Pregenerated sensors for SLAIN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055717Ensembl transcript IDs: ENSMUST00000069443.14, ENSMUST00000159456.2, ENSMUST00000160805.8, ENSMUST00000162818.8
Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATaGTTACCCAGCCAGCTAGGTAACACACCCTCATTTTCACTTCTT | + |
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Preference number: 1 (lower is better) Translates to: AVRVVSVKGKASQHP*LPSQLGNTPSFSLL Trigger: AAGAAGTGAAAATGAGGGTGTGTTACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTTGCGTGTGGTTAGCGTaGAGGGGAAAGCATCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: QGTFKNLIWQSIIDTPQSCVWLA*RGKHPS Trigger: GCTGGGATGCTTTCCCCTTCACGCTAACCACACGCA...AGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATGGTGTGTTTTTGCTGATATGCGTGTGGTTAGCGTaGAGGGGAAAGCATCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: CSFNVKLCLKSYGVFLLICVWLA*RGKHPS Trigger: GCTGGGATGCTTTCCCCTTCACGCTAACCACACGCA...TATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 |
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| 3UTR-3UTR TCA 90 bp | GAACAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATGCGTGTGGTTAGCGTaGAGGGGAAAGCATCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: EQGTFKNLIWQSIIDTPQCVWLA*RGKHPS Trigger: GCTGGGATGCTTTCCCCTTCACGCTAACCACACGCA...TTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAAAAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGGCATCCCAGCATCCATaGTTACCCAGCCAGCTAGGT | + |
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Preference number: 2 (lower is better) Translates to: LKKYSDTEQFYKNFLDLRASQHP*LPSQLG Trigger: ACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGC...CCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTTTTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTTTAGTCTCTGGTGATTaGTCCACTGAAAACGATGCC | + |
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Preference number: 2 (lower is better) Translates to: QGTFKNLIWQSIIDTPQSLVSGD*STENDA Trigger: GGCATCGTTTTCAGTGGACCAATCACCAGAGACTAA...AGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| 3UTR TCA 72 bp | GGTCCACTGAAAACGATGCCGTGCGTGTGGTTAGCGTaGAGGGGAAAGCATCCCAGCATCCATGGTTACCCA | + |
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Preference number: 3 (lower is better) Translates to: GPLKTMPCVWLA*RGKHPSIHGYP Trigger: TGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTTTTCAGTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| 3UTR-3UTR CAA 90 bp | GGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCACCGCGGCCGCGGGTTaGGGAACGCCGCAGTATCTC | + |
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Preference number: 3 (lower is better) Translates to: GTFKNLIWQSIIDTPQSLTAAAG*GTPQYL Trigger: GAGATACTGCGGCGTTCCCAAACCCGCGGCCGCGGT...GAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| 3UTR-3UTR CAA 90 bp | TGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATGGTGTGTTTTTGCTGATAACCGCGGCCGCGGGTTaGGGAACGCCGCAGTATCTC | + |
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Preference number: 3 (lower is better) Translates to: CSFNVKLCLKSYGVFLLITAAAG*GTPQYL Trigger: GAGATACTGCGGCGTTCCCAAACCCGCGGCCGCGGT...TATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 |
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| 3UTR-3UTR CAA 90 bp | CAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTACCGCGGCCGCGGGTTaGGGAACGCCGCAGTATCTC | + |
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Preference number: 3 (lower is better) Translates to: QGTFKNLIWQSIIDTPQSTAAAG*GTPQYL Trigger: GAGATACTGCGGCGTTCCCAAACCCGCGGCCGCGGT...AGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| 3UTR-3UTR CAA 90 bp | TGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATGGTGTGTTTTTGCTGATATATGGCAAAGCATTATaGATACGCCTCAATCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: CSFNVKLCLKSYGVFLLIYGKAL*IRLNLS Trigger: AGAGAGATTGAGGCGTATCAATAATGCTTTGCCATA...TATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 |
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| 3UTR CCA 72 bp | GTGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATaGTGTGTTTTTGCTGATATATCCCTAGAGCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: VLVQRKIMSQIV*CVFADISLELK Trigger: TTTTAGCTCTAGGGATATATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 |
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| CDS-3UTR GCA 90 bp | CGATACCGCGGCCGCGGGTTTGGGAACGCCGCAGTATCTCAGGCAGAGAGTAGGTGCTGCCGCTGCTGCTaGTGCCTTGAACAGTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RYRGRGFGNAAVSQAESRCCRCC*CLEQLG Trigger: GCCCAACTGTTCAAGGCAGCAGCAGCAGCGGCAGCA...CCTACTCTCTGCCTGAGATACTGCGGCGTTCCCAAACCCGCGGCCGCGGTATCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR CCA 90 bp | TCCACTGAAAACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGGGGAGGGCGCGGGGCTaGGCAAGCAGTAGGTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: STENDAVRVVSVKGKASQGRARG*ASSRCP Trigger: CGGGCACCTACTGCTTGCCCAGCCCCGCGCCCTCCC...CTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTTTTCAGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
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| CDS-3UTR GCA 90 bp | GTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTGGCGCGTCAGCCGGCTaGAGGCTGCAGAGCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: VSVKGKASQHPWLPSQLGGASAG*RLQSRE Trigger: CTCCCTGCTCTGCAGCCTGCAGCCGGCTGACGCGCC...ACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCTAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
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| CDS-3UTR GCA 90 bp | CGATACCGCGGCCGCGGGTTTGGGAACGCCGCAGTATCTCAGGCAGAGAGTAGGTGCCGCTGCTGCTGCTaGCTTGAACAGTTGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RYRGRGFGNAAVSQAESRCRCCC*LEQLGS Trigger: TGAGCCCAACTGTTCAAGGCAGCAGCAGCAGCGGCA...CCTACTCTCTGCCTGAGATACTGCGGCGTTCCCAAACCCGCGGCCGCGGTATCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR CCA 90 bp | CGATACCGCGGCCGCGGGTTTGGGAACGCCGCAGTATCTCAGGCAGAGAGTAGGAGCGCAGAGAGCGTCTaGCTGCTTCCATCTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RYRGRGFGNAAVSQAESRSAESV*LLPSQE Trigger: CTCCTGAGATGGAAGCAGCCAGACGCTCTCTGCGCT...CCTACTCTCTGCCTGAGATACTGCGGCGTTCCCAAACCCGCGGCCGCGGTATCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
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| CDS-3UTR TCA 90 bp | CGATACCGCGGCCGCGGGTTTGGGAACGCCGCAGTATCTCAGGCAGAGAGTAGGCATCCCTCAGTGTGCTaGGTGAAGACAGAGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RYRGRGFGNAAVSQAESRHPSVC*VKTEAW Trigger: CCAAGCCTCTGTCTTCACTCAGCACACTGAGGGATG...CCTACTCTCTGCCTGAGATACTGCGGCGTTCCCAAACCCGCGGCCGCGGTATCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR CCA 90 bp | GTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTCTCGTCCAGCAGCGTTaGAGGCGGCAACGGCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: VSVKGKASQHPWLPSQLGLVQQR*RRQRRR Trigger: ACGCCGCCGTTGCCGCCTCCAACGCTGCTGGACGAG...ACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCTAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
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| CDS-3UTR CCA 90 bp | AACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGCTGCCGGATGGGCACTaGGAAGTGGCCCACGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: NDAVRVVSVKGKASQHPWLPDGH*EVAHAV Trigger: CACAGCGTGGGCCACTTCCCAGTGCCCATCCGGCAG...CCATGGATGCTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR GCA 90 bp | GTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTGTGGCCTTCAGGGGCTaGCGGATGGGCACTGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: VSVKGKASQHPWLPSQLGVAFRG*RMGTGK Trigger: CTTCCCAGTGCCCATCCGGCAGCCCCTGAAGGCCAC...ACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR GCA 90 bp | AACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGCGCTGCTACCACTGCTaGCGCTGCTGCTGCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: NDAVRVVSVKGKASQHPWRCYHC*RCCCCL Trigger: AAGGCAGCAGCAGCAGCGGCAGCAGTGGTAGCAGCG...CCATGGATGCTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR GCA 90 bp | AACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGCATTGGATAAAGGCATaGCGCTGCCGCTGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: NDAVRVVSVKGKASQHPWHWIKA*RCRCRR Trigger: GCGGCGGCAGCGGCAGCGGCATGCCTTTATCCAATG...CCATGGATGCTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR CCA 90 bp | AGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTAACCTCGGAAGACGGGGCTaGGGTGGCGGCAGATGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SVKGKASQHPWLPSQLGNLGRRG*GGGRWS Trigger: TGACCATCTGCCGCCACCCCAGCCCCGTCTTCCGAG...GTTACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR CCA 90 bp | CGATACCGCGGCCGCGGGTTTGGGAACGCCGCAGTATCTCAGGCAGAGAGTAGGTTTGAGGGGAAATACTaGGTACTGGGGCTCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: RYRGRGFGNAAVSQAESRFEGKY*VLGLLL Trigger: CAGGAGGAGCCCCAGTACCCAGTATTTCCCCTCAAA...CCTACTCTCTGCCTGAGATACTGCGGCGTTCCCAAACCCGCGGCCGCGGTATCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR CCA 90 bp | TCCACTGAAAACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGTCAGGGGCTGCCGGATaGGCACTGGGAAGTGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: STENDAVRVVSVKGKASQSGAAG*ALGSGP Trigger: TGGGCCACTTCCCAGTGCCCATCCGGCAGCCCCTGA...CTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTTTTCAGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR GCA 90 bp | GTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTCGCTGCTACCACTGCTaGCGCTGCTGCTGCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: VSVKGKASQHPWLPSQLGRCYHC*RCCCCL Trigger: AAGGCAGCAGCAGCAGCGGCAGCAGTGGTAGCAGCG...ACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCTAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR TCA 90 bp | AACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGCCTCAGTGTGCTGAGTaGAGACAGAGGCTTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: NDAVRVVSVKGKASQHPWPQCAE*RQRLGR Trigger: CCTCCCAAGCCTCTGTCTTCACTCAGCACACTGAGG...CCATGGATGCTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR GCA 90 bp | CGATACCGCGGCCGCGGGTTTGGGAACGCCGCAGTATCTCAGGCAGAGAGTAGGACATGTCTACACCACTaGAAAGGACTCGGGGATTTC | + |
