Pregenerated sensors for SLAMF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015316Ensembl transcript IDs: ENSMUST00000015460.5
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGCAGATCCGTCACCAGGGAACTGATTGGAGAAGGTTACAGATGTaGAGTTTCTGTCACAGAGAACTTGGGACCCGGGGTCCAGTTCAG | + |
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Preference number: 1 (lower is better) Translates to: VQIRHQGTDWRRLQM*SFCHRELGTRGPVQ Trigger: CTGAACTGGACCCCGGGTCCCAAGTTCTCTGTGACAGAAACTGCACATCTGTAACCTTCTCCAATCAGTTCCCTGGTGACGGATCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CCA 90 bp | GTATGCATGTATATGTGTATCACTGTGCGTGTATGTGTGTGTGTGTaGGGGGAGTATCTTCCTCTGTCACTCTCAGGGGACTTGACATTT | + |
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Preference number: 1 (lower is better) Translates to: VCMYMCITVRVCVCV*GEYLPLSLSGDLTF Trigger: AAATGTCAAGTCCCCTGAGAGTGACAGAGGAAGATACTCCCCCCACACACACACACATACACGCACAGTGATACACATATACATGCATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR GCA 90 bp | TCTGAGTATTCCAGGCAACTTTACAGCAGCATTGCCAAACAGTGTTaGTTTGACTTAATCAGAGAACCACACTTTGAAGAACATTGGATG | + |
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Preference number: 1 (lower is better) Translates to: SEYSRQLYSSIAKQC*FDLIREPHFEEHWM Trigger: CATCCAATGTTCTTCAAAGTGTGGTTCTCTGATTAAGTCAAAGCAACACTGTTTGGCAATGCTGCTGTAAAGTTGCCTGGAATACTCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CCA 90 bp | ATGTTACTGGCACACTCAACCACACTTATCTTTTTACATGGACACTaGGAGTTTGAACCCAGATCTTCATGTTTGCAAAGCAAGTACTAT | + |
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Preference number: 1 (lower is better) Translates to: MLLAHSTTLIFLHGH*EFEPRSSCLQSKYY Trigger: ATAGTACTTGCTTTGCAAACATGAAGATCTGGGTTCAAACTCCCAGTGTCCATGTAAAAAGATAAGTGTGGTTGAGTGTGCCAGTAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCTCTGTCACTCTCAGGGGACTTGACATTTATGCCTGGCTGGGAAGGCTAGGGTCCAGTTCAGTGTaGATTTTGGTTCTTCTATCC | + |
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Preference number: 2 (lower is better) Translates to: SSSVTLRGLDIYAWLGRLGSSSV*ILVLLS Trigger: GGATAGAAGAACCAAAATCCACACTGAACTGGACCC...TAGCCTTCCCAGCCAGGCATAAATGTCAAGTCCCCTGAGAGTGACAGAGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CAA 90 bp | CTGATTGGAGAAGGTTACAGATGTGCAGTTTCTGTCACAGAGAACTaGGGACCCGGGGTCCAGTTCAGTGTGGATTTTGGTTCTTCTATC | + |
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Preference number: 2 (lower is better) Translates to: LIGEGYRCAVSVTEN*GPGVQFSVDFGSSI Trigger: GATAGAAGAACCAAAATCCACACTGAACTGGACCCCGGGTCCCAAGTTCTCTGTGACAGAAACTGCACATCTGTAACCTTCTCCAATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CAA 90 bp | CTGTCACAGAGAACTTGGGACCCGGGGTCCAGTTCAGTGTGGATTTaGGTTCTTCTATCCTCCTTCAAAAAGTCCTTTCACTGGGTATAT | + |
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Preference number: 2 (lower is better) Translates to: LSQRTWDPGSSSVWI*VLLSSFKKSFHWVY Trigger: ATATACCCAGTGAAAGGACTTTTTGAAGGAGGATAGAAGAACCAAAATCCACACTGAACTGGACCCCGGGTCCCAAGTTCTCTGTGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAAAGATGGTACACTGTACCACGGGATCTCTGCTTCATATCTGTGTCAGCAGAAGGTTACAGATGTaGAGTTTCTGTCACAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: TAKMVHCTTGSLLHICVSRRLQM*SFCHRE Trigger: TTCTCTGTGACAGAAACTGCACATCTGTAACCTTCT...GCTGACACAGATATGAAGCAGAGATCCCGTGGTACAGTGTACCATCTTTGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR-3UTR TCA 90 bp | TCTTTTTACATGGACACTGGGAGTTTGAACCCAGATCTTCATGTTTGCAAAGCACACAGAGGTATGCAGTaGGATAGGAAGTGGGTGATA | + |
