Pregenerated sensors for SLA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027636Ensembl transcript IDs: ENSMUST00000029164.9, ENSMUST00000109561.4
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCAGTCCGAAGGACCCTTTTACTACAGCACAGGTACATGCCAATTaGGGCACTCCTGCCGCGTGGAACCGGGAAGACCCACGTCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: SSPKDPFTTAQVHAN*GTPAAWNREDPRLL Trigger: CAGGAGACGTGGGTCTTCCCGGTTCCACGCGGCAGGAGTGCCCCAATTGGCATGTACCTGTGCTGTAGTAAAAGGGTCCTTCGGACTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR GCA 90 bp | TCTTCTGTCCAGTCCGAAGGACCCTTTTACTACAGCACAGGTACATaGCAATTGGGGCACTCCTGCCGCGTGGAACCGGGAAGACCCACG | + |
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Preference number: 1 (lower is better) Translates to: SSVQSEGPFYYSTGT*QLGHSCRVEPGRPT Trigger: CGTGGGTCTTCCCGGTTCCACGCGGCAGGAGTGCCCCAATTGGCATGTACCTGTGCTGTAGTAAAAGGGTCCTTCGGACTGGACAGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR GCA 90 bp | GGACCCTTTTACTACAGCACAGGTACATGCCAATTGGGGCACTCCTaGCGCGTGGAACCGGGAAGACCCACGTCTCCTGAACTTAGAATC | + |
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Preference number: 1 (lower is better) Translates to: GPFYYSTGTCQLGHS*RVEPGRPTSPELRI Trigger: GATTCTAAGTTCAGGAGACGTGGGTCTTCCCGGTTCCACGCGGCAGGAGTGCCCCAATTGGCATGTACCTGTGCTGTAGTAAAAGGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR TCA 90 bp | TACACAGGGCCAGAGACAGAAAGTAGGTTAGTGGTTGCCAGTACCTaGAGCTCCGGAGAGAGGTGGCAAGTGACCGTGGGAACAGACTTT | + |
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Preference number: 1 (lower is better) Translates to: YTGPETESRLVVAST*SSGERWQVTVGTDF Trigger: AAAGTCTGTTCCCACGGTCACTTGCCACCTCTCTCCGGAGCTTCAGGTACTGGCAACCACTAACCTACTTTCTGTCTCTGGCCCTGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029164.9 |
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| 3UTR CCA 90 bp | ACAGCTGTTTGCCGAGTGGAGCTGCTGTTGAATTTGATGCGCCTCTaGATCCGGATGAAACATTGTCTTCCTTGGTTCTCCGTCAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: TAVCRVELLLNLMRL*IRMKHCLPWFSVRC Trigger: ACACCTGACGGAGAACCAAGGAAGACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCCACTCGGCAAACAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR TCA 90 bp | TCTCCCGTAGGTCATTTGGATCATCTTTTACACTGCCATCCACTATaGCTGATGGCATTTGCTCCCGTGTCTTCTGTCCAGTCCGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: SPVGHLDHLLHCHPL*LMAFAPVSSVQSEG Trigger: TCCTTCGGACTGGACAGAAGACACGGGAGCAAATGCCATCAGTCATAGTGGATGGCAGTGTAAAAGATGATCCAAATGACCTACGGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR GCA 90 bp | CATTGTCAACTGTTTTTCCTTGGATACCATCATGTAACAGCTGTTTaGCGAGTGGAGCTGCTGTTGAATTTGATGCGCCTCTGGATCCGG | + |
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Preference number: 1 (lower is better) Translates to: HCQLFFLGYHHVTAV*RVELLLNLMRLWIR Trigger: CCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCCACTCGGCAAACAGCTGTTACATGATGGTATCCAAGGAAAAACAGTTGACAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR TCA 90 bp | TGCCTTCATGTGGGGGAGGAGCCTGTGTTGATCCAGGTGACGATATaGATATTGCTTGTGTCTCCCGTAGGTCATTTGGATCATCTTTTA | + |
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Preference number: 1 (lower is better) Translates to: CLHVGEEPVLIQVTI*ILLVSPVGHLDHLL Trigger: TAAAAGATGATCCAAATGACCTACGGGAGACACAAGCAATATTCATATCGTCACCTGGATCAACACAGGCTCCTCCCCCACATGAAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR GCA 90 bp | TTTGGATCATCTTTTACACTGCCATCCACTATGACTGATGGCATTTaGTCCCGTGTCTTCTGTCCAGTCCGAAGGACCCTTTTACTACAG | + |
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Preference number: 1 (lower is better) Translates to: FGSSFTLPSTMTDGI*SRVFCPVRRTLLLQ Trigger: CTGTAGTAAAAGGGTCCTTCGGACTGGACAGAAGACACGGGAGCAAATGCCATCAGTCATAGTGGATGGCAGTGTAAAAGATGATCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR GCA 90 bp | GTCTTCCTTGGTTCTCCGTCAGGTGTACAGTTTTTAAACCATCACTaGATCTCAAGTCTTCTGAAAACACCATGTGTGTGGTCCATGGTA | + |
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Preference number: 1 (lower is better) Translates to: VFLGSPSGVQFLNHH*ISSLLKTPCVWSMV Trigger: TACCATGGACCACACACATGGTGTTTTCAGAAGACTTGAGATGCAGTGATGGTTTAAAAACTGTACACCTGACGGAGAACCAAGGAAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR CCA 90 bp | TGGAACCGGGAAGACCCACGTCTCCTGAACTTAGAATCAACGTGTTaGACATCAGTATTTTCCGCAAGGGTTGTGAAACTTTTCAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: WNREDPRLLNLESTC*TSVFSARVVKLFKE Trigger: TTCTTTGAAAAGTTTCACAACCCTTGCGGAAAATACTGATGTCCAACACGTTGATTCTAAGTTCAGGAGACGTGGGTCTTCCCGGTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR GCA 90 bp | ATTATCCTTTATGAACATCCTAAAGACCTCAGATTTATACATTGCTaGCTTCATGTGGGGGAGGAGCCTGTGTTGATCCAGGTGACGATA | + |
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Preference number: 1 (lower is better) Translates to: IILYEHPKDLRFIHC*LHVGEEPVLIQVTI Trigger: TATCGTCACCTGGATCAACACAGGCTCCTCCCCCACATGAAGGCAGCAATGTATAAATCTGAGGTCTTTAGGATGTTCATAAAGGATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR GCA 90 bp | ATAATTATCCTTTATGAACATCCTAAAGACCTCAGATTTATACATTaGTGCCTTCATGTGGGGGAGGAGCCTGTGTTGATCCAGGTGACG | + |
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Preference number: 1 (lower is better) Translates to: IIILYEHPKDLRFIH*CLHVGEEPVLIQVT Trigger: CGTCACCTGGATCAACACAGGCTCCTCCCCCACATGAAGGCAGCAATGTATAAATCTGAGGTCTTTAGGATGTTCATAAAGGATAATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR CCA 90 bp | TTAAACCATCACTGCATCTCAAGTCTTCTGAAAACACCATGTGTGTaGTCCATGGTACAATACAAGCAGCCATCTAATAAGTCTCCATTG | + |
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Preference number: 1 (lower is better) Translates to: LNHHCISSLLKTPCV*SMVQYKQPSNKSPL Trigger: CAATGGAGACTTATTAGATGGCTGCTTGTATTGTACCATGGACCACACACATGGTGTTTTCAGAAGACTTGAGATGCAGTGATGGTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR TCA 90 bp | GAGATGCCAGGTTGCTCAGAGAAAACACTCATTGACTTATTAATTTaGGTTCAGACTGAGGTACATAGAAAGACCTTATCCTCAAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: EMPGCSEKTLIDLLI*VQTEVHRKTLSSKE Trigger: TTCTTTTGAGGATAAGGTCTTTCTATGTACCTCAGTCTGAACTCAAATTAATAAGTCAATGAGTGTTTTCTCTGAGCAACCTGGCATCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029164.9 |
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| 3UTR CAA 90 bp | GTCCAGTCCGAAGGACCCTTTTACTACAGCACAGGTACATGCCAATaGGGGCACTCCTGCCGCGTGGAACCGGGAAGACCCACGTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: VQSEGPFYYSTGTCQ*GHSCRVEPGRPTSP Trigger: AGGAGACGTGGGTCTTCCCGGTTCCACGCGGCAGGAGTGCCCCAATTGGCATGTACCTGTGCTGTAGTAAAAGGGTCCTTCGGACTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR CCA 90 bp | GGACTTGATGGGAGATCATGGGAAGATCTGGATTGTCAGTCTTCCTCGTGCGTGCCCAGCCTTGCCTCCTaGAGCTTTGTCAGGGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: GLDGRSWEDLDCQSSSCVPSLAS*SFVRVS Trigger: GCTGACCCTGACAAAGCTCCAGGAGGCAAGGCTGGG...CACGCACGAGGAAGACTGACAATCCAGATCTTCCCATGATCTCCCATCAAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR CAA 90 bp | TCCCTCTCCTCCCACAGCAGCAGTAGCAGCCAGACTCTTTCTCTTTaGGCTGGAGTTGGTATTGGCATTTCAGAGAGGGTCCACCACCTG | + |
