Pregenerated sensors for SLA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022372Ensembl transcript IDs: ENSMUST00000100572.10, ENSMUST00000164163.8, ENSMUST00000168522.2, ENSMUST00000168589.8
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTAAAGGCAGTCTCTGTGTGGTTTCCCTTGATTCCTGGAAGACCTaGGGTAACCAAGGAGGAATGCTGGCCTCCGTAAGACCCCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: CKGSLCVVSLDSWKT*GNQGGMLASVRPQV Trigger: CACCTGGGGTCTTACGGAGGCCAGCATTCCTCCTTGGTTACCTCAGGTCTTCCAGGAATCAAGGGAAACCACACAGAGACTGCCTTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR TCA 90 bp | TGCTTGTACCATCTGCAGGCTGAGCCCAGGTATATGGAATGCACATaGTGGGTGACAAATCCCTCCTGTATTTCTCTTACCAAGAATCCT | + |
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Preference number: 1 (lower is better) Translates to: CLYHLQAEPRYMECT*WVTNPSCISLTKNP Trigger: AGGATTCTTGGTAAGAGAAATACAGGAGGGATTTGTCACCCATCATGTGCATTCCATATACCTGGGCTCAGCCTGCAGATGGTACAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| 3UTR CCA 90 bp | GAAGTCATCTTCCCCATGTTCTTTCTCAGATGGATGCTTTCCACATaGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: EVIFPMFFLRWMLST*SQRRAIWISSWSQS Trigger: AGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTGGAAAGCATCCATCTGAGAAAGAACATGGGGAAGATGACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR CCA 90 bp | ATAGGTGTGAGAGAGAATGAAGGCTTCTCTTTCCTTAGTGCCCTGTaGGTTTTCTCTCACCTCTCACAATCATCTATGGCAGCATTCAGC | + |
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Preference number: 1 (lower is better) Translates to: IGVRENEGFSFLSAL*VFSHLSQSSMAAFS Trigger: GCTGAATGCTGCCATAGATGATTGTGAGAGGTGAGAGAAAACCCACAGGGCACTAAGGAAAGAGAAGCCTTCATTCTCTCTCACACCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| 3UTR TCA 90 bp | CCCTCCTGTATTTCTCTTACCAAGAATCCTTGTGATAGACAGGGATaGATAGCCATGACTATCCTGTCTCCCATTCCAGCAGGATATAGG | + |
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Preference number: 1 (lower is better) Translates to: PSCISLTKNPCDRQG*IAMTILSPIPAGYR Trigger: CCTATATCCTGCTGGAATGGGAGACAGGATAGTCATGGCTATTCATCCCTGTCTATCACAAGGATTCTTGGTAAGAGAAATACAGGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| 3UTR TCA 90 bp | ACCATCTGCAGGCTGAGCCCAGGTATATGGAATGCACATGATGGGTaGCAAATCCCTCCTGTATTTCTCTTACCAAGAATCCTTGTGATA | + |
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Preference number: 1 (lower is better) Translates to: TICRLSPGIWNAHDG*QIPPVFLLPRILVI Trigger: TATCACAAGGATTCTTGGTAAGAGAAATACAGGAGGGATTTGTCACCCATCATGTGCATTCCATATACCTGGGCTCAGCCTGCAGATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| 3UTR CCA 90 bp | TTTCTCAGATGGATGCTTTCCACATGGTCTCAGAGAAGGGCCATTTaGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCTTGCAAAAGTG | + |
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Preference number: 1 (lower is better) Translates to: FLRWMLSTWSQRRAI*ISSWSQSPSTLAKV Trigger: CACTTTTGCAAGAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTGGAAAGCATCCATCTGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR CCA 90 bp | ATGCTTTCCACATGGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTaGAGTCAGTCTCCAAGTACTCTTGCAAAAGTGTTCTGTTCTACA | + |
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Preference number: 1 (lower is better) Translates to: MLSTWSQRRAIWISS*SQSPSTLAKVFCST Trigger: TGTAGAACAGAACACTTTTGCAAGAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTGGAAAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR GCA 90 bp | AAGGGCCATTTGGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCTTaGAAAAGTGTTCTGTTCTACATACACACACAGTTCTTTGACGCA | + |
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Preference number: 1 (lower is better) Translates to: KGHLDFELESVSKYS*KSVLFYIHTQFFDA Trigger: TGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTTTGCAAGAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAGTTTGGCTCCAGGTAGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCACTGTGTGGTTTCCCTTaGTTCCTGGAAGACCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: GSLAPGRGHSGARKSSSPLCGFP*FLEDLR Trigger: CCTCAGGTCTTCCAGGAATCAAGGGAAACCACACAG...TGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCTACCTGGAGCCAAACTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR-3UTR TCA 90 bp | CACATGGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTCTCCAAGCTGTGTGGTTTCCCTTaGTTCCTGGAAGACCTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: HMVSEKGHLDFELESVSKLCGFP*FLEDLR Trigger: CCTCAGGTCTTCCAGGAATCAAGGGAAACCACACAG...CTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCCAGGTAGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCATGTTCTTTCGATTCCTGGAAGACCTaGGGTAACCAAGGAGGAATG | + |
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Preference number: 2 (lower is better) Translates to: APGRGHSGARKSSSPCSFDSWKT*GNQGGM Trigger: CATTCCTCCTTGGTTACCTCAGGTCTTCCAGGAATC...GAAAGAACATGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCTACCTGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCCTTTCCCAGAAAGGGGCATTCTTATTCATGCAGACGCCAGCCCTTCTTACAGGGAAGAGTTCCTCTaGTCAGTGTGTAAAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: SPFPERGILIHADASPSYREEFL*SVCKGS Trigger: ACTGCCTTTACACACTGATCAGAGGAACTCTTCCCT...GTAAGAAGGGCTGGCGTCTGCATGAATAAGAATGCCCCTTTCTGGGAAAGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTTCCACATGGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTGATTCCTGGAAGACCTaGGGTAACCAAGGAGGAATG | + |