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Preference number: 2 (lower is better) Translates to: SFYMDTGSLNPDLHVCKAHRGMQ*DRKWVI Trigger: TATCACCCACTTCCTATCTCACTGCATACCTCTGTG...TGCTTTGCAAACATGAAGATCTGGGTTCAAACTCCCAGTGTCCATGTAAAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR-3UTR CCA 90 bp | TCTTTTTACATGGACACTGGGAGTTTGAACCCAGATCTTCATGTTTGCAAAGCACACCAGGGAACTGATTaGAGAAGGTTACAGATGTGC | + |
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Preference number: 2 (lower is better) Translates to: SFYMDTGSLNPDLHVCKAHQGTD*RRLQMC Trigger: GCACATCTGTAACCTTCTCCAATCAGTTCCCTGGTG...TGCTTTGCAAACATGAAGATCTGGGTTCAAACTCCCAGTGTCCATGTAAAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR-3UTR TCA 90 bp | GAGGACAGACAACGTGAAGAATATAGGACTTTATATAGACTCTACCTACATCCTTGGGACAAGTTCCTCTaGGTATTCCAGGCAACTTTA | + |
|
Preference number: 2 (lower is better) Translates to: EDRQREEYRTLYRLYLHPWDKFL*VFQATL Trigger: TAAAGTTGCCTGGAATACTCAGAGGAACTTGTCCCA...AGGATGTAGGTAGAGTCTATATAAAGTCCTATATTCTTCACGTTGTCTGTCCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CAA 90 bp | CATTTAGACCTCTCCCCATCTCCACAATGGTTATTTTTAAAGTATTaGCCAAAGTTGTGCAAGAAGGAAGATAGGTTGAAAGATGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: HLDLSPSPQWLFLKY*PKLCKKEDRLKDGL Trigger: GAGACCATCTTTCAACCTATCTTCCTTCTTGCACAACTTTGGCAAATACTTTAAAAATAACCATTGTGGAGATGGGGAGAGGTCTAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CAA 90 bp | TTATTTTTAAAGTATTTGCCAAAGTTGTGCAAGAAGGAAGATAGGTaGAAAGATGGTCTCTCTGAGGACAGACAACGTGAAGAATATAGG | + |
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Preference number: 2 (lower is better) Translates to: LFLKYLPKLCKKEDR*KDGLSEDRQREEYR Trigger: CCTATATTCTTCACGTTGTCTGTCCTCAGAGAGACCATCTTTCAACCTATCTTCCTTCTTGCACAACTTTGGCAAATACTTTAAAAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CCA 72 bp | TCCTCTGTCACTCTCAGGGGACTTGACATTTATGCCTaGCTGGGAAGGCTAGGGAGCAAAGTCTCAGGACCT | + |
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Preference number: 3 (lower is better) Translates to: SSVTLRGLDIYA*LGRLGSKVSGP Trigger: AGGTCCTGAGACTTTGCTCCCTAGCCTTCCCAGCCAGGCATAAATGTCAAGTCCCCTGAGAGTGACAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR GCA 72 bp | CGTCACCAGGGAACTGATTGGAGAAGGTTACAGATGTaGAGTTTCTGTCACAGAGAACTTGGGACCCGGGGT | + |
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Preference number: 3 (lower is better) Translates to: RHQGTDWRRLQM*SFCHRELGTRG Trigger: ACCCCGGGTCCCAAGTTCTCTGTGACAGAAACTGCACATCTGTAACCTTCTCCAATCAGTTCCCTGGTGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CCA 72 bp | TATATGTGTATCACTGTGCGTGTATGTGTGTGTGTGTaGGGGGAGTATCTTCCTCTGTCACTCTCAGGGGAC | + |
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Preference number: 3 (lower is better) Translates to: YMCITVRVCVCV*GEYLPLSLSGD Trigger: GTCCCCTGAGAGTGACAGAGGAAGATACTCCCCCCACACACACACACATACACGCACAGTGATACACATATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR GCA 72 bp | TGCTTCATATCTGTGTCAGCAGCAGAGCAGGTTGCATaGCCAGGAAGCCTCACTTCTCATCTACTTCATAAG | + |
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Preference number: 3 (lower is better) Translates to: CFISVSAAEQVA*PGSLTSHLLHK Trigger: CTTATGAAGTAGATGAGAAGTGAGGCTTCCTGGGCATGCAACCTGCTCTGCTGCTGACACAGATATGAAGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CCA 72 bp | AAGGTTACAGATGTGCAGTTTCTGTCACAGAGAACTTaGGACCCGGGGTCCAGTTCAGTGTGGATTTTGGTT | + |