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Preference number: 2 (lower is better) Translates to: SLSSHSSSSSQTLSL*AGVGIGISERVHHL Trigger: CAGGTGGTGGACCCTCTCTGAAATGCCAATACCAACTCCAGCCAAAAGAGAAAGAGTCTGGCTGCTACTGCTGCTGTGGGAGGAGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR TCA 90 bp | GGACTTGATGGGAGATCATGGGAAGATCTGGATTGTCAGTCTTCCTCGTGCGTGAGGCCAGCCCTGCTTTaGACTGCACTGCACATGGAC | + |
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Preference number: 2 (lower is better) Translates to: GLDGRSWEDLDCQSSSCVRPALL*TALHMD Trigger: GTCCATGTGCAGTGCAGTTCAAAGCAGGGCTGGCCT...CACGCACGAGGAAGACTGACAATCCAGATCTTCCCATGATCTCCCATCAAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR TCA 90 bp | TTGCTCCCGTGTCTTCTGTCCAGTCCGAAGGACCCTTTTACTACAGCACAGGTAAGGCCAGCCCTGCTTTaGACTGCACTGCACATGGAC | + |
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Preference number: 2 (lower is better) Translates to: LLPCLLSSPKDPFTTAQVRPALL*TALHMD Trigger: GTCCATGTGCAGTGCAGTTCAAAGCAGGGCTGGCCT...TACCTGTGCTGTAGTAAAAGGGTCCTTCGGACTGGACAGAAGACACGGGAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR GCA 90 bp | GGAGCTGCTGTTGAATTTGATGCGCCTCTGGATCCGGATGAAACATTGTCTTCCTGTCAGTCTTCCTCGTaGGTGGGAGTTAGGTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: GAAVEFDAPLDPDETLSSCQSSS*VGVRWG Trigger: ACCCCACCTAACTCCCACGCACGAGGAAGACTGACA...GGAAGACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGTTCCTCTTGTCAATGCTTTCTGAGCCATCCTACCATCTGAGATGTGTTCCCAGCCTTGCCTCCTaGAGCTTTGTCAGGGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PVFLLSMLSEPSYHLRCVPSLAS*SFVRVS Trigger: GCTGACCCTGACAAAGCTCCAGGAGGCAAGGCTGGG...AACACATCTCAGATGGTAGGATGGCTCAGAAAGCATTGACAAGAGGAACACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR GCA 90 bp | CGAGTGGAGCTGCTGTTGAATTTGATGCGCCTCTGGATCCGGATGAAACATTGTTGTAGAGGCCAGCCCTaGTTTGAACTGCACTGCACA | + |
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Preference number: 2 (lower is better) Translates to: RVELLLNLMRLWIRMKHCCRGQP*FELHCT Trigger: TGTGCAGTGCAGTTCAAAGCAGGGCTGGCCTCTACA...ACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCCACTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR TCA 90 bp | GGAGCTGCTGTTGAATTTGATGCGCCTCTGGATCCGGATGAAACATTGTCTTCCCACCACCTGATGTCCTaGCTCAGTACTGAGATAGGT | + |
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Preference number: 2 (lower is better) Translates to: GAAVEFDAPLDPDETLSSHHLMS*LSTEIG Trigger: ACCTATCTCAGTACTGAGTCAGGACATCAGGTGGTG...GGAAGACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR TCA 90 bp | CGAGTGGAGCTGCTGTTGAATTTGATGCGCCTCTGGATCCGGATGAAACATTGTAGCCATCCTACCATCTaGGATGTGTTTGCATTCTGG | + |
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Preference number: 2 (lower is better) Translates to: RVELLLNLMRLWIRMKHCSHPTI*DVFAFW Trigger: CCAGAATGCAAACACATCTCAGATGGTAGGATGGCT...ACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCCACTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR CCA 90 bp | CCATCCGCCTTTGGGGAAGCATTTCTGAATTTGTCCATTGTCAACTGTTTTTCCTGTTTGACCACCAGGTaGCAAAACGGGGGTATGGGG | + |
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Preference number: 2 (lower is better) Translates to: PSAFGEAFLNLSIVNCFSCLTTR*QNGGMG Trigger: CCCCATACCCCCGTTTTGCCACCTGGTGGTCAAACA...GGAAAAACAGTTGACAATGGACAAATTCAGAAATGCTTCCCCAAAGGCGGATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR CAA 90 bp | TACCATCATGTAACAGCTGTTTGCCGAGTGGAGCTGCTGTTGAATTaGATGCGCCTCTGGATCCGGATGAAACATTGTCTTCCTTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: YHHVTAVCRVELLLN*MRLWIRMKHCLPWF Trigger: GAACCAAGGAAGACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCCACTCGGCAAACAGCTGTTACATGATGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR CAA 90 bp | CTTGGATACCATCATGTAACAGCTGTTTGCCGAGTGGAGCTGCTGTaGAATTTGATGCGCCTCTGGATCCGGATGAAACATTGTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LGYHHVTAVCRVELL*NLMRLWIRMKHCLP Trigger: AGGAAGACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCCACTCGGCAAACAGCTGTTACATGATGGTATCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR CAA 90 bp | CCATTGTCAACTGTTTTTCCTTGGATACCATCATGTAACAGCTGTTaGCCGAGTGGAGCTGCTGTTGAATTTGATGCGCCTCTGGATCCG | + |
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Preference number: 2 (lower is better) Translates to: PLSTVFPWIPSCNSC*PSGAAVEFDAPLDP Trigger: CGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCCACTCGGCAAACAGCTGTTACATGATGGTATCCAAGGAAAAACAGTTGACAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR GCA 90 bp | GGAGCTGCTGTTGAATTTGATGCGCCTCTGGATCCGGATGAAACATTGTCTTCCTGTTCCTCTTGTCAATaGTTTCTGAGCCATCCTACC | + |
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Preference number: 2 (lower is better) Translates to: GAAVEFDAPLDPDETLSSCSSCQ*FLSHPT Trigger: GGTAGGATGGCTCAGAAAGCATTGACAAGAGGAACA...GGAAGACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR CCA 90 bp | CGAGTGGAGCTGCTGTTGAATTTGATGCGCCTCTGGATCCGGATGAAACATTGTCATGTGTGTGGTCCATaGTACAATACAAGCAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: RVELLLNLMRLWIRMKHCHVCGP*YNTSSH Trigger: ATGGCTGCTTGTATTGTACCATGGACCACACACATG...ACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCCACTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR TCA 90 bp | TGCTCTCTCTGTCTTTTAGTAGGGCTGAGTAGCTGCTGTACTGGACATTTCTCTGCCTTAGGAGATACATaGCTTATCAGAAAGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: CSLCLLVGLSSCCTGHFSALGDT*LIRKPR Trigger: CCTGGGCTTTCTGATAAGTCATGTATCTCCTAAGGC...AGAGAAATGTCCAGTACAGCAGCTACTCAGCCCTACTAAAAGACAGAGAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR TCA 90 bp | GACCTCAGAAGTATTTTATTCTCTGTAGAGGCCAGCCCTGCTTTGAACTGCACTGCCTTAGGAGATACATaGCTTATCAGAAAGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: DLRSILFSVEASPALNCTALGDT*LIRKPR Trigger: CCTGGGCTTTCTGATAAGTCATGTATCTCCTAAGGC...AGTGCAGTTCAAAGCAGGGCTGGCCTCTACAGAGAATAAAATACTTCTGAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR TCA 90 bp | CCATCCGCCTTTGGGGAAGCATTTCTGAATTTGTCCATTGTCAACTGTTTTTCCGCCTTGCTTACCTACTaGCCTTACCCTCTGAACCTA | + |
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Preference number: 2 (lower is better) Translates to: PSAFGEAFLNLSIVNCFSALLTY*PYPLNL Trigger: TAGGTTCAGAGGGTAAGGTCAGTAGGTAAGCAAGGC...GGAAAAACAGTTGACAATGGACAAATTCAGAAATGCTTCCCCAAAGGCGGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR GCA 90 bp | TCTCCGTCAGGTGTACAGTTTTTAAACCATCACTGCATCTCAAGTCTTCTGAAATGTCAGTCTTCCTCGTaGGTGGGAGTTAGGTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: SPSGVQFLNHHCISSLLKCQSSS*VGVRWG Trigger: ACCCCACCTAACTCCCACGCACGAGGAAGACTGACA...TTTCAGAAGACTTGAGATGCAGTGATGGTTTAAAAACTGTACACCTGACGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR CCA 90 bp | CCATCCGCCTTTGGGGAAGCATTTCTGAATTTGTCCATTGTCAACTGTTTTTCCTCGGTGCCACAGTCTTaGTTCCCTTTCTCTTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: PSAFGEAFLNLSIVNCFSSVPQS*FPFSLC Trigger: GCACAAAGAGAAAGGGAACCAAGACTGTGGCACCGA...GGAAAAACAGTTGACAATGGACAAATTCAGAAATGCTTCCCCAAAGGCGGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR CCA 90 bp | GGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATTTTGTTTGACCACCAGGTaGCAAAACGGGGGTATGGGG | + |