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Preference number: 2 (lower is better) Translates to: CFPHGLREGPFGFRVGVSDSWKT*GNQGGM Trigger: CATTCCTCCTTGGTTACCTCAGGTCTTCCAGGAATC...ACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTGGAAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR-3UTR TCA 90 bp | GGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCAGGGAAGAGTTCCTCTaGTCAGTGTGTAAAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: GLREGPFGFRVGVSLQVLREEFL*SVCKGS Trigger: ACTGCCTTTACACACTGATCAGAGGAACTCTTCCCT...GAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTGGCTCCAGGTAGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCATGTTACACACACAGTTCTTTaGCGCACTGCCCCATTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: VWLQVEVILELGSHLPHVTHTVL*RTAPFH Trigger: ATGAAATGGGGCAGTGCGTCAAAGAACTGTGTGTGT...AACATGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCTACCTGGAGCCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCAAGGCAGTCTCTGTGTaGTTTCCCTTGATTCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: GLREGPFGFRVGVSLQVLKAVSV*FPLIPG Trigger: TCCAGGAATCAAGGGAAACCACACAGAGACTGCCTT...GAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCCAGGTAGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCATGTTCTTTCTGGATGCTTTCCACATaGTCTCAGAGAAGGGCCATT | + |
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Preference number: 2 (lower is better) Translates to: APGRGHSGARKSSSPCSFWMLST*SQRRAI Trigger: AATGGCCCTTCTCTGAGACCATGTGGAAAGCATCCA...GAAAGAACATGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCTACCTGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCCACATGGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTCTCACACACACAGTTCTTTaGCGCACTGCCCCATTTCAT | + |
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Preference number: 2 (lower is better) Translates to: FPHGLREGPFGFRVGVSLTHTVL*RTAPFH Trigger: ATGAAATGGGGCAGTGCGTCAAAGAACTGTGTGTGT...GAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR CAA 90 bp | GATGCTTTCCACATGGTCTCAGAGAAGGGCCATTTGGATTTCGAGTaGGAGTCAGTCTCCAAGTACTCTTGCAAAAGTGTTCTGTTCTAC | + |
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Preference number: 2 (lower is better) Translates to: DAFHMVSEKGHLDFE*ESVSKYSCKSVLFY Trigger: GTAGAACAGAACACTTTTGCAAGAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTGGAAAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR CAA 90 bp | CTTTCTCAGATGGATGCTTTCCACATGGTCTCAGAGAAGGGCCATTaGGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCTTGCAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: LSQMDAFHMVSEKGH*DFELESVSKYSCKS Trigger: ACTTTTGCAAGAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTGGAAAGCATCCATCTGAGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAGTTTGGCTCCAGGTAGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCATGCCCCATTTCATCATaGTTTAAACATGATGTGACT | + |
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Preference number: 2 (lower is better) Translates to: GSLAPGRGHSGARKSSSPCPISS*FKHDVT Trigger: AGTCACATCATGTTTAAATCATGATGAAATGGGGCA...TGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCTACCTGGAGCCAAACTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR-3UTR TCA 90 bp | AGTACTCTTGCAAAAGTGTTCTGTTCTACATACACACACAGTTCTTTGACGCACGATTCCTGGAAGACCTaGGGTAACCAAGGAGGAATG | + |
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Preference number: 2 (lower is better) Translates to: STLAKVFCSTYTHSSLTHDSWKT*GNQGGM Trigger: CATTCCTCCTTGGTTACCTCAGGTCTTCCAGGAATC...GTGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTTTGCAAGAGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGTGTTCTGTTCTACATACACACACAGTTCTTTGACGCACTGCCCCATTTCAAAGGCAGTCTCTGTGTaGTTTCCCTTGATTCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: KVFCSTYTHSSLTHCPISKAVSV*FPLIPG Trigger: TCCAGGAATCAAGGGAAACCACACAGAGACTGCCTT...TGAAATGGGGCAGTGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTTCCACATGGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTTGCCCCATTTCATCATaGTTTAAACATGATGTGACT | + |
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Preference number: 2 (lower is better) Translates to: CFPHGLREGPFGFRVGVSCPISS*FKHDVT Trigger: AGTCACATCATGTTTAAATCATGATGAAATGGGGCA...ACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTGGAAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR-3UTR GCA 90 bp | CTGACGAGTATCTTTGAAATAGCCATTTTGAAAGACCTCAGAGAACACCCATGCTCTTTCTCAGATGGATaGTTTCCACATGGTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: LTSIFEIAILKDLREHPCSFSDG*FPHGLR Trigger: TCTGAGACCATGTGGAAAGCATCCATCTGAGAAAGA...GCATGGGTGTTCTCTGAGGTCTTTCAAAATGGCTATTTCAAAGATACTCGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTTCTCACACACTGACGAGTATCTTTGAAATAGCCATTTTGAAAGACCTCAAGGCAGTCTCTGTGTaGTTTCCCTTGATTCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: FVSHTLTSIFEIAILKDLKAVSV*FPLIPG Trigger: TCCAGGAATCAAGGGAAACCACACAGAGACTGCCTT...GAGGTCTTTCAAAATGGCTATTTCAAAGATACTCGTCAGTGTGTGAGAAACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTTCTCACACACTGACGAGTATCTTTGAAATAGCCATTTTGAAAGACCTCTTCCTTAGTGCCCTGTaGGTTTTCTCTCACCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: FVSHTLTSIFEIAILKDLFLSAL*VFSHLS Trigger: TGAGAGGTGAGAGAAAACCCACAGGGCACTAAGGAA...GAGGTCTTTCAAAATGGCTATTTCAAAGATACTCGTCAGTGTGTGAGAAACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| 3UTR-3UTR CAA 90 bp | TCCCCTTTCCCAGAAAGGGGCATTCTTATTCATGCAGACGCCAGCCCTTCTTACTCTGTGTGGTTTCCCTaGATTCCTGGAAGACCTGAG | + |
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Preference number: 3 (lower is better) Translates to: SPFPERGILIHADASPSYSVWFP*IPGRPE Trigger: CTCAGGTCTTCCAGGAATCAAGGGAAACCACACAGA...GTAAGAAGGGCTGGCGTCTGCATGAATAAGAATGCCCCTTTCTGGGAAAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| 3UTR TCA 72 bp | AGTCTCTGTGTGGTTTCCCTTGATTCCTGGAAGACCTaGGGTAACCAAGGAGGAATGCTGGCCTCCGTAAGA | + |
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Preference number: 3 (lower is better) Translates to: SLCVVSLDSWKT*GNQGGMLASVR Trigger: TCTTACGGAGGCCAGCATTCCTCCTTGGTTACCTCAGGTCTTCCAGGAATCAAGGGAAACCACACAGAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR TCA 72 bp | CATCTGCAGGCTGAGCCCAGGTATATGGAATGCACATaGTGGGTGACAAATCCCTCCTGTATTTCTCTTACC | + |