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Preference number: 3 (lower is better) Translates to: KVTDVQFLSQRT*DPGSSSVWILV Trigger: AACCAAAATCCACACTGAACTGGACCCCGGGTCCCAAGTTCTCTGTGACAGAAACTGCACATCTGTAACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR TCA 72 bp | TACTACACAGAGGTATGCAGTGAGATAGGAAGTGGGTaGTACACATGTAGATCCACAGGAGGCCTAGGCTAT | + |
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Preference number: 3 (lower is better) Translates to: YYTEVCSEIGSG*YTCRSTGGLGY Trigger: ATAGCCTAGGCCTCCTGTGGATCTACATGTGTATCACCCACTTCCTATCTCACTGCATACCTCTGTGTAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CCA 72 bp | AGATGCCTAAACCCACATTATCTGCTACAGCAAAGATaGTACACTGTACCACGGGATCTCTGCTTCATATCT | + |
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Preference number: 3 (lower is better) Translates to: RCLNPHYLLQQR*YTVPRDLCFIS Trigger: AGATATGAAGCAGAGATCCCGTGGTACAGTGTACCATCTTTGCTGTAGCAGATAATGTGGGTTTAGGCATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR TCA 72 bp | TATAAAATGGCCTCAGAACCAACGGAGAGAGACTCTTaGGGTTCCAGAGTTTTGCTCAAGGGAATAAACAGA | + |
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Preference number: 3 (lower is better) Translates to: YKMASEPTERDS*GSRVLLKGINR Trigger: TCTGTTTATTCCCTTGAGCAAAACTCTGGAACCTCAAGAGTCTCTCTCCGTTGGTTCTGAGGCCATTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR GCA 72 bp | TTTGAGTTCTGTTATCCAGTCCAGCAAAGAGTGAGATaGCTAAACCCACATTATCTGCTACAGCAAAGATGG | + |
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Preference number: 3 (lower is better) Translates to: FEFCYPVQQRVR*LNPHYLLQQRW Trigger: CCATCTTTGCTGTAGCAGATAATGTGGGTTTAGGCATCTCACTCTTTGCTGGACTGGATAACAGAACTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CCA 72 bp | GCACACTCAACCACACTTATCTTTTTACATGGACACTaGGAGTTTGAACCCAGATCTTCATGTTTGCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: AHSTTLIFLHGH*EFEPRSSCLQS Trigger: GCTTTGCAAACATGAAGATCTGGGTTCAAACTCCCAGTGTCCATGTAAAAAGATAAGTGTGGTTGAGTGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CCA 72 bp | GAGCAAAGTCTCAGGACCTATCTGTGTCTATGTTACTaGCACACTCAACCACACTTATCTTTTTACATGGAC | + |
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Preference number: 3 (lower is better) Translates to: EQSLRTYLCLCY*HTQPHLSFYMD Trigger: GTCCATGTAAAAAGATAAGTGTGGTTGAGTGTGCCAGTAACATAGACACAGATAGGTCCTGAGACTTTGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR GCA 72 bp | TCCAGGCAACTTTACAGCAGCATTGCCAAACAGTGTTaGTTTGACTTAATCAGAGAACCACACTTTGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: SRQLYSSIAKQC*FDLIREPHFEE Trigger: TTCTTCAAAGTGTGGTTCTCTGATTAAGTCAAAGCAACACTGTTTGGCAATGCTGCTGTAAAGTTGCCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR-3UTR CAA 90 bp | TCTTTTTACATGGACACTGGGAGTTTGAACCCAGATCTTCATGTTTGCAAAGCATCAGAGAACCACACTTaGAAGAACATTGGATGGATT | + |
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Preference number: 3 (lower is better) Translates to: SFYMDTGSLNPDLHVCKASENHT*KNIGWI Trigger: AATCCATCCAATGTTCTTCAAAGTGTGGTTCTCTGA...TGCTTTGCAAACATGAAGATCTGGGTTCAAACTCCCAGTGTCCATGTAAAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR TCA 72 bp | AGCCAAAATGGCTTTTATACTTTGTGCTCAGCCATCTaGGATGGAGTCTATGTCTTTGGCTTGTTGGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: SQNGFYTLCSAI*DGVYVFGLLVF Trigger: AAAAACCAACAAGCCAAAGACATAGACTCCATCTCAGATGGCTGAGCACAAAGTATAAAAGCCATTTTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR TCA 72 bp | AACCACACTTATCTTTTTACATGGACACTGGGAGTTTaGACCCAGATCTTCATGTTTGCAAAGCAAGTACTA | + |