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Preference number: 2 (lower is better) Translates to: GCETFQRTIRLWGSISEFCLTTR*QNGGMG Trigger: CCCCATACCCCCGTTTTGCCACCTGGTGGTCAAACA...AAATTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR CAA 90 bp | GTGGAACCGGGAAGACCCACGTCTCCTGAACTTAGAATCAACGTGTaGGACATCAGTATTTTCCGCAAGGGTTGTGAAACTTTTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: VEPGRPTSPELRINV*DISIFRKGCETFQR Trigger: TCTTTGAAAAGTTTCACAACCCTTGCGGAAAATACTGATGTCCAACACGTTGATTCTAAGTTCAGGAGACGTGGGTCTTCCCGGTTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGGCTGGTAGTTCTACAACACCTTCTGTTTATTTAATGAGATGCCAGGTTGAGAGAGGTGGCAAGTaGCCGTGGGAACAGACTTTT | + |
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Preference number: 2 (lower is better) Translates to: CVAGSSTTPSVYLMRCQVERGGK*PWEQTF Trigger: AAAAGTCTGTTCCCACGGTCACTTGCCACCTCTCTC...AACCTGGCATCTCATTAAATAAACAGAAGGTGTTGTAGAACTACCAGCCACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029164.9 |
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| 3UTR-3UTR GCA 90 bp | TCTCCGTCAGGTGTACAGTTTTTAAACCATCACTGCATCTCAAGTCTTCTGAAATGTAGAGGCCAGCCCTaGTTTGAACTGCACTGCACA | + |
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Preference number: 2 (lower is better) Translates to: SPSGVQFLNHHCISSLLKCRGQP*FELHCT Trigger: TGTGCAGTGCAGTTCAAAGCAGGGCTGGCCTCTACA...TTTCAGAAGACTTGAGATGCAGTGATGGTTTAAAAACTGTACACCTGACGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR GCA 90 bp | GGACTTGATGGGAGATCATGGGAAGATCTGGATTGTCAGTCTTCCTCGTGCGTGCATCTGAGATGTGTTTaGATTCTGGAAAAGACTTGT | + |
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Preference number: 2 (lower is better) Translates to: GLDGRSWEDLDCQSSSCVHLRCV*ILEKTC Trigger: ACAAGTCTTTTCCAGAATGCAAACACATCTCAGATG...CACGCACGAGGAAGACTGACAATCCAGATCTTCCCATGATCTCCCATCAAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR CCA 90 bp | AAGGGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATCGGTGCCACAGTCTTaGTTCCCTTTCTCTTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: KGCETFQRTIRLWGSISESVPQS*FPFSLC Trigger: GCACAAAGAGAAAGGGAACCAAGACTGTGGCACCGA...TTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTGCTGTTGAATTTGATGCGCCTCTGGATCCGGATGAAACATTGTCTTCCTCTTTCTCTTTTGGCTaGAGTTGGTATTGGCATTTC | + |
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Preference number: 2 (lower is better) Translates to: GAAVEFDAPLDPDETLSSSFSFG*SWYWHF Trigger: GAAATGCCAATACCAACTCCAGCCAAAAGAGAAAGA...GGAAGACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTGCTGTTGAATTTGATGCGCCTCTGGATCCGGATGAAACATTGTCTTCCAAAACACCATGTGTGTaGTCCATGGTACAATACAAG | + |
|
Preference number: 2 (lower is better) Translates to: GAAVEFDAPLDPDETLSSKTPCV*SMVQYK Trigger: CTTGTATTGTACCATGGACCACACACATGGTGTTTT...GGAAGACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR TCA 90 bp | AAGGGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATTGGCTGAAAGGACTTaGTGGGAGATCATGGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: KGCETFQRTIRLWGSISELAERT*WEIMGR Trigger: TCTTCCCATGATCTCCCATCAAGTCCTTTCAGCCAA...TTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR TCA 90 bp | TCTCCGTCAGGTGTACAGTTTTTAAACCATCACTGCATCTCAAGTCTTCTGAAAGCCTTGCTTACCTACTaGCCTTACCCTCTGAACCTA | + |
|
Preference number: 2 (lower is better) Translates to: SPSGVQFLNHHCISSLLKALLTY*PYPLNL Trigger: TAGGTTCAGAGGGTAAGGTCAGTAGGTAAGCAAGGC...TTTCAGAAGACTTGAGATGCAGTGATGGTTTAAAAACTGTACACCTGACGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTCTCCCGTAGGTCATTTGGATCATCTTTTACACTGCCATCCACTATGACTGCATCTCAAGTCTTCTaGAAACACCATGTGTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: CVSRRSFGSSFTLPSTMTASQVF*KHHVCG Trigger: ACCACACACATGGTGTTTTCAGAAGACTTGAGATGC...AGTCATAGTGGATGGCAGTGTAAAAGATGATCCAAATGACCTACGGGAGACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR GCA 90 bp | CTACATGGTCCCCTTAGTAAAATACAGAATACACAGGGCCAGAGACAGAAAGTAGTAGGGCTGAGTAGCTaGTGTACTGGACATTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LHGPLSKIQNTQGQRQKVVGLSS*CTGHFS Trigger: AGAGAAATGTCCAGTACAGCAGCTACTCAGCCCTAC...TACTTTCTGTCTCTGGCCCTGTGTATTCTGTATTTTACTAAGGGGACCATGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029164.9 |
||
| 3UTR-3UTR CCA 90 bp | CCATCCGCCTTTGGGGAAGCATTTCTGAATTTGTCCATTGTCAACTGTTTTTCCCTTGATGGGAGATCATaGGAAGATCTGGATTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: PSAFGEAFLNLSIVNCFSLDGRS*EDLDCQ Trigger: CTGACAATCCAGATCTTCCCATGATCTCCCATCAAG...GGAAAAACAGTTGACAATGGACAAATTCAGAAATGCTTCCCCAAAGGCGGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CCA 90 bp | TGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATTTGTCGGCTGGAGTTGGTATTaGCATTTCAGAGAGGGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: CETFQRTIRLWGSISEFVGWSWY*HFREGP Trigger: TGGACCCTCTCTGAAATGCCAATACCAACTCCAGCC...GACAAATTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTGGCTGGTAGTTCTACAACACCTTCTGTTTATTTAATGAGATGCCAGGTTTTGGCTGAAAGGACTTaGTGGGAGATCATGGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: CVAGSSTTPSVYLMRCQVLAERT*WEIMGR Trigger: TCTTCCCATGATCTCCCATCAAGTCCTTTCAGCCAA...AACCTGGCATCTCATTAAATAAACAGAAGGTGTTGTAGAACTACCAGCCACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029164.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTCTCCCGTAGGTCATTTGGATCATCTTTTACACTGCCATCCACTATGACTTGCTTTGAACTGCACTaGACATGGACTAGAAGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: CVSRRSFGSSFTLPSTMTCFELH*TWTRSS Trigger: ACTACTTCTAGTCCATGTGCAGTGCAGTTCAAAGCA...AGTCATAGTGGATGGCAGTGTAAAAGATGATCCAAATGACCTACGGGAGACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATGTTCCTCTTGTCAATaGTTTCTGAGCCATCCTACC | + |
|
Preference number: 2 (lower is better) Translates to: KGCETFQRTIRLWGSISECSSCQ*FLSHPT Trigger: GGTAGGATGGCTCAGAAAGCATTGACAAGAGGAACA...TTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAACTTGATGGGAGATCATaGGAAGATCTGGATTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: KGCETFQRTIRLWGSISELDGRS*EDLDCQ Trigger: CTGACAATCCAGATCTTCCCATGATCTCCCATCAAG...TTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTCTCCCGTAGGTCATTTGGATCATCTTTTACACTGCCATCCACTATGACTTCTTTTGGCTGGAGTTaGTATTGGCATTTCAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: CVSRRSFGSSFTLPSTMTSFGWS*YWHFRE Trigger: CTCTCTGAAATGCCAATACCAACTCCAGCCAAAAGA...AGTCATAGTGGATGGCAGTGTAAAAGATGATCCAAATGACCTACGGGAGACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR TCA 90 bp | TGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATTTGTCGCATCTCAAGTCTTCTaGAAACACCATGTGTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: CETFQRTIRLWGSISEFVASQVF*KHHVCG Trigger: ACCACACACATGGTGTTTTCAGAAGACTTGAGATGC...GACAAATTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTGGCTGGTAGTTCTACAACACCTTCTGTTTATTTAATGAGATGCCAGGTTCTCAGATTTATACATTaGTGCCTTCATGTGGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: CVAGSSTTPSVYLMRCQVLRFIH*CLHVGE Trigger: CTCCCCCACATGAAGGCAGCAATGTATAAATCTGAG...AACCTGGCATCTCATTAAATAAACAGAAGGTGTTGTAGAACTACCAGCCACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029164.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATTTGTCGATCATGGGAAGATCTaGATTGTCAGTCTTCCTCGT | + |
|
Preference number: 2 (lower is better) Translates to: CETFQRTIRLWGSISEFVDHGKI*IVSLPR Trigger: ACGAGGAAGACTGACAATCCAGATCTTCCCATGATC...GACAAATTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTCTCCCGTAGGTCATTTGGATCATCTTTTACACTGCCATCCACTATGACTTCTTTCTCTTTTGGCTaGAGTTGGTATTGGCATTTC | + |