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Preference number: 4 (lower is better) Translates to: RYRGRGFGNAAVSQAESRTCLHH*KGLGDF Trigger: GAAATCCCCGAGTCCTTTGCAGTGGTGTAGACATGT...CCTACTCTCTGCCTGAGATACTGCGGCGTTCCCAAACCCGCGGCCGCGGTATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
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| CDS-3UTR CCA 90 bp | AACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGAGCGCAGAGAGCGTCTaGCTGCTTCCATCTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: NDAVRVVSVKGKASQHPWSAESV*LLPSQE Trigger: CTCCTGAGATGGAAGCAGCCAGACGCTCTCTGCGCT...CCATGGATGCTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
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| CDS-3UTR TCA 90 bp | GTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTCCTCAGTGTGCTGAGTaGAGACAGAGGCTTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VSVKGKASQHPWLPSQLGPQCAE*RQRLGR Trigger: CCTCCCAAGCCTCTGTCTTCACTCAGCACACTGAGG...ACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR GCA 90 bp | GTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTTACTGGGGCTCCTCCTaGAATCCCGGATGCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: VSVKGKASQHPWLPSQLGYWGSS*NPGCWR Trigger: TCTCCAGCATCCGGGATTGCAGGAGGAGCCCCAGTA...ACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR GCA 90 bp | AGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTAACTACTGGGGCTCCTCCTaGAATCCCGGATGCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SVKGKASQHPWLPSQLGNYWGSS*NPGCWR Trigger: TCTCCAGCATCCGGGATTGCAGGAGGAGCCCCAGTA...GTTACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR GCA 90 bp | AACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGCAGGCTGTGCAATCTTaGTCCGAGGCAGGTTACTCC | + |
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Preference number: 4 (lower is better) Translates to: NDAVRVVSVKGKASQHPWQAVQS*SEAGYS Trigger: GGAGTAACCTGCCTCGGAGCAAGATTGCACAGCCTG...CCATGGATGCTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR GCA 90 bp | TCCACTGAAAACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGAGAGGCTTGGGAGGCTaGAGGAAGCTTCTGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: STENDAVRVVSVKGKASQRGLGG*RKLLTG Trigger: GCCTGTCAGAAGCTTCCTGCAGCCTCCCAAGCCTCT...CTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTTTTCAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR CCA 90 bp | GTTCTACAAAAACTTCCTAGATCTAAGGTAACGATACCGCGGCCGCGGGTTTGGCTGCCGGATGGGCACTaGGAAGTGGCCCACGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VLQKLPRSKVTIPRPRVWLPDGH*EVAHAV Trigger: CACAGCGTGGGCCACTTCCCAGTGCCCATCCGGCAG...CCAAACCCGCGGCCGCGGTATCGTTACCTTAGATCTAGGAAGTTTTTGTAGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR TCA 90 bp | GTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTGCTGGAGAAAGTCTGTaGGTGGGGGATCCCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VSVKGKASQHPWLPSQLGAGESL*VGDPSL Trigger: CAAAGAGGGATCCCCCACTCACAGACTTTCTCCAGC...ACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCTAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR TCA 90 bp | AGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTAACGCTGGAGAAAGTCTGTaGGTGGGGGATCCCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SVKGKASQHPWLPSQLGNAGESL*VGDPSL Trigger: CAAAGAGGGATCCCCCACTCACAGACTTTCTCCAGC...GTTACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR TCA 90 bp | AGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTAACCATCCCTCAGTGTGCTaGGTGAAGACAGAGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SVKGKASQHPWLPSQLGNHPSVC*VKTEAW Trigger: CCAAGCCTCTGTCTTCACTCAGCACACTGAGGGATG...GTTACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR GCA 90 bp | TCCACTGAAAACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGCAGAGAGCGTCTGGCTaGTTCCATCTCAGGAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: STENDAVRVVSVKGKASQQRASG*FHLRSW Trigger: CCAACTCCTGAGATGGAAGCAGCCAGACGCTCTCTG...CTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTTTTCAGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
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| CDS-3UTR GCA 90 bp | GTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTCAGGCTGTGCAATCTTaGTCCGAGGCAGGTTACTCC | + |
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Preference number: 4 (lower is better) Translates to: VSVKGKASQHPWLPSQLGQAVQS*SEAGYS Trigger: GGAGTAACCTGCCTCGGAGCAAGATTGCACAGCCTG...ACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR TCA 90 bp | AGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTAACCTGGAGTCAAAGCTCTaGCTGCTCCTCACTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SVKGKASQHPWLPSQLGNLESKL*LLLTVT Trigger: TGTGACAGTGAGGAGCAGTCAGAGCTTTGACTCCAG...GTTACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | AGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTAACATTTGGTTGCTGGTCTaGAGTCTGGGCTTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVKGKASQHPWLPSQLGNIWLLV*SLGLRW Trigger: CCACCTCAAGCCCAGACTGCAGACCAGCAACCAAAT...GTTACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | TCCACTGAAAACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGTGGGGGATCCCTCTTTaGAAAGGTGAACACCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: STENDAVRVVSVKGKASQWGIPL*KGEHLG Trigger: TCCGAGGTGTTCACCTTTCCAAAGAGGGATCCCCCA...CTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTTTTCAGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | AGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTAACTGCAATCCCGGATGCTaGAGAAAGTCTGTGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVKGKASQHPWLPSQLGNCNPGC*RKSVSG Trigger: CCCACTCACAGACTTTCTCCAGCATCCGGGATTGCA...GTTACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | AGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTAACTTTGAGGGGAAATACTaGGTACTGGGGCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVKGKASQHPWLPSQLGNFEGKY*VLGLLL Trigger: CAGGAGGAGCCCCAGTACCCAGTATTTCCCCTCAAA...GTTACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | TCCACTGAAAACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGCAGCTCCATGCAAGCTaGAGTCAAAGCTCTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: STENDAVRVVSVKGKASQQLHAS*SQSSDC Trigger: GCAGTCAGAGCTTTGACTCCAGCTTGCATGGAGCTG...CTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTTTTCAGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | AGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTAACCAGCTCCATGCAAGCTaGAGTCAAAGCTCTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVKGKASQHPWLPSQLGNQLHAS*SQSSDC Trigger: GCAGTCAGAGCTTTGACTCCAGCTTGCATGGAGCTG...GTTACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR TCA 90 bp | CTACAAAAACTTCCTAGATCTAAGGTAACGATACCGCGGCCGCGGGTTTGGGAACCCTCTTTGGAAAGGTaGACACCTCGGAAGACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQKLPRSKVTIPRPRVWEPSLER*TPRKTG Trigger: CCCCGTCTTCCGAGGTGTTCACCTTTCCAAAGAGGG...TTCCCAAACCCGCGGCCGCGGTATCGTTACCTTAGATCTAGGAAGTTTTTGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | GTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTTTGGTCCTATTTGGTTaGTGGTCTGCAGTCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSVKGKASQHPWLPSQLGLVLFG*WSAVWA Trigger: AGCCCAGACTGCAGACCAGCAACCAAATAGGACCAA...ACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | AGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTAACAGTCAAAGCTCTGACTaGTCCTCACTGTCACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVKGKASQHPWLPSQLGNSQSSD*SSLSQE Trigger: CTCCTGTGACAGTGAGGAGCAGTCAGAGCTTTGACT...GTTACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | TCCACTGAAAACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGAGTCAAAGCTCTGACTaGTCCTCACTGTCACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: STENDAVRVVSVKGKASQSQSSD*SSLSQE Trigger: CTCCTGTGACAGTGAGGAGCAGTCAGAGCTTTGACT...CTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTTTTCAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTACAAAAACTTCCTAGATCTAAGGTAACGATACCGCGGCCGCGGGTTTGGTGCCGCTGCTGCTGCTaGCTTGAACAGTTGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLQKLPRSKVTIPRPRVWCRCCC*LEQLGS Trigger: TGAGCCCAACTGTTCAAGGCAGCAGCAGCAGCGGCA...CCAAACCCGCGGCCGCGGTATCGTTACCTTAGATCTAGGAAGTTTTTGTAGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | CTACAAAAACTTCCTAGATCTAAGGTAACGATACCGCGGCCGCGGGTTTGGGAATACCACTGCTGCCGCTaGTGCTGCTGCCTTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LQKLPRSKVTIPRPRVWEYHCCR*CCCLEQ Trigger: CTGTTCAAGGCAGCAGCAGCAGCGGCAGCAGTGGTA...TTCCCAAACCCGCGGCCGCGGTATCGTTACCTTAGATCTAGGAAGTTTTTGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | TCCACTGAAAACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGCACTGGAACTGTTTCTaGACACTGATGCTGACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: STENDAVRVVSVKGKASQHWNCF*TLMLTW Trigger: CCACGTCAGCATCAGTGTCCAGAAACAGTTCCAGTG...CTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTTTTCAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTACAAAAACTTCCTAGATCTAAGGTAACGATACCGCGGCCGCGGGTTTGGGCTGGAGAAAGTCTGTaGGTGGGGGATCCCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLQKLPRSKVTIPRPRVWAGESL*VGDPSL Trigger: CAAAGAGGGATCCCCCACTCACAGACTTTCTCCAGC...CCAAACCCGCGGCCGCGGTATCGTTACCTTAGATCTAGGAAGTTTTTGTAGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | GGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCCAGCCGGCTGCAGGCTaGAGAGCAGGGAGGGCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GTFKNLIWQSIIDTPQSLQPAAG*RAGRAR Trigger: CCGCGCCCTCCCTGCTCTGCAGCCTGCAGCCGGCTG...GAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | AGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACGGAGCAGTGGCGCGTCAGCCGGCTaGAGGCTGCAGAGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SIIDTPQSLSKSIQIRSSGASAG*RLQSRE