Pregenerated sensors for SLAIN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036087Ensembl transcript IDs: ENSMUST00000143829.5, ENSMUST00000144843.8, ENSMUST00000200785.2
Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCTATGTCTCCCTGCTGCTGGTCCAGCGTCAGCAGTGGCAGACTaGGTCTCTGTTATTAACTCATGCTTTCCTGAGCGGGAAACTTTC | + |
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Preference number: 1 (lower is better) Translates to: ALCLPAAGPASAVAD*VSVINSCFPERETF Trigger: GAAAGTTTCCCGCTCAGGAAAGCATGAGTTAATAACAGAGACCCAGTCTGCCACTGCTGACGCTGGACCAGCAGCAGGGAGACATAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR GCA 90 bp | GGTCCAGCGTCAGCAGTGGCAGACTGGGTCTCTGTTATTAACTCATaGTTTCCTGAGCGGGAAACTTTCCTTCCCTTTCTCTCTGCATTT | + |
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Preference number: 1 (lower is better) Translates to: GPASAVADWVSVINS*FPERETFLPFLSAF Trigger: AAATGCAGAGAGAAAGGGAAGGAAAGTTTCCCGCTCAGGAAAGCATGAGTTAATAACAGAGACCCAGTCTGCCACTGCTGACGCTGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR GCA 90 bp | TTATGGATAACCGTGAGCCCCTCCTTTCCCTCTCATCCCTTCCAATaGAAGGACACAAGGTCTTTCACTCTACACTCTAGTTCCGGCACT | + |
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Preference number: 1 (lower is better) Translates to: LWITVSPSFPSHPFQ*KDTRSFTLHSSSGT Trigger: AGTGCCGGAACTAGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGGCTCACGGTTATCCATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR TCA 90 bp | GCTAAGGAGCCCATGGAGAGTGACTGCATGATTACCAAATACATCTaGTGTCACGTGGCTTTAAAGTGCTGCTTCCTCGTCTCCGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: AKEPMESDCMITKYI*CHVALKCCFLVSVS Trigger: ACTGACGGAGACGAGGAAGCAGCACTTTAAAGCCACGTGACATCAGATGTATTTGGTAATCATGCAGTCACTCTCCATGGGCTCCTTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR TCA 90 bp | CCAGTAGGTATTTGCCCAGATATTGGCCTCTGTCAAATAATAAAATaGACCGTGTTTCTAGTGAACAAGCTAAGGAGCCCATGGAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: PVGICPDIGLCQIIK*TVFLVNKLRSPWRV Trigger: CACTCTCCATGGGCTCCTTAGCTTGTTCACTAGAAACACGGTTCATTTTATTATTTGACAGAGGCCAATATCTGGGCAAATACCTACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR GCA 90 bp | TATTTCTTTTCAACTGTTACACTGAACAGAGACCTGCTTGCTGTGTaGACATGTGACTCTACAGAGACAGCGGCTACTCCTTTGTCATTT | + |
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Preference number: 1 (lower is better) Translates to: YFFSTVTLNRDLLAV*TCDSTETAATPLSF Trigger: AAATGACAAAGGAGTAGCCGCTGTCTCTGTAGAGTCACATGTGCACACAGCAAGCAGGTCTCTGTTCAGTGTAACAGTTGAAAAGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR GCA 90 bp | GTAATTCAGTTTAAAGTGGATCGACTCCCACATAATAGAGCATTCTaGCGATCACGAGCAACAATACAACTGTCATCACCAGAGATTTTA | + |
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Preference number: 1 (lower is better) Translates to: VIQFKVDRLPHNRAF*RSRATIQLSSPEIL Trigger: TAAAATCTCTGGTGATGACAGTTGTATTGTTGCTCGTGATCGGCAGAATGCTCTATTATGTGGGAGTCGATCCACTTTAAACTGAATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR GCA 90 bp | ATAGAAATGTTTGCAAATCAAACTTCATGTGATCTAAAAGGACCATaGATCATACTGTCAAAACCGGACACCTGTACAGTGAGTTACGTC | + |
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Preference number: 1 (lower is better) Translates to: IEMFANQTSCDLKGP*IILSKPDTCTVSYV Trigger: GACGTAACTCACTGTACAGGTGTCCGGTTTTGACAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR CCA 90 bp | AATGGGCATTTCTCTTTGGCATCCAGTAGGTATTTGCCCAGATATTaGCCTCTGTCAAATAATAAAATGAACCGTGTTTCTAGTGAACAA | + |
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Preference number: 1 (lower is better) Translates to: NGHFSLASSRYLPRY*PLSNNKMNRVSSEQ Trigger: TTGTTCACTAGAAACACGGTTCATTTTATTATTTGACAGAGGCCAATATCTGGGCAAATACCTACTGGATGCCAAAGAGAAATGCCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR TCA 90 bp | TATTACAAGTTCAGCTATAGAAATGTTTGCAAATCAAACTTCATGTaGTCTAAAAGGACCATGCATCATACTGTCAAAACCGGACACCTG | + |
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Preference number: 1 (lower is better) Translates to: YYKFSYRNVCKSNFM*SKRTMHHTVKTGHL Trigger: CAGGTGTCCGGTTTTGACAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTCTATAGCTGAACTTGTAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGTGGGCGTGCCCTGTGACACCAGTTGGACATGGCTACGTGTGAGCTATGTTGGAGCCCATGGAGAGTaGCTGCATGATTACCAAATA | + |
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Preference number: 2 (lower is better) Translates to: GVGVPCDTSWTWLRVSYVGAHGE*LHDYQI Trigger: TATTTGGTAATCATGCAGTCACTCTCCATGGGCTCC...AACATAGCTCACACGTAGCCATGTCCAACTGGTGTCACAGGGCACGCCCACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCCTTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTGTCCAGCGTCAGCAGTaGCAGACTGGGTCTCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: PLLSLSSLPMQGHKVFHSVQRQQ*QTGSLL Trigger: TAACAGAGACCCAGTCTGCCACTGCTGACGCTGGAC...AGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTAGTTCCGGCACTGGCGTGGCTTTAAAGTGCTaGTTCCTCGTCTCCGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: FQCKDTRSFTLHSSSGTGVALKC*FLVSVS Trigger: ACTGACGGAGACGAGGAAGCAGCACTTTAAAGCCAC...GCCAGTGCCGGAACTAGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCTTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTCCAGGTTGTAAGTGCTaGGGTGTTATTTTGTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: PLLSLSSLPMQGHKVFHSPGCKC*GVILSR Trigger: TCTTGACAAAATAACACCTCAGCACTTACAACCTGG...AGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCTTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTATCCCCACCTTTATGTaGCCCAACTGCCAATATTTA | + |
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Preference number: 2 (lower is better) Translates to: PLLSLSSLPMQGHKVFHSIPTFM*PNCQYL Trigger: TAAATATTGGCAGTTGGGTCACATAAAGGTGGGGAT...AGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCTCCTTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTCCCATGGAGAGTGACTaGATGATTACCAAATACATC | + |
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Preference number: 2 (lower is better) Translates to: PLLSLSSLPMQGHKVFHSPMESD*MITKYI Trigger: GATGTATTTGGTAATCATGCAGTCACTCTCCATGGG...AGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTGGAGCCCATGGAGAGTaGCTGCATGATTACCAAATA | + |
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Preference number: 2 (lower is better) Translates to: FPSHPFQCKDTRSFTLHSGAHGE*LHDYQI Trigger: TATTTGGTAATCATGCAGTCACTCTCCATGGGCTCC...AGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAATCAAAAACAAGTACACACAAGTCTGTGATGTTGATGCAAGGTGTGGGTTAAGACAGAGAGGCTaGGAGTTTGCAAACCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: LAIKNKYTQVCDVDARCGLRQRG*EFANPK Trigger: CTTGGGGTTTGCAAACTCCCAGCCTCTCTGTCTTAA...CCCACACCTTGCATCAACATCACAGACTTGTGTGTACTTGTTTTTGATTGCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCCTTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTCATATCATAGAAACCTaGGAATGGAAACGAGATCTT | + |
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Preference number: 2 (lower is better) Translates to: PLLSLSSLPMQGHKVFHSHIIET*EWKRDL Trigger: AAGATCTCGTTTCCATTCCCAGGTTTCTATGATATG...AGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR CCA 90 bp | GAAATGTTTGCAAATCAAACTTCATGTGATCTAAAAGGACCATGCATCATACTGATGTCTCCCTGCTGCTaGTCCAGCGTCAGCAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: EMFANQTSCDLKGPCIILMSPCC*SSVSSG Trigger: GCCACTGCTGACGCTGGACCAGCAGCAGGGAGACAT...CAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR CAA 90 bp | CAAGAGTCTCATCTGAAGAGTCTGCATATAAAAGTTGGTTTCAGTTaGGTGACGGTGTCCATGAAGCTGTGGACATCTGTGTCCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: QESHLKSLHIKVGFS*VTVSMKLWTSVSSS Trigger: AGATGAGGACACAGATGTCCACAGCTTCATGGACACCGTCACCAAACTGAAACCAACTTTTATATGCAGACTCTTCAGATGAGACTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTAGTTCCGGCACTGGCATTACCAAATACATCTaGTGTCACGTGGCTTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: FQCKDTRSFTLHSSSGTGITKYI*CHVALK Trigger: CTTTAAAGCCACGTGACATCAGATGTATTTGGTAAT...GCCAGTGCCGGAACTAGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTATCCTGAAGGAGTGGCTTTAAAGTGCTaGTTCCTCGTCTCCGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: SGPSFLSPNLYNLLYPEGVALKC*FLVSVS Trigger: ACTGACGGAGACGAGGAAGCAGCACTTTAAAGCCAC...TCCTTCAGGATACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR GCA 90 bp | GATCTAAAAGGACCATGCATCATACTGTCAAAACCGGACACCTGTACAGTGAGTCATCCAGTAGGTATTTaGCCAGATATTGGCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: DLKGPCIILSKPDTCTVSHPVGI*PDIGLC Trigger: ACAGAGGCCAATATCTGGGCAAATACCTACTGGATG...ACTCACTGTACAGGTGTCCGGTTTTGACAGTATGATGCATGGTCCTTTTAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR TCA 90 bp | GTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACAAACATCTGGGGACAGAAACAGCATGTaGGTAAGGTGGCTTCAACAG | + |