|
Preference number: 2 (lower is better) Translates to: CVSRRSFGSSFTLPSTMTSFSFG*SWYWHF Trigger: GAAATGCCAATACCAACTCCAGCCAAAAGAGAAAGA...AGTCATAGTGGATGGCAGTGTAAAAGATGATCCAAATGACCTACGGGAGACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTCTCCCGTAGGTCATTTGGATCATCTTTTACACTGCCATCCACTATGACTAAAACACCATGTGTGTaGTCCATGGTACAATACAAG | + |
|
Preference number: 2 (lower is better) Translates to: CVSRRSFGSSFTLPSTMTKTPCV*SMVQYK Trigger: CTTGTATTGTACCATGGACCACACACATGGTGTTTT...AGTCATAGTGGATGGCAGTGTAAAAGATGATCCAAATGACCTACGGGAGACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTCTCCCGTAGGTCATTTGGATCATCTTTTACACTGCCATCCACTATGACTAAACAAATCTTTAACTaGAAGTGTGTTGGCATGCCT | + |
|
Preference number: 2 (lower is better) Translates to: CVSRRSFGSSFTLPSTMTKQIFN*KCVGMP Trigger: AGGCATGCCAACACACTTTCAGTTAAAGATTTGTTT...AGTCATAGTGGATGGCAGTGTAAAAGATGATCCAAATGACCTACGGGAGACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR GCA 90 bp | GGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATTTTGCTTTGAACTGCACTaGACATGGACTAGAAGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: GCETFQRTIRLWGSISEFCFELH*TWTRSS Trigger: ACTACTTCTAGTCCATGTGCAGTGCAGTTCAAAGCA...AAATTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTCTCCCGTAGGTCATTTGGATCATCTTTTACACTGCCATCCACTATGACTCATCTGAGATGTGTTTaGATTCTGGAAAAGACTTGT | + |
|
Preference number: 2 (lower is better) Translates to: CVSRRSFGSSFTLPSTMTHLRCV*ILEKTC Trigger: ACAAGTCTTTTCCAGAATGCAAACACATCTCAGATG...AGTCATAGTGGATGGCAGTGTAAAAGATGATCCAAATGACCTACGGGAGACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR GCA 72 bp | TACTACAGCACAGGTACATGCCAATTGGGGCACTCCTaGCGCGTGGAACCGGGAAGACCCACGTCTCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: YYSTGTCQLGHS*RVEPGRPTSPE Trigger: TTCAGGAGACGTGGGTCTTCCCGGTTCCACGCGGCAGGAGTGCCCCAATTGGCATGTACCTGTGCTGTAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR GCA 72 bp | CAGTCCGAAGGACCCTTTTACTACAGCACAGGTACATaGCAATTGGGGCACTCCTGCCGCGTGGAACCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: QSEGPFYYSTGT*QLGHSCRVEPG Trigger: TCCCGGTTCCACGCGGCAGGAGTGCCCCAATTGGCATGTACCTGTGCTGTAGTAAAAGGGTCCTTCGGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR CCA 72 bp | GCACAGGTACATGCCAATTGGGGCACTCCTGCCGCGTaGAACCGGGAAGACCCACGTCTCCTGAACTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AQVHANWGTPAA*NREDPRLLNLE Trigger: TTCTAAGTTCAGGAGACGTGGGTCTTCCCGGTTCCACGCGGCAGGAGTGCCCCAATTGGCATGTACCTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR CCA 72 bp | AAGGACCCTTTTACTACAGCACAGGTACATGCCAATTaGGGCACTCCTGCCGCGTGGAACCGGGAAGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: KDPFTTAQVHAN*GTPAAWNREDP Trigger: TGGGTCTTCCCGGTTCCACGCGGCAGGAGTGCCCCAATTGGCATGTACCTGTGCTGTAGTAAAAGGGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR TCA 72 bp | CCAGAGACAGAAAGTAGGTTAGTGGTTGCCAGTACCTaGAGCTCCGGAGAGAGGTGGCAAGTGACCGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PETESRLVVAST*SSGERWQVTVG Trigger: TCCCACGGTCACTTGCCACCTCTCTCCGGAGCTTCAGGTACTGGCAACCACTAACCTACTTTCTGTCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029164.9 |
||
| 3UTR GCA 72 bp | GAGCTTTGTCAGGGTCAGCGGAGTTGGAGCTCTCGGTaGCACAGTCTTGGTTCCCTTTCTCTTTGTGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ELCQGQRSWSSR*HSLGSLSLCAP Trigger: TGGAGCACAAAGAGAAAGGGAACCAAGACTGTGGCACCGAGAGCTCCAACTCCGCTGACCCTGACAAAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCTGTAGAGGCCAGCCCTGCTTTGAACTGCACTGCACATGGACTAGAAGTATTGCCTCCTGGAGCTTaGTCAGGGTCAGCGGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: FSVEASPALNCTAHGLEVLPPGA*SGSAEL Trigger: CAACTCCGCTGACCCTGACAAAGCTCCAGGAGGCAA...TACTTCTAGTCCATGTGCAGTGCAGTTCAAAGCAGGGCTGGCCTCTACAGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CAA 90 bp | CGAGTGGAGCTGCTGTTGAATTTGATGCGCCTCTGGATCCGGATGAAACATTGTTTGCCTCCTGGAGCTTaGTCAGGGTCAGCGGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RVELLLNLMRLWIRMKHCLPPGA*SGSAEL Trigger: CAACTCCGCTGACCCTGACAAAGCTCCAGGAGGCAA...ACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCCACTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR TCA 72 bp | TGGGGAGGACCTGGCTGTTTGAACACTGAAGTTGGCTaGAAGGACTTGATGGGAGATCATGGGAAGATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WGGPGCLNTEVG*KDLMGDHGKIW Trigger: CCAGATCTTCCCATGATCTCCCATCAAGTCCTTTCAGCCAACTTCAGTGTTCAAACAGCCAGGTCCTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR CCA 72 bp | CAGCCAGACTCTTTCTCTTTTGGCTGGAGTTGGTATTaGCATTTCAGAGAGGGTCCACCACCTGATGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QPDSFSFGWSWY*HFREGPPPDVL Trigger: CAGGACATCAGGTGGTGGACCCTCTCTGAAATGCCAATACCAACTCCAGCCAAAAGAGAAAGAGTCTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR CCA 72 bp | TGCCGAGTGGAGCTGCTGTTGAATTTGATGCGCCTCTaGATCCGGATGAAACATTGTCTTCCTTGGTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: CRVELLLNLMRL*IRMKHCLPWFS Trigger: GGAGAACCAAGGAAGACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCCACTCGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR TCA 72 bp | GTGGGGGAGGAGCCTGTGTTGATCCAGGTGACGATATaGATATTGCTTGTGTCTCCCGTAGGTCATTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VGEEPVLIQVTI*ILLVSPVGHLD Trigger: ATCCAAATGACCTACGGGAGACACAAGCAATATTCATATCGTCACCTGGATCAACACAGGCTCCTCCCCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR GCA 72 bp | TCTTTTACACTGCCATCCACTATGACTGATGGCATTTaGTCCCGTGTCTTCTGTCCAGTCCGAAGGACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SFTLPSTMTDGI*SRVFCPVRRTL Trigger: AAGGGTCCTTCGGACTGGACAGAAGACACGGGAGCAAATGCCATCAGTCATAGTGGATGGCAGTGTAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CAA 90 bp | CCATCCGCCTTTGGGGAAGCATTTCTGAATTTGTCCATTGTCAACTGTTTTTCCATGGGAAGATCTGGATaGTCAGTCTTCCTCGTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: PSAFGEAFLNLSIVNCFSMGRSG*SVFLVR Trigger: ACGCACGAGGAAGACTGACAATCCAGATCTTCCCAT...GGAAAAACAGTTGACAATGGACAAATTCAGAAATGCTTCCCCAAAGGCGGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCCCACGGCTGTAATCTGAAGTGTAAAGTGTCTGCTATGCATACAGTGAAAGAAACATTGTCTTCCTaGGTTCTCCGTCAGGTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: GSHGCNLKCKVSAMHTVKETLSS*VLRQVY Trigger: GTACACCTGACGGAGAACCAAGGAAGACAATGTTTC...TTTCACTGTATGCATAGCAGACACTTTACACTTCAGATTACAGCCGTGGGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029164.9 |
||
| 3UTR TCA 72 bp | ATTTGGATCATCTTTTACACTGCCATCCACTATGACTaGTGGCATTTGCTCCCGTGTCTTCTGTCCAGTCCG | + |
|