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Preference number: 3 (lower is better) Translates to: NHTYLFTWTLGV*TQIFMFAKQVL Trigger: TAGTACTTGCTTTGCAAACATGAAGATCTGGGTTCAAACTCCCAGTGTCCATGTAAAAAGATAAGTGTGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR CCA 90 bp | CATATCTGTGTCAGCAGCAGAGCAGGTTGCATGCCCAGGAAGCCTCACTTCTCAGTGGGGTTTGGTTCCTaGACAGACTCTGGGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: HICVSSRAGCMPRKPHFSVGFGS*TDSGAG Trigger: GCCTGCCCCAGAGTCTGTCCAGGAACCAAACCCCAC...TGAGAAGTGAGGCTTCCTGGGCATGCAACCTGCTCTGCTGCTGACACAGATATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR GCA 90 bp | GGGGAGTATCTTCCTCTGTCACTCTCAGGGGACTTGACATTTATGCCTGGCTGGCCCCTTTCTTCACTGTaGAGGCCAACAGCAAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GEYLPLSLSGDLTFMPGWPLSSL*RPTASC Trigger: GCAGCTTGCTGTTGGCCTGCACAGTGAAGAAAGGGG...CCAGCCAGGCATAAATGTCAAGTCCCCTGAGAGTGACAGAGGAAGATACTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR CCA 90 bp | CATATCTGTGTCAGCAGCAGAGCAGGTTGCATGCCCAGGAAGCCTCACTTCTCAAACTGTGGTGGGGTTTaGTTCCTGGACAGACTCTGG | + |
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Preference number: 4 (lower is better) Translates to: HICVSSRAGCMPRKPHFSNCGGV*FLDRLW Trigger: CCAGAGTCTGTCCAGGAACCAAACCCCACCACAGTT...TGAGAAGTGAGGCTTCCTGGGCATGCAACCTGCTCTGCTGCTGACACAGATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR CCA 90 bp | GCCCTTGGCCTTGAGGTGATCAGGATCAGCTTCCAGAATAAAGTCCAGAGAGCCTGGCAGCCACATAAATaGTTGTGCAGGGGTCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: ALGLEVIRISFQNKVQRAWQPHK*LCRGPD Trigger: ATCAGGACCCCTGCACAACCATTTATGTGGCTGCCA...GGCTCTCTGGACTTTATTCTGGAAGCTGATCCTGATCACCTCAAGGCCAAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR CCA 90 bp | GAGGACAGACAACGTGAAGAATATAGGACTTTATATAGACTCTACCTACATCCTGGAGGTGGGAGCGGTTaGCTCGGCTCAGCAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: EDRQREEYRTLYRLYLHPGGGSG*LGSAGG Trigger: CCCACCTGCTGAGCCGAGCCAACCGCTCCCACCTCC...AGGATGTAGGTAGAGTCTATATAAAGTCCTATATTCTTCACGTTGTCTGTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR CCA 90 bp | GCAAAGAGTGAGATGCCTAAACCCACATTATCTGCTACAGCAAAGATGGTACACTTCCTGGACAGACTCTaGGGCAGGCTCTGTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: AKSEMPKPTLSATAKMVHFLDRL*GRLCGS Trigger: GCTGCCACAGAGCCTGCCCCAGAGTCTGTCCAGGAA...GTGTACCATCTTTGCTGTAGCAGATAATGTGGGTTTAGGCATCTCACTCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR GCA 90 bp | TCTTTTTACATGGACACTGGGAGTTTGAACCCAGATCTTCATGTTTGCAAAGCAGGCTCAGCAGGTGGGTaGCTGCCTCATCACTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SFYMDTGSLNPDLHVCKAGSAGG*LPHHSS Trigger: GCTGGAGTGATGAGGCAGGCACCCACCTGCTGAGCC...TGCTTTGCAAACATGAAGATCTGGGTTCAAACTCCCAGTGTCCATGTAAAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CAA 72 bp | GAAGGTTACAGATGTGCAGTTTCTGTCACAGAGAACTaGGGACCCGGGGTCCAGTTCAGTGTGGATTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: EGYRCAVSVTEN*GPGVQFSVDFG Trigger: ACCAAAATCCACACTGAACTGGACCCCGGGTCCCAAGTTCTCTGTGACAGAAACTGCACATCTGTAACCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR TCA 90 bp | TCTTCCTCTGTCACTCTCAGGGGACTTGACATTTATGCCTGGCTGGGAAGGCTAACTGGTGGCTGGCAGTaGTTTGATTTACCTTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SSSVTLRGLDIYAWLGRLTGGWQ*FDLPCL Trigger: AAGACAAGGTAAATCAAATCACTGCCAGCCACCAGT...TAGCCTTCCCAGCCAGGCATAAATGTCAAGTCCCCTGAGAGTGACAGAGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR TCA 90 bp | ACAGAGAACTTGGGACCCGGGGTCCAGTTCAGTGTGGATTTTGGTTCTTCTATCACGCTCTTATTTATCTaGTGTTCATTCGTCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: TENLGPGVQFSVDFGSSITLLFI*CSFVRG Trigger: GCCCCTGACGAATGAACATCAGATAAATAAGAGCGT...GATAGAAGAACCAAAATCCACACTGAACTGGACCCCGGGTCCCAAGTTCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR GCA 90 bp | TATCCAGTCCAGCAAAGAGTGAGATGCCTAAACCCACATTATCTGCTACAGCAATTGCTAAGAGTGATGTaGAGGAGGTGGGAGCGGTTG | + |