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Preference number: 3 (lower is better) Translates to: HLQAEPRYMECT*WVTNPSCISLT Trigger: GGTAAGAGAAATACAGGAGGGATTTGTCACCCATCATGTGCATTCCATATACCTGGGCTCAGCCTGCAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| 3UTR-3UTR CAA 90 bp | GGTAGTTTGGCTCCAGGTAGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCAAGTCTCCAAGTACTCTaGCAAAAGTGTTCTGTTCTA | + |
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Preference number: 3 (lower is better) Translates to: GSLAPGRGHSGARKSSSPSLQVL*QKCSVL Trigger: TAGAACAGAACACTTTTGCAAGAGTACTTGGAGACT...TGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCTACCTGGAGCCAAACTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR TCA 72 bp | AGGAGCCAGAGATCATGGCCTCATAGCAGAAGTTACTaGCCTTGTGTGACATTTGTTTCTCACACACTGACG | + |
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Preference number: 3 (lower is better) Translates to: RSQRSWPHSRSY*PCVTFVSHTLT Trigger: CGTCAGTGTGTGAGAAACAAATGTCACACAAGGTCAGTAACTTCTGCTATGAGGCCATGATCTCTGGCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| 3UTR CCA 72 bp | TGGATGCTTTCCACATGGTCTCAGAGAAGGGCCATTTaGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCTT | + |
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Preference number: 3 (lower is better) Translates to: WMLSTWSQRRAI*ISSWSQSPSTL Trigger: AAGAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTGGAAAGCATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR-3UTR CAA 90 bp | AGTTTGGCTCCAGGTAGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCATGTAGTCTCCAAGTACTCTaGCAAAAGTGTTCTGTTCTA | + |
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Preference number: 3 (lower is better) Translates to: SLAPGRGHSGARKSSSPCSLQVL*QKCSVL Trigger: TAGAACAGAACACTTTTGCAAGAGTACTTGGAGACT...ACATGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCTACCTGGAGCCAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR GCA 72 bp | ATTCAGGGTTACATCATGTTGTTCTCCTTATCTCTCTaGTCCAGCCGGAATCCCAGCATTAAGGAATTCCAC | + |
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Preference number: 3 (lower is better) Translates to: IQGYIMLFSLSL*SSRNPSIKEFH Trigger: GTGGAATTCCTTAATGCTGGGATTCCGGCTGGAGCAGAGAGATAAGGAGAACAACATGATGTAACCCTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| 3UTR CCA 72 bp | ACATGGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTaGAGTCAGTCTCCAAGTACTCTTGCAAAAGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: TWSQRRAIWISS*SQSPSTLAKVF Trigger: GAACACTTTTGCAAGAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR CCA 72 bp | AGAGAGAATGAAGGCTTCTCTTTCCTTAGTGCCCTGTaGGTTTTCTCTCACCTCTCACAATCATCTATGGCA | + |
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Preference number: 3 (lower is better) Translates to: RENEGFSFLSAL*VFSHLSQSSMA Trigger: TGCCATAGATGATTGTGAGAGGTGAGAGAAAACCCACAGGGCACTAAGGAAAGAGAAGCCTTCATTCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| 3UTR TCA 72 bp | CGCACTGCCCCATTTCATCATGATTTAAACATGATGTaGCTCCACAATACTGATCAGACATCAGGGAAGAGT | + |
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Preference number: 3 (lower is better) Translates to: RTAPFHHDLNMM*LHNTDQTSGKS Trigger: ACTCTTCCCTGATGTCTGATCAGTATTGTGGAGTCACATCATGTTTAAATCATGATGAAATGGGGCAGTGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR TCA 72 bp | ATTTCTCTTACCAAGAATCCTTGTGATAGACAGGGATaGATAGCCATGACTATCCTGTCTCCCATTCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: ISLTKNPCDRQG*IAMTILSPIPA Trigger: TGCTGGAATGGGAGACAGGATAGTCATGGCTATTCATCCCTGTCTATCACAAGGATTCTTGGTAAGAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| 3UTR TCA 72 bp | TTAAGGAATTCCACTCATACCTCATTTATTCCCATTTaGCCTCAGCACAGTATTTCACCCAGGCATCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: LRNSTHTSFIPI*PQHSISPRHLP Trigger: AGGAAGATGCCTGGGTGAAATACTGTGCTGAGGTCAAATGGGAATAAATGAGGTATGAGTGGAATTCCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| 3UTR GCA 72 bp | TTGGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCTTaGAAAAGTGTTCTGTTCTACATACACACACAGTTC | + |
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Preference number: 3 (lower is better) Translates to: LDFELESVSKYS*KSVLFYIHTQF Trigger: GAACTGTGTGTGTATGTAGAACAGAACACTTTTGCAAGAGTACTTGGAGACTGACTCCAACTCGAAATCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR CCA 72 bp | TTTAGAAAGAGAAGAGACATAACCCAAAAGTCTCACTaGACCTATAAAGGTAGTTTGGCTCCAGGTAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: FRKRRDITQKSH*TYKGSLAPGRG Trigger: ACCTCTACCTGGAGCCAAACTACCTTTATAGGTCCAGTGAGACTTTTGGGTTATGTCTCTTCTCTTTCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR-3UTR CAA 90 bp | CTGACGAGTATCTTTGAAATAGCCATTTTGAAAGACCTCAGAGAACACCCATGCCTCATTTATTCCCATTaGACCTCAGCACAGTATTTC | + |
|
Preference number: 3 (lower is better) Translates to: LTSIFEIAILKDLREHPCLIYSH*TSAQYF Trigger: GAAATACTGTGCTGAGGTCAAATGGGAATAAATGAG...GCATGGGTGTTCTCTGAGGTCTTTCAAAATGGCTATTTCAAAGATACTCGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
||
| 3UTR TCA 72 bp | TGTGACATTTGTTTCTCACACACTGACGAGTATCTTTaGAATAGCCATTTTGAAAGACCTCAGAGAACACCC | + |
|
Preference number: 3 (lower is better) Translates to: CDICFSHTDEYL*NSHFERPQRTP Trigger: GGGTGTTCTCTGAGGTCTTTCAAAATGGCTATTTCAAAGATACTCGTCAGTGTGTGAGAAACAAATGTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
||
| 3UTR TCA 72 bp | CAAAAGTGTTCTGTTCTACATACACACACAGTTCTTTaGCGCACTGCCCCATTTCATCATGATTTAAACATG | + |
|