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Preference number: 2 (lower is better) Translates to: VNLNIHSLDHPRGIQTSGDRNSM*VRWLQQ Trigger: CTGTTGAAGCCACCTTACTCACATGCTGTTTCTGTC...CCCAGATGTTTGTATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATATTTCCCCTCCTCCTGTaGCATGGTTTTATTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: TVSYVNLNIHSLDHPRGIFPLLL*HGFIPG Trigger: ACCTGGAATAAAACCATGTCACAGGAGGAGGGGAAA...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR TCA 90 bp | GTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACAAACATCTGGGTTTCAACTGTTACACTaGACAGAGACCTGCTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VNLNIHSLDHPRGIQTSGFQLLH*TETCLL Trigger: CAGCAAGCAGGTCTCTGTTCAGTGTAACAGTTGAAA...CCCAGATGTTTGTATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR GCA 90 bp | TTATTTCTTTTCAACTGTTACACTGAACAGAGACCTGCTTGCTGTGTGCACATGCCCATGGAGAGTGACTaGATGATTACCAAATACATC | + |
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Preference number: 2 (lower is better) Translates to: LFLFNCYTEQRPACCVHMPMESD*MITKYI Trigger: GATGTATTTGGTAATCATGCAGTCACTCTCCATGGG...CATGTGCACACAGCAAGCAGGTCTCTGTTCAGTGTAACAGTTGAAAAGAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACAAACATCTGGGTCAGCAGTGGCAGACTaGGTCTCTGTTATTAACTCA | + |
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Preference number: 2 (lower is better) Translates to: VNLNIHSLDHPRGIQTSGSAVAD*VSVINS Trigger: TGAGTTAATAACAGAGACCCAGTCTGCCACTGCTGA...CCCAGATGTTTGTATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR TCA 90 bp | GAAATGTTTGCAAATCAAACTTCATGTGATCTAAAAGGACCATGCATCATACTGTTTCCCCTCCTCCTGTaGCATGGTTTTATTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: EMFANQTSCDLKGPCIILFPLLL*HGFIPG Trigger: ACCTGGAATAAAACCATGTCACAGGAGGAGGGGAAA...CAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR CCA 90 bp | GAAATGTTTGCAAATCAAACTTCATGTGATCTAAAAGGACCATGCATCATACTGTTAAGACAGAGAGGCTaGGAGTTTGCAAACCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: EMFANQTSCDLKGPCIILLRQRG*EFANPK Trigger: CTTGGGGTTTGCAAACTCCCAGCCTCTCTGTCTTAA...CAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR CAA 90 bp | ACTCTCTTTACAAATGGGCATTTCTCTTTGGCATCCAGTAGGTATTaGCCCAGATATTGGCCTCTGTCAAATAATAAAATGAACCGTGTT | + |
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Preference number: 2 (lower is better) Translates to: TLFTNGHFSLASSRY*PRYWPLSNNKMNRV Trigger: AACACGGTTCATTTTATTATTTGACAGAGGCCAATATCTGGGCAAATACCTACTGGATGCCAAAGAGAAATGCCCATTTGTAAAGAGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR TCA 90 bp | GTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACAAACATCTGGGGATCTTTTAGTTGTGTaGCAGAAACAGCATGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: VNLNIHSLDHPRGIQTSGDLLVV*QKQHVS Trigger: ACTCACATGCTGTTTCTGTCACACAACTAAAAGATC...CCCAGATGTTTGTATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACCAGGGTATGAAAACTaGGAAAAGTCAACTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: TVSYVNLNIHSLDHPRGIPGYEN*EKSTLQ Trigger: CTGAAGAGTTGACTTTTCTCAGTTTTCATACCCTGG...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR TCA 90 bp | ATTATGGTCAGGCTGTTTATTAAGGAGGCAACCACATATTACAAGTTCAGCTATCCAGGGTATGAAAACTaGGAAAAGTCAACTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: IMVRLFIKEATTYYKFSYPGYEN*EKSTLQ Trigger: CTGAAGAGTTGACTTTTCTCAGTTTTCATACCCTGG...ATAGCTGAACTTGTAATATGTGGTTGCCTCCTTAATAAACAGCCTGACCATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144843.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAGTTCAAATCCCCACCTTTATGTGACCCAACTGCCAATATTTAAAACTGTCGATTTTATAGTTCAGTaGATAGATTTCCCCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: MSSNPHLYVTQLPIFKTVDFIVQ*IDFPSS Trigger: GGAGGAGGGGAAATCTATGCACTGAACTATAAAATC...GACAGTTTTAAATATTGGCAGTTGGGTCACATAAAGGTGGGGATTTGAACTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTATCCTGAAGGATCTGCATATAAAAGTTaGTTTCAGTTTGGTGACGGT | + |
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Preference number: 2 (lower is better) Translates to: SGPSFLSPNLYNLLYPEGSAYKS*FQFGDG Trigger: ACCGTCACCAAACTGAAACCAACTTTTATATGCAGA...TCCTTCAGGATACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATAGATCTTTTAGTTGTGTaGCAGAAACAGCATGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: TVSYVNLNIHSLDHPRGIDLLVV*QKQHVS Trigger: ACTCACATGCTGTTTCTGTCACACAACTAAAAGATC...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR TCA 90 bp | GAAATGTTTGCAAATCAAACTTCATGTGATCTAAAAGGACCATGCATCATACTGGGTCATAGCTTCTGCTaGCATACAAGTGACAATTCT | + |
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Preference number: 2 (lower is better) Translates to: EMFANQTSCDLKGPCIILGHSFC*HTSDNS Trigger: AGAATTGTCACTTGTATGTCAGCAGAAGCTATGACC...CAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATAATTACCAAATACATCTaGTGTCACGTGGCTTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: TVSYVNLNIHSLDHPRGIITKYI*CHVALK Trigger: CTTTAAAGCCACGTGACATCAGATGTATTTGGTAAT...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR-3UTR TCA 90 bp | GAAATGTTTGCAAATCAAACTTCATGTGATCTAAAAGGACCATGCATCATACTGTCTACTTACAGGAAATaGGTTCAAATCCCCACCTTT | + |
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Preference number: 2 (lower is better) Translates to: EMFANQTSCDLKGPCIILSTYRK*VQIPTF Trigger: AAAGGTGGGGATTTGAACTCATTTCCTGTAAGTAGA...CAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR GCA 72 bp | GCGCTGTTTGTGCTAGCGAGCTCTATGTCTCCCTGCTaGTGGTCCAGCGTCAGCAGTGGCAGACTGGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: ALFVLASSMSPC*WSSVSSGRLGL Trigger: GAGACCCAGTCTGCCACTGCTGACGCTGGACCAGCAGCAGGGAGACATAGAGCTCGCTAGCACAAACAGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR CCA 72 bp | CTGTTTGTGCTAGCGAGCTCTATGTCTCCCTGCTGCTaGTCCAGCGTCAGCAGTGGCAGACTGGGTCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: LFVLASSMSPCC*SSVSSGRLGLC Trigger: ACAGAGACCCAGTCTGCCACTGCTGACGCTGGACCAGCAGCAGGGAGACATAGAGCTCGCTAGCACAAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| 3UTR CCA 72 bp | CTCCCTGCTGCTGGTCCAGCGTCAGCAGTGGCAGACTaGGTCTCTGTTATTAACTCATGCTTTCCTGAGCGG | + |
|
Preference number: 3 (lower is better) Translates to: LPAAGPASAVAD*VSVINSCFPER Trigger: CCGCTCAGGAAAGCATGAGTTAATAACAGAGACCCAGTCTGCCACTGCTGACGCTGGACCAGCAGCAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| 3UTR CCA 72 bp | CTCTATGTCTCCCTGCTGCTGGTCCAGCGTCAGCAGTaGCAGACTGGGTCTCTGTTATTAACTCATGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LYVSLLLVQRQQ*QTGSLLLTHAF Trigger: GAAAGCATGAGTTAATAACAGAGACCCAGTCTGCCACTGCTGACGCTGGACCAGCAGCAGGGAGACATAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| 3UTR GCA 72 bp | TCAACTGTTACACTGAACAGAGACCTGCTTGCTGTGTaGACATGTGACTCTACAGAGACAGCGGCTACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: STVTLNRDLLAV*TCDSTETAATP Trigger: AGGAGTAGCCGCTGTCTCTGTAGAGTCACATGTGCACACAGCAAGCAGGTCTCTGTTCAGTGTAACAGTTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCTAAAAGGACCATGCATCATACTGTCAAAACCGGACACCTGTACAGTGAGTAGAGAGGCTGGGAGTTaGCAAACCCCAAGAGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: DLKGPCIILSKPDTCTVSREAGS*QTPRVS Trigger: TGAGACTCTTGGGGTTTGCAAACTCCCAGCCTCTCT...ACTCACTGTACAGGTGTCCGGTTTTGACAGTATGATGCATGGTCCTTTTAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTAGTTCCGGCACTGGCGTAGAGTCGGATGACTaGTTACAAACCATGAAAACG | + |
|
Preference number: 3 (lower is better) Translates to: FQCKDTRSFTLHSSSGTGVESDD*LQTMKT Trigger: CGTTTTCATGGTTTGTAACAAGTCATCCGACTCTAC...GCCAGTGCCGGAACTAGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| 3UTR TCA 72 bp | CCCATGGAGAGTGACTGCATGATTACCAAATACATCTaGTGTCACGTGGCTTTAAAGTGCTGCTTCCTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: PMESDCMITKYI*CHVALKCCFLV Trigger: GACGAGGAAGCAGCACTTTAAAGCCACGTGACATCAGATGTATTTGGTAATCATGCAGTCACTCTCCATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACAAACATCTGGGAGAGAGGCTGGGAGTTaGCAAACCCCAAGAGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VNLNIHSLDHPRGIQTSGREAGS*QTPRVS Trigger: TGAGACTCTTGGGGTTTGCAAACTCCCAGCCTCTCT...CCCAGATGTTTGTATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACAAACATCTGGGGCATCCAGTAGGTATTaGCCCAGATATTGGCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VNLNIHSLDHPRGIQTSGASSRY*PRYWPL Trigger: CAGAGGCCAATATCTGGGCAAATACCTACTGGATGC...CCCAGATGTTTGTATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCTAAAAGGACCATGCATCATACTGTCAAAACCGGACACCTGTACAGTGAGTGTAGAGTCGGATGACTaGTTACAAACCATGAAAACG | + |
|
Preference number: 3 (lower is better) Translates to: DLKGPCIILSKPDTCTVSVESDD*LQTMKT Trigger: CGTTTTCATGGTTTGTAACAAGTCATCCGACTCTAC...ACTCACTGTACAGGTGTCCGGTTTTGACAGTATGATGCATGGTCCTTTTAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| 3UTR GCA 72 bp | TTTAAAGTGGATCGACTCCCACATAATAGAGCATTCTaGCGATCACGAGCAACAATACAACTGTCATCACCA | + |
|
Preference number: 3 (lower is better) Translates to: FKVDRLPHNRAF*RSRATIQLSSP Trigger: TGGTGATGACAGTTGTATTGTTGCTCGTGATCGGCAGAATGCTCTATTATGTGGGAGTCGATCCACTTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCAAGAACAAAGACACATCATATCATAGAAACCTGGGAATGGAAACGAGATGCATCCAGTAGGTATTaGCCCAGATATTGGCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSRTKTHHIIETWEWKRDASSRY*PRYWPL Trigger: CAGAGGCCAATATCTGGGCAAATACCTACTGGATGC...ATCTCGTTTCCATTCCCAGGTTTCTATGATATGATGTGTCTTTGTTCTTGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATTTCTTTTCAACTGTTACACTGAACAGAGACCTGCTTGCTGTGTGCACATGTCTCTGCATTTCTACTaGCACCTTACAGAACACCTC | + |