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Preference number: 4 (lower is better) Translates to: YPVQQRVRCLNPHYLLQQLLRVM*RRWERL Trigger: CAACCGCTCCCACCTCCTGCACATCACTCTTAGCAA...TTGCTGTAGCAGATAATGTGGGTTTAGGCATCTCACTCTTTGCTGGACTGGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR TCA 90 bp | ACCAACGGAGAGAGACTCTTGAGGTTCCAGAGTTTTGCTCAAGGGAATAAACAGTGCTTGCAGAATTGCTaGACAGAAACGTTCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TNGERLLRFQSFAQGNKQCLQNC*TETFSS Trigger: GGAGGAGAACGTTTCTGTTCAGCAATTCTGCAAGCA...CTGTTTATTCCCTTGAGCAAAACTCTGGAACCTCAAGAGTCTCTCTCCGTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR CCA 90 bp | TCTTTTTACATGGACACTGGGAGTTTGAACCCAGATCTTCATGTTTGCAAAGCACTGGGGCAGGCTCTGTaGCAGCCACATAAATGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SFYMDTGSLNPDLHVCKALGQAL*QPHKWL Trigger: CAACCATTTATGTGGCTGCCACAGAGCCTGCCCCAG...TGCTTTGCAAACATGAAGATCTGGGTTCAAACTCCCAGTGTCCATGTAAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CAA 72 bp | AGAACTTGGGACCCGGGGTCCAGTTCAGTGTGGATTTaGGTTCTTCTATCCTCCTTCAAAAAGTCCTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: RTWDPGSSSVWI*VLLSSFKKSFH Trigger: GTGAAAGGACTTTTTGAAGGAGGATAGAAGAACCAAAATCCACACTGAACTGGACCCCGGGTCCCAAGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR GCA 90 bp | ACAGCAAAGATGGTACACTGTACCACGGGATCTCTGCTTCATATCTGTGTCAGCAAAGCTTCAGCTGCTTaGAGAATTGCTGAACAGAAA | + |
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Preference number: 4 (lower is better) Translates to: TAKMVHCTTGSLLHICVSKASAA*RIAEQK Trigger: TTTCTGTTCAGCAATTCTGCAAGCAGCTGAAGCTTT...GCTGACACAGATATGAAGCAGAGATCCCGTGGTACAGTGTACCATCTTTGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR GCA 90 bp | ATGGCTTTTATACTTTGTGCTCAGCCATCTGAGATGGAGTCTATGTCTTTGGCTTCTGAGGAGGATTCCTaGTTGCATGCTTGCGATGAT | + |
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Preference number: 4 (lower is better) Translates to: MAFILCAQPSEMESMSLASEEDS*LHACDD Trigger: ATCATCGCAAGCATGCAAGCAGGAATCCTCCTCAGA...AGCCAAAGACATAGACTCCATCTCAGATGGCTGAGCACAAAGTATAAAAGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR CCA 90 bp | GAGGACAGACAACGTGAAGAATATAGGACTTTATATAGACTCTACCTACATCCTCTGGCAGTGTCACACTaGCATAAACTGTGGTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: EDRQREEYRTLYRLYLHPLAVSH*HKLWWG Trigger: ACCCCACCACAGTTTATGCCAGTGTGACACTGCCAG...AGGATGTAGGTAGAGTCTATATAAAGTCCTATATTCTTCACGTTGTCTGTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CAA 72 bp | AAGTATTTGCCAAAGTTGTGCAAGAAGGAAGATAGGTaGAAAGATGGTCTCTCTGAGGACAGACAACGTGAA | + |
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Preference number: 4 (lower is better) Translates to: KYLPKLCKKEDR*KDGLSEDRQRE Trigger: TTCACGTTGTCTGTCCTCAGAGAGACCATCTTTCAACCTATCTTCCTTCTTGCACAACTTTGGCAAATACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CAA 72 bp | CATGGACACTGGGAGTTTGAACCCAGATCTTCATGTTaGCAAAGCAAGTACTATTATCCATTTAGACCTCTC | + |
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Preference number: 4 (lower is better) Translates to: HGHWEFEPRSSC*QSKYYYPFRPL Trigger: GAGAGGTCTAAATGGATAATAGTACTTGCTTTGCAAACATGAAGATCTGGGTTCAAACTCCCAGTGTCCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| 3UTR CAA 72 bp | CAACCACACTTATCTTTTTACATGGACACTGGGAGTTaGAACCCAGATCTTCATGTTTGCAAAGCAAGTACT | + |