Trigger: CTCCCTGCTCTGCAGCCTGCAGCCGGCTGACGCGCC...ACTGCTCCGTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | GTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTACATGTCTACACCACTaGAAAGGACTCGGGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSVKGKASQHPWLPSQLGTCLHH*KGLGDF Trigger: GAAATCCCCGAGTCCTTTGCAGTGGTGTAGACATGT...ACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | AGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACGGAGCAGTGCATGCCGCTGCCGCTaGCGCCGCTGCTACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIIDTPQSLSKSIQIRSSACRCR*RRCYHC Trigger: GCAGTGGTAGCAGCGGCGGCAGCGGCAGCGGCATGC...ACTGCTCCGTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | AACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGATAAGGGCTGAGTCTTaGAACAGGGCTATAAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NDAVRVVSVKGKASQHPWIRAES*NRAIRE Trigger: TTCCCTTATAGCCCTGTTGCAAGACTCAGCCCTTAT...CCATGGATGCTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | AGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTAACGAGAAAGTCTGTGAGTaGGGGATCCCTCTTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVKGKASQHPWLPSQLGNEKVCE*GIPLWK Trigger: TTTCCAAAGAGGGATCCCCCACTCACAGACTTTCTC...GTTACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | TCCACTGAAAACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGGAGAAAGTCTGTGAGTaGGGGATCCCTCTTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: STENDAVRVVSVKGKASQEKVCE*GIPLWK Trigger: TTTCCAAAGAGGGATCCCCCACTCACAGACTTTCTC...CTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTTTTCAGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | CTACAAAAACTTCCTAGATCTAAGGTAACGATACCGCGGCCGCGGGTTTGGGAAGGAAATACTGGGTACTaGGGCTCCTCCTGCAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LQKLPRSKVTIPRPRVWEGNTGY*GSSCNP Trigger: GGGATTGCAGGAGGAGCCCCAGTACCCAGTATTTCC...TTCCCAAACCCGCGGCCGCGGTATCGTTACCTTAGATCTAGGAAGTTTTTGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | CTACAAAAACTTCCTAGATCTAAGGTAACGATACCGCGGCCGCGGGTTTGGGAAGCTGCCTTGAACAGTTaGGCTCACATAGGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQKLPRSKVTIPRPRVWEAALNS*AHIGCG Trigger: GCCACAGCCTATGTGAGCCCAACTGTTCAAGGCAGC...TTCCCAAACCCGCGGCCGCGGTATCGTTACCTTAGATCTAGGAAGTTTTTGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTACAAAAACTTCCTAGATCTAAGGTAACGATACCGCGGCCGCGGGTTTGGCTGGAGTCAAAGCTCTaGCTGCTCCTCACTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VLQKLPRSKVTIPRPRVWLESKL*LLLTVT Trigger: TGTGACAGTGAGGAGCAGTCAGAGCTTTGACTCCAG...CCAAACCCGCGGCCGCGGTATCGTTACCTTAGATCTAGGAAGTTTTTGTAGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | AGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACGGAGCAGTTGGGCAAGCAGTAGGTaGCCGGGAACGCGGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIIDTPQSLSKSIQIRSSWASSR*PGTRGP Trigger: TGGGCCCCGCGTTCCCGGGCACCTACTGCTTGCCCA...ACTGCTCCGTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069443.14 |
||
| CDS-3UTR GCA 90 bp | GTTCTACAAAAACTTCCTAGATCTAAGGTAACGATACCGCGGCCGCGGGTTTGGATTTGGTTGCTGGTCTaGAGTCTGGGCTTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLQKLPRSKVTIPRPRVWIWLLV*SLGLRW Trigger: CCACCTCAAGCCCAGACTGCAGACCAGCAACCAAAT...CCAAACCCGCGGCCGCGGTATCGTTACCTTAGATCTAGGAAGTTTTTGTAGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | AGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACGGAGCAGTCGCCGCTGCTACCACTaGTGCCGCTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIIDTPQSLSKSIQIRSSRRCYH*CRCCCC Trigger: GCAGCAGCAGCAGCGGCAGCAGTGGTAGCAGCGGCG...ACTGCTCCGTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGTAACGGCATGCCGCTGCCGCTaGCGCCGCTGCTACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVFRYGAVLQKLPRSKVTACRCR*RRCYHC Trigger: GCAGTGGTAGCAGCGGCGGCAGCGGCAGCGGCATGC...CGTTACCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | GAACAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAAGGGAGGGCGCGGGGCTaGGCAAGCAGTAGGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: EQGTFKNLIWQSIIDTPQGRARG*ASSRCP Trigger: CGGGCACCTACTGCTTGCCCAGCCCCGCGCCCTCCC...TTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | GTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTAACTCAGGGATACACTaGAACTGTTTCTGGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: VSVKGKASQHPWLPSQLGNSGIH*NCFWTL Trigger: CAGTGTCCAGAAACAGTTCCAGTGTATCCCTGAGTT...ACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | CTACAAAAACTTCCTAGATCTAAGGTAACGATACCGCGGCCGCGGGTTTGGGAATTTGAGGGGAAATACTaGGTACTGGGGCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQKLPRSKVTIPRPRVWEFEGKY*VLGLLL Trigger: CAGGAGGAGCCCCAGTACCCAGTATTTCCCCTCAAA...TTCCCAAACCCGCGGCCGCGGTATCGTTACCTTAGATCTAGGAAGTTTTTGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | CTACAAAAACTTCCTAGATCTAAGGTAACGATACCGCGGCCGCGGGTTTGGGAACAGCTCCATGCAAGCTaGAGTCAAAGCTCTGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQKLPRSKVTIPRPRVWEQLHAS*SQSSDC Trigger: GCAGTCAGAGCTTTGACTCCAGCTTGCATGGAGCTG...TTCCCAAACCCGCGGCCGCGGTATCGTTACCTTAGATCTAGGAAGTTTTTGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | AGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACGGAGCAGTGTGGCCTTCAGGGGCTaGCGGATGGGCACTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SIIDTPQSLSKSIQIRSSVAFRG*RMGTGK Trigger: CTTCCCAGTGCCCATCCGGCAGCCCCTGAAGGCCAC...ACTGCTCCGTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGTAACGCGCCGCTGCTACCACTaGTGCCGCTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVFRYGAVLQKLPRSKVTRRCYH*CRCCCC Trigger: GCAGCAGCAGCAGCGGCAGCAGTGGTAGCAGCGGCG...CGTTACCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | ACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCCGCCGCTGCTACCACTaGTGCCGCTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSYGKALLIRLNLSQKVFRRCYH*CRCCCC Trigger: GCAGCAGCAGCAGCGGCAGCAGTGGTAGCAGCGGCG...GAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | GGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCAGCCCGCCGCCGGCTTaGAGTAGACGAAGGGCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GTFKNLIWQSIIDTPQSLSPPPA*SRRRAR Trigger: ACGCGCCCTTCGTCTACTCCAAGCCGGCGGCGGGCT...GAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | AGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTAACGTAGCTTATCTCCATTaGTCCTATTTGGTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVKGKASQHPWLPSQLGNVAYLH*SYLVAG Trigger: ACCAGCAACCAAATAGGACCAATGGAGATAAGCTAC...GTTACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | TCCACTGAAAACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGGTAGCTTATCTCCATTaGTCCTATTTGGTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: STENDAVRVVSVKGKASQVAYLH*SYLVAG Trigger: ACCAGCAACCAAATAGGACCAATGGAGATAAGCTAC...CTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTTTTCAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR TCA 90 bp | CTACAAAAACTTCCTAGATCTAAGGTAACGATACCGCGGCCGCGGGTTTGGGAAAGACGAGCCATGATCTaGACATCAGTAAGGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQKLPRSKVTIPRPRVWERRAMI*TSVRSC Trigger: ACAGGACCTTACTGATGTTCAGATCATGGCTCGTCT...TTCCCAAACCCGCGGCCGCGGTATCGTTACCTTAGATCTAGGAAGTTTTTGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | TATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACAGCCCGCCGCCGGCTTaGAGTAGACGAAGGGCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: YGKALLIRLNLSQKVFRYSPPPA*SRRRAR Trigger: ACGCGCCCTTCGTCTACTCCAAGCCGGCGGCGGGCT...GTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGTAACGCTCGGAAGACGGGGCTaGGGTGGCGGCAGATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KVFRYGAVLQKLPRSKVTLGRRG*GGGRWS Trigger: TGACCATCTGCCGCCACCCCAGCCCCGTCTTCCGAG...CGTTACCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATGGTGTGTTTTTGCTGATCTGCCGGATGGGCACTaGGAAGTGGCCCACGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLVQRKIMSQIVWCVFADLPDGH*EVAHAV Trigger: CACAGCGTGGGCCACTTCCCAGTGCCCATCCGGCAG...ATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGTAACGTCAGGGGCTGCCGGATaGGCACTGGGAAGTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KVFRYGAVLQKLPRSKVTSGAAG*ALGSGP Trigger: TGGGCCACTTCCCAGTGCCCATCCGGCAGCCCCTGA...CGTTACCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | GGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAGGGGCTGCCGGATaGGCACTGGGAAGTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTFKNLIWQSIIDTPQSLSGAAG*ALGSGP Trigger: TGGGCCACTTCCCAGTGCCCATCCGGCAGCCCCTGA...GAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | GTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTGTGGCCTTCAGGGGCTaGCGGATGGGCACTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLLKTSYGKALLIRLNLSVAFRG*RMGTGK Trigger: CTTCCCAGTGCCCATCCGGCAGCCCCTGAAGGCCAC...AGAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | AGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACGGAGCAGTTGCTGCCGCTGCTGCTaGTGCCTTGAACAGTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SIIDTPQSLSKSIQIRSSCCRCC*CLEQLG Trigger: GCCCAACTGTTCAAGGCAGCAGCAGCAGCGGCAGCA...ACTGCTCCGTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGTAACGCGCTGCTACCACTGCTaGCGCTGCTGCTGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KVFRYGAVLQKLPRSKVTRCYHC*RCCCCL Trigger: AAGGCAGCAGCAGCAGCGGCAGCAGTGGTAGCAGCG...CGTTACCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGTAACGCATTGGATAAAGGCATaGCGCTGCCGCTGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KVFRYGAVLQKLPRSKVTHWIKA*RCRCRR Trigger: GCGGCGGCAGCGGCAGCGGCATGCCTTTATCCAATG...CGTTACCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATGGTGTGTTTTTGCTGATACTCGGAAGACGGGGCTaGGGTGGCGGCAGATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSFNVKLCLKSYGVFLLILGRRG*GGGRWS Trigger: TGACCATCTGCCGCCACCCCAGCCCCGTCTTCCGAG...TATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 |
||
| CDS-3UTR TCA 90 bp | AGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACGGAGCAGTAACCTTGCTCCAGTCTaGAGCGCAGAGAGCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIIDTPQSLSKSIQIRSSNLAPV*SAESVW Trigger: CCAGACGCTCTCTGCGCTTCAGACTGGAGCAAGGTT...ACTGCTCCGTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069443.14 |