|
Preference number: 3 (lower is better) Translates to: LFLFNCYTEQRPACCVHMSLHFY*HLTEHL Trigger: GAGGTGTTCTGTAAGGTGCAAGTAGAAATGCAGAGA...CATGTGCACACAGCAAGCAGGTCTCTGTTCAGTGTAACAGTTGAAAAGAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATTTCTTTTCAACTGTTACACTGAACAGAGACCTGCTTGCTGTGTGCACATGAATGGGCATTTCTCTTaGGCATCCAGTAGGTATTTG | + |
|
Preference number: 3 (lower is better) Translates to: LFLFNCYTEQRPACCVHMNGHFS*ASSRYL Trigger: CAAATACCTACTGGATGCCAAAGAGAAATGCCCATT...CATGTGCACACAGCAAGCAGGTCTCTGTTCAGTGTAACAGTTGAAAAGAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTATGGTCAGGCTGTTTATTAAGGAGGCAACCACATATTACAAGTTCAGCTATACAGCGGCTACTCCTTaGTCATTTATGAGACACACC | + |
|
Preference number: 3 (lower is better) Translates to: IMVRLFIKEATTYYKFSYTAATP*SFMRHT Trigger: GGTGTGTCTCATAAATGACAAAGGAGTAGCCGCTGT...ATAGCTGAACTTGTAATATGTGGTTGCCTCCTTAATAAACAGCCTGACCATAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144843.8 |
||
| 3UTR GCA 72 bp | TTTGCAAATCAAACTTCATGTGATCTAAAAGGACCATaGATCATACTGTCAAAACCGGACACCTGTACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: FANQTSCDLKGP*IILSKPDTCTV Trigger: CACTGTACAGGTGTCCGGTTTTGACAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTAGTTCCGGCACTGGCGGGCCCGAGGAGGCCTaGACCCTGCACGGCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FQCKDTRSFTLHSSSGTGGPEEA*TLHGSR Trigger: TCGGGAGCCGTGCAGGGTGCAGGCCTCCTCGGGCCC...GCCAGTGCCGGAACTAGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTGGGCGTGCCCTGTGACACCAGTTGGACATGGCTACGTGTGAGCTATGTTGCTGTACAAGCTTGCTaGGAGGCACTGGGATGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GVGVPCDTSWTWLRVSYVAVQAC*EALGCP Trigger: GGGGCATCCCAGTGCCTCGCAGCAAGCTTGTACAGC...AACATAGCTCACACGTAGCCATGTCCAACTGGTGTCACAGGGCACGCCCACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTGGGCGTGCCCTGTGACACCAGTTGGACATGGCTACGTGTGAGCTATGTTCAGGCTGTACAAGCTTaGTGCGAGGCACTGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GVGVPCDTSWTWLRVSYVQAVQA*CEALGC Trigger: GCATCCCAGTGCCTCGCAGCAAGCTTGTACAGCCTG...AACATAGCTCACACGTAGCCATGTCCAACTGGTGTCACAGGGCACGCCCACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTTGCGAGGCACTGGGATaGCCCCCGCAGAAGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FPSHPFQCKDTRSFTLHSCEALG*PPQKGR Trigger: GCGCCCCTTCTGCGGGGGGCATCCCAGTGCCTCGCA...AGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTGGGCGTGCCCTGTGACACCAGTTGGACATGGCTACGTGTGAGCTATGTTGAAGTGGCTGAAGCCTaGGGCTGCATTCGAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: GVGVPCDTSWTWLRVSYVEVAEA*GCIRGI Trigger: AATACCTCGAATGCAGCCTCAGGCTTCAGCCACTTC...AACATAGCTCACACGTAGCCATGTCCAACTGGTGTCACAGGGCACGCCCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143829.5 |
||
| CDS-3UTR GCA 90 bp | CTGGCAATCAAAAACAAGTACACACAAGTCTGTGATGTTGATGCAAGGTGTGGGAGGAGGCCTGCACCCTaGACGGCTCCCGAGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LAIKNKYTQVCDVDARCGRRPAP*TAPERL Trigger: GAGCCGCTCGGGAGCCGTGCAGGGTGCAGGCCTCCT...CCCACACCTTGCATCAACATCACAGACTTGTGTGTACTTGTTTTTGATTGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTGGGCGTGCCCTGTGACACCAGTTGGACATGGCTACGTGTGAGCTATGTTCTATCTATAGAGGACTaGGGGCTGAGTGGAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GVGVPCDTSWTWLRVSYVLSIED*GLSGGF Trigger: AAACCCTCCACTCAGCCCTCAGTCCTCTATAGATAG...AACATAGCTCACACGTAGCCATGTCCAACTGGTGTCACAGGGCACGCCCACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTCCTTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTAAGATGAACCAGAGCTaGGGCGAGAGGTGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLSLSSLPMQGHKVFHSKMNQS*GERCWL Trigger: CAGCCAGCACCTCTCGCCGCAGCTCTGGTTCATCTT...AGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGGGCGTGCCCTGTGACACCAGTTGGACATGGCTACGTGTGAGCTATGTTGAAGCCACTGCTGTATaGGCTACTGGCATTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GVGVPCDTSWTWLRVSYVEATAV*ATGIWT Trigger: AGTCCAAATGCCAGTAGCCCATACAGCAGTGGCTTC...AACATAGCTCACACGTAGCCATGTCCAACTGGTGTCACAGGGCACGCCCACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCTTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTAGGTCGCACTGGTGTTaGGGATGGAGAGTTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLSLSSLPMQGHKVFHSRSHWC*GWRVEA Trigger: GGCTTCAACTCTCCATCCTCAACACCAGTGCGACCT...AGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTAGTTCCGGCACTGGCCACAGGAGGCCCAGGTaGGGAGGTGGTTTGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FQCKDTRSFTLHSSSGTGHRRPR*GGGLCE Trigger: TTCACACAAACCACCTCCTCACCTGGGCCTCCTGTG...GCCAGTGCCGGAACTAGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTCCTTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTGAAAGGCGAGGCTGCTaGAAGCGGCTAATCATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLLSLSSLPMQGHKVFHSERRGC*KRLIIG Trigger: GCCTATGATTAGCCGCTTGCAGCAGCCTCGCCTTTC...AGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTGCTGGGGCTGAGTTCTaGACCACAGGAGGCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPSHPFQCKDTRSFTLHSAGAEF*TTGGPG Trigger: ACCTGGGCCTCCTGTGGTGCAGAACTCAGCCCCAGC...AGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGGGCGTGCCCTGTGACACCAGTTGGACATGGCTACGTGTGAGCTATGTTTCGTCTGTAAATCTGTaGGATGGCCTTGGAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVGVPCDTSWTWLRVSYVSSVNL*DGLGGK Trigger: TTTCCCTCCAAGGCCATCCCACAGATTTACAGACGA...AACATAGCTCACACGTAGCCATGTCCAACTGGTGTCACAGGGCACGCCCACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | GATCTAAAAGGACCATGCATCATACTGTCAAAACCGGACACCTGTACAGTGAGTTTCCTCCTCCCAGCCTaGCAAGCGCTCCAGCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: DLKGPCIILSKPDTCTVSFLLPA*QALQLV Trigger: GACGAGCTGGAGCGCTTGTCAGGCTGGGAGGAGGAA...ACTCACTGTACAGGTGTCCGGTTTTGACAGTATGATGCATGGTCCTTTTAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTAGGGTTTGCTGGGGCTaGGTTCTGCACCACAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPSHPFQCKDTRSFTLHSRVCWG*VLHHRR Trigger: CCTCCTGTGGTGCAGAACTCAGCCCCAGCAAACCCT...AGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCTTTAGCTCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTAGGAGGCCTGCACCCTaGACGGCTCCCGAGCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSLAQALLSSLPIFIIYCRRPAP*TAPERL Trigger: GAGCCGCTCGGGAGCCGTGCAGGGTGCAGGCCTCCT...ACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGAGCTAAAGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTCCTTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTAAGGGCAGGGTGTACTaGATGCTGCAGACTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PLLSLSSLPMQGHKVFHSKGRVY*MLQTVI Trigger: GATGACAGTCTGCAGCATGCAGTACACCCTGCCCTT...AGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGTTCAAATCCCCACCTTTATGTGACCCAACTGCCAATATTTAAAACTGTCTGCGAGGCACTGGGATaGCCCCCGCAGAAGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: MSSNPHLYVTQLPIFKTVCEALG*PPQKGR Trigger: GCGCCCCTTCTGCGGGGGGCATCCCAGTGCCTCGCA...GACAGTTTTAAATATTGGCAGTTGGGTCACATAAAGGTGGGGATTTGAACTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTGCTGTACAAGCTTGCTaGGAGGCACTGGGATGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPSHPFQCKDTRSFTLHSAVQAC*EALGCP Trigger: GGGGCATCCCAGTGCCTCGCAGCAAGCTTGTACAGC...AGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGGGCGTGCCCTGTGACACCAGTTGGACATGGCTACGTGTGAGCTATGTTCCAGAACCAGAGCCATaGTTACTAAACGCTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GVGVPCDTSWTWLRVSYVPEPEP*LLNAFT Trigger: AGTGAAAGCGTTTAGTAACCATGGCTCTGGTTCTGG...AACATAGCTCACACGTAGCCATGTCCAACTGGTGTCACAGGGCACGCCCACACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGGGCGTGCCCTGTGACACCAGTTGGACATGGCTACGTGTGAGCTATGTTGTGGTTTGTGTGAACTaGGTAGTTTCTTGGCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: GVGVPCDTSWTWLRVSYVVVCVN*VVSWLP Trigger: TGGTAGCCAAGAAACTACCCAGTTCACACAAACCAC...AACATAGCTCACACGTAGCCATGTCCAACTGGTGTCACAGGGCACGCCCACACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTAGTTCCGGCACTGGCTTGAGGATGGAGAGTTaGAGCCACTGCTGTATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQCKDTRSFTLHSSSGTGLRMES*SHCCMG Trigger: GCCCATACAGCAGTGGCTTCAACTCTCCATCCTCAA...GCCAGTGCCGGAACTAGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | GAAATGTTTGCAAATCAAACTTCATGTGATCTAAAAGGACCATGCATCATACTGGGGCCCGAGGAGGCCTaGACCCTGCACGGCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: EMFANQTSCDLKGPCIILGPEEA*TLHGSR Trigger: TCGGGAGCCGTGCAGGGTGCAGGCCTCCTCGGGCCC...CAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTAGTTCCGGCACTGGCGAATTTCGAGGCGACTaGTTAGGAGATGGTCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FQCKDTRSFTLHSSSGTGEFRGD*LGDGRG Trigger: ACCACGACCATCTCCTAAGCAGTCGCCTCGAAATTC...GCCAGTGCCGGAACTAGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | GATCTAAAAGGACCATGCATCATACTGTCAAAACCGGACACCTGTACAGTGAGTTGCGGCGAGAGGTGCTaGCTGCATATTCTTGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLKGPCIILSKPDTCTVSCGERC*LHILAG