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Preference number: 4 (lower is better) Translates to: QPHLSFYMDTGS*NPDLHVCKAST Trigger: AGTACTTGCTTTGCAAACATGAAGATCTGGGTTCAAACTCCCAGTGTCCATGTAAAAAGATAAGTGTGGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS GCA 90 bp | GTGCAGGAGGTGGGAGCGGTTGGCTCGGCTCAGCAGGTGGGTGCCTaGCTCATCACTCCAGCTGTAAGTCACATGGTCCCCTTTCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: VQEVGAVGSAQQVGA*LITPAVSHMVPFLH Trigger: GTGAAGAAAGGGGACCATGTGACTTACAGCTGGAGTGATGAGGCAGGCACCCACCTGCTGAGCCGAGCCAACCGCTCCCACCTCCTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR CAA 90 bp | GGGGAGTATCTTCCTCTGTCACTCTCAGGGGACTTGACATTTATGCCTGGCTGGAGGAGGTGGGAGCGGTaGGCTCGGCTCAGCAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: GEYLPLSLSGDLTFMPGWRRWER*ARLSRW Trigger: CCACCTGCTGAGCCGAGCCAACCGCTCCCACCTCCT...CCAGCCAGGCATAAATGTCAAGTCCCCTGAGAGTGACAGAGGAAGATACTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS CCA 90 bp | CGTCAGGGGCAGCCACGTGTCCTGTCCCAGCTTCTGGAGAATCACTaGGCAATCCATCACACCTCCACCTGTTCCGTAGCTCAACTCAAA | + |
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Preference number: 5 (lower is better) Translates to: RQGQPRVLSQLLENH*AIHHTSTCSVAQLK Trigger: TTTGAGTTGAGCTACGGAACAGGTGGAGGTGTGATGGATTGCCCAGTGATTCTCCAGAAGCTGGGACAGGACACGTGGCTGCCCCTGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS GCA 90 bp | CCTCATCACTCCAGCTGTAAGTCACATGGTCCCCTTTCTTCACTGTaGAGGCCAACAGCAAGCTGCAGGTCCCATTCTCGTTCTCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: PHHSSCKSHGPLSSL*RPTASCRSHSRSPG Trigger: CCCAGGAGAACGAGAATGGGACCTGCAGCTTGCTGTTGGCCTGCACAGTGAAGAAAGGGGACCATGTGACTTACAGCTGGAGTGATGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS CCA 90 bp | GTTCCTGGACAGACTCTGGGGCAGGCTCTGTGGCAGCCACATAAATaGTTGTGCAGGGGTCCTGATCTGTTAGGGCATCATGAAGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: VPGQTLGQALWQPHK*LCRGPDLLGHHEVS Trigger: AGAAACTTCATGATGCCCTAACAGATCAGGACCCCTGCACAACCATTTATGTGGCTGCCACAGAGCCTGCCCCAGAGTCTGTCCAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS GCA 90 bp | GGACAGACTCTGGGGCAGGCTCTGTGGCAGCCACATAAATGGTTGTaGAGGGGTCCTGATCTGTTAGGGCATCATGAAGTTTCTTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: GQTLGQALWQPHKWL*RGPDLLGHHEVSSL Trigger: AAGAGAAGAAACTTCATGATGCCCTAACAGATCAGGACCCCTGCACAACCATTTATGTGGCTGCCACAGAGCCTGCCCCAGAGTCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS TCA 90 bp | ATGGTGACGAGGATGCGGACACTTTTGTTCACGCTCTTATTTATCTaGTGTTCATTCGTCAGGGGCAGCCACGTGTCCTGTCCCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: MVTRMRTLLFTLLFI*CSFVRGSHVSCPSF Trigger: GAAGCTGGGACAGGACACGTGGCTGCCCCTGACGAATGAACATCAGATAAATAAGAGCGTGAACAAAAGTGTCCGCATCCTCGTCACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR CAA 90 bp | TCTTCCTCTGTCACTCTCAGGGGACTTGACATTTATGCCTGGCTGGGAAGGCTACAGCTGCTTGCAGAATaGCTGAACAGAAACGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: SSSVTLRGLDIYAWLGRLQLLAE*LNRNVL Trigger: GAGAACGTTTCTGTTCAGCAATTCTGCAAGCAGCTG...TAGCCTTCCCAGCCAGGCATAAATGTCAAGTCCCCTGAGAGTGACAGAGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR CAA 90 bp | GCCCTTGGCCTTGAGGTGATCAGGATCAGCTTCCAGAATAAAGTCCAGAGAGCCAGGATGCGGACACTTTaGTTCACGCTCTTATTTATC | + |