||
| CDS-3UTR GCA 90 bp | GTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCATTGGATAAAGGCATaGCGCTGCCGCTGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VLLKTSYGKALLIRLNLSHWIKA*RCRCRR Trigger: GCGGCGGCAGCGGCAGCGGCATGCCTTTATCCAATG...AGAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGTAACGCACGCAAGGAGACACTaGCCAGGCTCCAGGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: KVFRYGAVLQKLPRSKVTHARRH*PGSRRQ Trigger: CTGTCTCCTGGAGCCTGGCCAGTGTCTCCTTGCGTG...CGTTACCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159456.2 |
||
| CDS-3UTR TCA 90 bp | GTGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATGGTGTGTTTTTGCTGATCCCTCTTTGGAAAGGTaGACACCTCGGAAGACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLVQRKIMSQIVWCVFADPSLER*TPRKTG Trigger: CCCCGTCTTCCGAGGTGTTCACCTTTCCAAAGAGGG...ATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 |
||
| CDS-3UTR TCA 90 bp | CTCAAAAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGCCTCAGTGTGCTGAGTaGAGACAGAGGCTTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKKYSDTEQFYKNFLDLRPQCAE*RQRLGR Trigger: CCTCCCAAGCCTCTGTCTTCACTCAGCACACTGAGG...CCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTTTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR TCA 90 bp | TATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACTCGCTTGCTCCAGTCTaGAGCGCAGAGAGCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YGKALLIRLNLSQKVFRYSLAPV*SAESVW Trigger: CCAGACGCTCTCTGCGCTTCAGACTGGAGCAAGCGA...GTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | GAACAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAACGCAGCTGCTCGTTCTaGTTCTCCAGCTTGCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: EQGTFKNLIWQSIIDTPQRSCSF*FSSLRT Trigger: GGTGCGCAAGCTGGAGAAGCAGAACGAGCAGCTGCG...TTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069443.14 |
||
| CDS-3UTR GCA 90 bp | GTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTTGCTGCCGCTGCTGCTaGTGCCTTGAACAGTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLLKTSYGKALLIRLNLSCCRCC*CLEQLG Trigger: GCCCAACTGTTCAAGGCAGCAGCAGCAGCGGCAGCA...AGAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | CTCAAAAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGTACCACTGCTGCCGCTaGTGCTGCTGCCTTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LKKYSDTEQFYKNFLDLRYHCCR*CCCLEQ Trigger: CTGTTCAAGGCAGCAGCAGCAGCGGCAGCAGTGGTA...CCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTTTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | CTCAAAAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGAGAGGCTTGGGAGGCTaGAGGAAGCTTCTGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKKYSDTEQFYKNFLDLRRGLGG*RKLLTG Trigger: GCCTGTCAGAAGCTTCCTGCAGCCTCCCAAGCCTCT...CCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTTTTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCCCTCTTTGGAAAGGTaGACACCTCGGAAGACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGTFKNLIWQSIIDTPQSPSLER*TPRKTG Trigger: CCCCGTCTTCCGAGGTGTTCACCTTTCCAAAGAGGG...AGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | GAACAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATACTGGGGCTCCTCCTaGAATCCCGGATGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EQGTFKNLIWQSIIDTPQYWGSS*NPGCWR Trigger: TCTCCAGCATCCGGGATTGCAGGAGGAGCCCCAGTA...TTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | GTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTTGCCGCTGCTGCTGCTaGCTTGAACAGTTGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLLKTSYGKALLIRLNLSCRCCC*LEQLGS Trigger: TGAGCCCAACTGTTCAAGGCAGCAGCAGCAGCGGCA...AGAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | GAACAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAACACTGCTGCCGCTGCTaGTGCTGCCTTGAACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EQGTFKNLIWQSIIDTPQHCCRC*CCLEQL Trigger: CAACTGTTCAAGGCAGCAGCAGCAGCGGCAGCAGTG...TTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCACTGCTGCCGCTGCTaGTGCTGCCTTGAACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGTFKNLIWQSIIDTPQSHCCRC*CCLEQL Trigger: CAACTGTTCAAGGCAGCAGCAGCAGCGGCAGCAGTG...AGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | GTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCACTGCTGCCGCTGCTaGTGCTGCCTTGAACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLLKTSYGKALLIRLNLSHCCRC*CCLEQL Trigger: CAACTGTTCAAGGCAGCAGCAGCAGCGGCAGCAGTG...AGAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | TATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACTACCACTGCTGCCGCTaGTGCTGCTGCCTTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: YGKALLIRLNLSQKVFRYYHCCR*CCCLEQ Trigger: CTGTTCAAGGCAGCAGCAGCAGCGGCAGCAGTGGTA...GTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | TATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACAGAGGCTTGGGAGGCTaGAGGAAGCTTCTGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YGKALLIRLNLSQKVFRYRGLGG*RKLLTG Trigger: GCCTGTCAGAAGCTTCCTGCAGCCTCCCAAGCCTCT...GTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGGGAAATACTGGGTACTaGGGCTCCTCCTGCAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LKKYSDTEQFYKNFLDLRGNTGY*GSSCNP Trigger: GGGATTGCAGGAGGAGCCCCAGTACCCAGTATTTCC...CCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTTTTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | GGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCGCTGCCTTGAACAGTTaGGCTCACATAGGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTFKNLIWQSIIDTPQSLAALNS*AHIGCG Trigger: GCCACAGCCTATGTGAGCCCAACTGTTCAAGGCAGC...GAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | GGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCGCAGGGATAGCATCTTaGGCCACGCAAGGAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: GTFKNLIWQSIIDTPQSLAGIAS*ATQGDT Trigger: AGTGTCTCCTTGCGTGGCCCAAGATGCTATCCCTGC...GAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159456.2 |
||
| CDS-3UTR TCA 90 bp | AAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGTAACGCTCACTGTCGATGGATaGCTGCGGACTAAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KVFRYGAVLQKLPRSKVTLTVDG*LRTKWR Trigger: TCTCCACTTAGTCCGCAGTCATCCATCGACAGTGAG...CGTTACCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR TCA 90 bp | CTCAAAAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGCTCACTGTCGATGGATaGCTGCGGACTAAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKKYSDTEQFYKNFLDLRLTVDG*LRTKWR Trigger: TCTCCACTTAGTCCGCAGTCATCCATCGACAGTGAG...CCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTTTTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATGGTGTGTTTTTGCTGATACATCCCTCAGTGTGCTaGGTGAAGACAGAGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSFNVKLCLKSYGVFLLIHPSVC*VKTEAW Trigger: CCAAGCCTCTGTCTTCACTCAGCACACTGAGGGATG...TATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 |
||
| CDS-3UTR GCA 90 bp | TATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACCAGAGAGCGTCTGGCTaGTTCCATCTCAGGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YGKALLIRLNLSQKVFRYQRASG*FHLRSW Trigger: CCAACTCCTGAGATGGAAGCAGCCAGACGCTCTCTG...GTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATGGTGTGTTTTTGCTGATATTTGGTTGCTGGTCTaGAGTCTGGGCTTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLVQRKIMSQIVWCVFADIWLLV*SLGLRW Trigger: CCACCTCAAGCCCAGACTGCAGACCAGCAACCAAAT...ATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 |
||
| CDS-3UTR GCA 90 bp | AGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACGGAGCAGTAGTCAAAGCTCTGACTaGTCCTCACTGTCACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SIIDTPQSLSKSIQIRSSSQSSD*SSLSQE Trigger: CTCCTGTGACAGTGAGGAGCAGTCAGAGCTTTGACT...ACTGCTCCGTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATGGTGTGTTTTTGCTGATACAGGCTGTGCAATCTTaGTCCGAGGCAGGTTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSFNVKLCLKSYGVFLLIQAVQS*SEAGYS Trigger: GGAGTAACCTGCCTCGGAGCAAGATTGCACAGCCTG...TATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAAAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGTGGGGGATCCCTCTTTaGAAAGGTGAACACCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKKYSDTEQFYKNFLDLRWGIPL*KGEHLG Trigger: TCCGAGGTGTTCACCTTTCCAAAGAGGGATCCCCCA...CCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTTTTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | CTCAAAAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGTGCAATCCCGGATGCTaGAGAAAGTCTGTGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKKYSDTEQFYKNFLDLRCNPGC*RKSVSG Trigger: CCCACTCACAGACTTTCTCCAGCATCCGGGATTGCA...CCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTTTTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | TATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACGGAAATACTGGGTACTaGGGCTCCTCCTGCAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: YGKALLIRLNLSQKVFRYGNTGY*GSSCNP Trigger: GGGATTGCAGGAGGAGCCCCAGTACCCAGTATTTCC...GTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTGCTGCCTTGAACAGTTaGGCTCACATAGGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGTFKNLIWQSIIDTPQSAALNS*AHIGCG Trigger: GCCACAGCCTATGTGAGCCCAACTGTTCAAGGCAGC...AGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR TCA 90 bp | GTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCTCACTGTCGATGGATaGCTGCGGACTAAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLLKTSYGKALLIRLNLSLTVDG*LRTKWR Trigger: TCTCCACTTAGTCCGCAGTCATCCATCGACAGTGAG...AGAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR TCA 90 bp | CAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTGGAGTCAAAGCTCTaGCTGCTCCTCACTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: QGTFKNLIWQSIIDTPQSLESKL*LLLTVT Trigger: TGTGACAGTGAGGAGCAGTCAGAGCTTTGACTCCAG...AGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | CTCAAAAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGTCCTGCAATCCCGGATaGTGGAGAAAGTCTGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKKYSDTEQFYKNFLDLRSCNPG*WRKSVS Trigger: ACTCACAGACTTTCTCCAGCATCCGGGATTGCAGGA...CCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTTTTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGTAACGTTGGTCCTATTTGGTTaGTGGTCTGCAGTCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVFRYGAVLQKLPRSKVTLVLFG*WSAVWA Trigger: AGCCCAGACTGCAGACCAGCAACCAAATAGGACCAA...CGTTACCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | GTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTTGGGGGATCCCTCTTTaGAAAGGTGAACACCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLLKTSYGKALLIRLNLSWGIPL*KGEHLG Trigger: TCCGAGGTGTTCACCTTTCCAAAGAGGGATCCCCCA...AGAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR CCA 90 bp | TGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATGGTGTGTTTTTGCTGATATGCAATCCCGGATGCTaGAGAAAGTCTGTGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSFNVKLCLKSYGVFLLICNPGC*RKSVSG Trigger: CCCACTCACAGACTTTCTCCAGCATCCGGGATTGCA...TATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 |