Trigger: TCCGGCAAGAATATGCAGCCAGCACCTCTCGCCGCA...ACTCACTGTACAGGTGTCCGGTTTTGACAGTATGATGCATGGTCCTTTTAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTCCTTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTGCTAATCATAGGCTGTaGGGACGCTCTACTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: PLLSLSSLPMQGHKVFHSANHRL*GRSTVF Trigger: GAATACAGTAGAGCGTCCCCACAGCCTATGATTAGC...AGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCAATCAAAAACAAGTACACACAAGTCTGTGATGTTGATGCAAGGTGTGGGTTGCCGAAGAGCCAATaGAGACGGTGCTGCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LAIKNKYTQVCDVDARCGLPKSQ*RRCCRG Trigger: TCCCCTGCAGCACCGTCTCCATTGGCTCTTCGGCAA...CCCACACCTTGCATCAACATCACAGACTTGTGTGTACTTGTTTTTGATTGCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTTTGAGGATGGAGAGTTaGAGCCACTGCTGTATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPSHPFQCKDTRSFTLHSLRMES*SHCCMG Trigger: GCCCATACAGCAGTGGCTTCAACTCTCCATCCTCAA...AGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTCGTAGAATTGCAAGATaGACCAGAGCTGCGGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FPSHPFQCKDTRSFTLHSRRIAR*TRAAAR Trigger: TCTCGCCGCAGCTCTGGTTCATCTTGCAATTCTACG...AGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | GATCTAAAAGGACCATGCATCATACTGTCAAAACCGGACACCTGTACAGTGAGTCAGGGGAGCGGAATTTaGCTGGAGAAGGTATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DLKGPCIILSKPDTCTVSQGSGI*LEKVWL Trigger: CAGCCATACCTTCTCCAGGCAAATTCCGCTCCCCTG...ACTCACTGTACAGGTGTCCGGTTTTGACAGTATGATGCATGGTCCTTTTAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCTTTAGCTCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTGCTGGGGCTGAGTTCTaGACCACAGGAGGCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSLAQALLSSLPIFIIYCAGAEF*TTGGPG Trigger: ACCTGGGCCTCCTGTGGTGCAGAACTCAGCCCCAGC...ACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGAGCTAAAGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTCCTTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTCTCCACATCAGGACTTaGGTAATCCAAAACTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLLSLSSLPMQGHKVFHSLHIRT*VIQNLP Trigger: AGGCAAGTTTTGGATTACCCAAGTCCTGATGTGGAG...AGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTAGTTCCGGCACTGGCGCTAATCATAGGCTGTaGGGACGCTCTACTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: FQCKDTRSFTLHSSSGTGANHRL*GRSTVF Trigger: GAATACAGTAGAGCGTCCCCACAGCCTATGATTAGC...GCCAGTGCCGGAACTAGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATATTCCTCCTCCCAGCCTaGCAAGCGCTCCAGCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TVSYVNLNIHSLDHPRGIFLLPA*QALQLV Trigger: GACGAGCTGGAGCGCTTGTCAGGCTGGGAGGAGGAA...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCAATCAAAAACAAGTACACACAAGTCTGTGATGTTGATGCAAGGTGTGGGAAGGGCAGGGTGTACTaGATGCTGCAGACTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LAIKNKYTQVCDVDARCGKGRVY*MLQTVI Trigger: GATGACAGTCTGCAGCATGCAGTACACCCTGCCCTT...CCCACACCTTGCATCAACATCACAGACTTGTGTGTACTTGTTTTTGATTGCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | GTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACAAACATCTGGGTCTGTGGGATGGCCTTaGAGGGAAAGGCGAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VNLNIHSLDHPRGIQTSGSVGWP*RERRGC Trigger: GCAGCCTCGCCTTTCCCTCCAAGGCCATCCCACAGA...CCCAGATGTTTGTATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTATCCTGAAGGATTGCCGAAGAGCCAATaGAGACGGTGCTGCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGPSFLSPNLYNLLYPEGLPKSQ*RRCCRG Trigger: TCCCCTGCAGCACCGTCTCCATTGGCTCTTCGGCAA...TCCTTCAGGATACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTAGTTCCGGCACTGGCACCAAACTAATGGACTaGCAGATTTCTGCATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FQCKDTRSFTLHSSSGTGTKLMD*QISALV Trigger: CACCAATGCAGAAATCTGTCAGTCCATTAGTTTGGT...GCCAGTGCCGGAACTAGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATAAGGGTTTGCTGGGGCTaGGTTCTGCACCACAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVSYVNLNIHSLDHPRGIRVCWG*VLHHRR Trigger: CCTCCTGTGGTGCAGAACTCAGCCCCAGCAAACCCT...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTCTTTTCAACTGTTACACTGAACAGAGACCTGCTTGCTGTGTGCACATGCCTTTGAGAAGTGGCTaGAGCCTGAGGCTGCATTCG | + |
|
Preference number: 4 (lower is better) Translates to: LFLFNCYTEQRPACCVHMPLRSG*SLRLHS Trigger: CGAATGCAGCCTCAGGCTTCAGCCACTTCTCAAAGG...CATGTGCACACAGCAAGCAGGTCTCTGTTCAGTGTAACAGTTGAAAAGAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143829.5 |
||
| CDS-3UTR GCA 90 bp | GATCTAAAAGGACCATGCATCATACTGTCAAAACCGGACACCTGTACAGTGAGTCTGGCTGCATATTCTTaGCGGAGACTTTCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DLKGPCIILSKPDTCTVSLAAYS*RRLSSC Trigger: GCAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCAG...ACTCACTGTACAGGTGTCCGGTTTTGACAGTATGATGCATGGTCCTTTTAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCTTTAGCTCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTAGCTGCGGCGAGAGGTaGTGGCTGCATATTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSLAQALLSSLPIFIIYCSCGER*WLHILA Trigger: GGCAAGAATATGCAGCCAGCACCTCTCGCCGCAGCT...ACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGAGCTAAAGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCAATCAAAAACAAGTACACACAAGTCTGTGATGTTGATGCAAGGTGTGGGAACGCTTTCACTGGTTaGCGAAGAGCCAATGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LAIKNKYTQVCDVDARCGNAFTG*RRANGD Trigger: GTCTCCATTGGCTCTTCGGCAACCAGTGAAAGCGTT...CCCACACCTTGCATCAACATCACAGACTTGTGTGTACTTGTTTTTGATTGCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTCCTTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTTGCTGTATGGGCTACTaGCATTTGGACTATAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLLSLSSLPMQGHKVFHSCCMGY*HLDYKN Trigger: ATTCTTATAGTCCAAATGCCAGTAGCCCATACAGCA...AGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCTTTAGCTCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTTGCGGCGAGAGGTGCTaGCTGCATATTCTTGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSLAQALLSSLPIFIIYCCGERC*LHILAG Trigger: TCCGGCAAGAATATGCAGCCAGCACCTCTCGCCGCA...ACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGAGCTAAAGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATATCTGTGGGATGGCCTTaGAGGGAAAGGCGAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVSYVNLNIHSLDHPRGISVGWP*RERRGC Trigger: GCAGCCTCGCCTTTCCCTCCAAGGCCATCCCACAGA...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTACTAAACGCTTTCACTaGTTGCCGAAGAGCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: FPSHPFQCKDTRSFTLHSTKRFH*LPKSQW Trigger: CCATTGGCTCTTCGGCAACCAGTGAAAGCGTTTAGT...AGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACACAGGAGGCCCAGGTaGGGAGGTGGTTTGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVSYVNLNIHSLDHPRGIHRRPR*GGGLCE Trigger: TTCACACAAACCACCTCCTCACCTGGGCCTCCTGTG...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | TTATTTCTTTTCAACTGTTACACTGAACAGAGACCTGCTTGCTGTGTGCACATGCGGAGACTTTCTTCCTaGATCCGCGCTAGAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFLFNCYTEQRPACCVHMRRLSS*IRARIC Trigger: GCAGATTCTAGCGCGGATGCAGGAAGAAAGTCTCCG...CATGTGCACACAGCAAGCAGGTCTCTGTTCAGTGTAACAGTTGAAAAGAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | TTGTCAAGAACAAAGACACATCATATCATAGAAACCTGGGAATGGAAACGAGATAGCTGCGGCGAGAGGTaGTGGCTGCATATTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSRTKTHHIIETWEWKRDSCGER*WLHILA Trigger: GGCAAGAATATGCAGCCAGCACCTCTCGCCGCAGCT...ATCTCGTTTCCATTCCCAGGTTTCTATGATATGATGTGTCTTTGTTCTTGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACAATGGAGACGGTGCTaGAGGGGAGCGGAATTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVSYVNLNIHSLDHPRGIQWRRC*RGAEFA Trigger: GGCAAATTCCGCTCCCCTGCAGCACCGTCTCCATTG...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | TTGTCAAGAACAAAGACACATCATATCATAGAAACCTGGGAATGGAAACGAGATCAGGCTGTACAAGCTTaGTGCGAGGCACTGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRTKTHHIIETWEWKRDQAVQA*CEALGC Trigger: GCATCCCAGTGCCTCGCAGCAAGCTTGTACAGCCTG...ATCTCGTTTCCATTCCCAGGTTTCTATGATATGATGTGTCTTTGTTCTTGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | GTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACAAACATCTGGGCGGAGACTTTCTTCCTaGATCCGCGCTAGAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VNLNIHSLDHPRGIQTSGRRLSS*IRARIC Trigger: GCAGATTCTAGCGCGGATGCAGGAAGAAAGTCTCCG...CCCAGATGTTTGTATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTATCCTGAAGGACTGGCTGCATATTCTTaGCGGAGACTTTCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGPSFLSPNLYNLLYPEGLAAYS*RRLSSC Trigger: GCAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCAG...TCCTTCAGGATACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | GAAATGTTTGCAAATCAAACTTCATGTGATCTAAAAGGACCATGCATCATACTGAAGATGAACCAGAGCTaGGGCGAGAGGTGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EMFANQTSCDLKGPCIILKMNQS*GERCWL Trigger: CAGCCAGCACCTCTCGCCGCAGCTCTGGTTCATCTT...CAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATAGAAAGGCGAGGCTGCTaGAAGCGGCTAATCATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVSYVNLNIHSLDHPRGIERRGC*KRLIIG Trigger: GCCTATGATTAGCCGCTTGCAGCAGCCTCGCCTTTC...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGTTCAAATCCCCACCTTTATGTGACCCAACTGCCAATATTTAAAACTGTCAGGGAAAGGCGAGGCTaGTGCAAGCGGCTAATCATA | + |