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Preference number: 5 (lower is better) Translates to: ALGLEVIRISFQNKVQRARMRTL*FTLLFI Trigger: GATAAATAAGAGCGTGAACAAAAGTGTCCGCATCCT...GGCTCTCTGGACTTTATTCTGGAAGCTGATCCTGATCACCTCAAGGCCAAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR CAA 90 bp | GGGGAGTATCTTCCTCTGTCACTCTCAGGGGACTTGACATTTATGCCTGGCTGGTCAGGCTCAGGTTTTTaGATTGAAAGTGGTAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: GEYLPLSLSGDLTFMPGWSGSGF*IESGSH Trigger: ATGGCTACCACTTTCAATCAAAAAACCTGAGCCTGA...CCAGCCAGGCATAAATGTCAAGTCCCCTGAGAGTGACAGAGGAAGATACTCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR CAA 90 bp | ACCAACGGAGAGAGACTCTTGAGGTTCCAGAGTTTTGCTCAAGGGAATAAACAGCAGCCACATAAATGGTaGTGCAGGGGTCCTGATCTG | + |
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Preference number: 5 (lower is better) Translates to: TNGERLLRFQSFAQGNKQQPHKW*CRGPDL Trigger: CAGATCAGGACCCCTGCACAACCATTTATGTGGCTG...CTGTTTATTCCCTTGAGCAAAACTCTGGAACCTCAAGAGTCTCTCTCCGTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR CAA 90 bp | TCTTTTTACATGGACACTGGGAGTTTGAACCCAGATCTTCATGTTTGCAAAGCAAAACTGTGGTGGGGTTaGGTTCCTGGACAGACTCTG | + |
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Preference number: 5 (lower is better) Translates to: SFYMDTGSLNPDLHVCKAKLWWG*VPGQTL Trigger: CAGAGTCTGTCCAGGAACCAAACCCCACCACAGTTT...TGCTTTGCAAACATGAAGATCTGGGTTCAAACTCCCAGTGTCCATGTAAAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR CAA 90 bp | TGCAGATCCGTCACCAGGGAACTGATTGGAGAAGGTTACAGATGTGCAGTTTCTTCGTTCTCCTGGGTTTaGTTTAGCACTTTAATCTCT | + |
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Preference number: 5 (lower is better) Translates to: CRSVTRELIGEGYRCAVSSFSWV*FSTLIS Trigger: AGAGATTAAAGTGCTAAACAAAACCCAGGAGAACGA...AGAAACTGCACATCTGTAACCTTCTCCAATCAGTTCCCTGGTGACGGATCTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR CAA 90 bp | ACCAACGGAGAGAGACTCTTGAGGTTCCAGAGTTTTGCTCAAGGGAATAAACAGTGGTACAAGAGTATATaGCATCCATGGACTCGATTC | + |
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Preference number: 5 (lower is better) Translates to: TNGERLLRFQSFAQGNKQWYKSI*HPWTRF Trigger: GAATCGAGTCCATGGATGCAATATACTCTTGTACCA...CTGTTTATTCCCTTGAGCAAAACTCTGGAACCTCAAGAGTCTCTCTCCGTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS-3UTR CAA 90 bp | TCTTTTTACATGGACACTGGGAGTTTGAACCCAGATCTTCATGTTTGCAAAGCAAAAGACACAATTTTCTaGTTGGATTTGCTTCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: SFYMDTGSLNPDLHVCKAKDTIF*LDLLPG Trigger: CCCAGGAAGCAAATCCAACAAGAAAATTGTGTCTTT...TGCTTTGCAAACATGAAGATCTGGGTTCAAACTCCCAGTGTCCATGTAAAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS GCA 72 bp | GTGGGAGCGGTTGGCTCGGCTCAGCAGGTGGGTGCCTaGCTCATCACTCCAGCTGTAAGTCACATGGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: VGAVGSAQQVGA*LITPAVSHMVP Trigger: GGGGACCATGTGACTTACAGCTGGAGTGATGAGGCAGGCACCCACCTGCTGAGCCGAGCCAACCGCTCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS CCA 72 bp | CAGCCACGTGTCCTGTCCCAGCTTCTGGAGAATCACTaGGCAATCCATCACACCTCCACCTGTTCCGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: QPRVLSQLLENH*AIHHTSTCSVA Trigger: AGCTACGGAACAGGTGGAGGTGTGATGGATTGCCCAGTGATTCTCCAGAAGCTGGGACAGGACACGTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS CAA 90 bp | CCTGGACAGACTCTGGGGCAGGCTCTGTGGCAGCCACATAAATGGTaGTGCAGGGGTCCTGATCTGTTAGGGCATCATGAAGTTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PGQTLGQALWQPHKW*CRGPDLLGHHEVSS Trigger: AGAAGAAACTTCATGATGCCCTAACAGATCAGGACCCCTGCACAACCATTTATGTGGCTGCCACAGAGCCTGCCCCAGAGTCTGTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS GCA 72 bp | GGTCCCCTTTCTTCACTGTGCAGGCCAACAGCAAGCTaGAGGTCCCATTCTCGTTCTCCTGGGTTTTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: GPLSSLCRPTAS*RSHSRSPGFCL Trigger: TAAACAAAACCCAGGAGAACGAGAATGGGACCTGCAGCTTGCTGTTGGCCTGCACAGTGAAGAAAGGGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS CAA 72 bp | CCCGCCTGTTCCCGAGGATCTTCAGGCTCAGGTTTTTaGATTGAAAGTGGTAGCCATCCTCCAGGTGATCTG | + |