Preference number: 3 (lower is better) Translates to: QKCSVLHTHTVL*RTAPFHHDLNM Trigger: CATGTTTAAATCATGATGAAATGGGGCAGTGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | GGTAACCAAGGAGGAATGCTGGCCTCCGTAAGACCCCAGGTGACAGTCAAAGCCTCCGGTCGAAGGAGCTaGTGTCATCCCCTGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GNQGGMLASVRPQVTVKASGRRS*CHPLSG Trigger: CCCTGACAGGGGATGACAGCAGCTCCTTCGACCGGA...GGCTTTGACTGTCACCTGGGGTCTTACGGAGGCCAGCATTCCTCCTTGGTTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGTTACATCATGTTGTTCTCCTTATCTCTCTGCTCCAGCCGGAATCCCAGCAGGGCTGGTGCAAGGTaGTGGGTGGGATGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGYIMLFSLSLCSSRNPSRAGAR*WVGCWS Trigger: GCTCCAACATCCCACCCATCACCTTGCACCAGCCCT...GCTGGGATTCCGGCTGGAGCAGAGAGATAAGGAGAACAACATGATGTAACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCAGGTAGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCATGTTCTTTCGCGCAAGGTGACAGGTaGACCAGGGCTGGTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: APGRGHSGARKSSSPCSFAQGDR*TRAGAR Trigger: CCTTGCACCAGCCCTGGTTCACCTGTCACCTTGCGC...GAAAGAACATGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCTACCTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGTTACATCATGTTGTTCTCCTTATCTCTCTGCTCCAGCCGGAATCCCAGCTCCGGTCGAAGGAGCTaGTGTCATCCCCTGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGYIMLFSLSLCSSRNPSSGRRS*CHPLSG Trigger: CCCTGACAGGGGATGACAGCAGCTCCTTCGACCGGA...GCTGGGATTCCGGCTGGAGCAGAGAGATAAGGAGAACAACATGATGTAACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
||
| CDS-3UTR CCA 90 bp | GGTAACCAAGGAGGAATGCTGGCCTCCGTAAGACCCCAGGTGACAGTCAAAGCCGTGCAAGGTGATGGGTaGGATGTTGGAGCAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: GNQGGMLASVRPQVTVKAVQGDG*DVGAGM Trigger: CATACCTGCTCCAACATCCCACCCATCACCTTGCAC...GGCTTTGACTGTCACCTGGGGTCTTACGGAGGCCAGCATTCCTCCTTGGTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR TCA 90 bp | GGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCAGGGCTGGTGCAAGGTaGTGGGTGGGATGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLREGPFGFRVGVSLQVLRAGAR*WVGCWS Trigger: GCTCCAACATCCCACCCATCACCTTGCACCAGCCCT...GAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCTGCGCAAGGTGACAGGTaGACCAGGGCTGGTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSEKGHLDFELESVSKYSAQGDR*TRAGAR Trigger: CCTTGCACCAGCCCTGGTTCACCTGTCACCTTGCGC...AGAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTGGCTCCAGGTAGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCATGTTCCGGTCGAAGGAGCTaGTGTCATCCCCTGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLAPGRGHSGARKSSSPCSGRRS*CHPLSG Trigger: CCCTGACAGGGGATGACAGCAGCTCCTTCGACCGGA...ACATGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCTACCTGGAGCCAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR TCA 90 bp | GGTAACCAAGGAGGAATGCTGGCCTCCGTAAGACCCCAGGTGACAGTCAAAGCCGAAGGTGAGCCTTGGTaGGATGTAGTACCAGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GNQGGMLASVRPQVTVKAEGEPW*DVVPVV Trigger: AACAACTGGTACTACATCTCACCAAGGCTCACCTTC...GGCTTTGACTGTCACCTGGGGTCTTACGGAGGCCAGCATTCCTCCTTGGTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCATGTTCTTTCTCAGATGGAGCGCAAGGTGACAGGTaGACCAGGGCTGGTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGHSGARKSSSPCSFSDGAQGDR*TRAGAR Trigger: CCTTGCACCAGCCCTGGTTCACCTGTCACCTTGCGC...TCCATCTGAGAAAGAACATGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGTAAAGGCAGTCTCTGTGTGGTTTCCCTTGATTCCTGGAAGACCTGAGCCTCAGCCTTGTCCCTaGCCAGTCCTTCAAACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QCVKAVSVWFPLIPGRPEPQPCP*PVLQTA Trigger: GGCTGTTTGAAGGACTGGGCAGGGACAAGGCTGAGG...CTCAGGTCTTCCAGGAATCAAGGGAAACCACACAGAGACTGCCTTTACACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGTAAAGGCAGTCTCTGTGTGGTTTCCCTTGATTCCTGGAAGACCTGAGGTGAACCAGGGCTGGTaGAAGGTGATGGGTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QCVKAVSVWFPLIPGRPEVNQGW*KVMGGM Trigger: CATCCCACCCATCACCTTGCACCAGCCCTGGTTCAC...CTCAGGTCTTCCAGGAATCAAGGGAAACCACACAGAGACTGCCTTTACACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTGGCTCCAGGTAGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCATGTGTGAACCAGGGCTGGTaGAAGGTGATGGGTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLAPGRGHSGARKSSSPCVNQGW*KVMGGM Trigger: CATCCCACCCATCACCTTGCACCAGCCCTGGTTCAC...ACATGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCTACCTGGAGCCAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | GGTAACCAAGGAGGAATGCTGGCCTCCGTAAGACCCCAGGTGACAGTCAAAGCCCCCTCTGAACCTTCTTaGAATCTGGATACCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GNQGGMLASVRPQVTVKAPSEPS*NLDTLF Trigger: GAAGAGGGTATCCAGATTGCAAGAAGGTTCAGAGGG...GGCTTTGACTGTCACCTGGGGTCTTACGGAGGCCAGCATTCCTCCTTGGTTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | GGTAACCAAGGAGGAATGCTGGCCTCCGTAAGACCCCAGGTGACAGTCAAAGCCCCGAAGGTGGAGATGTaGATTTCATGCTATTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GNQGGMLASVRPQVTVKAPKVEM*ISCYSP Trigger: TGGGGAATAGCATGAAATCCACATCTCCACCTTCGG...GGCTTTGACTGTCACCTGGGGTCTTACGGAGGCCAGCATTCCTCCTTGGTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTGGCTCCAGGTAGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCATGTCCAGACAGGGTGTGGTaGGCACACAGCATAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLAPGRGHSGARKSSSPCPDRVW*AHSIDH Trigger: ATGGTCTATGCTGTGTGCTCACCACACCCTGTCTGG...ACATGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCTACCTGGAGCCAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCATGTTCTTTCTCAGATGGAAGGGCTGGTGCAAGGTaGTGGGTGGGATGTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGHSGARKSSSPCSFSDGRAGAR*WVGCWS Trigger: GCTCCAACATCCCACCCATCACCTTGCACCAGCCCT...TCCATCTGAGAAAGAACATGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCATGTTCTTTCTCAGATGGACCTCAGCCTTGTCCCTaGCCAGTCCTTCAAACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGHSGARKSSSPCSFSDGPQPCP*PVLQTA Trigger: GGCTGTTTGAAGGACTGGGCAGGGACAAGGCTGAGG...TCCATCTGAGAAAGAACATGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTTACATCATGTTGTTCTCCTTATCTCTCTGCTCCAGCCGGAATCCCAGCGGCCACACATATCCCTaGAATATAACTTTCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGYIMLFSLSLCSSRNPSGHTYP*NITFPA Trigger: GGCCGGGAAAGTTATATTCCAGGGATATGTGTGGCC...GCTGGGATTCCGGCTGGAGCAGAGAGATAAGGAGAACAACATGATGTAACCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