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| CDS-3UTR CCA 90 bp | GTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTAGTCTGGGCTTGAGGTaGGTAATACTGTGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLLKTSYGKALLIRLNLSSLGLR*VILWLL Trigger: CAGCAGCCACAGTATTACCCACCTCAAGCCCAGACT...AGAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR CCA 90 bp | TGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATGGTGTGTTTTTGCTGATAAGTCTGGGCTTGAGGTaGGTAATACTGTGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSFNVKLCLKSYGVFLLISLGLR*VILWLL Trigger: CAGCAGCCACAGTATTACCCACCTCAAGCCCAGACT...TATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 |
||
| CDS-3UTR CCA 90 bp | TATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACAGTCTGGGCTTGAGGTaGGTAATACTGTGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YGKALLIRLNLSQKVFRYSLGLR*VILWLL Trigger: CAGCAGCCACAGTATTACCCACCTCAAGCCCAGACT...GTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | AGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACGGAGCAGTTCCATTGGTCCTATTTaGTTGCTGGTCTGCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SIIDTPQSLSKSIQIRSSSIGPI*LLVCSL Trigger: CAGACTGCAGACCAGCAACCAAATAGGACCAATGGA...ACTGCTCCGTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR GCA 90 bp | AGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACGGAGCAGTCATACTCTTGATCACTaGATGTCCCCTTTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SIIDTPQSLSKSIQIRSSHTLDH*MSPFSL Trigger: CAGGGAAAAAGGGGACATGCAGTGATCAAGAGTATG...ACTGCTCCGTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTTCCTGCAATCCCGGATaGTGGAGAAAGTCTGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QGTFKNLIWQSIIDTPQSSCNPG*WRKSVS Trigger: ACTCACAGACTTTCTCCAGCATCCGGGATTGCAGGA...AGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR GCA 90 bp | GAACAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCCTGCAATCCCGGATaGTGGAGAAAGTCTGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EQGTFKNLIWQSIIDTPQSCNPG*WRKSVS Trigger: ACTCACAGACTTTCTCCAGCATCCGGGATTGCAGGA...TTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCACTGGAACTGTTTCTaGACACTGATGCTGACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGTFKNLIWQSIIDTPQSHWNCF*TLMLTW Trigger: CCACGTCAGCATCAGTGTCCAGAAACAGTTCCAGTG...AGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR CCA 90 bp | CTCAAAAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGGAGAAAGTCTGTGAGTaGGGGATCCCTCTTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKKYSDTEQFYKNFLDLREKVCE*GIPLWK Trigger: TTTCCAAAGAGGGATCCCCCACTCACAGACTTTCTC...CCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTTTTGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGTAACGTCCATTGGTCCTATTTaGTTGCTGGTCTGCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVFRYGAVLQKLPRSKVTSIGPI*LLVCSL Trigger: CAGACTGCAGACCAGCAACCAAATAGGACCAATGGA...CGTTACCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR TCA 90 bp | CTCAAAAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGCTGCTGGAAGTTATTTaGGGGGAAATACTGGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LKKYSDTEQFYKNFLDLRLLEVI*GEILGT Trigger: AGTACCCAGTATTTCCCCTCAAATAACTTCCAGCAG...CCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTTTTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR TCA 90 bp | GGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCCTGCTGGAAGTTATTTaGGGGGAAATACTGGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GTFKNLIWQSIIDTPQSLLLEVI*GEILGT Trigger: AGTACCCAGTATTTCCCCTCAAATAACTTCCAGCAG...GAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR TCA 90 bp | ACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCCTGCTGGAAGTTATTTaGGGGGAAATACTGGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: TSYGKALLIRLNLSQKVFLLEVI*GEILGT Trigger: AGTACCCAGTATTTCCCCTCAAATAACTTCCAGCAG...GAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTTCCATTGGTCCTATTTaGTTGCTGGTCTGCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGTFKNLIWQSIIDTPQSSIGPI*LLVCSL Trigger: CAGACTGCAGACCAGCAACCAAATAGGACCAATGGA...AGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR GCA 90 bp | GTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCATACTCTTGATCACTaGATGTCCCCTTTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLLKTSYGKALLIRLNLSHTLDH*MSPFSL Trigger: CAGGGAAAAAGGGGACATGCAGTGATCAAGAGTATG...AGAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CCA 90 bp | TATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACAACTCAGGGATACACTaGAACTGTTTCTGGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: YGKALLIRLNLSQKVFRYNSGIH*NCFWTL Trigger: CAGTGTCCAGAAACAGTTCCAGTGTATCCCTGAGTT...GTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR CCA 90 bp | ACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCGTAGCTTATCTCCATTaGTCCTATTTGGTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSYGKALLIRLNLSQKVFVAYLH*SYLVAG Trigger: ACCAGCAACCAAATAGGACCAATGGAGATAAGCTAC...GAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR CCA 90 bp | GGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTGCAAAGCTTTAAATTaGTGTTCCAAATGTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTFKNLIWQSIIDTPQSLCKALN*CSKCGR Trigger: TCTGCCACATTTGGAACACCAATTTAAAGCTTTGCA...GAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159456.2 |
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| CDS-3UTR TCA 90 bp | TGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATGGTGTGTTTTTGCTGATAAGGTATAACCTAAAATaGACTCTCCTTTGCAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSFNVKLCLKSYGVFLLIRYNLK*TLLCKA Trigger: AGCTTTGCAAAGGAGAGTTCATTTTAGGTTATACCT...TATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159456.2 |
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| CDS CCA 90 bp | GGCCAAGCTCTCCAGGTCCAGCGGCTCCACCTCGTCCAGCAGCGTTaGAGGCGGCAACGGCGGCGTGGCGGCTTCCCCCGGCGGGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GQALQVQRLHLVQQR*RRQRRRGGFPRRGP Trigger: GGGACCCCGCCGGGGGAAGCCGCCACGCCGCCGTTGCCGCCTCCAACGCTGCTGGACGAGGTGGAGCCGCTGGACCTGGAGAGCTTGGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
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| CDS GCA 90 bp | CCGCCGGCTTGGAGTAGACGAAGGGCGCGTCAGCCGGCTGCAGGCTaGAGAGCAGGGAGGGCGCGGGGCTGGGCAAGCAGTAGGTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PPAWSRRRARQPAAG*RAGRARGWASSRCP Trigger: CGGGCACCTACTGCTTGCCCAGCCCCGCGCCCTCCCTGCTCTGCAGCCTGCAGCCGGCTGACGCGCCCTTCGTCTACTCCAAGCCGGCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
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| CDS CCA 90 bp | CCGGTTCCGGGCTGCCACCTCCGCCGAAGAAGCCCGCCGCCGGCTTaGAGTAGACGAAGGGCGCGTCAGCCGGCTGCAGGCTGCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PVPGCHLRRRSPPPA*SRRRARQPAAGCRA Trigger: TGCTCTGCAGCCTGCAGCCGGCTGACGCGCCCTTCGTCTACTCCAAGCCGGCGGCGGGCTTCTTCGGCGGAGGTGGCAGCCCGGAACCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
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| CDS GCA 90 bp | CGCTGCCGCTGCCGCCGCTGCTACCACTGCTGCCGCTGCTGCTGCTaGCTTGAACAGTTGGGCTCACATAGGCTGTGGCCTTCAGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RCRCRRCYHCCRCCC*LEQLGSHRLWPSGA Trigger: AGCCCCTGAAGGCCACAGCCTATGTGAGCCCAACTGTTCAAGGCAGCAGCAGCAGCGGCAGCAGTGGTAGCAGCGGCGGCAGCGGCAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS GCA 90 bp | TGCCGCTGCCGCTGCCGCCGCTGCTACCACTGCTGCCGCTGCTGCTaGTGCCTTGAACAGTTGGGCTCACATAGGCTGTGGCCTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CRCRCRRCYHCCRCC*CLEQLGSHRLWPSG Trigger: CCCTGAAGGCCACAGCCTATGTGAGCCCAACTGTTCAAGGCAGCAGCAGCAGCGGCAGCAGTGGTAGCAGCGGCGGCAGCGGCAGCGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS GCA 90 bp | GCATGCCGCTGCCGCTGCCGCCGCTGCTACCACTGCTGCCGCTGCTaGTGCTGCCTTGAACAGTTGGGCTCACATAGGCTGTGGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ACRCRCRRCYHCCRC*CCLEQLGSHRLWPS Trigger: TGAAGGCCACAGCCTATGTGAGCCCAACTGTTCAAGGCAGCAGCAGCAGCGGCAGCAGTGGTAGCAGCGGCGGCAGCGGCAGCGGCATGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS GCA 90 bp | AAGGCATGCCGCTGCCGCTGCCGCCGCTGCTACCACTGCTGCCGCTaGTGCTGCTGCCTTGAACAGTTGGGCTCACATAGGCTGTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KACRCRCRRCYHCCR*CCCLEQLGSHRLWP Trigger: AGGCCACAGCCTATGTGAGCCCAACTGTTCAAGGCAGCAGCAGCAGCGGCAGCAGTGGTAGCAGCGGCGGCAGCGGCAGCGGCATGCCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR CAA 90 bp | CGATACCGCGGCCGCGGGTTTGGGAACGCCGCAGTATCTCAGGCAGAGAGTAGGACAGGAGAGCTGAGGTaGCTGCTGGCCGCAGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RYRGRGFGNAAVSQAESRTGELR*LLAAAV Trigger: CACCGCTGCGGCCAGCAGCAACCTCAGCTCTCCTGT...CCTACTCTCTGCCTGAGATACTGCGGCGTTCCCAAACCCGCGGCCGCGGTATCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS GCA 90 bp | TGGATAAAGGCATGCCGCTGCCGCTGCCGCCGCTGCTACCACTGCTaGCGCTGCTGCTGCTGCCTTGAACAGTTGGGCTCACATAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WIKACRCRCRRCYHC*RCCCCLEQLGSHRL Trigger: CAGCCTATGTGAGCCCAACTGTTCAAGGCAGCAGCAGCAGCGGCAGCAGTGGTAGCAGCGGCGGCAGCGGCAGCGGCATGCCTTTATCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS GCA 90 bp | GGATGCCCGTGGTGGAATATAACTGCGTGCCATTGGATAAAGGCATaGCGCTGCCGCTGCCGCCGCTGCTACCACTGCTGCCGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GCPWWNITACHWIKA*RCRCRRCYHCCRCC Trigger: GCAGCAGCGGCAGCAGTGGTAGCAGCGGCGGCAGCGGCAGCGGCATGCCTTTATCCAATGGCACGCAGTTATATTCCACCACGGGCATCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS-3UTR CAA 90 bp | TCCACTGAAAACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGCCTCGTCCAGCAGCGTaGGAGGCGGCAACGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: STENDAVRVVSVKGKASQPRPAA*EAATAA Trigger: CGCCGCCGTTGCCGCCTCCAACGCTGCTGGACGAGG...CTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTTTTCAGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