|
Preference number: 4 (lower is better) Translates to: MSSNPHLYVTQLPIFKTVRERRG*CKRLII Trigger: TATGATTAGCCGCTTGCAGCAGCCTCGCCTTTCCCT...GACAGTTTTAAATATTGGCAGTTGGGTCACATAAAGGTGGGGATTTGAACTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | TTATTTCTTTTCAACTGTTACACTGAACAGAGACCTGCTTGCTGTGTGCACATGCAGAGTCAACCTGTGTaGTCGATGTTCGGGATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFLFNCYTEQRPACCVHMQSQPV*SMFGIG Trigger: ACCTATCCCGAACATCGAGCACACAGGTTGACTCTG...CATGTGCACACAGCAAGCAGGTCTCTGTTCAGTGTAACAGTTGAAAAGAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | GAAATGTTTGCAAATCAAACTTCATGTGATCTAAAAGGACCATGCATCATACTGCAATGGAGACGGTGCTaGAGGGGAGCGGAATTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EMFANQTSCDLKGPCIILQWRRC*RGAEFA Trigger: GGCAAATTCCGCTCCCCTGCAGCACCGTCTCCATTG...CAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTATCCTGAAGGACAGGGGAGCGGAATTTaGCTGGAGAAGGTACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGPSFLSPNLYNLLYPEGQGSGI*LEKVLF Trigger: AAAGAGTACCTTCTCCAGGCAAATTCCGCTCCCCTG...TCCTTCAGGATACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143829.5 |
||
| CDS-3UTR CCA 90 bp | AAGTCTTTAGCTCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTTCAGCCTTTGAGAAGTaGCTGAAGCCTGAGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSLAQALLSSLPIFIIYCSAFEK*LKPEAA Trigger: TGCAGCCTCAGGCTTCAGCCACTTCTCAAAGGCTGA...ACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGAGCTAAAGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143829.5 |
||
| CDS-3UTR CCA 90 bp | CTGGCAATCAAAAACAAGTACACACAAGTCTGTGATGTTGATGCAAGGTGTGGGGGAGCGGAATTTGCCTaGAGAAGGTACTCTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LAIKNKYTQVCDVDARCGGAEFA*RRYSFC Trigger: ACAAAAAGAGTACCTTCTCCAGGCAAATTCCGCTCC...CCCACACCTTGCATCAACATCACAGACTTGTGTGTACTTGTTTTTGATTGCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000143829.5 |
||
| 3UTR CAA 72 bp | CATCTGAAGAGTCTGCATATAAAAGTTGGTTTCAGTTaGGTGACGGTGTCCATGAAGCTGTGGACATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HLKSLHIKVGFS*VTVSMKLWTSV Trigger: CACAGATGTCCACAGCTTCATGGACACCGTCACCAAACTGAAACCAACTTTTATATGCAGACTCTTCAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTAGAGCTGACATAGTTTaGTCAAGTTTGTGGATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPSHPFQCKDTRSFTLHSRADIV*SSLWIR Trigger: CCTTATCCACAAACTTGATCAAACTATGTCAGCTCT...AGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | GAAATGTTTGCAAATCAAACTTCATGTGATCTAAAAGGACCATGCATCATACTGAGGTCGCACTGGTGTTaGGGATGGAGAGTTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EMFANQTSCDLKGPCIILRSHWC*GWRVEA Trigger: GGCTTCAACTCTCCATCCTCAACACCAGTGCGACCT...CAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | GTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACAAACATCTGGGCTATCTATAGAGGACTaGGGGCTGAGTGGAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VNLNIHSLDHPRGIQTSGLSIED*GLSGGF Trigger: AAACCCTCCACTCAGCCCTCAGTCCTCTATAGATAG...CCCAGATGTTTGTATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | TTGTCAAGAACAAAGACACATCATATCATAGAAACCTGGGAATGGAAACGAGATCGTAGAATTGCAAGATaGACCAGAGCTGCGGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSRTKTHHIIETWEWKRDRRIAR*TRAAAR Trigger: TCTCGCCGCAGCTCTGGTTCATCTTGCAATTCTACG...ATCTCGTTTCCATTCCCAGGTTTCTATGATATGATGTGTCTTTGTTCTTGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | TTGTCAAGAACAAAGACACATCATATCATAGAAACCTGGGAATGGAAACGAGATGGTATGGCTGAAGCCTaGGGCTGCATTCGAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: LSRTKTHHIIETWEWKRDGMAEA*GCIRGI Trigger: AATACCTCGAATGCAGCCTCAGGCTTCAGCCATACC...ATCTCGTTTCCATTCCCAGGTTTCTATGATATGATGTGTCTTTGTTCTTGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | GTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACAAACATCTGGGCCAGGAAGTATAAGCTaGTTGACTATGGGAGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VNLNIHSLDHPRGIQTSGPGSIS*LTMGGR Trigger: GCGACCTCCCATAGTCAAGCAGCTTATACTTCCTGG...CCCAGATGTTTGTATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCTTTAGCTCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTGCAGGGTGTACTGCATaGTGCAGACTGTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSLAQALLSSLPIFIIYCAGCTA*CRLSSS Trigger: TGAAGATGACAGTCTGCAGCATGCAGTACACCCTGC...ACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGAGCTAAAGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATAAGGGAAAGGCGAGGCTaGTGCAAGCGGCTAATCATA | + |
|
Preference number: 4 (lower is better) Translates to: TVSYVNLNIHSLDHPRGIRERRG*CKRLII Trigger: TATGATTAGCCGCTTGCAGCAGCCTCGCCTTTCCCT...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | TTGTCAAGAACAAAGACACATCATATCATAGAAACCTGGGAATGGAAACGAGATGCAGGGTGTACTGCATaGTGCAGACTGTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRTKTHHIIETWEWKRDAGCTA*CRLSSS Trigger: TGAAGATGACAGTCTGCAGCATGCAGTACACCCTGC...ATCTCGTTTCCATTCCCAGGTTTCTATGATATGATGTGTCTTTGTTCTTGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATAGAATTTCGAGGCGACTaGTTAGGAGATGGTCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TVSYVNLNIHSLDHPRGIEFRGD*LGDGRG Trigger: ACCACGACCATCTCCTAAGCAGTCGCCTCGAAATTC...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | ATTATGGTCAGGCTGTTTATTAAGGAGGCAACCACATATTACAAGTTCAGCTATAACGCTTTCACTGGTTaGCGAAGAGCCAATGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IMVRLFIKEATTYYKFSYNAFTG*RRANGD Trigger: GTCTCCATTGGCTCTTCGGCAACCAGTGAAAGCGTT...ATAGCTGAACTTGTAATATGTGGTTGCCTCCTTAATAAACAGCCTGACCATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCAAGAACAAAGACACATCATATCATAGAAACCTGGGAATGGAAACGAGATTGTAAATCTGTGGGATaGCCTTGGAGGGAAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSRTKTHHIIETWEWKRDCKSVG*PWRERR Trigger: TCGCCTTTCCCTCCAAGGCCATCCCACAGATTTACA...ATCTCGTTTCCATTCCCAGGTTTCTATGATATGATGTGTCTTTGTTCTTGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | TCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTATCCTGAAGGAACCAAACTAATGGACTaGCAGATTTCTGCATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGPSFLSPNLYNLLYPEGTKLMD*QISALV Trigger: CACCAATGCAGAAATCTGTCAGTCCATTAGTTTGGT...TCCTTCAGGATACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | GAAATGTTTGCAAATCAAACTTCATGTGATCTAAAAGGACCATGCATCATACTGTGTAAATCTGTGGGATaGCCTTGGAGGGAAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: EMFANQTSCDLKGPCIILCKSVG*PWRERR Trigger: TCGCCTTTCCCTCCAAGGCCATCCCACAGATTTACA...CAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATATCGTCTGTAAATCTGTaGGATGGCCTTGGAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVSYVNLNIHSLDHPRGISSVNL*DGLGGK Trigger: TTTCCCTCCAAGGCCATCCCACAGATTTACAGACGA...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | TCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTATCCTGAAGGATTGCCTCTTGAGAGCTaGCATAGTTTGATCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGPSFLSPNLYNLLYPEGLPLES*HSLIKF Trigger: AAACTTGATCAAACTATGTCAGCTCTCAAGAGGCAA...TCCTTCAGGATACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCTTTAGCTCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTTGGAGTCACTTCTACTaGTTTTCACAGAGTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: KSLAQALLSSLPIFIIYCWSHFY*FSQSQP Trigger: AGGTTGACTCTGTGAAAAGCAGTAGAAGTGACTCCA...ACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGAGCTAAAGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTCTTTTCAACTGTTACACTGAACAGAGACCTGCTTGCTGTGTGCACATGTGCTGTATGGGCTACTaGCATTTGGACTATAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFLFNCYTEQRPACCVHMCCMGY*HLDYKN Trigger: ATTCTTATAGTCCAAATGCCAGTAGCCCATACAGCA...CATGTGCACACAGCAAGCAGGTCTCTGTTCAGTGTAACAGTTGAAAAGAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | GAAATGTTTGCAAATCAAACTTCATGTGATCTAAAAGGACCATGCATCATACTGACTAAACGCTTTCACTaGTTGCCGAAGAGCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: EMFANQTSCDLKGPCIILTKRFH*LPKSQW Trigger: CCATTGGCTCTTCGGCAACCAGTGAAAGCGTTTAGT...CAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCAAGAACAAAGACACATCATATCATAGAAACCTGGGAATGGAAACGAGATCCAGAACCAGAGCCATaGTTACTAAACGCTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LSRTKTHHIIETWEWKRDPEPEP*LLNAFT Trigger: AGTGAAAGCGTTTAGTAACCATGGCTCTGGTTCTGG...ATCTCGTTTCCATTCCCAGGTTTCTATGATATGATGTGTCTTTGTTCTTGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCAAGAACAAAGACACATCATATCATAGAAACCTGGGAATGGAAACGAGATGTGGTTTGTGTGAACTaGGTAGTTTCTTGGCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRTKTHHIIETWEWKRDVVCVN*VVSWLP Trigger: TGGTAGCCAAGAAACTACCCAGTTCACACAAACCAC...ATCTCGTTTCCATTCCCAGGTTTCTATGATATGATGTGTCTTTGTTCTTGACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATATGGAGTCACTTCTACTaGTTTTCACAGAGTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: TVSYVNLNIHSLDHPRGIWSHFY*FSQSQP Trigger: AGGTTGACTCTGTGAAAAGCAGTAGAAGTGACTCCA...