||
| CDS-3UTR GCA 90 bp | GGTAGTTTGGCTCCAGGTAGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCACCCTCTGAACCTTCTTaGAATCTGGATACCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSLAPGRGHSGARKSSSPPSEPS*NLDTLF Trigger: GAAGAGGGTATCCAGATTGCAAGAAGGTTCAGAGGG...TGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCTACCTGGAGCCAAACTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | GGTAGTTTGGCTCCAGGTAGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCAACAGGTAAGAGGCAATaGTTTCCCGAAGACCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLAPGRGHSGARKSSSPTGKRQ*FPEDHS Trigger: GCTATGGTCTTCGGGAAAGCATTGCCTCTTACCTGT...TGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCTACCTGGAGCCAAACTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | CCACATGGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTCTCCAAGCTAATGTCAGGAGATaGGTAGTCAGTCAGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHGLREGPFGFRVGVSLQANVRR*VVSQHS Trigger: GCTGTGCTGACTGACTACCCATCTCCTGACATTAGC...TTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCAGCCATGGTACACTCTaGCCACACATATCCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLREGPFGFRVGVSLQVLSHGTL*PHISLE Trigger: TTCCAGGGATATGTGTGGCCAGAGTGTACCATGGCT...GAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCTCAAACAGCCAGCCATaGTACACTCTGGCCACACAT | + |
|
Preference number: 4 (lower is better) Translates to: GLREGPFGFRVGVSLQVLSNSQP*YTLATH Trigger: ATGTGTGGCCAGAGTGTACCATGGCTGGCTGTTTGA...GAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGGTTACATCATGTTGTTCTCCTTATCTCTCTGCTCCAGCCGGAATCCCAGTCAAACAGCCAGCCATaGTACACTCTGGCCACACAT | + |
|
Preference number: 4 (lower is better) Translates to: SGLHHVVLLISLLQPESQSNSQP*YTLATH Trigger: ATGTGTGGCCAGAGTGTACCATGGCTGGCTGTTTGA...CTGGGATTCCGGCTGGAGCAGAGAGATAAGGAGAACAACATGATGTAACCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
||
| CDS-3UTR TCA 90 bp | TGTGACTCCACAATACTGATCAGACATCAGGGAAGAGTTCCTCTGATCAGTGTGCCAGGCATTGGAAGGTaGGCCTTGGTGAGATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CDSTILIRHQGRVPLISVPGIGR*ALVRCS Trigger: ACTACATCTCACCAAGGCTCACCTTCCAATGCCTGG...CACACTGATCAGAGGAACTCTTCCCTGATGTCTGATCAGTATTGTGGAGTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | CTGACGAGTATCTTTGAAATAGCCATTTTGAAAGACCTCAGAGAACACCCATGCGTGAACCAGGGCTGGTaGAAGGTGATGGGTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LTSIFEIAILKDLREHPCVNQGW*KVMGGM Trigger: CATCCCACCCATCACCTTGCACCAGCCCTGGTTCAC...GCATGGGTGTTCTCTGAGGTCTTTCAAAATGGCTATTTCAAAGATACTCGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCAGGTAGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCATGTTCTTTCCCCTCTGAACCTTCTTaGAATCTGGATACCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: APGRGHSGARKSSSPCSFPSEPS*NLDTLF Trigger: GAAGAGGGTATCCAGATTGCAAGAAGGTTCAGAGGG...GAAAGAACATGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCTACCTGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCTGGCCACACATATCCCTaGAATATAACTTTCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSEKGHLDFELESVSKYSGHTYP*NITFPA Trigger: GGCCGGGAAAGTTATATTCCAGGGATATGTGTGGCC...AGAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTTCCACATGGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTAGCCATGGTACACTCTaGCCACACATATCCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CFPHGLREGPFGFRVGVSSHGTL*PHISLE Trigger: TTCCAGGGATATGTGTGGCCAGAGTGTACCATGGCT...ACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTGGAAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCTTCAAACAGCCAGCCATaGTACACTCTGGCCACACAT | + |
|
Preference number: 4 (lower is better) Translates to: VSEKGHLDFELESVSKYSSNSQP*YTLATH Trigger: ATGTGTGGCCAGAGTGTACCATGGCTGGCTGTTTGA...AGAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTGTTCTGTTCTACATACACACACAGTTCTTTGACGCACTGCCCCATTTCACCAGACAGGGTGTGGTaGGCACACAGCATAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KVFCSTYTHSSLTHCPISPDRVW*AHSIDH Trigger: ATGGTCTATGCTGTGTGCTCACCACACCCTGTCTGG...TGAAATGGGGCAGTGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTTGCAAAAGTGTTCTGTTCTACATACACACACAGTTCTTTGACGCACTGCCCAGACAGGGTGTGGTaGGCACACAGCATAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLAKVFCSTYTHSSLTHCPDRVW*AHSIDH Trigger: ATGGTCTATGCTGTGTGCTCACCACACCCTGTCTGG...GCAGTGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTTTGCAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | AGTACTCTTGCAAAAGTGTTCTGTTCTACATACACACACAGTTCTTTGACGCACCCTCAGCCTTGTCCCTaGCCAGTCCTTCAAACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: STLAKVFCSTYTHSSLTHPQPCP*PVLQTA Trigger: GGCTGTTTGAAGGACTGGGCAGGGACAAGGCTGAGG...GTGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTTTGCAAGAGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | TGTGACTCCACAATACTGATCAGACATCAGGGAAGAGTTCCTCTGATCAGTGTGTTTGTATCTGGCAGCTaGAGCAGTTCCTCAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CDSTILIRHQGRVPLISVFVSGS*SSSSAL Trigger: CAAGGCTGAGGAACTGCTGCAGCTGCCAGATACAAA...CACACTGATCAGAGGAACTCTTCCCTGATGTCTGATCAGTATTGTGGAGTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | GTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCTACAGGTAAGAGGCAATaGTTTCCCGAAGACCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSEKGHLDFELESVSKYSTGKRQ*FPEDHS Trigger: GCTATGGTCTTCGGGAAAGCATTGCCTCTTACCTGT...AGAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | GTTTGGCTCCAGGTAGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCATGTTAACTCTTGCGTTTGCTaGCAGTGTACATTAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VWLQVEVILELGSHLPHVNSCVC*QCTLGR Trigger: TCTCCCTAATGTACACTGGCAGCAAACGCAAGAGTT...AACATGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCTACCTGGAGCCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | TCTCACAATCATCTATGGCAGCATTCAGCTTCTCCAGTTCCCCTTTCCCAGAAAAGCCATGGTACACTCTaGCCACACATATCCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHNHLWQHSASPVPLSQKSHGTL*PHISLE