAATGACCTaGGCACGAGTGGCTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ISPLSMSTASFIITGDRMQSLMT*ARVALQ Trigger: CTGCAAAGCCACTCGTGCCAAGGTCATTAAGCTTTG...CATCCTGTCTCCGGTAATGATGAATGAGGCTGTGCTCATAGACAGTGGACTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
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| CDS-3UTR CAA 90 bp | GCCTCATTCATCATTACCGGAGACAGGATGGGCATAGAGAGATTCTTAGTCAGACAAAGCTTAATGACCTaGGCACGAGTGGCTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ASFIITGDRMGIERFLVRQSLMT*ARVALQ Trigger: CTGCAAAGCCACTCGTGCCAAGGTCATTAAGCTTTG...TCTGACTAAGAATCTCTCTATGCCCATCCTGTCTCCGGTAATGATGAATGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
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| CDS-3UTR CAA 90 bp | CTAAGAAATCTGAGCCCGAGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGGTCATTCTTCTTCAATaGGCTGAGCTTCATGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LRNLSPSMIQGKGLASKMVILLQ*AELHGV Trigger: TACTCCATGAAGCTCAGCCAATTGAAGAAGAATGAC...CATCTTACTTGCCAACCCCTTTCCCTGGATCATGCTCGGGCTCAGATTTCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194791.2 |
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| CDS-3UTR CAA 90 bp | ATCTTGGGTACATGGTATCATCATGTATGTTCCAATGGGTTTGAGGAGGCCTGTGTGGAACATGTCAGATaGATTACGCAGGTGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: ILGTWYHHVCSNGFEEACVEHVR*ITQVPF Trigger: GAATGGCACCTGCGTAATCAATCTGACATGTTCCAC...ACAGGCCTCCTCAAACCCATTGGAACATACATGATGATACCATGTACCCAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| CDS-3UTR CAA 90 bp | CTAAGAAATCTGAGCCCGAGCATGATCCAGGGAAAGGGGTTGGCAAGTAAGATGTGGAATAAAATGTGTTaGGTGCATCTTCTTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LRNLSPSMIQGKGLASKMWNKMC*VHLLLV Trigger: GACCAGAAGAAGATGCACCAAACACATTTTATTCCA...CATCTTACTTGCCAACCCCTTTCCCTGGATCATGCTCGGGCTCAGATTTCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194791.2 |
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| CDS TCA 90 bp | AAATCTCTGCACGGTAGGCTCCAGAGTCATTCTTCTTCAATTGGCTaGGCTTCATGGAGTAGAGTCCATCTGGAAAGACTATCCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KSLHGRLQSHSSSIG*ASWSRVHLERLSFL Trigger: AAGAAAGGATAGTCTTTCCAGATGGACTCTACTCCATGAAGCTCAGCCAATTGAAGAAGAATGACTCTGGAGCCTACCGTGCAGAGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
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| CDS-3UTR CAA 90 bp | ATTGCAACAATCCATGAAAGTGTAACACAGCACCTGGCTCATAGCTGCTGGTTCGTCATTCTTCTTCAATaGGCTGAGCTTCATGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: IATIHESVTQHLAHSCWFVILLQ*AELHGV Trigger: TACTCCATGAAGCTCAGCCAATTGAAGAAGAATGAC...GAACCAGCAGCTATGAGCCAGGTGCTGTGTTACACTTTCATGGATTGTTGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192195.6 |
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| CDS-3UTR CAA 90 bp | AAACATGTGGGTCTGGCGGGGAGACATTTACATTCAGTCTTTGACAGAAGTTTTGTGGAACATGTCAGATaGATTACGCAGGTGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: KHVGLAGRHLHSVFDRSFVEHVR*ITQVPF Trigger: GAATGGCACCTGCGTAATCAATCTGACATGTTCCAC...AAAACTTCTGTCAAAGACTGAATGTAAATGTCTCCCCGCCAGACCCACATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
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| CDS-3UTR CAA 90 bp | AATAAAAACAGCGAACATGGCTGTGCCACAGCCAAATGCTGTGCTTTGTCAAAAGTCATTCTTCTTCAATaGGCTGAGCTTCATGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: NKNSEHGCATAKCCALSKVILLQ*AELHGV Trigger: TACTCCATGAAGCTCAGCCAATTGAAGAAGAATGAC...TTTTGACAAAGCACAGCATTTGGCTGTGGCACAGCCATGTTCGCTGTTTTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