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | GAAATGTTTGCAAATCAAACTTCATGTGATCTAAAAGGACCATGCATCATACTGCTCCACATCAGGACTTaGGTAATCCAAAACTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EMFANQTSCDLKGPCIILLHIRT*VIQNLP Trigger: AGGCAAGTTTTGGATTACCCAAGTCCTGATGTGGAG...CAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATATTGCCTCTTGAGAGCTaGCATAGTTTGATCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVSYVNLNIHSLDHPRGILPLES*HSLIKF Trigger: AAACTTGATCAAACTATGTCAGCTCTCAAGAGGCAA...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATATTGGCACTTGAAAATTaGAGTCACTTCTACTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVSYVNLNIHSLDHPRGILALEN*SHFYCF Trigger: AAAGCAGTAGAAGTGACTCCAATTTTCAAGTGCCAA...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCAAGAACAAAGACACATCATATCATAGAAACCTGGGAATGGAAACGAGATTTGGCACTTGAAAATTaGAGTCACTTCTACTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSRTKTHHIIETWEWKRDLALEN*SHFYCF Trigger: AAAGCAGTAGAAGTGACTCCAATTTTCAAGTGCCAA...ATCTCGTTTCCATTCCCAGGTTTCTATGATATGATGTGTCTTTGTTCTTGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTCCTTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTCCGCAGAAGGGGCGCTaGGCCGGGGCAGGCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLLSLSSLPMQGHKVFHSPQKGR*AGAGHS Trigger: GGAGTGGCCTGCCCCGGCCAAGCGCCCCTTCTGCGG...AGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS TCA 90 bp | CAGCTCCTGATCACTAAAAGTGCCCCGCCTCGTAGAATTGCAAGATaGACCAGAGCTGCGGCGAGAGGTGCTGGCTGCATATTCTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QLLITKSAPPRRIAR*TRAAARGAGCIFLP Trigger: CGGCAAGAATATGCAGCCAGCACCTCTCGCCGCAGCTCTGGTTCATCTTGCAATTCTACGAGGCGGGGCACTTTTAGTGATCAGGAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 ENSMUST00000200785.2 |
||
| CDS-3UTR CAA 90 bp | GGTGTGGGCGTGCCCTGTGACACCAGTTGGACATGGCTACGTGTGAGCTATGTTGTGGCACTGTTGATATaGCTGGAAGGGTTTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GVGVPCDTSWTWLRVSYVVALLI*LEGFAG Trigger: CCCAGCAAACCCTTCCAGCAATATCAACAGTGCCAC...AACATAGCTCACACGTAGCCATGTCCAACTGGTGTCACAGGGCACGCCCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS GCA 90 bp | CGTGGGGATGGAGAAAACCTATTAAGGGCAGGGTGTACTGCATGCTaGAGACTGTCATCTTCATCATCCAAGCTCTGGGCGTCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGDGENLLRAGCTAC*RLSSSSSKLWASSS Trigger: GGAGCTGGACGCCCAGAGCTTGGATGATGAAGATGACAGTCTGCAGCATGCAGTACACCCTGCCCTTAATAGGTTTTCTCCATCCCCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS GCA 90 bp | TGGCTACCAGAACCAGAGCCATGGTTACTAAACGCTTTCACTGGTTaGCGAAGAGCCAATGGAGACGGTGCTGCAGGGGAGCGGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: WLPEPEPWLLNAFTG*RRANGDGAAGERNL Trigger: CAAATTCCGCTCCCCTGCAGCACCGTCTCCATTGGCTCTTCGGCAACCAGTGAAAGCGTTTAGTAACCATGGCTCTGGTTCTGGTAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| CDS CCA 90 bp | TTCTTGGCTACCAGAACCAGAGCCATGGTTACTAAACGCTTTCACTaGTTGCCGAAGAGCCAATGGAGACGGTGCTGCAGGGGAGCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FLATRTRAMVTKRFH*LPKSQWRRCCRGAE Trigger: TTCCGCTCCCCTGCAGCACCGTCTCCATTGGCTCTTCGGCAACCAGTGAAAGCGTTTAGTAACCATGGCTCTGGTTCTGGTAGCCAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS CCA 90 bp | AGAGCCATGGTTACTAAACGCTTTCACTGGTTGCCGAAGAGCCAATaGAGACGGTGCTGCAGGGGAGCGGAATTTGCCTGGAGAAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RAMVTKRFHWLPKSQ*RRCCRGAEFAWRRY Trigger: GTACCTTCTCCAGGCAAATTCCGCTCCCCTGCAGCACCGTCTCCATTGGCTCTTCGGCAACCAGTGAAAGCGTTTAGTAACCATGGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143829.5 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTTAGCTCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTCCGCAGAAGGGGCGCTaGGCCGGGGCAGGCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSLAQALLSSLPIFIIYCPQKGR*AGAGHS Trigger: GGAGTGGCCTGCCCCGGCCAAGCGCCCCTTCTGCGG...ACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGAGCTAAAGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTCCTTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTACAGGCTGTACAAGCTaGCTGCGAGGCACTGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PLLSLSSLPMQGHKVFHSTGCTS*LRGTGM Trigger: CATCCCAGTGCCTCGCAGCAAGCTTGTACAGCCTGT...AGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| CDS TCA 90 bp | TCCTCATTGCAGTTGTCCCTGCAGGTCTGGTTAGAGTGGCACTGTTaGTATTGCTGGAAGGGTTTGCTGGGGCTGAGTTCTGCACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SSLQLSLQVWLEWHC*YCWKGLLGLSSAPQ Trigger: CTGTGGTGCAGAACTCAGCCCCAGCAAACCCTTCCAGCAATATCAACAGTGCCACTCTAACCAGACCTGCAGGGACAACTGCAATGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS GCA 90 bp | TTCCGTGGGGATGGAGAAAACCTATTAAGGGCAGGGTGTACTGCATaGTGCAGACTGTCATCTTCATCATCCAAGCTCTGGGCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FRGDGENLLRAGCTA*CRLSSSSSKLWASS Trigger: GCTGGACGCCCAGAGCTTGGATGATGAAGATGACAGTCTGCAGCATGCAGTACACCCTGCCCTTAATAGGTTTTCTCCATCCCCACGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| CDS CCA 90 bp | AGAGCCATGGTTACTAAACGCTTTCACTGGTTGCCGAAGAGCCAATaGAGACGGTGCTGCAGGGGAGCGGAATTTGCCTGGAGAAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: RAMVTKRFHWLPKSQ*RRCCRGAEFAWRRY Trigger: ATACCTTCTCCAGGCAAATTCCGCTCCCCTGCAGCACCGTCTCCATTGGCTCTTCGGCAACCAGTGAAAGCGTTTAGTAACCATGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144843.8 |
||
| CDS TCA 90 bp | TCCAGGAAGTATAAGCTGCTTGACTATGGGAGGTCGCACTGGTGTTaGGGATGGAGAGTTGAAGCCACTGCTGTATGGGCTACTGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: SRKYKLLDYGRSHWC*GWRVEATAVWATGI Trigger: AATGCCAGTAGCCCATACAGCAGTGGCTTCAACTCTCCATCCTCAACACCAGTGCGACCTCCCATAGTCAAGCAGCTTATACTTCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 ENSMUST00000200785.2 |
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| CDS TCA 90 bp | TGCAGACTGTCATCTTCATCATCCAAGCTCTGGGCGTCCAGCTCCTaGTCACTAAAAGTGCCCCGCCTCGTAGAATTGCAAGATGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: CRLSSSSSKLWASSS*SLKVPRLVELQDEP Trigger: TGGTTCATCTTGCAATTCTACGAGGCGGGGCACTTTTAGTGATCAGGAGCTGGACGCCCAGAGCTTGGATGATGAAGATGACAGTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS GCA 90 bp | ACTAAACGCTTTCACTGGTTGCCGAAGAGCCAATGGAGACGGTGCTaGAGGGGAGCGGAATTTGCCTGGAGAAGGTACTCTTTTTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TKRFHWLPKSQWRRC*RGAEFAWRRYSFCR Trigger: TCTACAAAAAGAGTACCTTCTCCAGGCAAATTCCGCTCCCCTGCAGCACCGTCTCCATTGGCTCTTCGGCAACCAGTGAAAGCGTTTAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143829.5 |
||
| CDS GCA 90 bp | GTTACTAAACGCTTTCACTGGTTGCCGAAGAGCCAATGGAGACGGTaGTGCAGGGGAGCGGAATTTGCCTGGAGAAGGTACTCTTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VTKRFHWLPKSQWRR*CRGAEFAWRRYSFC Trigger: ACAAAAAGAGTACCTTCTCCAGGCAAATTCCGCTCCCCTGCAGCACCGTCTCCATTGGCTCTTCGGCAACCAGTGAAAGCGTTTAGTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143829.5 |
||
| CDS-3UTR CAA 90 bp | CCCCTCCTTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTGGAAGTATAAGCTGCTaGACTATGGGAGGTCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: PLLSLSSLPMQGHKVFHSGSISC*TMGGRT Trigger: AGTGCGACCTCCCATAGTCAAGCAGCTTATACTTCC...AGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | GATCTAAAAGGACCATGCATCATACTGTCAAAACCGGACACCTGTACAGTGAGTGCAGGCCACTCCTCATaGCAGTTGTCCCTGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: DLKGPCIILSKPDTCTVSAGHSS*QLSLQV Trigger: GACCTGCAGGGACAACTGCAATGAGGAGTGGCCTGC...ACTCACTGTACAGGTGTCCGGTTTTGACAGTATGATGCATGGTCCTTTTAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS CCA 90 bp | TCTTCATTTTTAACATTGCTCGTCTGTAAATCTGTGGGATGGCCTTaGAGGGAAAGGCGAGGCTGCTGCAAGCGGCTAATCATAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSFLTLLVCKSVGWP*RERRGCCKRLIIGC Trigger: ACAGCCTATGATTAGCCGCTTGCAGCAGCCTCGCCTTTCCCTCCAAGGCCATCCCACAGATTTACAGACGAGCAATGTTAAAAATGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS CCA 90 bp | GTTTGTGTGAACTGGGTAGTTTCTTGGCTACCAGAACCAGAGCCATaGTTACTAAACGCTTTCACTGGTTGCCGAAGAGCCAATGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VCVNWVVSWLPEPEP*LLNAFTGCRRANGD Trigger: GTCTCCATTGGCTCTTCGGCAACCAGTGAAAGCGTTTAGTAACCATGGCTCTGGTTCTGGTAGCCAAGAAACTACCCAGTTCACACAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTGTTGAGGATGGAGAGTaGAAGCCACTGCTGTATGGG | + |
|