Trigger: TTCCAGGGATATGTGTGGCCAGAGTGTACCATGGCT...TTTCTGGGAAAGGGGAACTGGAGAAGCTGAATGCTGCCATAGATGATTGTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTTCCACATGGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTACCAATCTTTGTATCTaGCAGCTGCAGCAGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CFPHGLREGPFGFRVGVSTNLCI*QLQQFL Trigger: GAGGAACTGCTGCAGCTGCCAGATACAAAGATTGGT...ACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTGGAAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCACATGGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTCTCACCAATCTTTGTATCTaGCAGCTGCAGCAGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FPHGLREGPFGFRVGVSLTNLCI*QLQQFL Trigger: GAGGAACTGCTGCAGCTGCCAGATACAAAGATTGGT...GAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | TCTCACAATCATCTATGGCAGCATTCAGCTTCTCCAGTTCCCCTTTCCCAGAAACAGTCAAAGGTCTTCTaGCGCAAGGTGACAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHNHLWQHSASPVPLSQKQSKVF*RKVTGE Trigger: TTCACCTGTCACCTTGCGCCAGAAGACCTTTGACTG...TTTCTGGGAAAGGGGAACTGGAGAAGCTGAATGCTGCCATAGATGATTGTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACTCCACAATACTGATCAGACATCAGGGAAGAGTTCCTCTGATCAGTGTGCAGTCAAAGGTCTTCTaGCGCAAGGTGACAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CDSTILIRHQGRVPLISVQSKVF*RKVTGE Trigger: TTCACCTGTCACCTTGCGCCAGAAGACCTTTGACTG...CACACTGATCAGAGGAACTCTTCCCTGATGTCTGATCAGTATTGTGGAGTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTTCCACATGGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTAACTCTTGCGTTTGCTaGCAGTGTACATTAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CFPHGLREGPFGFRVGVSNSCVC*QCTLGR Trigger: TCTCCCTAATGTACACTGGCAGCAAACGCAAGAGTT...ACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTGGAAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | TACATCATGTTGTTCTCCTTATCTCTCTGCTCCAGCCGGAATCCCAGCATTAAGACCAATCTTTGTATCTaGCAGCTGCAGCAGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YIMLFSLSLCSSRNPSIKTNLCI*QLQQFL Trigger: GAGGAACTGCTGCAGCTGCCAGATACAAAGATTGGT...CTTAATGCTGGGATTCCGGCTGGAGCAGAGAGATAAGGAGAACAACATGATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTTGCAAAAGTGTTCTGTTCTACATACACACACAGTTCTTTGACGCACTGCGTGCAAGGTGATGGGTaGGATGTTGGAGCAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: TLAKVFCSTYTHSSLTHCVQGDG*DVGAGM Trigger: CATACCTGCTCCAACATCCCACCCATCACCTTGCAC...GCAGTGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTTTGCAAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| 3UTR CAA 72 bp | ATGGATGCTTTCCACATGGTCTCAGAGAAGGGCCATTaGGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: MDAFHMVSEKGH*DFELESVSKYS Trigger: AGAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTGGAAAGCATCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTGGCTCCAGGTAGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCATGTCACTCTCTCGAATCATaGAGCTACCAATCTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SLAPGRGHSGARKSSSPCHSLES*SYQSLY Trigger: ATACAAAGATTGGTAGCTTCATGATTCGAGAGAGTG...ACATGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCTACCTGGAGCCAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR TCA 90 bp | GGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCCACTCTCTCGAATCATaGAGCTACCAATCTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GLREGPFGFRVGVSLQVLHSLES*SYQSLY Trigger: ATACAAAGATTGGTAGCTTCATGATTCGAGAGAGTG...GAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR TCA 90 bp | AGTACTCTTGCAAAAGTGTTCTGTTCTACATACACACACAGTTCTTTGACGCACCCAGGCATTGGAAGGTaGGCCTTGGTGAGATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: STLAKVFCSTYTHSSLTHPGIGR*ALVRCS Trigger: ACTACATCTCACCAAGGCTCACCTTCCAATGCCTGG...GTGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTTTGCAAGAGTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | CTGACGAGTATCTTTGAAATAGCCATTTTGAAAGACCTCAGAGAACACCCATGCTTTGTATCTGGCAGCTaGAGCAGTTCCTCAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTSIFEIAILKDLREHPCFVSGS*SSSSAL Trigger: CAAGGCTGAGGAACTGCTGCAGCTGCCAGATACAAA...GCATGGGTGTTCTCTGAGGTCTTTCAAAATGGCTATTTCAAAGATACTCGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTTGCAAAAGTGTTCTGTTCTACATACACACACAGTTCTTTGACGCACTGCGGCCACACATATCCCTaGAATATAACTTTCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLAKVFCSTYTHSSLTHCGHTYP*NITFPA Trigger: GGCCGGGAAAGTTATATTCCAGGGATATGTGTGGCC...GCAGTGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTTTGCAAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | CTGACGAGTATCTTTGAAATAGCCATTTTGAAAGACCTCAGAGAACACCCATGCCAGTCAAAGGTCTTCTaGCGCAAGGTGACAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTSIFEIAILKDLREHPCQSKVF*RKVTGE Trigger: TTCACCTGTCACCTTGCGCCAGAAGACCTTTGACTG...GCATGGGTGTTCTCTGAGGTCTTTCAAAATGGCTATTTCAAAGATACTCGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
||
| 3UTR CAA 72 bp | CACATGGTCTCAGAGAAGGGCCATTTGGATTTCGAGTaGGAGTCAGTCTCCAAGTACTCTTGCAAAAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HMVSEKGHLDFE*ESVSKYSCKSV Trigger: AACACTTTTGCAAGAGTACTTGGAGACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTGTTCTGTTCTACATACACACACAGTTCTTTGACGCACTGCCCCATTTCAGAAGGTGAGCCTTGGTaGGATGTAGTACCAGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KVFCSTYTHSSLTHCPISEGEPW*DVVPVV Trigger: AACAACTGGTACTACATCTCACCAAGGCTCACCTTC...TGAAATGGGGCAGTGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | CTGACGAGTATCTTTGAAATAGCCATTTTGAAAGACCTCAGAGAACACCCATGCCCGAAGGTGGAGATGTaGATTTCATGCTATTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSIFEIAILKDLREHPCPKVEM*ISCYSP Trigger: TGGGGAATAGCATGAAATCCACATCTCCACCTTCGG...GCATGGGTGTTCTCTGAGGTCTTTCAAAATGGCTATTTCAAAGATACTCGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTTGCAAAAGTGTTCTGTTCTACATACACACACAGTTCTTTGACGCACTGCCCGAAGGTGGAGATGTaGATTTCATGCTATTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLAKVFCSTYTHSSLTHCPKVEM*ISCYSP Trigger: TGGGGAATAGCATGAAATCCACATCTCCACCTTCGG...GCAGTGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTTTGCAAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTCATTGTAACTGTGAAGGTTCCTCCTGTTTCACATTCAGGGTTACATCATGCTAATGTCAGGAGATaGGTAGTCAGTCAGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: QFIVTVKVPPVSHSGLHHANVRR*VVSQHS Trigger: GCTGTGCTGACTGACTACCCATCTCCTGACATTAGC...ATGATGTAACCCTGAATGTGAAACAGGAGGAACCTTCACAGTTACAATGAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