Preference number: 3 (lower is better) Translates to: IWIIFYTAIHYD*WHLLPCLLSSP Trigger: CGGACTGGACAGAAGACACGGGAGCAAATGCCATCAGTCATAGTGGATGGCAGTGTAAAAGATGATCCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR TCA 72 bp | GGTCATTTGGATCATCTTTTACACTGCCATCCACTATaGCTGATGGCATTTGCTCCCGTGTCTTCTGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GHLDHLLHCHPL*LMAFAPVSSVQ Trigger: CTGGACAGAAGACACGGGAGCAAATGCCATCAGTCATAGTGGATGGCAGTGTAAAAGATGATCCAAATGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR GCA 72 bp | ATTTTATTCTCTGTAGAGGCCAGCCCTGCTTTGAACTaGACTGCACATGGACTAGAAGTAGTAGGTAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ILFSVEASPALN*TAHGLEVVGRG Trigger: ACCCCTACCTACTACTTCTAGTCCATGTGCAGTGCAGTTCAAAGCAGGGCTGGCCTCTACAGAGAATAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR GCA 72 bp | CTGTTTTTCCTTGGATACCATCATGTAACAGCTGTTTaGCGAGTGGAGCTGCTGTTGAATTTGATGCGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LFFLGYHHVTAV*RVELLLNLMRL Trigger: GAGGCGCATCAAATTCAACAGCAGCTCCACTCGGCAAACAGCTGTTACATGATGGTATCCAAGGAAAAACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CAA 90 bp | CCATCCGCCTTTGGGGAAGCATTTCTGAATTTGTCCATTGTCAACTGTTTTTCCCATCCAGTGTTCCTCTaGTCAATGCTTTCTGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PSAFGEAFLNLSIVNCFSHPVFL*SMLSEP Trigger: TGGCTCAGAAAGCATTGACAAGAGGAACACTGGATG...GGAAAAACAGTTGACAATGGACAAATTCAGAAATGCTTCCCCAAAGGCGGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAAATGGGAAGATCTGGATaGTCAGTCTTCCTCGTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: KGCETFQRTIRLWGSISEMGRSG*SVFLVR Trigger: ACGCACGAGGAAGACTGACAATCCAGATCTTCCCAT...TTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATCATGTAACAGCTGTTaGCCGAGTGGAGCTGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KGCETFQRTIRLWGSISESCNSC*PSGAAV Trigger: AACAGCAGCTCCACTCGGCAAACAGCTGTTACATGA...TTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR GCA 72 bp | TATGAACATCCTAAAGACCTCAGATTTATACATTGCTaGCTTCATGTGGGGGAGGAGCCTGTGTTGATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: YEHPKDLRFIHC*LHVGEEPVLIQ Trigger: CTGGATCAACACAGGCTCCTCCCCCACATGAAGGCAGCAATGTATAAATCTGAGGTCTTTAGGATGTTCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAACAGACTCTTTCTCTTTaGGCTGGAGTTGGTATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KGCETFQRTIRLWGSISEQTLSL*AGVGIG Trigger: GCCAATACCAACTCCAGCCAAAAGAGAAAGAGTCTG...TTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAAGAAACATTGTCTTCCTaGGTTCTCCGTCAGGTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: KGCETFQRTIRLWGSISEETLSS*VLRQVY Trigger: GTACACCTGACGGAGAACCAAGGAAGACAATGTTTC...TTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR TCA 72 bp | TCCTCTTGTCAATGCTTTCTGAGCCATCCTACCATCTaGGATGTGTTTGCATTCTGGAAAAGACTTGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSCQCFLSHPTI*DVFAFWKRLVS Trigger: GCTCACAAGTCTTTTCCAGAATGCAAACACATCTCAGATGGTAGGATGGCTCAGAAAGCATTGACAAGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR GCA 72 bp | CTTTATGAACATCCTAAAGACCTCAGATTTATACATTaGTGCCTTCATGTGGGGGAGGAGCCTGTGTTGATC | + |
|
Preference number: 3 (lower is better) Translates to: LYEHPKDLRFIH*CLHVGEEPVLI Trigger: GATCAACACAGGCTCCTCCCCCACATGAAGGCAGCAATGTATAAATCTGAGGTCTTTAGGATGTTCATAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR CCA 72 bp | GAAGACCCACGTCTCCTGAACTTAGAATCAACGTGTTaGACATCAGTATTTTCCGCAAGGGTTGTGAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: EDPRLLNLESTC*TSVFSARVVKL Trigger: AAGTTTCACAACCCTTGCGGAAAATACTGATGTCCAACACGTTGATTCTAAGTTCAGGAGACGTGGGTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCGTCAGGTGTACAGTTTTTAAACCATCACTGCATCTCAAGTCTTCTGAAACATCCAGTGTTCCTCTaGTCAATGCTTTCTGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SPSGVQFLNHHCISSLLKHPVFL*SMLSEP Trigger: TGGCTCAGAAAGCATTGACAAGAGGAACACTGGATG...TTTCAGAAGACTTGAGATGCAGTGATGGTTTAAAAACTGTACACCTGACGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CAA 90 bp | GGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATTTCAGACTCTTTCTCTTTaGGCTGGAGTTGGTATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GCETFQRTIRLWGSISEFQTLSL*AGVGIG Trigger: GCCAATACCAACTCCAGCCAAAAGAGAAAGAGTCTG...AAATTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR CCA 72 bp | CACTGCATCTCAAGTCTTCTGAAAACACCATGTGTGTaGTCCATGGTACAATACAAGCAGCCATCTAATAAG | + |
|
Preference number: 3 (lower is better) Translates to: HCISSLLKTPCV*SMVQYKQPSNK Trigger: CTTATTAGATGGCTGCTTGTATTGTACCATGGACCACACACATGGTGTTTTCAGAAGACTTGAGATGCAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CAA 90 bp | GGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATTTTTAAACGGTGTCATTTaGTGTTTGACCACCAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: GCETFQRTIRLWGSISEFLNGVI*CLTTRW Trigger: CCACCTGGTGGTCAAACACAAAATGACACCGTTTAA...AAATTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CAA 90 bp | TGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATTTGTCCTCTTTTGGCTGGAGTaGGTATTGGCATTTCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CETFQRTIRLWGSISEFVLFWLE*VLAFQR Trigger: TCTCTGAAATGCCAATACCAACTCCAGCCAAAAGAG...GACAAATTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR CCA 72 bp | AAGGGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTaGGGAAGCATTTCTGAATTTGTCCATTGTCAACTG | + |
|
Preference number: 3 (lower is better) Translates to: KGCETFQRTIRL*GSISEFVHCQL Trigger: CAGTTGACAATGGACAAATTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGGCTGGTAGTTCTACAACACCTTCTGTTTATTTAATGAGATGCCAGGTTCCATCTGAGATGTGTTaGCATTCTGGAAAAGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: CVAGSSTTPSVYLMRCQVPSEMC*HSGKDL Trigger: CAAGTCTTTTCCAGAATGCAAACACATCTCAGATGG...AACCTGGCATCTCATTAAATAAACAGAAGGTGTTGTAGAACTACCAGCCACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029164.9 |
||
| 3UTR TCA 72 bp | GGTTGCTCAGAGAAAACACTCATTGACTTATTAATTTaGGTTCAGACTGAGGTACATAGAAAGACCTTATCC | + |
|
Preference number: 3 (lower is better) Translates to: GCSEKTLIDLLI*VQTEVHRKTLS Trigger: GGATAAGGTCTTTCTATGTACCTCAGTCTGAACTCAAATTAATAAGTCAATGAGTGTTTTCTCTGAGCAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029164.9 |
||
| 3UTR CAA 72 bp | GCCGTCTCTGTTCTCCCAGCCTTGCCTCCTGGAGCTTaGTCAGGGTCAGCGGAGTTGGAGCTCTCGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVSVLPALPPGA*SGSAELELSVP Trigger: TGGCACCGAGAGCTCCAACTCCGCTGACCCTGACAAAGCTCCAGGAGGCAAGGCTGGGAGAACAGAGACGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR TCA 90 bp | CGAGTGGAGCTGCTGTTGAATTTGATGCGCCTCTGGATCCGGATGAAACATTGTTCTGGCTCTCCCGGATaGGGAAGGCCCCTCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVELLLNLMRLWIRMKHCSGSPG*GRPLRG Trigger: ACCCCGGAGGGGCCTTCCTCATCCGGGAGAGCCAGA...ACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCCACTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR TCA 90 bp | GGAGCTGCTGTTGAATTTGATGCGCCTCTGGATCCGGATGAAACATTGTCTTCCTCTGGCTCTCCCGGATaGGGAAGGCCCCTCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GAAVEFDAPLDPDETLSSSGSPG*GRPLRG Trigger: ACCCCGGAGGGGCCTTCCTCATCCGGGAGAGCCAGA...GGAAGACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR CAA 72 bp | GAAGGACCCTTTTACTACAGCACAGGTACATGCCAATaGGGGCACTCCTGCCGCGTGGAACCGGGAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: EGPFYYSTGTCQ*GHSCRVEPGRP Trigger: GGGTCTTCCCGGTTCCACGCGGCAGGAGTGCCCCAATTGGCATGTACCTGTGCTGTAGTAAAAGGGTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGAGGCCAGCCCTGCTTTGAACTGCACTGCACATGGACTAGAAGTAGATCCGGTCCCAAGATaGAGGGCGGCTGAGTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FSVEASPALNCTAHGLEVDPVPR*RAAESD Trigger: GTCCGACTCAGCCGCCCTGCATCTTGGGACCGGATC...TACTTCTAGTCCATGTGCAGTGCAGTTCAAAGCAGGGCTGGCCTCTACAGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTAGAGGCCAGCCCTGCTTTGAACTGCACTGCACATGGACTAGAAGTAGGCCTGTTCACCTGCTaGGAAACTGCCCAGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSVEASPALNCTAHGLEVGLFTC*ETAQGH Trigger: GTGGCCCTGGGCAGTTTCCCAGCAGGTGAACAGGCC...TACTTCTAGTCCATGTGCAGTGCAGTTCAAAGCAGGGCTGGCCTCTACAGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR CCA 90 bp | TTGCTCCCGTGTCTTCTGTCCAGTCCGAAGGACCCTTTTACTACAGCACAGGTACAGCCTCTCCTGGTCTaGCTCTCCCGGATGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPCLLSSPKDPFTTAQVQPLLV*LSRMRK Trigger: CTTCCTCATCCGGGAGAGCCAGACCAGGAGAGGCTG...TACCTGTGCTGTAGTAAAAGGGTCCTTCGGACTGGACAGAAGACACGGGAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR GCA 90 bp | CGAGTGGAGCTGCTGTTGAATTTGATGCGCCTCTGGATCCGGATGAAACATTGTTCTGGCCTGTTCACCTaGTGGGAAACTGCCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVELLLNLMRLWIRMKHCSGLFT*WETAQG Trigger: GCCCTGGGCAGTTTCCCAGCAGGTGAACAGGCCAGA...ACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCCACTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR CCA 90 bp | GGACTTGATGGGAGATCATGGGAAGATCTGGATTGTCAGTCTTCCTCGTGCGTGATGGACACGGGTTCCTaGTCTGGACCAGAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLDGRSWEDLDCQSSSCVMDTGS*SGPEEL Trigger: CAGCTCCTCTGGTCCAGACCAGGAACCCGTGTCCAT...CACGCACGAGGAAGACTGACAATCCAGATCTTCCCATGATCTCCCATCAAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR TCA 90 bp | AGCAGCAGTAGCAGCCAGACTCTTTCTCTTTTGGCTGGAGTTGGTATTGGCATTAAGATGCAGGGCGGCTaGGTCGGACGGACAGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSQTLSLLAGVGIGIKMQGG*VGRTGN Trigger: ATTCCCTGTCCGTCCGACTCAGCCGCCCTGCATCTT...AATGCCAATACCAACTCCAGCCAAAAGAGAAAGAGTCTGGCTGCTACTGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR CCA 90 bp | GACCTCAGAAGTATTTTATTCTCTGTAGAGGCCAGCCCTGCTTTGAACTGCACTCAGAGGAGCTGGGGCTaGGGCTGGAGGTTTTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DLRSILFSVEASPALNCTQRSWG*GWRFSL Trigger: GAGGGAAAACCTCCAGCCCCAGCCCCAGCTCCTCTG...AGTGCAGTTCAAAGCAGGGCTGGCCTCTACAGAGAATAAAATACTTCTGAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR TCA 90 bp | GGCTCCCACGGCTGTAATCTGAAGTGTAAAGTGTCTGCTATGCATACAGTGAAACTCCATCCTCAGAGATaGTGGTCAGCGGCTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GSHGCNLKCKVSAMHTVKLHPQR*WSAAPR Trigger: TCGGGGAGCCGCTGACCATCATCTCTGAGGATGGAG...TTTCACTGTATGCATAGCAGACACTTTACACTTCAGATTACAGCCGTGGGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029164.9 |
||
| CDS-3UTR TCA 90 bp | TTGCTCCCGTGTCTTCTGTCCAGTCCGAAGGACCCTTTTACTACAGCACAGGTAGTATCCTGTAGTGTCTaGTCCGGTCCCAAGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPCLLSSPKDPFTTAQVVSCSV*SGPKMQ Trigger: CTGCATCTTGGGACCGGATCAGACACTACAGGATAC...TACCTGTGCTGTAGTAAAAGGGTCCTTCGGACTGGACAGAAGACACGGGAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR GCA 90 bp | CCAGTGTTCCTCTTGTCAATGCTTTCTGAGCCATCCTACCATCTGAGATGTGTTTCTGGCCTGTTCACCTaGTGGGAAACTGCCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVFLLSMLSEPSYHLRCVSGLFT*WETAQG Trigger: GCCCTGGGCAGTTTCCCAGCAGGTGAACAGGCCAGA...AACACATCTCAGATGGTAGGATGGCTCAGAAAGCATTGACAAGAGGAACACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR GCA 90 bp | CCATCCGCCTTTGGGGAAGCATTTCTGAATTTGTCCATTGTCAACTGTTTTTCCGATCCGGTCCCAAGATaGAGGGCGGCTGAGTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSAFGEAFLNLSIVNCFSDPVPR*RAAESD Trigger: GTCCGACTCAGCCGCCCTGCATCTTGGGACCGGATC...GGAAAAACAGTTGACAATGGACAAATTCAGAAATGCTTCCCCAAAGGCGGATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR GCA 90 bp | AGCAGCAGTAGCAGCCAGACTCTTTCTCTTTTGGCTGGAGTTGGTATTGGCATTCTCCCCACTCGCAGGTaGTTCCAGAAACAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSQTLSLLAGVGIGILPTRR*FQKQEA Trigger: AGCCTCCTGTTTCTGGAAGCACCTGCGAGTGGGGAG...AATGCCAATACCAACTCCAGCCAAAAGAGAAAGAGTCTGGCTGCTACTGCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR CCA 90 bp | TGTGTCTCCCGTAGGTCATTTGGATCATCTTTTACACTGCCATCCACTATGACTCAGAGGAGCTGGGGCTaGGGCTGGAGGTTTTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CVSRRSFGSSFTLPSTMTQRSWG*GWRFSL Trigger: GAGGGAAAACCTCCAGCCCCAGCCCCAGCTCCTCTG...AGTCATAGTGGATGGCAGTGTAAAAGATGATCCAAATGACCTACGGGAGACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGAGGCCAGCCCTGCTTTGAACTGCACTGCACATGGACTAGAAGTAGTATCCTGTAGTGTCTaGTCCGGTCCCAAGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSVEASPALNCTAHGLEVVSCSV*SGPKMQ Trigger: CTGCATCTTGGGACCGGATCAGACACTACAGGATAC...TACTTCTAGTCCATGTGCAGTGCAGTTCAAAGCAGGGCTGGCCTCTACAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR TCA 90 bp | AGCAGCAGTAGCAGCCAGACTCTTTCTCTTTTGGCTGGAGTTGGTATTGGCATTGAAGGTGAGGCGAGGTaGGATGTACAGCCAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSQTLSLLAGVGIGIEGEAR*DVQPAI Trigger: AATGGCTGGCTGTACATCTCACCTCGCCTCACCTTC...AATGCCAATACCAACTCCAGCCAAAAGAGAAAGAGTCTGGCTGCTACTGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR TCA 90 bp | TGCTCTCTCTGTCTTTTAGTAGGGCTGAGTAGCTGCTGTACTGGACATTTCTCTGGAGTGAGGGGAAGGTaGGGCGAGGTGAGATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: CSLCLLVGLSSCCTGHFSGVRGR*GEVRCT Trigger: TGTACATCTCACCTCGCCTCACCTTCCCCTCACTCC...AGAGAAATGTCCAGTACAGCAGCTACTCAGCCCTACTAAAAGACAGAGAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR CAA 72 bp | TCCCACAGCAGCAGTAGCAGCCAGACTCTTTCTCTTTaGGCTGGAGTTGGTATTGGCATTTCAGAGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SHSSSSSQTLSL*AGVGIGISERV Trigger: GACCCTCTCTGAAATGCCAATACCAACTCCAGCCAAAAGAGAAAGAGTCTGGCTGCTACTGCTGCTGTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR TCA 90 bp | AAGGGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAACTCCATCCTCAGAGATaGTGGTCAGCGGCTCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KGCETFQRTIRLWGSISELHPQR*WSAAPR Trigger: TCGGGGAGCCGCTGACCATCATCTCTGAGGATGGAG...TTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTAGAGGCCAGCCCTGCTTTGAACTGCACTGCACATGGACTAGAAGTATACACACTGGGCATGTaGTACTCTCTGCCTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FSVEASPALNCTAHGLEVYTLGM*YSLPET Trigger: AGTCTCAGGCAGAGAGTACCACATGCCCAGTGTGTA...TACTTCTAGTCCATGTGCAGTGCAGTTCAAAGCAGGGCTGGCCTCTACAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAGTAGCAGCCAGACTCTTTCTCTTTTGGCTGGAGTTGGTATTGGCATTTGGCACAGTCACAGGTaGAGGTGTATCTTTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSQTLSLLAGVGIGIWHSHR*RCIFAR Trigger: CCTGGCAAAGATACACCTCCACCTGTGACTGTGCCA...AATGCCAATACCAACTCCAGCCAAAAGAGAAAGAGTCTGGCTGCTACTGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR CCA 90 bp | TCCGTCAGGTGTACAGTTTTTAAACCATCACTGCATCTCAAGTCTTCTGAAAACCAGCCTCTCCTGGTCTaGCTCTCCCGGATGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVRCTVFKPSLHLKSSENQPLLV*LSRMRK Trigger: CTTCCTCATCCGGGAGAGCCAGACCAGGAGAGGCTG...GTTTTCAGAAGACTTGAGATGCAGTGATGGTTTAAAAACTGTACACCTGACGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR TCA 90 bp | TCTCCGTCAGGTGTACAGTTTTTAAACCATCACTGCATCTCAAGTCTTCTGAAAGGAGTGAGGGGAAGGTaGGGCGAGGTGAGATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SPSGVQFLNHHCISSLLKGVRGR*GEVRCT Trigger: TGTACATCTCACCTCGCCTCACCTTCCCCTCACTCC...TTTCAGAAGACTTGAGATGCAGTGATGGTTTAAAAACTGTACACCTGACGGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR CCA 90 bp | TGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATTTGTCATGGACACGGGTTCCTaGTCTGGACCAGAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CETFQRTIRLWGSISEFVMDTGS*SGPEEL Trigger: CAGCTCCTCTGGTCCAGACCAGGAACCCGTGTCCAT...GACAAATTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR CCA 90 bp | CCATCCGCCTTTGGGGAAGCATTTCTGAATTTGTCCATTGTCAACTGTTTTTCCCCTGAGACTTCCGACTaGACTGTCCACCAATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSAFGEAFLNLSIVNCFSPETSD*TVHQSP Trigger: TGGAGATTGGTGGACAGTCCAGTCGGAAGTCTCAGG...GGAAAAACAGTTGACAATGGACAAATTCAGAAATGCTTCCCCAAAGGCGGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR TCA 90 bp | TGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATTTGTCGAAGGTGAGGCGAGGTaGGATGTACAGCCAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: CETFQRTIRLWGSISEFVEGEAR*DVQPAI Trigger: AATGGCTGGCTGTACATCTCACCTCGCCTCACCTTC...GACAAATTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR CCA 90 bp | AAGGGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAAGTCTCAGAGATAGTCTaGCCTGTTCACCTGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGCETFQRTIRLWGSISEVSEIV*PVHLLG Trigger: TCCCAGCAGGTGAACAGGCCAGACTATCTCTGAGAC...TTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| CDS-3UTR CCA 90 bp | TGTGTGGCTGGTAGTTCTACAACACCTTCTGTTTATTTAATGAGATGCCAGGTTGTCTCAGAGATAGTCTaGCCTGTTCACCTGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CVAGSSTTPSVYLMRCQVVSEIV*PVHLLG Trigger: TCCCAGCAGGTGAACAGGCCAGACTATCTCTGAGAC...AACCTGGCATCTCATTAAATAAACAGAAGGTGTTGTAGAACTACCAGCCACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029164.9 |
||
| CDS-3UTR CCA 90 bp | TGTGTGGCTGGTAGTTCTACAACACCTTCTGTTTATTTAATGAGATGCCAGGTTCCTGAGACTTCCGACTaGACTGTCCACCAATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVAGSSTTPSVYLMRCQVPETSD*TVHQSP Trigger: TGGAGATTGGTGGACAGTCCAGTCGGAAGTCTCAGG...AACCTGGCATCTCATTAAATAAACAGAAGGTGTTGTAGAACTACCAGCCACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029164.9 |
||
| CDS-3UTR CCA 90 bp | TGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATTTGTCTGGCACAGTCACAGGTaGAGGTGTATCTTTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CETFQRTIRLWGSISEFVWHSHR*RCIFAR Trigger: CCTGGCAAAGATACACCTCCACCTGTGACTGTGCCA...GACAAATTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR CAA 72 bp | GTTGAATTTGATGCGCCTCTGGATCCGGATGAAACATaGTCTTCCTTGGTTCTCCGTCAGGTGTACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VEFDAPLDPDET*SSLVLRQVYSF Trigger: AAAACTGTACACCTGACGGAGAACCAAGGAAGACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
||
| 3UTR CAA 72 bp | ACTGTTTTTCCTTGGATACCATCATGTAACAGCTGTTaGCCGAGTGGAGCTGCTGTTGAATTTGATGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TVFPWIPSCNSC*PSGAAVEFDAP Trigger: AGGCGCATCAAATTCAACAGCAGCTCCACTCGGCAAACAGCTGTTACATGATGGTATCCAAGGAAAAACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR CAA 72 bp | GGAAGACCCACGTCTCCTGAACTTAGAATCAACGTGTaGGACATCAGTATTTTCCGCAAGGGTTGTGAAACT | + |
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Preference number: 4 (lower is better) Translates to: GRPTSPELRINV*DISIFRKGCET Trigger: AGTTTCACAACCCTTGCGGAAAATACTGATGTCCAACACGTTGATTCTAAGTTCAGGAGACGTGGGTCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS-3UTR CCA 90 bp | TCTCCGTCAGGTGTACAGTTTTTAAACCATCACTGCATCTCAAGTCTTCTGAAATACACACTGGGCATGTaGTACTCTCTGCCTGAGACT | + |
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Preference number: 4 (lower is better) Translates to: SPSGVQFLNHHCISSLLKYTLGM*YSLPET Trigger: AGTCTCAGGCAGAGAGTACCACATGCCCAGTGTGTA...TTTCAGAAGACTTGAGATGCAGTGATGGTTTAAAAACTGTACACCTGACGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR CAA 72 bp | AGAAGTATTTTATTCTCTGTAGAGGCCAGCCCTGCTTaGAACTGCACTGCACATGGACTAGAAGTAGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: RSILFSVEASPA*NCTAHGLEVVG Trigger: ACCTACTACTTCTAGTCCATGTGCAGTGCAGTTCAAAGCAGGGCTGGCCTCTACAGAGAATAAAATACTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| 3UTR CAA 72 bp | AAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATTaGTCCATTGTCAACTGTTTTTCCTTGGATACCATC | + |
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Preference number: 4 (lower is better) Translates to: KEPSAFGEAFLN*SIVNCFSLDTI Trigger: GATGGTATCCAAGGAAAAACAGTTGACAATGGACAAATTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS TCA 90 bp | GGACGGACAGGGAATAGCAGCCTCTCCTGGTCTGGCTCTCCCGGATaGGGAAGGCCCCTCCGGGGTTCCCAGGTAACAGGAGTAGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: GRTGNSSLSWSGSPG*GRPLRGSQVTGVVP Trigger: AGGAACTACTCCTGTTACCTGGGAACCCCGGAGGGGCCTTCCTCATCCGGGAGAGCCAGACCAGGAGAGGCTGCTATTCCCTGTCCGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS GCA 90 bp | GATGTAGGAACTGAGGGACTCTCGGAGCCCCTCACTGAGCAGAGATaGCTCCCCACTCGCAGGTGCTTCCAGAAACAGGAGGCTGCGGTC | + |
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Preference number: 5 (lower is better) Translates to: DVGTEGLSEPLTEQR*LPTRRCFQKQEAAV Trigger: GACCGCAGCCTCCTGTTTCTGGAAGCACCTGCGAGTGGGGAGGCATCTCTGCTCAGTGAGGGGCTCCGAGAGTCCCTCAGTTCCTACATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS CCA 90 bp | AGTTCCTCGGCTTTCTCCCGGCTCAGGCCCTCGTACAGCCACCCGTaGGCGACTTTAGCCACATACACACTGGGCATGTGGTACTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: SSSAFSRLRPSYSHP*ATLATYTLGMWYSL Trigger: CAGAGAGTACCACATGCCCAGTGTGTATGTGGCTAAAGTCGCCCACGGGTGGCTGTACGAGGGCCTGAGCCGGGAGAAAGCCGAGGAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS GCA 90 bp | GTCACAGGTGGAGGTGTATCTTTGCCAGGTAGTGGCCCAAGCTTCTaGAGGACACACGGCTCCCTGAGGGGACAGCAGATGCCATCTGCT | + |
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Preference number: 5 (lower is better) Translates to: VTGGGVSLPGSGPSF*RTHGSLRGQQMPSA Trigger: AGCAGATGGCATCTGCTGTCCCCTCAGGGAGCCGTGTGTCCTGCAGAAGCTTGGGCCACTACCTGGCAAAGATACACCTCCACCTGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS GCA 90 bp | ATTGTCAAGACGCTGTATCCTGTAGTGTCTGATCCGGTCCCAAGATaGAGGGCGGCTGAGTCGGACGGACAGGGAATAGCAGCCTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: IVKTLYPVVSDPVPR*RAAESDGQGIAASP Trigger: AGGAGAGGCTGCTATTCCCTGTCCGTCCGACTCAGCCGCCCTGCATCTTGGGACCGGATCAGACACTACAGGATACAGCGTCTTGACAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS TCA 90 bp | CTGAGACTTCCGACTGGACTGTCCACCAATCTCCATCCTCAGAGATaGTGGTCAGCGGCTCCCCGAGTCTCAGAGATAGTCTGGCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: LRLPTGLSTNLHPQR*WSAAPRVSEIVWPV Trigger: AACAGGCCAGACTATCTCTGAGACTCGGGGAGCCGCTGACCATCATCTCTGAGGATGGAGATTGGTGGACAGTCCAGTCGGAAGTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS CCA 90 bp | TACAGCCACCCGTGGGCGACTTTAGCCACATACACACTGGGCATGTaGTACTCTCTGCCTGAGACTTCCGACTGGACTGTCCACCAATCT | + |
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Preference number: 5 (lower is better) Translates to: YSHPWATLATYTLGM*YSLPETSDWTVHQS Trigger: AGATTGGTGGACAGTCCAGTCGGAAGTCTCAGGCAGAGAGTACCACATGCCCAGTGTGTATGTGGCTAAAGTCGCCCACGGGTGGCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS CCA 90 bp | ACATACACACTGGGCATGTGGTACTCTCTGCCTGAGACTTCCGACTaGACTGTCCACCAATCTCCATCCTCAGAGATGATGGTCAGCGGC | + |