Preference number: 5 (lower is better) Translates to: FPSHPFQCKDTRSFTLHSVEDGE*KPLLYG Trigger: CCCATACAGCAGTGGCTTCAACTCTCCATCCTCAAC...AGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCAATCAAAAACAAGTACACACAAGTCTGTGATGTTGATGCAAGGTGTGGGCCCCGCCTCGTAGAATaGCAAGATGAACCAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAIKNKYTQVCDVDARCGPRLVE*QDEPEL Trigger: CAGCTCTGGTTCATCTTGCAATTCTACGAGGCGGGG...CCCACACCTTGCATCAACATCACAGACTTGTGTGTACTTGTTTTTGATTGCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTCACTCCTCATTGCAGTaGTCCCTGCAGGTCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: FPSHPFQCKDTRSFTLHSHSSLQ*SLQVWL Trigger: TAACCAGACCTGCAGGGACAACTGCAATGAGGAGTG...AGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | TTATTTCTTTTCAACTGTTACACTGAACAGAGACCTGCTTGCTGTGTGCACATGGCAGGCCACTCCTCATaGCAGTTGTCCCTGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LFLFNCYTEQRPACCVHMAGHSS*QLSLQV Trigger: GACCTGCAGGGACAACTGCAATGAGGAGTGGCCTGC...CATGTGCACACAGCAAGCAGGTCTCTGTTCAGTGTAACAGTTGAAAAGAAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | GTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACAAACATCTGGGATCTGTGGGATGGCCTaGGAGGGAAAGGCGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VNLNIHSLDHPRGIQTSGICGMA*EGKARL Trigger: CAGCCTCGCCTTTCCCTCCAAGGCCATCCCACAGAT...CCCAGATGTTTGTATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTCCTTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTTCCTCCATTTGGCACTaGAAAATTGGAGTCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PLLSLSSLPMQGHKVFHSSSIWH*KIGVTS Trigger: AGAAGTGACTCCAATTTTCAAGTGCCAAATGGAGGA...AGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAAGGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | TTATTTCTTTTCAACTGTTACACTGAACAGAGACCTGCTTGCTGTGTGCACATGACAGGCTGTACAAGCTaGCTGCGAGGCACTGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LFLFNCYTEQRPACCVHMTGCTS*LRGTGM Trigger: CATCCCAGTGCCTCGCAGCAAGCTTGTACAGCCTGT...CATGTGCACACAGCAAGCAGGTCTCTGTTCAGTGTAACAGTTGAAAAGAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTGAGTTACGTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATAATCTGTGGGATGGCCTaGGAGGGAAAGGCGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TVSYVNLNIHSLDHPRGIICGMA*EGKARL Trigger: CAGCCTCGCCTTTCCCTCCAAGGCCATCCCACAGAT...TATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGACGTAACTCACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGTTCAAATCCCCACCTTTATGTGACCCAACTGCCAATATTTAAAACTGTCGCAGGGGAGCGGAATTaGCCTGGAGAAGGTATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MSSNPHLYVTQLPIFKTVAGERN*PGEGMA Trigger: AGCCATACCTTCTCCAGGCAAATTCCGCTCCCCTGC...GACAGTTTTAAATATTGGCAGTTGGGTCACATAAAGGTGGGGATTTGAACTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144843.8 |
||
| CDS CCA 90 bp | AGTTTTTCTTCATTTTTAACATTGCTCGTCTGTAAATCTGTGGGATaGCCTTGGAGGGAAAGGCGAGGCTGCTGCAAGCGGCTAATCATA | + |
|
Preference number: 5 (lower is better) Translates to: SFSSFLTLLVCKSVG*PWRERRGCCKRLII Trigger: TATGATTAGCCGCTTGCAGCAGCCTCGCCTTTCCCTCCAAGGCCATCCCACAGATTTACAGACGAGCAATGTTAAAAATGAAGAAAAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCAATCAAAAACAAGTACACACAAGTCTGTGATGTTGATGCAAGGTGTGGGACTCCACATCAGGACTaGGGTAATCCAAAACTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LAIKNKYTQVCDVDARCGTPHQD*GNPKLA Trigger: GGCAAGTTTTGGATTACCCAAGTCCTGATGTGGAGT...CCCACACCTTGCATCAACATCACAGACTTGTGTGTACTTGTTTTTGATTGCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | TTATTTCTTTTCAACTGTTACACTGAACAGAGACCTGCTTGCTGTGTGCACATGGCTGGCTGCATATTCTaGCCGGAGACTTTCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LFLFNCYTEQRPACCVHMAGCIF*PETFFL Trigger: CAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCAGC...CATGTGCACACAGCAAGCAGGTCTCTGTTCAGTGTAACAGTTGAAAAGAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | GTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACAAACATCTGGGCCCCGCCTCGTAGAATaGCAAGATGAACCAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VNLNIHSLDHPRGIQTSGPRLVE*QDEPEL Trigger: CAGCTCTGGTTCATCTTGCAATTCTACGAGGCGGGG...CCCAGATGTTTGTATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTGTTAGAGTGGCACTGTaGATATTGCTGGAAGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FPSHPFQCKDTRSFTLHSVRVAL*ILLEGF Trigger: AAACCCTTCCAGCAATATCAACAGTGCCACTCTAAC...AGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | GTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACAAACATCTGGGGCAGGGGAGCGGAATTaGCCTGGAGAAGGTACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VNLNIHSLDHPRGIQTSGAGERN*PGEGTL Trigger: AAGAGTACCTTCTCCAGGCAAATTCCGCTCCCCTGC...CCCAGATGTTTGTATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143829.5 |
||
| CDS GCA 90 bp | TCTGATGAACTTTTGAAGTTACCTGAATTTCCAGGAAGTATAAGCTaGTTGACTATGGGAGGTCGCACTGGTGTTGAGGATGGAGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SDELLKLPEFPGSIS*LTMGGRTGVEDGEL Trigger: CAACTCTCCATCCTCAACACCAGTGCGACCTCCCATAGTCAAGCAGCTTATACTTCCTGGAAATTCAGGTAACTTCAAAAGTTCATCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 ENSMUST00000200785.2 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTTAGCTCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTGCTGGCTGCATATTCTaGCCGGAGACTTTCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KSLAQALLSSLPIFIIYCAGCIF*PETFFL Trigger: CAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCAGC...ACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGAGCTAAAGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTTAGCTCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTCACTCCTCATTGCAGTaGTCCCTGCAGGTCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: KSLAQALLSSLPIFIIYCHSSLQ*SLQVWL Trigger: TAACCAGACCTGCAGGGACAACTGCAATGAGGAGTG...ACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGAGCTAAAGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | TTATTTCTTTTCAACTGTTACACTGAACAGAGACCTGCTTGCTGTGTGCACATGACTCCACATCAGGACTaGGGTAATCCAAAACTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LFLFNCYTEQRPACCVHMTPHQD*GNPKLA Trigger: GGCAAGTTTTGGATTACCCAAGTCCTGATGTGGAGT...CATGTGCACACAGCAAGCAGGTCTCTGTTCAGTGTAACAGTTGAAAAGAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCCTCTCATCCCTTCCAATGCAAGGACACAAGGTCTTTCACTCTACACTCTATGGGCTACTGGCATTaGGACTATAAGAATTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FPSHPFQCKDTRSFTLHSMGYWH*DYKNLS Trigger: ACTCAAATTCTTATAGTCCAAATGCCAGTAGCCCAT...AGAGTGTAGAGTGAAAGACCTTGTGTCCTTGCATTGGAAGGGATGAGAGGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTTAGCTCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTGGAAGTATAAGCTGCTaGACTATGGGAGGTCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: KSLAQALLSSLPIFIIYCGSISC*TMGGRT Trigger: AGTGCGACCTCCCATAGTCAAGCAGCTTATACTTCC...ACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGAGCTAAAGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTTAGCTCAGGCCCTTCTTTCCTCTCTCCCAATCTTTATAATTTACTGTAAACGCTTTCACTGGTaGCCGAAGAGCCAATGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KSLAQALLSSLPIFIIYCKRFHW*PKSQWR Trigger: TCTCCATTGGCTCTTCGGCAACCAGTGAAAGCGTTT...ACAGTAAATTATAAAGATTGGGAGAGAGGAAAGAAGGGCCTGAGCTAAAGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | TTGTCAAGAACAAAGACACATCATATCATAGAAACCTGGGAATGGAAACGAGATAAACGCTTTCACTGGTaGCCGAAGAGCCAATGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSRTKTHHIIETWEWKRDKRFHW*PKSQWR Trigger: TCTCCATTGGCTCTTCGGCAACCAGTGAAAGCGTTT...ATCTCGTTTCCATTCCCAGGTTTCTATGATATGATGTGTCTTTGTTCTTGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | GAAATGTTTGCAAATCAAACTTCATGTGATCTAAAAGGACCATGCATCATACTGGTGGCACTGTTGATATaGCTGGAAGGGTTTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EMFANQTSCDLKGPCIILVALLI*LEGFAG Trigger: CCCAGCAAACCCTTCCAGCAATATCAACAGTGCCAC...CAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | ATTATGGTCAGGCTGTTTATTAAGGAGGCAACCACATATTACAAGTTCAGCTATGTTAGAGTGGCACTGTaGATATTGCTGGAAGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IMVRLFIKEATTYYKFSYVRVAL*ILLEGF Trigger: AAACCCTTCCAGCAATATCAACAGTGCCACTCTAAC...ATAGCTGAACTTGTAATATGTGGTTGCCTCCTTAATAAACAGCCTGACCATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144843.8 |
||
| CDS TCA 90 bp | TCTTCATCTAATTCTGAAGCACTTAACTCACTATCTATAGAGGACTaGGGGCTGAGTGGAGGGTTTCTATCTGATGAACTTTTGAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SSSNSEALNSLSIED*GLSGGFLSDELLKL Trigger: TAACTTCAAAAGTTCATCAGATAGAAACCCTCCACTCAGCCCTCAGTCCTCTATAGATAGTGAGTTAAGTGCTTCAGAATTAGATGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 ENSMUST00000200785.2 |
||
| CDS-3UTR CAA 90 bp | GTCAATCTGAACATACATAGTCTAGATCATCCTAGAGGTATACAAACATCTGGGATGGGCTACTGGCATTaGGACTATAAGAATTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VNLNIHSLDHPRGIQTSGMGYWH*DYKNLS Trigger: ACTCAAATTCTTATAGTCCAAATGCCAGTAGCCCAT...CCCAGATGTTTGTATACCTCTAGGATGATCTAGACTATGTATGTTCAGATTGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS-3UTR CAA 90 bp | GAAATGTTTGCAAATCAAACTTCATGTGATCTAAAAGGACCATGCATCATACTGTCCTCCATTTGGCACTaGAAAATTGGAGTCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EMFANQTSCDLKGPCIILSSIWH*KIGVTS Trigger: AGAAGTGACTCCAATTTTCAAGTGCCAAATGGAGGA...CAGTATGATGCATGGTCCTTTTAGATCACATGAAGTTTGATTTGCAAACATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS CCA 72 bp | CCAGCAAGGAGGTGGCGTCCCGCAGGTCCTCGCTGCTaGTCCGTCGCGGGCCGGAGCCCGCCCCGCCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PARRWRPAGPRC*SVAGRSPPRRW Trigger: CCAGCGGCGGGGCGGGCTCCGGCCCGCGACGGACCAGCAGCGAGGACCTGCGGGACGCCACCTCCTTGCTGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS CCA 72 bp | CGCGCCCGACGAAGGGGTGGACACGCCGACCCGAGCTaGGCTGCCGGGCCCGAGGAGGCCTGCACCCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RARRRGGHADPS*AAGPEEACTLH Trigger: GTGCAGGGTGCAGGCCTCCTCGGGCCCGGCAGCCCAGCTCGGGTCGGCGTGTCCACCCCTTCGTCGGGCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS GCA 72 bp | CGCTTTCACTGGTTGCCGAAGAGCCAATGGAGACGGTaGTGCAGGGGAGCGGAATTTGCCTGGAGAAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: RFHWLPKSQWRR*CRGAEFAWRRY Trigger: GTACCTTCTCCAGGCAAATTCCGCTCCCCTGCAGCACCGTCTCCATTGGCTCTTCGGCAACCAGTGAAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143829.5 |