||
| CDS-3UTR GCA 90 bp | AGTACTCTTGCAAAAGTGTTCTGTTCTACATACACACACAGTTCTTTGACGCACACAGGTAAGAGGCAATaGTTTCCCGAAGACCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: STLAKVFCSTYTHSSLTHTGKRQ*FPEDHS Trigger: GCTATGGTCTTCGGGAAAGCATTGCCTCTTACCTGT...GTGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTTTGCAAGAGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTTGCAAAAGTGTTCTGTTCTACATACACACACAGTTCTTTGACGCACTGCAACTCTTGCGTTTGCTaGCAGTGTACATTAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLAKVFCSTYTHSSLTHCNSCVC*QCTLGR Trigger: TCTCCCTAATGTACACTGGCAGCAAACGCAAGAGTT...GCAGTGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTTTGCAAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTTTCTCACACACTGACGAGTATCTTTGAAATAGCCATTTTGAAAGACCTCGTGCAAGGTGATGGGTaGGATGTTGGAGCAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: FVSHTLTSIFEIAILKDLVQGDG*DVGAGM Trigger: CATACCTGCTCCAACATCCCACCCATCACCTTGCAC...GAGGTCTTTCAAAATGGCTATTTCAAAGATACTCGTCAGTGTGTGAGAAACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| CDS-3UTR CCA 90 bp | AAAGTGTTCTGTTCTACATACACACACAGTTCTTTGACGCACTGCCCCATTTCATGTAGTACCAGTTGTTaGGAAGACGGAAGATTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: KVFCSTYTHSSLTHCPISCSTSC*EDGRFD Trigger: ATCGAATCTTCCGTCTTCCCAACAACTGGTACTACA...TGAAATGGGGCAGTGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| CDS-3UTR TCA 90 bp | ACTCTTGCAAAAGTGTTCTGTTCTACATACACACACAGTTCTTTGACGCACTGCCACTCTCTCGAATCATaGAGCTACCAATCTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TLAKVFCSTYTHSSLTHCHSLES*SYQSLY Trigger: ATACAAAGATTGGTAGCTTCATGATTCGAGAGAGTG...GCAGTGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTTTGCAAGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| CDS-3UTR CCA 90 bp | CAGTTCATTGTAACTGTGAAGGTTCCTCCTGTTTCACATTCAGGGTTACATCATTGTAGTACCAGTTGTTaGGAAGACGGAAGATTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: QFIVTVKVPPVSHSGLHHCSTSC*EDGRFD Trigger: ATCGAATCTTCCGTCTTCCCAACAACTGGTACTACA...ATGATGTAACCCTGAATGTGAAACAGGAGGAACCTTCACAGTTACAATGAACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
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| CDS-3UTR CCA 90 bp | AGTACTCTTGCAAAAGTGTTCTGTTCTACATACACACACAGTTCTTTGACGCACTGTAGTACCAGTTGTTaGGAAGACGGAAGATTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: STLAKVFCSTYTHSSLTHCSTSC*EDGRFD Trigger: ATCGAATCTTCCGTCTTCCCAACAACTGGTACTACA...GTGCGTCAAAGAACTGTGTGTGTATGTAGAACAGAACACTTTTGCAAGAGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR CAA 72 bp | TTTGGATTTCGAGTTGGAGTCAGTCTCCAAGTACTCTaGCAAAAGTGTTCTGTTCTACATACACACACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FGFRVGVSLQVL*QKCSVLHTHTV Trigger: AACTGTGTGTGTATGTAGAACAGAACACTTTTGCAAGAGTACTTGGAGACTGACTCCAACTCGAAATCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
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| 3UTR CAA 72 bp | AAGTACCCCCAAATACTACTCAAAGTTCCAATCACATaGACCACAACAGAAAACAGCACAGAAGATAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KYPQILLKVPIT*TTTENSTEDSE Trigger: TTCACTATCTTCTGTGCTGTTTTCTGTTGTGGTCAATGTGATTGGAACTTTGAGTAGTATTTGGGGGTACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
||
| CDS CCA 90 bp | TGGCGCAAGGTGACAGGTGAACCAGGGCTGGTGCAAGGTGATGGGTaGGATGTTGGAGCAGGTATGTTCTGTGCCAGACAGGGTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WRKVTGEPGLVQGDG*DVGAGMFCARQGVV Trigger: CACCACACCCTGTCTGGCACAGAACATACCTGCTCCAACATCCCACCCATCACCTTGCACCAGCCCTGGTTCACCTGTCACCTTGCGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
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| CDS GCA 90 bp | CAGTGTACATTAGGGAGAGACTCTTCTTCTTCCGGTCGAAGGAGCTaGTGTCATCCCCTGTCAGGGACAGGTAAGAGGCAATGCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QCTLGRDSSSSGRRS*CHPLSGTGKRQCFP Trigger: GGGAAAGCATTGCCTCTTACCTGTCCCTGACAGGGGATGACAGCAGCTCCTTCGACCGGAAGAAGAAGAGTCTCTCCCTAATGTACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
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| CDS GCA 90 bp | GATTCGTCCACTCTGAGTGGGTTCTCTGCTCCCTCTGAACCTTCTTaGAATCTGGATACCCTCTTCCAGTCAAAGGTCTTCTGGCGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DSSTLSGFSAPSEPS*NLDTLFQSKVFWRK Trigger: CTTGCGCCAGAAGACCTTTGACTGGAAGAGGGTATCCAGATTGCAAGAAGGTTCAGAGGGAGCAGAGAACCCACTCAGAGTGGACGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
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| CDS TCA 90 bp | CTCTGGCCACACATATCCCTGGAATATAACTTTCCCGGCCAGTGCTaGGAGAAATGGCTTTCCACCAGCCCCCTTCATCAGAAATTACAC | + |
|
Preference number: 5 (lower is better) Translates to: LWPHISLEYNFPGQC*EKWLSTSPLHQKLH Trigger: GTGTAATTTCTGATGAAGGGGGCTGGTGGAAAGCCATTTCTCTCAGCACTGGCCGGGAAAGTTATATTCCAGGGATATGTGTGGCCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
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| CDS TCA 90 bp | CCACTTCAGAATAATGAGTCACCAGGTCCTCCAGGCATTGGAAGGTaGGCCTTGGTGAGATGTAGTACCAGTTGTTGGGAAGACGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLQNNESPGPPGIGR*ALVRCSTSCWEDGR Trigger: TCTTCCGTCTTCCCAACAACTGGTACTACATCTCACCAAGGCTCACCTTCCAATGCCTGGAGGACCTGGTGACTCATTATTCTGAAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