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| CDS GCA 90 bp | GCCGCAGCTTTGTTCGGAGTAGGGATGCCCGTGGTGGAATATAACTaGGTGCCATTGGATAAAGGCATGCCGCTGCCGCTGCCGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AAALFGVGMPVVEYN*VPLDKGMPLPLPPL Trigger: CAGCGGCGGCAGCGGCAGCGGCATGCCTTTATCCAATGGCACGCAGTTATATTCCACCACGGGCATCCCTACTCCGAACAAAGCTGCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS CCA 90 bp | TGGGGGATCCCTCTTTGGAAAGGTGAACACCTCGGAAGACGGGGCTaGGGTGGCGGCAGATGGTCAAACTCTTCCTCGTCCTCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WGIPLWKGEHLGRRG*GGGRWSNSSSSSRL Trigger: CAGCCTGGAGGACGAGGAAGAGTTTGACCATCTGCCGCCACCCCAGCCCCGTCTTCCGAGGTGTTCACCTTTCCAAAGAGGGATCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 ENSMUST00000162818.8 |
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| CDS-3UTR CAA 90 bp | CGATACCGCGGCCGCGGGTTTGGGAACGCCGCAGTATCTCAGGCAGAGAGTAGGGCTGCTGCTGCTGCCTaGAACAGTTGGGCTCACATA | + |
|
Preference number: 5 (lower is better) Translates to: RYRGRGFGNAAVSQAESRAAAAA*NSWAHI Trigger: TATGTGAGCCCAACTGTTCAAGGCAGCAGCAGCAGC...CCTACTCTCTGCCTGAGATACTGCGGCGTTCCCAAACCCGCGGCCGCGGTATCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS TCA 90 bp | TGGGAAGTGGCCCACGCTGTGAACTCTGTGCTGAATCTGTCCTGGTaGCGGGATGCAGGACGGTACCCGAGAAACCCCACTTCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WEVAHAVNSVLNLSW*RDAGRYPRNPTSSS Trigger: GGAGCTGGAAGTGGGGTTTCTCGGGTACCGTCCTGCATCCCGTCACCAGGACAGATTCAGCACAGAGTTCACAGCGTGGGCCACTTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS GCA 90 bp | GGCCCACGCTGTGAACTCTGTGCTGAATCTGTCCTGGTGACGGGATaGAGGACGGTACCCGAGAAACCCCACTTCCAGCTCCATGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPRCELCAESVLVTG*RTVPEKPHFQLHAS Trigger: GCTTGCATGGAGCTGGAAGTGGGGTTTCTCGGGTACCGTCCTGCATCCCGTCACCAGGACAGATTCAGCACAGAGTTCACAGCGTGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS CCA 90 bp | GAACAGTTGGGCTCACATAGGCTGTGGCCTTCAGGGGCTGCCGGATaGGCACTGGGAAGTGGCCCACGCTGTGAACTCTGTGCTGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: EQLGSHRLWPSGAAG*ALGSGPRCELCAES Trigger: AGATTCAGCACAGAGTTCACAGCGTGGGCCACTTCCCAGTGCCCATCCGGCAGCCCCTGAAGGCCACAGCCTATGTGAGCCCAACTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS TCA 90 bp | CTGTGCAATCTTGCTCCGAGGCAGGTTACTCCCATTTATTGCCAGTaGAGGTCTCGGAAGGGCGCTGCGACCCAGGATCCCAGAAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LCNLAPRQVTPIYCQ*RSRKGAATQDPRSR Trigger: GCGGCTTCTGGGATCCTGGGTCGCAGCGCCCTTCCGAGACCTTCACTGGCAATAAATGGGAGTAACCTGCCTCGGAGCAAGATTGCACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | CGATACCGCGGCCGCGGGTTTGGGAACGCCGCAGTATCTCAGGCAGAGAGTAGGTATAACTGCGTGCCATaGGATAAAGGCATGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RYRGRGFGNAAVSQAESRYNCVP*DKGMPL Trigger: CAGCGGCATGCCTTTATCCAATGGCACGCAGTTATA...CCTACTCTCTGCCTGAGATACTGCGGCGTTCCCAAACCCGCGGCCGCGGTATCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS TCA 90 bp | CGAGAAACCCCACTTCCAGCTCCATGCAAGCTGGAGTCAAAGCTCTaGCTGCTCCTCACTGTCACAGGAGAGCTGAGGTTGCTGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RETPLPAPCKLESKL*LLLTVTGELRLLLA Trigger: GGCCAGCAGCAACCTCAGCTCTCCTGTGACAGTGAGGAGCAGTCAGAGCTTTGACTCCAGCTTGCATGGAGCTGGAAGTGGGGTTTCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | CGATACCGCGGCCGCGGGTTTGGGAACGCCGCAGTATCTCAGGCAGAGAGTAGGCGTAGCTTATCTCCATaGGTCCTATTTGGTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RYRGRGFGNAAVSQAESRRSLSP*VLFGCW Trigger: CCAGCAACCAAATAGGACCAATGGAGATAAGCTACG...CCTACTCTCTGCCTGAGATACTGCGGCGTTCCCAAACCCGCGGCCGCGGTATCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | AGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTAACGTCTGCAGTCTGGGCTaGAGGTGGGTAATACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SVKGKASQHPWLPSQLGNVCSLG*RWVILW Trigger: CCACAGTATTACCCACCTCAAGCCCAGACTGCAGAC...GTTACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | TCCACTGAAAACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGACAGGCTGTGCAATCTaGCTCCGAGGCAGGTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: STENDAVRVVSVKGKASQTGCAI*LRGRLL Trigger: GAGTAACCTGCCTCGGAGCAAGATTGCACAGCCTGT...CTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTTTTCAGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS TCA 90 bp | AGAGTCATCCTCCAACTCCGAGGTACTCAGCTCACTGTCGATGGATaGCTGCGGACTAAGTGGAGAGCCCCTGGAGGTATAACCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RVILQLRGTQLTVDG*LRTKWRAPGGITLL Trigger: GAGCAAGGTTATACCTCCAGGGGCTCTCCACTTAGTCCGCAGTCATCCATCGACAGTGAGCTGAGTACCTCGGAGTTGGAGGATGACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000162818.8 |
||
| CDS TCA 90 bp | AAATTGGTGTTCCAAATGTGGCAGAGCACCTCAAGAGTGGAAACCTaGGCCGGCAGGGATAGCATCTTGGGCCACGCAAGGAGACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: KLVFQMWQSTSRVET*AGRDSILGHARRHW Trigger: CCAGTGTCTCCTTGCGTGGCCCAAGATGCTATCCCTGCCGGCTCAGGTTTCCACTCTTGAGGTGCTCTGCCACATTTGGAACACCAATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159456.2 |
||
| CDS TCA 90 bp | AGTCTGGGCTTGAGGTGGGTAATACTGTGGCTGCTGGAAGTTATTTaGGGGGAAATACTGGGTACTGGGGCTCCTCCTGCAATCCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLGLRWVILWLLEVI*GEILGTGAPPAIPD Trigger: ATCCGGGATTGCAGGAGGAGCCCCAGTACCCAGTATTTCCCCTCAAATAACTTCCAGCAGCCACAGTATTACCCACCTCAAGCCCAGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS TCA 90 bp | AGAGTCATCCTCCAACTCCGAGGTACTCAGCTCACTGTCGATGGATaGCTGCGGACTAAGTGGAGAGCCCCTGGAGGTATAACCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RVILQLRGTQLTVDG*LRTKWRAPGGITCS Trigger: AGAACAGGTTATACCTCCAGGGGCTCTCCACTTAGTCCGCAGTCATCCATCGACAGTGAGCTGAGTACCTCGGAGTTGGAGGATGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | AGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTAACCTTCCATCTCAGGAGTaGGGTTATCTAGGACATGTC | + |
|
Preference number: 5 (lower is better) Translates to: SVKGKASQHPWLPSQLGNLPSQE*GYLGHV Trigger: GACATGTCCTAGATAACCCAACTCCTGAGATGGAAG...GTTACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | CTACAAAAACTTCCTAGATCTAAGGTAACGATACCGCGGCCGCGGGTTTGGGAAGTCTGCAGTCTGGGCTaGAGGTGGGTAATACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LQKLPRSKVTIPRPRVWEVCSLG*RWVILW Trigger: CCACAGTATTACCCACCTCAAGCCCAGACTGCAGAC...TTCCCAAACCCGCGGCCGCGGTATCGTTACCTTAGATCTAGGAAGTTTTTGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | AGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTACCCAGCCAGCTAGGTAACCGTAGCTTATCTCCATaGGTCCTATTTGGTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SVKGKASQHPWLPSQLGNRSLSP*VLFGCW Trigger: CCAGCAACCAAATAGGACCAATGGAGATAAGCTACG...GTTACCTAGCTGGCTGGGTAACCATGGATGCTGGGATGCTTTCCCCTTCACGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | TCCACTGAAAACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGGGTTACTCCCATTTATaGCCAGTGAAGGTCTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: STENDAVRVVSVKGKASQGYSHL*PVKVSE Trigger: TTCCGAGACCTTCACTGGCAATAAATGGGAGTAACC...CTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTTTTCAGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS CCA 90 bp | AAAGCTTTAAATTGGTGTTCCAAATGTGGCAGAGCACCTCAAGAGTaGAAACCTGAGCCGGCAGGGATAGCATCTTGGGCCACGCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KALNWCSKCGRAPQE*KPEPAGIASWATQG Trigger: TCCTTGCGTGGCCCAAGATGCTATCCCTGCCGGCTCAGGTTTCCACTCTTGAGGTGCTCTGCCACATTTGGAACACCAATTTAAAGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159456.2 |
||
| CDS-3UTR CAA 90 bp | TATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACCCTCGTCCAGCAGCGTaGGAGGCGGCAACGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: YGKALLIRLNLSQKVFRYPRPAA*EAATAA Trigger: CGCCGCCGTTGCCGCCTCCAACGCTGCTGGACGAGG...GTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
||
| CDS GCA 90 bp | ACTCTTCCTCGTCCTCCAGGCTGTAGCGATCATACTCTTGATCACTaGATGTCCCCTTTTTCCCTGAACTCAGGGATACACTGGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: TLPRPPGCSDHTLDH*MSPFSLNSGIHWNC Trigger: ACAGTTCCAGTGTATCCCTGAGTTCAGGGAAAAAGGGGACATGCAGTGATCAAGAGTATGATCGCTACAGCCTGGAGGACGAGGAAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 ENSMUST00000162818.8 |
||
| CDS-3UTR CAA 90 bp | AGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACGGAGCAGTACAGGAGAGCTGAGGTaGCTGCTGGCCGCAGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SIIDTPQSLSKSIQIRSSTGELR*LLAAAV Trigger: CACCGCTGCGGCCAGCAGCAACCTCAGCTCTCCTGT...ACTGCTCCGTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTACAAAAACTTCCTAGATCTAAGGTAACGATACCGCGGCCGCGGGTTTGGTATAACTGCGTGCCATaGGATAAAGGCATGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLQKLPRSKVTIPRPRVWYNCVP*DKGMPL Trigger: CAGCGGCATGCCTTTATCCAATGGCACGCAGTTATA...CCAAACCCGCGGCCGCGGTATCGTTACCTTAGATCTAGGAAGTTTTTGTAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | AACGATGCCGTGCGTGTGGTTAGCGTGAAGGGGAAAGCATCCCAGCATCCATGGTTGCAAAGCTTTAAATaGGTGTTCCAAATGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NDAVRVVSVKGKASQHPWLQSFK*VFQMWQ Trigger: CTGCCACATTTGGAACACCAATTTAAAGCTTTGCAA...CCATGGATGCTGGGATGCTTTCCCCTTCACGCTAACCACACGCACGGCATCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159456.2 |
||