||
| CDS CCA 72 bp | AAGGCGAGGCTGCTGCAAGCGGCTAATCATAGGCTGTaGGGACGCTCTACTGTATTCTATTCCCCGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KARLLQAANHRL*GRSTVFYSPGR Trigger: CCTGCCCGGGGAATAGAATACAGTAGAGCGTCCCCACAGCCTATGATTAGCCGCTTGCAGCAGCCTCGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS GCA 72 bp | TTTCACTGGTTGCCGAAGAGCCAATGGAGACGGTGCTaGAGGGGAGCGGAATTTGCCTGGAGAAGGTATGGC | + |
|
Preference number: 6 (lower is better) Translates to: FHWLPKSQWRRC*RGAEFAWRRYG Trigger: GCCATACCTTCTCCAGGCAAATTCCGCTCCCCTGCAGCACCGTCTCCATTGGCTCTTCGGCAACCAGTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144843.8 |
||
| CDS GCA 72 bp | CGCTTTCACTGGTTGCCGAAGAGCCAATGGAGACGGTaGTGCAGGGGAGCGGAATTTGCCTGGAGAAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: RFHWLPKSQWRR*CRGAEFAWRRY Trigger: ATACCTTCTCCAGGCAAATTCCGCTCCCCTGCAGCACCGTCTCCATTGGCTCTTCGGCAACCAGTGAAAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144843.8 |
||
| CDS GCA 72 bp | GCAGGAGACCGTGAACGAGGTGAATTTCGAGGCGACTaGTTAGGAGATGGTCGTGGTGAATTCCGTGGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: AGDRERGEFRGD*LGDGRGEFRGD Trigger: ATCCCCACGGAATTCACCACGACCATCTCCTAAGCAGTCGCCTCGAAATTCACCTCGTTCACGGTCTCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS GCA 72 bp | GAACCAGAGCCATGGTTACTAAACGCTTTCACTGGTTaGCGAAGAGCCAATGGAGACGGTGCTGCAGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: EPEPWLLNAFTG*RRANGDGAAGE Trigger: CTCCCCTGCAGCACCGTCTCCATTGGCTCTTCGGCAACCAGTGAAAGCGTTTAGTAACCATGGCTCTGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS GCA 72 bp | TTTCACTGGTTGCCGAAGAGCCAATGGAGACGGTGCTaGAGGGGAGCGGAATTTGCCTGGAGAAGGTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: FHWLPKSQWRRC*RGAEFAWRRYS Trigger: AGAGTACCTTCTCCAGGCAAATTCCGCTCCCCTGCAGCACCGTCTCCATTGGCTCTTCGGCAACCAGTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143829.5 |
||
| CDS CCA 72 bp | GTTACTAAACGCTTTCACTGGTTGCCGAAGAGCCAATaGAGACGGTGCTGCAGGGGAGCGGAATTTGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VTKRFHWLPKSQ*RRCCRGAEFAW Trigger: CCAGGCAAATTCCGCTCCCCTGCAGCACCGTCTCCATTGGCTCTTCGGCAACCAGTGAAAGCGTTTAGTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS TCA 72 bp | CTATGGGAGGTCGCACTGGTGTTGAGGATGGAGAGTTaGAGCCACTGCTGTATGGGCTACTGGCATTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LWEVALVLRMES*SHCCMGYWHLD Trigger: GTCCAAATGCCAGTAGCCCATACAGCAGTGGCTTCAACTCTCCATCCTCAACACCAGTGCGACCTCCCATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 ENSMUST00000200785.2 |
||
| CDS TCA 72 bp | ATCACTAAAAGTGCCCCGCCTCGTAGAATTGCAAGATaGACCAGAGCTGCGGCGAGAGGTGCTGGCTGCATA | + |
|
Preference number: 6 (lower is better) Translates to: ITKSAPPRRIAR*TRAAARGAGCI Trigger: TATGCAGCCAGCACCTCTCGCCGCAGCTCTGGTTCATCTTGCAATTCTACGAGGCGGGGCACTTTTAGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 ENSMUST00000200785.2 |
||
| CDS CCA 72 bp | ACCAGAACCAGAGCCATGGTTACTAAACGCTTTCACTaGTTGCCGAAGAGCCAATGGAGACGGTGCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TRTRAMVTKRFH*LPKSQWRRCCR Trigger: CCTGCAGCACCGTCTCCATTGGCTCTTCGGCAACCAGTGAAAGCGTTTAGTAACCATGGCTCTGGTTCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS CAA 72 bp | GCAGTTGTCCCTGCAGGTCTGGTTAGAGTGGCACTGTaGATATTGCTGGAAGGGTTTGCTGGGGCTGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: AVVPAGLVRVAL*ILLEGFAGAEF Trigger: GAACTCAGCCCCAGCAAACCCTTCCAGCAATATCAACAGTGCCACTCTAACCAGACCTGCAGGGACAACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS CAA 90 bp | TTGGCTACCAGAACCAGAGCCATGGTTACTAAACGCTTTCACTGGTaGCCGAAGAGCCAATGGAGACGGTGCTGCAGGGGAGCGGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: LATRTRAMVTKRFHW*PKSQWRRCCRGAEF Trigger: AAATTCCGCTCCCCTGCAGCACCGTCTCCATTGGCTCTTCGGCAACCAGTGAAAGCGTTTAGTAACCATGGCTCTGGTTCTGGTAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS CAA 90 bp | CTCCTCATTGCAGTTGTCCCTGCAGGTCTGGTTAGAGTGGCACTGTaGATATTGCTGGAAGGGTTTGCTGGGGCTGAGTTCTGCACCACA | + |
|
Preference number: 6 (lower is better) Translates to: LLIAVVPAGLVRVAL*ILLEGFAGAEFCTT Trigger: TGTGGTGCAGAACTCAGCCCCAGCAAACCCTTCCAGCAATATCAACAGTGCCACTCTAACCAGACCTGCAGGGACAACTGCAATGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS TCA 72 bp | GAGCGGAATTTGCCTGGAGAAGGTATGGCTGAAGCCTaGGGCTGCATTCGAGGTATTCCTCCATTTGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: ERNLPGEGMAEA*GCIRGIPPFGT Trigger: AGTGCCAAATGGAGGAATACCTCGAATGCAGCCTCAGGCTTCAGCCATACCTTCTCCAGGCAAATTCCGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144843.8 |
||
| CDS CCA 72 bp | AATTGCAAGATGAACCAGAGCTGCGGCGAGAGGTGCTaGCTGCATATTCTTGCCGGAGACTTTCTTCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: NCKMNQSCGERC*LHILAGDFLPA Trigger: TGCAGGAAGAAAGTCTCCGGCAAGAATATGCAGCCAGCACCTCTCGCCGCAGCTCTGGTTCATCTTGCAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 ENSMUST00000200785.2 |
||
| CDS CCA 72 bp | TTAACATTGCTCGTCTGTAAATCTGTGGGATGGCCTTaGAGGGAAAGGCGAGGCTGCTGCAAGCGGCTAATC | + |
|
Preference number: 6 (lower is better) Translates to: LTLLVCKSVGWP*RERRGCCKRLI Trigger: GATTAGCCGCTTGCAGCAGCCTCGCCTTTCCCTCCAAGGCCATCCCACAGATTTACAGACGAGCAATGTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS TCA 72 bp | TATAAGCTGCTTGACTATGGGAGGTCGCACTGGTGTTaGGGATGGAGAGTTGAAGCCACTGCTGTATGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: YKLLDYGRSHWC*GWRVEATAVWA Trigger: AGCCCATACAGCAGTGGCTTCAACTCTCCATCCTCAACACCAGTGCGACCTCCCATAGTCAAGCAGCTTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 ENSMUST00000200785.2 |
||
| CDS TCA 72 bp | TCATCTTCATCATCCAAGCTCTGGGCGTCCAGCTCCTaGTCACTAAAAGTGCCCCGCCTCGTAGAATTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSKLWASSS*SLKVPRLVELQ Trigger: TTGCAATTCTACGAGGCGGGGCACTTTTAGTGATCAGGAGCTGGACGCCCAGAGCTTGGATGATGAAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS GCA 72 bp | GGAGAAAACCTATTAAGGGCAGGGTGTACTGCATGCTaGAGACTGTCATCTTCATCATCCAAGCTCTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GENLLRAGCTAC*RLSSSSSKLWA Trigger: CGCCCAGAGCTTGGATGATGAAGATGACAGTCTGCAGCATGCAGTACACCCTGCCCTTAATAGGTTTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS CCA 72 bp | AACTGGGTAGTTTCTTGGCTACCAGAACCAGAGCCATaGTTACTAAACGCTTTCACTGGTTGCCGAAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: NWVVSWLPEPEP*LLNAFTGCRRA Trigger: GGCTCTTCGGCAACCAGTGAAAGCGTTTAGTAACCATGGCTCTGGTTCTGGTAGCCAAGAAACTACCCAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
||
| CDS CAA 72 bp | AGAGCCAATGGAGACGGTGCTGCAGGGGAGCGGAATTaGCCTGGAGAAGGTACTCTTTTTGTAGATGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: RANGDGAAGERN*PGEGTLFVDEV Trigger: AACTTCATCTACAAAAAGAGTACCTTCTCCAGGCAAATTCCGCTCCCCTGCAGCACCGTCTCCATTGGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143829.5 |
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| CDS GCA 72 bp | GATGGAGAAAACCTATTAAGGGCAGGGTGTACTGCATaGTGCAGACTGTCATCTTCATCATCCAAGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: DGENLLRAGCTA*CRLSSSSSKLW Trigger: CCAGAGCTTGGATGATGAAGATGACAGTCTGCAGCATGCAGTACACCCTGCCCTTAATAGGTTTTCTCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| CDS GCA 72 bp | TGGGGATGGAGAAAACCTATTAAGGGCAGGGTGTACTaGATGCTGCAGACTGTCATCTTCATCATCCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: WGWRKPIKGRVY*MLQTVIFIIQA Trigger: AGCTTGGATGATGAAGATGACAGTCTGCAGCATGCAGTACACCCTGCCCTTAATAGGTTTTCTCCATCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 |
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| CDS CAA 72 bp | TTGAAGTTACCTGAATTTCCAGGAAGTATAAGCTGCTaGACTATGGGAGGTCGCACTGGTGTTGAGGATGGA | + |
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Preference number: 6 (lower is better) Translates to: LKLPEFPGSISC*TMGGRTGVEDG Trigger: TCCATCCTCAACACCAGTGCGACCTCCCATAGTCAAGCAGCTTATACTTCCTGGAAATTCAGGTAACTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 ENSMUST00000200785.2 |
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| CDS GCA 72 bp | CTTTTGAAGTTACCTGAATTTCCAGGAAGTATAAGCTaGTTGACTATGGGAGGTCGCACTGGTGTTGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: LLKLPEFPGSIS*LTMGGRTGVED Trigger: ATCCTCAACACCAGTGCGACCTCCCATAGTCAAGCAGCTTATACTTCCTGGAAATTCAGGTAACTTCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143829.5 ENSMUST00000144843.8 ENSMUST00000200785.2 |
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