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Preference number: 5 (lower is better) Translates to: TYTLGMWYSLPETSD*TVHQSPSSEMMVSG Trigger: GCCGCTGACCATCATCTCTGAGGATGGAGATTGGTGGACAGTCCAGTCGGAAGTCTCAGGCAGAGAGTACCACATGCCCAGTGTGTATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS TCA 90 bp | GGCGACTTTAGCCACATACACACTGGGCATGTGGTACTCTCTGCCTaGGACTTCCGACTGGACTGTCCACCAATCTCCATCCTCAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: GDFSHIHTGHVVLSA*DFRLDCPPISILRD Trigger: ATCTCTGAGGATGGAGATTGGTGGACAGTCCAGTCGGAAGTCTCAGGCAGAGAGTACCACATGCCCAGTGTGTATGTGGCTAAAGTCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS-3UTR CAA 90 bp | AGCAGCAGTAGCAGCCAGACTCTTTCTCTTTTGGCTGGAGTTGGTATTGGCATTCTTGTGTCTTTCTGGTaGCATGGACACGGGTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SSSSSQTLSLLAGVGIGILVSFW*HGHGFL Trigger: CAGGAACCCGTGTCCATGCAACCAGAAAGACACAAG...AATGCCAATACCAACTCCAGCCAAAAGAGAAAGAGTCTGGCTGCTACTGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS-3UTR CAA 90 bp | CCATCCGCCTTTGGGGAAGCATTTCTGAATTTGTCCATTGTCAACTGTTTTTCCCTTGTGTCTTTCTGGTaGCATGGACACGGGTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSAFGEAFLNLSIVNCFSLVSFW*HGHGFL Trigger: CAGGAACCCGTGTCCATGCAACCAGAAAGACACAAG...GGAAAAACAGTTGACAATGGACAAATTCAGAAATGCTTCCCCAAAGGCGGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS-3UTR CAA 90 bp | CCAGTGTTCCTCTTGTCAATGCTTTCTGAGCCATCCTACCATCTGAGATGTGTTATGTACAGCCAGCCATaGTCAAGACGCTGTATCCTG | + |
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Preference number: 5 (lower is better) Translates to: PVFLLSMLSEPSYHLRCVMYSQP*SRRCIL Trigger: CAGGATACAGCGTCTTGACAATGGCTGGCTGTACAT...AACACATCTCAGATGGTAGGATGGCTCAGAAAGCATTGACAAGAGGAACACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS-3UTR CAA 90 bp | GGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATTTGGTGGAGGTGTATCTTaGCCAGGTAGTGGCCCAAGC | + |
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Preference number: 5 (lower is better) Translates to: GCETFQRTIRLWGSISEFGGGVS*PGSGPS Trigger: GCTTGGGCCACTACCTGGCAAAGATACACCTCCACC...AAATTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS-3UTR CAA 90 bp | CGAGTGGAGCTGCTGTTGAATTTGATGCGCCTCTGGATCCGGATGAAACATTGTAATTTAGTGATGATGTaGGCACAGTCACAGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: RVELLLNLMRLWIRMKHCNLVMM*AQSQVE Trigger: CTCCACCTGTGACTGTGCCAACATCATCACTAAATT...ACAATGTTTCATCCGGATCCAGAGGCGCATCAAATTCAACAGCAGCTCCACTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS-3UTR CAA 90 bp | GGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATTTATGTACAGCCAGCCATaGTCAAGACGCTGTATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GCETFQRTIRLWGSISEFMYSQP*SRRCIL Trigger: CAGGATACAGCGTCTTGACAATGGCTGGCTGTACAT...AAATTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS-3UTR CAA 90 bp | GGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGCATTTCTGAATTTAATTTAGTGATGATGTaGGCACAGTCACAGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: GCETFQRTIRLWGSISEFNLVMM*AQSQVE Trigger: CTCCACCTGTGACTGTGCCAACATCATCACTAAATT...AAATTCAGAAATGCTTCCCCAAAGGCGGATGGTTCTTTGAAAAGTTTCACAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS TCA 72 bp | GGGAATAGCAGCCTCTCCTGGTCTGGCTCTCCCGGATaGGGAAGGCCCCTCCGGGGTTCCCAGGTAACAGGA | + |
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Preference number: 6 (lower is better) Translates to: GNSSLSWSGSPG*GRPLRGSQVTG Trigger: TCCTGTTACCTGGGAACCCCGGAGGGGCCTTCCTCATCCGGGAGAGCCAGACCAGGAGAGGCTGCTATTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS CCA 72 bp | GCTTTCTCCCGGCTCAGGCCCTCGTACAGCCACCCGTaGGCGACTTTAGCCACATACACACTGGGCATGTGG | + |
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Preference number: 6 (lower is better) Translates to: AFSRLRPSYSHP*ATLATYTLGMW Trigger: CCACATGCCCAGTGTGTATGTGGCTAAAGTCGCCCACGGGTGGCTGTACGAGGGCCTGAGCCGGGAGAAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS CCA 72 bp | ACACGGGTTCCTGGTCTGGACCAGAGGAGCTGGGGCTaGGGCTGGAGGTTTTCCCTCTGCTGGACAAACTTC | + |
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Preference number: 6 (lower is better) Translates to: TRVPGLDQRSWG*GWRFSLCWTNF Trigger: GAAGTTTGTCCAGCAGAGGGAAAACCTCCAGCCCCAGCCCCAGCTCCTCTGGTCCAGACCAGGAACCCGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS GCA 72 bp | GGAGGTGTATCTTTGCCAGGTAGTGGCCCAAGCTTCTaGAGGACACACGGCTCCCTGAGGGGACAGCAGATG | + |
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Preference number: 6 (lower is better) Translates to: GGVSLPGSGPSF*RTHGSLRGQQM Trigger: CATCTGCTGTCCCCTCAGGGAGCCGTGTGTCCTGCAGAAGCTTGGGCCACTACCTGGCAAAGATACACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS GCA 72 bp | ACGCTGTATCCTGTAGTGTCTGATCCGGTCCCAAGATaGAGGGCGGCTGAGTCGGACGGACAGGGAATAGCA | + |
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Preference number: 6 (lower is better) Translates to: TLYPVVSDPVPR*RAAESDGQGIA Trigger: TGCTATTCCCTGTCCGTCCGACTCAGCCGCCCTGCATCTTGGGACCGGATCAGACACTACAGGATACAGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS TCA 72 bp | CCGACTGGACTGTCCACCAATCTCCATCCTCAGAGATaGTGGTCAGCGGCTCCCCGAGTCTCAGAGATAGTC | + |
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Preference number: 6 (lower is better) Translates to: PTGLSTNLHPQR*WSAAPRVSEIV Trigger: GACTATCTCTGAGACTCGGGGAGCCGCTGACCATCATCTCTGAGGATGGAGATTGGTGGACAGTCCAGTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS CCA 72 bp | CCGTGGGCGACTTTAGCCACATACACACTGGGCATGTaGTACTCTCTGCCTGAGACTTCCGACTGGACTGTC | + |
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Preference number: 6 (lower is better) Translates to: PWATLATYTLGM*YSLPETSDWTV Trigger: GACAGTCCAGTCGGAAGTCTCAGGCAGAGAGTACCACATGCCCAGTGTGTATGTGGCTAAAGTCGCCCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS TCA 72 bp | AGCCACATACACACTGGGCATGTGGTACTCTCTGCCTaGGACTTCCGACTGGACTGTCCACCAATCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: SHIHTGHVVLSA*DFRLDCPPISI Trigger: GATGGAGATTGGTGGACAGTCCAGTCGGAAGTCTCAGGCAGAGAGTACCACATGCCCAGTGTGTATGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS GCA 72 bp | ATGATGTTGGCACAGTCACAGGTGGAGGTGTATCTTTaGCAGGTAGTGGCCCAAGCTTCTGCAGGACACACG | + |
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Preference number: 6 (lower is better) Translates to: MMLAQSQVEVYL*QVVAQASAGHT Trigger: CGTGTGTCCTGCAGAAGCTTGGGCCACTACCTGGCAAAGATACACCTCCACCTGTGACTGTGCCAACATCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS CCA 72 bp | CTGGGCATGTGGTACTCTCTGCCTGAGACTTCCGACTaGACTGTCCACCAATCTCCATCCTCAGAGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: LGMWYSLPETSD*TVHQSPSSEMM Trigger: CATCATCTCTGAGGATGGAGATTGGTGGACAGTCCAGTCGGAAGTCTCAGGCAGAGAGTACCACATGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS CAA 72 bp | GATGATGTTGGCACAGTCACAGGTGGAGGTGTATCTTaGCCAGGTAGTGGCCCAAGCTTCTGCAGGACACAC | + |
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Preference number: 6 (lower is better) Translates to: DDVGTVTGGGVS*PGSGPSFCRTH Trigger: GTGTGTCCTGCAGAAGCTTGGGCCACTACCTGGCAAAGATACACCTCCACCTGTGACTGTGCCAACATCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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| CDS CAA 90 bp | GAAACAGGAGGCTGCGGTCCAGCTTTTTCCAATTTAGTGATGATGTaGGCACAGTCACAGGTGGAGGTGTATCTTTGCCAGGTAGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: ETGGCGPAFSNLVMM*AQSQVEVYLCQVVA Trigger: GGCCACTACCTGGCAAAGATACACCTCCACCTGTGACTGTGCCAACATCATCACTAAATTGGAAAAAGCTGGACCGCAGCCTCCTGTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029164.9 ENSMUST00000109561.4 |
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