| CDS-3UTR CAA 90 bp | GGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCACAGGAGAGCTGAGGTaGCTGCTGGCCGCAGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GTFKNLIWQSIIDTPQSLTGELR*LLAAAV Trigger: CACCGCTGCGGCCAGCAGCAACCTCAGCTCTCCTGT...GAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS GCA 90 bp | GCTTCCATCTCAGGAGTTGGGTTATCTAGGACATGTCTACACCACTaGAAAGGACTCGGGGATTTCTCTGGTGAGGTGAATGTCTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ASISGVGLSRTCLHH*KGLGDFSGEVNVFE Trigger: TTCAAAGACATTCACCTCACCAGAGAAATCCCCGAGTCCTTTGCAGTGGTGTAGACATGTCCTAGATAACCCAACTCCTGAGATGGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 ENSMUST00000162818.8 |
||
| CDS-3UTR CAA 90 bp | AGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACGGAGCAGTACAGGCTGTGCAATCTaGCTCCGAGGCAGGTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: SIIDTPQSLSKSIQIRSSTGCAI*LRGRLL Trigger: GAGTAACCTGCCTCGGAGCAAGATTGCACAGCCTGT...ACTGCTCCGTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | ACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCTGCTGCCTTGAACAGTaGGGCTCACATAGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSYGKALLIRLNLSQKVFCCLEQ*GSHRLW Trigger: CCACAGCCTATGTGAGCCCAACTGTTCAAGGCAGCA...GAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | GGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTGCTGCCTTGAACAGTaGGGCTCACATAGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GTFKNLIWQSIIDTPQSLCCLEQ*GSHRLW Trigger: CCACAGCCTATGTGAGCCCAACTGTTCAAGGCAGCA...GAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | ACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCACAGGCTGTGCAATCTaGCTCCGAGGCAGGTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: TSYGKALLIRLNLSQKVFTGCAI*LRGRLL Trigger: GAGTAACCTGCCTCGGAGCAAGATTGCACAGCCTGT...GAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATGGTGTGTTTTTGCTGATAGTCTGCAGTCTGGGCTaGAGGTGGGTAATACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSFNVKLCLKSYGVFLLIVCSLG*RWVILW Trigger: CCACAGTATTACCCACCTCAAGCCCAGACTGCAGAC...TATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 |
||
| CDS-3UTR CAA 90 bp | GTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTTGCTGCCTTGAACAGTaGGGCTCACATAGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLLKTSYGKALLIRLNLSCCLEQ*GSHRLW Trigger: CCACAGCCTATGTGAGCCCAACTGTTCAAGGCAGCA...AGAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATGGTGTGTTTTTGCTGATAGCTGCTGCTGCTGCCTaGAACAGTTGGGCTCACATA | + |
|
Preference number: 5 (lower is better) Translates to: CSFNVKLCLKSYGVFLLIAAAAA*NSWAHI Trigger: TATGTGAGCCCAACTGTTCAAGGCAGCAGCAGCAGC...TATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCCTGAGACTCTCTTCTaGCAGACGAGCCATGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGTFKNLIWQSIIDTPQSPETLF*QTSHDL Trigger: CAGATCATGGCTCGTCTGCAAGAAGAGAGTCTCAGG...AGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATGGTGTGTTTTTGCTGATAATTGGTCCTATTTGGTaGCTGGTCTGCAGTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CSFNVKLCLKSYGVFLLIIGPIW*LVCSLG Trigger: GCCCAGACTGCAGACCAGCAACCAAATAGGACCAAT...TATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 |
||
| CDS-3UTR CAA 90 bp | TATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACATTGGTCCTATTTGGTaGCTGGTCTGCAGTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: YGKALLIRLNLSQKVFRYIGPIW*LVCSLG Trigger: GCCCAGACTGCAGACCAGCAACCAAATAGGACCAAT...GTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | GAACAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAAATTGGTCCTATTTGGTaGCTGGTCTGCAGTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EQGTFKNLIWQSIIDTPQIGPIW*LVCSLG Trigger: GCCCAGACTGCAGACCAGCAACCAAATAGGACCAAT...TTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | GGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCCTCCATTGGTCCTATTaGGTTGCTGGTCTGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GTFKNLIWQSIIDTPQSLLHWSY*VAGLQS Trigger: AGACTGCAGACCAGCAACCAAATAGGACCAATGGAG...GAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | ACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCCTCCATTGGTCCTATTaGGTTGCTGGTCTGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSYGKALLIRLNLSQKVFLHWSY*VAGLQS Trigger: AGACTGCAGACCAGCAACCAAATAGGACCAATGGAG...GAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | CTCAAAAAGTATTCAGATACGGAGCAGTTCTACAAAAACTTCCTAGATCTAAGGCTTCCATCTCAGGAGTaGGGTTATCTAGGACATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKKYSDTEQFYKNFLDLRLPSQE*GYLGHV Trigger: GACATGTCCTAGATAACCCAACTCCTGAGATGGAAG...CCTTAGATCTAGGAAGTTTTTGTAGAACTGCTCCGTATCTGAATACTTTTTGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGTACTTTTAAAAACCTCATATGGCAAAGCATTATTGATACGCCTCAATCTCTCCATTGGTCCTATTaGGTTGCTGGTCTGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QGTFKNLIWQSIIDTPQSLHWSY*VAGLQS Trigger: AGACTGCAGACCAGCAACCAAATAGGACCAATGGAG...AGATTGAGGCGTATCAATAATGCTTTGCCATATGAGGTTTTTAAAAGTACCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTCGTTCAACGTAAAATTATGTCTCAAATCGTATGGTGTGTTTTTGCTGATGGTTACTCCCATTTATaGCCAGTGAAGGTCTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VLVQRKIMSQIVWCVFADGYSHL*PVKVSE Trigger: TTCCGAGACCTTCACTGGCAATAAATGGGAGTAACC...ATCAGCAAAAACACACCATACGATTTGAGACATAATTTTACGTTGAACGAGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 |
||
| CDS-3UTR CAA 90 bp | TATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACCGTAGCTTATCTCCATaGGTCCTATTTGGTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YGKALLIRLNLSQKVFRYRSLSP*VLFGCW Trigger: CCAGCAACCAAATAGGACCAATGGAGATAAGCTACG...GTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS-3UTR CAA 90 bp | TATGGCAAAGCATTATTGATACGCCTCAATCTCTCTCAAAAAGTATTCAGATACGGTTACTCCCATTTATaGCCAGTGAAGGTCTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: YGKALLIRLNLSQKVFRYGYSHL*PVKVSE Trigger: TTCCGAGACCTTCACTGGCAATAAATGGGAGTAACC...GTATCTGAATACTTTTTGAGAGAGATTGAGGCGTATCAATAATGCTTTGCCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS CAA 90 bp | CGGCCAAGCTCTCCAGGTCCAGCGGCTCCACCTCGTCCAGCAGCGTaGGAGGCGGCAACGGCGGCGTGGCGGCTTCCCCCGGCGGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RPSSPGPAAPPRPAA*EAATAAWRLPPAGS Trigger: GGACCCCGCCGGGGGAAGCCGCCACGCCGCCGTTGCCGCCTCCAACGCTGCTGGACGAGGTGGAGCCGCTGGACCTGGAGAGCTTGGCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
||
| CDS CCA 72 bp | GGCTGCCACCTCCGCCGAAGAAGCCCGCCGCCGGCTTaGAGTAGACGAAGGGCGCGTCAGCCGGCTGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GCHLRRRSPPPA*SRRRARQPAAG Trigger: GCCTGCAGCCGGCTGACGCGCCCTTCGTCTACTCCAAGCCGGCGGCGGGCTTCTTCGGCGGAGGTGGCAGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 |
||
| CDS CAA 90 bp | GCCGCTGCCGCCGCTGCTACCACTGCTGCCGCTGCTGCTGCTGCCTaGAACAGTTGGGCTCACATAGGCTGTGGCCTTCAGGGGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AAAAAATTAAAAAAA*NSWAHIGCGLQGLP Trigger: CGGCAGCCCCTGAAGGCCACAGCCTATGTGAGCCCAACTGTTCAAGGCAGCAGCAGCAGCGGCAGCAGTGGTAGCAGCGGCGGCAGCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS GCA 72 bp | TGCCGCTGCCGCCGCTGCTACCACTGCTGCCGCTGCTaGTGCTGCCTTGAACAGTTGGGCTCACATAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CRCRRCYHCCRC*CCLEQLGSHRL Trigger: CAGCCTATGTGAGCCCAACTGTTCAAGGCAGCAGCAGCAGCGGCAGCAGTGGTAGCAGCGGCGGCAGCGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
||
| CDS CAA 72 bp | GCCGCTGCTACCACTGCTGCCGCTGCTGCTGCTGCCTaGAACAGTTGGGCTCACATAGGCTGTGGCCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: AAATTAAAAAAA*NSWAHIGCGLQ Trigger: CTGAAGGCCACAGCCTATGTGAGCCCAACTGTTCAAGGCAGCAGCAGCAGCGGCAGCAGTGGTAGCAGCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS CAA 90 bp | GGTCTCGGAAGGGCGCTGCGACCCAGGATCCCAGAAGCCGCAGCTTaGTTCGGAGTAGGGATGCCCGTGGTGGAATATAACTGCGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: GLGRALRPRIPEAAA*FGVGMPVVEYNCVP Trigger: TGGCACGCAGTTATATTCCACCACGGGCATCCCTACTCCGAACAAAGCTGCGGCTTCTGGGATCCTGGGTCGCAGCGCCCTTCCGAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS GCA 72 bp | GCAGGTGAAGAGAAGAGACTCCGCCATCGGCTCGCTTaGTCCAGTCTGAAGCGCAGAGAGCGTCTGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: AGEEKRLRHRLA*SSLKRRERLAA Trigger: AGCAGCCAGACGCTCTCTGCGCTTCAGACTGGAGCAAGCGAGCCGATGGCGGAGTCTCTTCTCTTCACCTGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160805.8 |
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| CDS CAA 72 bp | GTAGGGATGCCCGTGGTGGAATATAACTGCGTGCCATaGGATAAAGGCATGCCGCTGCCGCTGCCGCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: VGMPVVEYNCVP*DKGMPLPLPPL Trigger: CAGCGGCGGCAGCGGCAGCGGCATGCCTTTATCCAATGGCACGCAGTTATATTCCACCACGGGCATCCCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS TCA 72 bp | GCCCACGCTGTGAACTCTGTGCTGAATCTGTCCTGGTaGCGGGATGCAGGACGGTACCCGAGAAACCCCACT | + |
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Preference number: 6 (lower is better) Translates to: AHAVNSVLNLSW*RDAGRYPRNPT Trigger: AGTGGGGTTTCTCGGGTACCGTCCTGCATCCCGTCACCAGGACAGATTCAGCACAGAGTTCACAGCGTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS TCA 72 bp | CTTGCTCCGAGGCAGGTTACTCCCATTTATTGCCAGTaGAGGTCTCGGAAGGGCGCTGCGACCCAGGATCCC | + |
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Preference number: 6 (lower is better) Translates to: LAPRQVTPIYCQ*RSRKGAATQDP Trigger: GGGATCCTGGGTCGCAGCGCCCTTCCGAGACCTTCACTGGCAATAAATGGGAGTAACCTGCCTCGGAGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS CCA 72 bp | CCTCTTTGGAAAGGTGAACACCTCGGAAGACGGGGCTaGGGTGGCGGCAGATGGTCAAACTCTTCCTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: PLWKGEHLGRRG*GGGRWSNSSSS Trigger: GGACGAGGAAGAGTTTGACCATCTGCCGCCACCCCAGCCCCGTCTTCCGAGGTGTTCACCTTTCCAAAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 ENSMUST00000162818.8 |
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| CDS CAA 72 bp | CTGCGGACTAAGTGGAGAGCCCCTGGAGGTATAACCTaGCTCCAGTCTGAAGCGCAGAGAGCGTCTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LRTKWRAPGGIT*LQSEAQRASGC Trigger: GCAGCCAGACGCTCTCTGCGCTTCAGACTGGAGCAAGGTTATACCTCCAGGGGCTCTCCACTTAGTCCGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000162818.8 |