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| CDS-3UTR CAA 90 bp | ATAAATGTGAATAAAAACAGCGAACATGGCTGTGCCACAGCCAAATGCTGTGCTTGGAATAAAATGTGTTaGGTGCATCTTCTTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: INVNKNSEHGCATAKCCAWNKMC*VHLLLV Trigger: GACCAGAAGAAGATGCACCAAACACATTTTATTCCA...AGCACAGCATTTGGCTGTGGCACAGCCATGTTCGCTGTTTTTATTCACATTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
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| CDS-3UTR CAA 90 bp | TGTGCCACAGCCAAATGCTGTGCTTTGTCAAAAATTTCTTCATCAGACAAATTATGGAATAAAATGTGTTaGGTGCATCTTCTTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CATAKCCALSKISSSDKLWNKMC*VHLLLV Trigger: GACCAGAAGAAGATGCACCAAACACATTTTATTCCA...TAATTTGTCTGATGAAGAAATTTTTGACAAAGCACAGCATTTGGCTGTGGCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192024.6 ENSMUST00000192195.6 |
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| CDS TCA 72 bp | GCTTCTGGGGAAAGACGGGGGTTGAGAAACTGTTGCTaGCTGGATTCCTGGCCATGCATGTTAAGGCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ASGERRGLRNCC*LDSWPCMLRPG Trigger: ACCAGGCCTTAACATGCATGGCCAGGAATCCAGTCAGCAACAGTTTCTCAACCCCCGTCTTTCCCCAGAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
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| CDS CAA 72 bp | CAGAGCTTCTGGGGAAAGACGGGGGTTGAGAAACTGTaGCTGACTGGATTCCTGGCCATGCATGTTAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QSFWGKTGVEKL*LTGFLAMHVKA Trigger: GGCCTTAACATGCATGGCCAGGAATCCAGTCAGCAACAGTTTCTCAACCCCCGTCTTTCCCCAGAAGCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
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| CDS CCA 72 bp | TTAAGGCCTGGTCTTTCTCTCCTGATCTCCAGGCGATaGAGAGGGTGGCACCATCATGAAACTGATTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LRPGLSLLISRR*RGWHHHETDCP Trigger: GGGACAATCAGTTTCATGATGGTGCCACCCTCTCCATCGCCTGGAGATCAGGAGAGAAAGACCAGGCCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
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| CDS CAA 90 bp | GCATCTTCACAGAGCTTCTGGGGAAAGACGGGGGTTGAGAAACTGTaGCTGACTGGATTCCTGGCCATGCATGTTAAGGCCTGGTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASSQSFWGKTGVEKL*LTGFLAMHVKAWSF Trigger: GAAAGACCAGGCCTTAACATGCATGGCCAGGAATCCAGTCAGCAACAGTTTCTCAACCCCCGTCTTTCCCCAGAAGCTCTGTGAAGATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
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| CDS TCA 72 bp | GCACTGCTGAGAAGCACAGGATGTATAGGATGCCCCTaGGTGAAGTTAGATCCGTGGCAGCATCTTCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: ALLRSTGCIGCP*VKLDPWQHLHR Trigger: TCTGTGAAGATGCTGCCACGGATCTAACTTCACTCAGGGGCATCCTATACATCCTGTGCTTCTCAGCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
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| CDS CCA 72 bp | GAAGTTAGATCCGTGGCAGCATCTTCACAGAGCTTCTaGGGAAAGACGGGGGTTGAGAAACTGTTGCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: EVRSVAASSQSF*GKTGVEKLLLT Trigger: AGTCAGCAACAGTTTCTCAACCCCCGTCTTTCCCCAGAAGCTCTGTGAAGATGCTGCCACGGATCTAACTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
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| CDS TCA 72 bp | CATTCTCCCCGTCCTGATCCGTGGAACATGTCAGATTaGTTACGCAGGTGCCATTCTTGTTGCTTTGCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: HSPRPDPWNMSD*LRRCHSCCFAD Trigger: ATCGGCAAAGCAACAAGAATGGCACCTGCGTAATCAATCTGACATGTTCCACGGATCAGGACGGGGAGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
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| CDS CCA 72 bp | GCTTTGCAGGCAGGGAGCTGGGACTCTTTACCACTTTaGGGATCTGCACAGTGGAATAAAATGTGTTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ALQAGSWDSLPL*GSAQWNKMCLV Trigger: CACCAAACACATTTTATTCCACTGTGCAGATCCCCAAAGTGGTAAAGAGTCCCAGCTCCCTGCCTGCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 |