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Preference number: 6 (lower is better) Translates to: PACSRGSSGSGF*IESGSHPPGDL Trigger: CAGATCACCTGGAGGATGGCTACCACTTTCAATCAAAAAACCTGAGCCTGAAGATCCTCGGGAACAGGCGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS CAA 90 bp | CTTCACTCTCCCGCCTGTTCCCGAGGATCTTCAGGCTCAGGTTTTTaGATTGAAAGTGGTAGCCATCCTCCAGGTGATCTGGATAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LHSPACSRGSSGSGF*IESGSHPPGDLDSS Trigger: GGAGCTATCCAGATCACCTGGAGGATGGCTACCACTTTCAATCAAAAAACCTGAGCCTGAAGATCCTCGGGAACAGGCGGGAGAGTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS CAA 90 bp | CTCGATTCTGAGGAGGATTCCTGCTTGCATGCTTGCGATGATAGGTaGAAGGTCCTAGAGATACTGCTGACAGGGTTGCTTGCGGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LDSEEDSCLHACDDR*KVLEILLTGLLAVQ Trigger: CTGCACCGCAAGCAACCCTGTCAGCAGTATCTCTAGGACCTTCAACCTATCATCGCAAGCATGCAAGCAGGAATCCTCCTCAGAATCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS GCA 72 bp | CTGGAGGGGAGACCTGTTCATAAAGCTTCAGCTGCTTaGAGAATTGCTGAACAGAAACGTTCTCCTCCACGC | + |
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Preference number: 6 (lower is better) Translates to: LEGRPVHKASAA*RIAEQKRSPPR Trigger: GCGTGGAGGAGAACGTTTCTGTTCAGCAATTCTGCAAGCAGCTGAAGCTTTATGAACAGGTCTCCCCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS GCA 72 bp | GGACTCGATTCTGAGGAGGATTCCTGCTTGCATGCTTaGGATGATAGGTTGAAGGTCCTAGAGATACTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GLDSEEDSCLHA*DDRLKVLEILL Trigger: CAGCAGTATCTCTAGGACCTTCAACCTATCATCGCAAGCATGCAAGCAGGAATCCTCCTCAGAATCGAGTCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS CAA 72 bp | AGCAAGCTGCAGGTCCCATTCTCGTTCTCCTGGGTTTaGTTTAGCACTTTAATCTCTGGAGGGGAGACCTGT | + |
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Preference number: 6 (lower is better) Translates to: SKLQVPFSFSWV*FSTLISGGETC Trigger: ACAGGTCTCCCCTCCAGAGATTAAAGTGCTAAACAAAACCCAGGAGAACGAGAATGGGACCTGCAGCTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS TCA 72 bp | AGGATGCGGACACTTTTGTTCACGCTCTTATTTATCTaGTGTTCATTCGTCAGGGGCAGCCACGTGTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: RMRTLLFTLLFI*CSFVRGSHVSC Trigger: ACAGGACACGTGGCTGCCCCTGACGAATGAACATCAGATAAATAAGAGCGTGAACAAAAGTGTCCGCATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS CCA 72 bp | ATCAAAAGACACAATTTTCTTGTTGGATTTGCTTCCTaGGGACGTCGCCATGGTGACGAGGATGCGGACACT | + |
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Preference number: 6 (lower is better) Translates to: IKRHNFLVGFAS*GRRHGDEDADT Trigger: AGTGTCCGCATCCTCGTCACCATGGCGACGTCCCCAGGAAGCAAATCCAACAAGAAAATTGTGTCTTTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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| CDS CAA 72 bp | GGAGACCTGTTCATAAAGCTTCAGCTGCTTGCAGAATaGCTGAACAGAAACGTTCTCCTCCACGCTCACCAA | + |
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Preference number: 6 (lower is better) Translates to: GDLFIKLQLLAE*LNRNVLLHAHQ Trigger: TTGGTGAGCGTGGAGGAGAACGTTTCTGTTCAGCAATTCTGCAAGCAGCTGAAGCTTTATGAACAGGTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015460.5 |
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