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| CDS TCA 90 bp | GCTGAAAAGGGATTCGTCCACTCTGAGTGGGTTCTCTGCTCCCTCTaGACCTTCTTGCAATCTGGATACCCTCTTCCAGTCAAAGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AEKGFVHSEWVLCSL*TFLQSGYPLPVKGL Trigger: AAGACCTTTGACTGGAAGAGGGTATCCAGATTGCAAGAAGGTTCAGAGGGAGCAGAGAACCCACTCAGAGTGGACGAATCCCTTTTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
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| CDS CCA 90 bp | TCCTTCAAACAGCCAGCCATGGTACACTCTGGCCACACATATCCCTaGAATATAACTTTCCCGGCCAGTGCTGAGAGAAATGGCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SFKQPAMVHSGHTYP*NITFPASAERNGFP Trigger: TGGAAAGCCATTTCTCTCAGCACTGGCCGGGAAAGTTATATTCCAGGGATATGTGTGGCCAGAGTGTACCATGGCTGGCTGTTTGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTTCCACATGGTCTCAGAGAAGGGCCATTTGGATTTCGAGTTGGAGTCAGTGTGATGGGTGGGATGTaGGAGCAGGTATGTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CFPHGLREGPFGFRVGVSVMGGM*EQVCSV Trigger: CACAGAACATACCTGCTCCAACATCCCACCCATCAC...ACTGACTCCAACTCGAAATCCAAATGGCCCTTCTCTGAGACCATGTGGAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS-3UTR CAA 90 bp | TCTCACAATCATCTATGGCAGCATTCAGCTTCTCCAGTTCCCCTTTCCCAGAAAGTGATGGGTGGGATGTaGGAGCAGGTATGTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SHNHLWQHSASPVPLSQKVMGGM*EQVCSV Trigger: CACAGAACATACCTGCTCCAACATCCCACCCATCAC...TTTCTGGGAAAGGGGAACTGGAGAAGCTGAATGCTGCCATAGATGATTGTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCATTCTGGAGCTAGGAAGTCATCTTCCCCATGTTCTTTCTCAGATGGAGTGATGGGTGGGATGTaGGAGCAGGTATGTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGHSGARKSSSPCSFSDGVMGGM*EQVCSV Trigger: CACAGAACATACCTGCTCCAACATCCCACCCATCAC...TCCATCTGAGAAAGAACATGGGGAAGATGACTTCCTAGCTCCAGAATGACCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168589.8 |
||
| CDS TCA 90 bp | CAGACAGCGAATAGAAACCTTTCTTTGTTTCACTCTCTCGAATCATaGAGCTACCAATCTTTGTATCTGGCAGCTGCAGCAGTTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QTANRNLSLFHSLES*SYQSLYLAAAAVPQ Trigger: CTGAGGAACTGCTGCAGCTGCCAGATACAAAGATTGGTAGCTTCATGATTCGAGAGAGTGAAACAAAGAAAGGTTTCTATTCGCTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
||
| CDS CAA 72 bp | GTGAACCAGGGCTGGTGCAAGGTGATGGGTGGGATGTaGGAGCAGGTATGTTCTGTGCCAGACAGGGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VNQGWCKVMGGM*EQVCSVPDRVW Trigger: CCACACCCTGTCTGGCACAGAACATACCTGCTCCAACATCCCACCCATCACCTTGCACCAGCCCTGGTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
||
| CDS GCA 72 bp | TTAGGGAGAGACTCTTCTTCTTCCGGTCGAAGGAGCTaGTGTCATCCCCTGTCAGGGACAGGTAAGAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LGRDSSSSGRRS*CHPLSGTGKRQ Trigger: TTGCCTCTTACCTGTCCCTGACAGGGGATGACAGCAGCTCCTTCGACCGGAAGAAGAAGAGTCTCTCCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
||
| CDS TCA 72 bp | GGATTCGTCCACTCTGAGTGGGTTCTCTGCTCCCTCTaGACCTTCTTGCAATCTGGATACCCTCTTCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GFVHSEWVLCSL*TFLQSGYPLPV Trigger: GACTGGAAGAGGGTATCCAGATTGCAAGAAGGTTCAGAGGGAGCAGAGAACCCACTCAGAGTGGACGAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
||
| CDS GCA 72 bp | CGAATCATGAAGCTACCAATCTTTGTATCTGGCAGCTaGAGCAGTTCCTCAGCCTTGTCCCTGCCCAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RIMKLPIFVSGS*SSSSALSLPSP Trigger: AGGACTGGGCAGGGACAAGGCTGAGGAACTGCTGCAGCTGCCAGATACAAAGATTGGTAGCTTCATGATTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
||
| CDS CCA 72 bp | TGCCCAGTCCTTCAAACAGCCAGCCATGGTACACTCTaGCCACACATATCCCTGGAATATAACTTTCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: CPVLQTASHGTL*PHISLEYNFPG Trigger: GCCGGGAAAGTTATATTCCAGGGATATGTGTGGCCAGAGTGTACCATGGCTGGCTGTTTGAAGGACTGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
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| CDS TCA 72 bp | CACATATCCCTGGAATATAACTTTCCCGGCCAGTGCTaGGAGAAATGGCTTTCCACCAGCCCCCTTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: HISLEYNFPGQC*EKWLSTSPLHQ Trigger: CTGATGAAGGGGGCTGGTGGAAAGCCATTTCTCTCAGCACTGGCCGGGAAAGTTATATTCCAGGGATATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
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| CDS TCA 72 bp | TTGGAGCAGGTATGTTCTGTGCCAGACAGGGTGTGGTaGGCACACAGCATAGACCATCAGCCACTTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: LEQVCSVPDRVW*AHSIDHQPLQN Trigger: ATTCTGAAGTGGCTGATGGTCTATGCTGTGTGCTCACCACACCCTGTCTGGCACAGAACATACCTGCTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
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| CDS CCA 72 bp | CAGCCAGCCATGGTACACTCTGGCCACACATATCCCTaGAATATAACTTTCCCGGCCAGTGCTGAGAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: QPAMVHSGHTYP*NITFPASAERN Trigger: ATTTCTCTCAGCACTGGCCGGGAAAGTTATATTCCAGGGATATGTGTGGCCAGAGTGTACCATGGCTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
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| CDS GCA 72 bp | ACTCTGAGTGGGTTCTCTGCTCCCTCTGAACCTTCTTaGAATCTGGATACCCTCTTCCAGTCAAAGGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TLSGFSAPSEPS*NLDTLFQSKVF Trigger: GAAGACCTTTGACTGGAAGAGGGTATCCAGATTGCAAGAAGGTTCAGAGGGAGCAGAGAACCCACTCAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
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| CDS CCA 72 bp | AGAAATTACACGCAGTTTCTCTCCTCTCCGGAATATTaGGGGGCTAATGTCAGGAGATGGGTAGTCAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: RNYTQFLSSPEY*GANVRRWVVSQ Trigger: CTGACTGACTACCCATCTCCTGACATTAGCCCCCCAATATTCCGGAGAGGAGAGAAACTGCGTGTAATTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
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| CDS TCA 72 bp | AATAGAAACCTTTCTTTGTTTCACTCTCTCGAATCATaGAGCTACCAATCTTTGTATCTGGCAGCTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: NRNLSLFHSLES*SYQSLYLAAAA Trigger: TGCTGCAGCTGCCAGATACAAAGATTGGTAGCTTCATGATTCGAGAGAGTGAAACAAAGAAAGGTTTCTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100572.10 ENSMUST00000164163.8 ENSMUST00000168522.2 ENSMUST00000168589.8 |
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