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| CDS CAA 72 bp | CATTTTCAAAGCTTAATGACCTTGGCACGAGTGGCTTaGCAGGCAGGGAGCTGGGACTCTTTACCACTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HFQSLMTLARVA*QAGSWDSLPLW Trigger: CCAAAGTGGTAAAGAGTCCCAGCTCCCTGCCTGCAAAGCCACTCGTGCCAAGGTCATTAAGCTTTGAAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111276.9 ENSMUST00000192195.6 |
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| CDS TCA 72 bp | CTTGTTGCTTTGCCGATCTATGGTGACCTTGGGCCTTaGCAAATGCTTGTAGACATGCAGCACATACTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LVALPIYGDLGP*QMLVDMQHILL Trigger: CAGGAGTATGTGCTGCATGTCTACAAGCATTTGTCAAGGCCCAAGGTCACCATAGATCGGCAAAGCAACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
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| CDS GCA 72 bp | GTCAGATTGATTACGCAGGTGCCATTCTTGTTGCTTTaGCGATCTATGGTGACCTTGGGCCTTGACAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: VRLITQVPFLLL*RSMVTLGLDKC Trigger: GCATTTGTCAAGGCCCAAGGTCACCATAGATCGGCAAAGCAACAAGAATGGCACCTGCGTAATCAATCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
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| CDS CAA 72 bp | CTCTGCACGGTAGGCTCCAGAGTCATTCTTCTTCAATaGGCTGAGCTTCATGGAGTAGAGTCCATCTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LCTVGSRVILLQ*AELHGVESIWK Trigger: TTTCCAGATGGACTCTACTCCATGAAGCTCAGCCAATTGAAGAAGAATGACTCTGGAGCCTACCGTGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
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| CDS CAA 72 bp | GAACATGTCAGATTGATTACGCAGGTGCCATTCTTGTaGCTTTGCCGATCTATGGTGACCTTGGGCCTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: EHVRLITQVPFL*LCRSMVTLGLD Trigger: GTCAAGGCCCAAGGTCACCATAGATCGGCAAAGCAACAAGAATGGCACCTGCGTAATCAATCTGACATGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
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| CDS CAA 72 bp | GTGGAACATGTCAGATTGATTACGCAGGTGCCATTCTaGTTGCTTTGCCGATCTATGGTGACCTTGGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VEHVRLITQVPF*LLCRSMVTLGL Trigger: AAGGCCCAAGGTCACCATAGATCGGCAAAGCAACAAGAATGGCACCTGCGTAATCAATCTGACATGTTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
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| CDS TCA 72 bp | CACGGTAGGCTCCAGAGTCATTCTTCTTCAATTGGCTaGGCTTCATGGAGTAGAGTCCATCTGGAAAGACTA | + |
|
Preference number: 6 (lower is better) Translates to: HGRLQSHSSSIG*ASWSRVHLERL Trigger: TAGTCTTTCCAGATGGACTCTACTCCATGAAGCTCAGCCAATTGAAGAAGAATGACTCTGGAGCCTACCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
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| CDS CAA 90 bp | ACTGTAAATCTCTGCACGGTAGGCTCCAGAGTCATTCTTCTTCAATaGGCTGAGCTTCATGGAGTAGAGTCCATCTGGAAAGACTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: TVNLCTVGSRVILLQ*AELHGVESIWKDYP Trigger: AGGATAGTCTTTCCAGATGGACTCTACTCCATGAAGCTCAGCCAATTGAAGAAGAATGACTCTGGAGCCTACCGTGCAGAGATTTACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 ENSMUST00000194531.6 ENSMUST00000194791.2 |
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| CDS CCA 72 bp | AGCTGGGACTCTTTACCACTTTGGGGATCTGCACAGTaGAATAAAATGTGTTTGGTGCATCTTCTTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SWDSLPLWGSAQ*NKMCLVHLLLV Trigger: GACCAGAAGAAGATGCACCAAACACATTTTATTCCACTGTGCAGATCCCCAAAGTGGTAAAGAGTCCCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111276.9 ENSMUST00000192024.6 ENSMUST00000192195.6 |
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