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| CDS CAA 72 bp | AGGGCGCTGCGACCCAGGATCCCAGAAGCCGCAGCTTaGTTCGGAGTAGGGATGCCCGTGGTGGAATATAAC | + |
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Preference number: 6 (lower is better) Translates to: RALRPRIPEAAA*FGVGMPVVEYN Trigger: GTTATATTCCACCACGGGCATCCCTACTCCGAACAAAGCTGCGGCTTCTGGGATCCTGGGTCGCAGCGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS TCA 72 bp | GTGGAGAGCCCCTGGAGGTATAACCTTGCTCCAGTCTaGAGCGCAGAGAGCGTCTGGCTGCTTCCATCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VESPWRYNLAPV*SAESVWLLPSQ Trigger: CTGAGATGGAAGCAGCCAGACGCTCTCTGCGCTTCAGACTGGAGCAAGGTTATACCTCCAGGGGCTCTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069443.14 ENSMUST00000162818.8 |
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| CDS GCA 72 bp | TCCCATTTATTGCCAGTGAAGGTCTCGGAAGGGCGCTaGGACCCAGGATCCCAGAAGCCGCAGCTTTGTTCG | + |
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Preference number: 6 (lower is better) Translates to: SHLLPVKVSEGR*DPGSQKPQLCS Trigger: CGAACAAAGCTGCGGCTTCTGGGATCCTGGGTCGCAGCGCCCTTCCGAGACCTTCACTGGCAATAAATGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS CCA 72 bp | ACTGGGTACTGGGGCTCCTCCTGCAATCCCGGATGCTaGAGAAAGTCTGTGAGTGGGGGATCCCTCTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: TGYWGSSCNPGC*RKSVSGGSLFG Trigger: TCCAAAGAGGGATCCCCCACTCACAGACTTTCTCCAGCATCCGGGATTGCAGGAGGAGCCCCAGTACCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 ENSMUST00000162818.8 |
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| CDS TCA 72 bp | TTCCAAATGTGGCAGAGCACCTCAAGAGTGGAAACCTaGGCCGGCAGGGATAGCATCTTGGGCCACGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: FQMWQSTSRVET*AGRDSILGHAR Trigger: CCTTGCGTGGCCCAAGATGCTATCCCTGCCGGCTCAGGTTTCCACTCTTGAGGTGCTCTGCCACATTTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159456.2 |
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| CDS CCA 72 bp | GGCAGGGATAGCATCTTGGGCCACGCAAGGAGACACTaGCCAGGCTCCAGGAGACAGATACTTGATAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: GRDSILGHARRH*PGSRRQILDKL Trigger: GAGCTTATCAAGTATCTGTCTCCTGGAGCCTGGCCAGTGTCTCCTTGCGTGGCCCAAGATGCTATCCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159456.2 |
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| CDS CAA 72 bp | GTGCAATCTTGCTCCGAGGCAGGTTACTCCCATTTATaGCCAGTGAAGGTCTCGGAAGGGCGCTGCGACCCA | + |
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Preference number: 6 (lower is better) Translates to: VQSCSEAGYSHL*PVKVSEGRCDP Trigger: TGGGTCGCAGCGCCCTTCCGAGACCTTCACTGGCAATAAATGGGAGTAACCTGCCTCGGAGCAAGATTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS TCA 72 bp | CTCCAACTCCGAGGTACTCAGCTCACTGTCGATGGATaGCTGCGGACTAAGTGGAGAGCCCCTGGAGGTATA | + |
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Preference number: 6 (lower is better) Translates to: LQLRGTQLTVDG*LRTKWRAPGGI Trigger: TATACCTCCAGGGGCTCTCCACTTAGTCCGCAGTCATCCATCGACAGTGAGCTGAGTACCTCGGAGTTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 ENSMUST00000162818.8 |
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| CDS TCA 72 bp | CCACTTCCAGCTCCATGCAAGCTGGAGTCAAAGCTCTaGCTGCTCCTCACTGTCACAGGAGAGCTGAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: PLPAPCKLESKL*LLLTVTGELRL Trigger: CAACCTCAGCTCTCCTGTGACAGTGAGGAGCAGTCAGAGCTTTGACTCCAGCTTGCATGGAGCTGGAAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS GCA 72 bp | AATACTGGGTACTGGGGCTCCTCCTGCAATCCCGGATaGTGGAGAAAGTCTGTGAGTGGGGGATCCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: NTGYWGSSCNPG*WRKSVSGGSLF Trigger: AAAGAGGGATCCCCCACTCACAGACTTTCTCCAGCATCCGGGATTGCAGGAGGAGCCCCAGTACCCAGTATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 ENSMUST00000162818.8 |
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| CDS CCA 72 bp | CTCCTGCAATCCCGGATGCTGGAGAAAGTCTGTGAGTaGGGGATCCCTCTTTGGAAAGGTGAACACCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: LLQSRMLEKVCE*GIPLWKGEHLG Trigger: TCCGAGGTGTTCACCTTTCCAAAGAGGGATCCCCCACTCACAGACTTTCTCCAGCATCCGGGATTGCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 ENSMUST00000162818.8 |
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| CDS CAA 90 bp | CAGTCTGGGCTTGAGGTGGGTAATACTGTGGCTGCTGGAAGTTATTaGAGGGGAAATACTGGGTACTGGGGCTCCTCCTGCAATCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: QSGLEVGNTVAAGSY*RGNTGYWGSSCNPG Trigger: TCCGGGATTGCAGGAGGAGCCCCAGTACCCAGTATTTCCCCTCAAATAACTTCCAGCAGCCACAGTATTACCCACCTCAAGCCCAGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS CCA 72 bp | TACTGTGGCTGCTGGAAGTTATTTGAGGGGAAATACTaGGTACTGGGGCTCCTCCTGCAATCCCGGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: YCGCWKLFEGKY*VLGLLLQSRML Trigger: CAGCATCCGGGATTGCAGGAGGAGCCCCAGTACCCAGTATTTCCCCTCAAATAACTTCCAGCAGCCACAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 ENSMUST00000162818.8 |
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| CDS CCA 72 bp | AATTGGTGTTCCAAATGTGGCAGAGCACCTCAAGAGTaGAAACCTGAGCCGGCAGGGATAGCATCTTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: NWCSKCGRAPQE*KPEPAGIASWA Trigger: GGCCCAAGATGCTATCCCTGCCGGCTCAGGTTTCCACTCTTGAGGTGCTCTGCCACATTTGGAACACCAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159456.2 |
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| CDS CAA 72 bp | GGAGGCTGCAGGAAGCTTCTGACAGGCTGTGCAATCTaGCTCCGAGGCAGGTTACTCCCATTTATTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: GGCRKLLTGCAI*LRGRLLPFIAS Trigger: ACTGGCAATAAATGGGAGTAACCTGCCTCGGAGCAAGATTGCACAGCCTGTCAGAAGCTTCCTGCAGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS GCA 72 bp | GGGAGTACTAATGCCATTGCTATAAGGGCTGAGTCTTaGAACAGGGCTATAAGGGAAAGCCAGGGAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GSTNAIAIRAES*NRAIRESQGGR Trigger: CCTGCCTCCCTGGCTTTCCCTTATAGCCCTGTTGCAAGACTCAGCCCTTATAGCAATGGCATTAGTACTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160805.8 |
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| CDS CAA 72 bp | AGCGCAGAGAGCGTCTGGCTGCTTCCATCTCAGGAGTaGGGTTATCTAGGACATGTCTACACCACTGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: SAESVWLLPSQE*GYLGHVYTTAK Trigger: CTTTGCAGTGGTGTAGACATGTCCTAGATAACCCAACTCCTGAGATGGAAGCAGCCAGACGCTCTCTGCGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 ENSMUST00000162818.8 |
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| CDS CAA 72 bp | CTTGAGGTGGGTAATACTGTGGCTGCTGGAAGTTATTaGAGGGGAAATACTGGGTACTGGGGCTCCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LEVGNTVAAGSY*RGNTGYWGSSC Trigger: GCAGGAGGAGCCCCAGTACCCAGTATTTCCCCTCAAATAACTTCCAGCAGCCACAGTATTACCCACCTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS TCA 72 bp | TTGAGGTGGGTAATACTGTGGCTGCTGGAAGTTATTTaGGGGGAAATACTGGGTACTGGGGCTCCTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LRWVILWLLEVI*GEILGTGAPPA Trigger: TGCAGGAGGAGCCCCAGTACCCAGTATTTCCCCTCAAATAACTTCCAGCAGCCACAGTATTACCCACCTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS GCA 72 bp | CGTCCTCCAGGCTGTAGCGATCATACTCTTGATCACTaGATGTCCCCTTTTTCCCTGAACTCAGGGATACAC | + |
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Preference number: 6 (lower is better) Translates to: RPPGCSDHTLDH*MSPFSLNSGIH Trigger: GTGTATCCCTGAGTTCAGGGAAAAAGGGGACATGCAGTGATCAAGAGTATGATCGCTACAGCCTGGAGGACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 ENSMUST00000162818.8 |
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| CDS CAA 72 bp | GCCAGATTAGGCATGCTTCTTCGTAGCTTATCTCCATaGGTCCTATTTGGTTGCTGGTCTGCAGTCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: ARLGMLLRSLSP*VLFGCWSAVWA Trigger: AGCCCAGACTGCAGACCAGCAACCAAATAGGACCAATGGAGATAAGCTACGAAGAAGCATGCCTAATCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS GCA 72 bp | TCAGGAGTTGGGTTATCTAGGACATGTCTACACCACTaGAAAGGACTCGGGGATTTCTCTGGTGAGGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: SGVGLSRTCLHH*KGLGDFSGEVN Trigger: ATTCACCTCACCAGAGAAATCCCCGAGTCCTTTGCAGTGGTGTAGACATGTCCTAGATAACCCAACTCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000160805.8 ENSMUST00000162818.8 |
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| CDS CAA 72 bp | ATTGGTCCTATTTGGTTGCTGGTCTGCAGTCTGGGCTaGAGGTGGGTAATACTGTGGCTGCTGGAAGTTATT | + |
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Preference number: 6 (lower is better) Translates to: IGPIWLLVCSLG*RWVILWLLEVI Trigger: AATAACTTCCAGCAGCCACAGTATTACCCACCTCAAGCCCAGACTGCAGACCAGCAACCAAATAGGACCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 |
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| CDS TCA 72 bp | ATCATACTCTTGATCACTGCATGTCCCCTTTTTCCCTaGACTCAGGGATACACTGGAACTGTTTCTGGACAC | + |
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Preference number: 6 (lower is better) Translates to: IILLITACPLFP*TQGYTGTVSGH Trigger: GTGTCCAGAAACAGTTCCAGTGTATCCCTGAGTTCAGGGAAAAAGGGGACATGCAGTGATCAAGAGTATGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 ENSMUST00000162818.8 |
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| CDS TCA 72 bp | TGCCTGAGACTCTCTTCTTGCAGACGAGCCATGATCTaGACATCAGTAAGGTCCTGTAATTTATATCCCATG | + |
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Preference number: 6 (lower is better) Translates to: CLRLSSCRRAMI*TSVRSCNLYPM Trigger: CATGGGATATAAATTACAGGACCTTACTGATGTTCAGATCATGGCTCGTCTGCAAGAAGAGAGTCTCAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069443.14 ENSMUST00000159456.2 ENSMUST00000160805.8 ENSMUST00000162818.8 |
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| CDS CAA 90 bp | GATTTCTCTGGTGAGGTGAATGTCTTTGAAGAGCCAACATATAACTaGCTCTTCTCTTCAGTGCTTCCAACACAAATCCTCAAGCATACA | + |
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Preference number: 6 (lower is better) Translates to: DFSGEVNVFEEPTYN*LFSSVLPTQILKHT Trigger: TGTATGCTTGAGGATTTGTGTTGGAAGCACTGAAGAGAAGAGCAAGTTATATGTTGGCTCTTCAAAGACATTCACCTCACCAGAGAAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162818.8 |
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