Pregenerated sensors for SKP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054115Ensembl transcript IDs: ENSMUST00000096482.10, ENSMUST00000110585.10, ENSMUST00000190131.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGAGCTTCGTGCAGCAGCTCTGGGAGGCGCCTCCTGGCCATCCATaGAGGAGGCAGGATGAGACCCCACCACAAAAACCCATCACTGCC | + |
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Preference number: 1 (lower is better) Translates to: GSFVQQLWEAPPGHP*RRQDETPPQKPITA Trigger: GGCAGTGATGGGTTTTTGTGGTGGGGTCTCATCCTGCCTCCTGCATGGATGGCCAGGAGGCGCCTCCCAGAGCTGCTGCACGAAGCTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR GCA 90 bp | GCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTaGGGTAAGCACTTCATAGACAACTGGGCTTTTGCAGAGTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: ADLLPAFLVPEETPP*GKHFIDNWAFAESV Trigger: GACTGACTCTGCAAAAGCCCAGTTGTCTATGAAGTGCTTACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR TCA 90 bp | AGCTCACAGCTGGACTTGCGTAAGGAAGAACAGGTACTGTATGTCTaGGGGCATCTGGAGGCCAGAGCCCGCCATCAGCCCATCACTAAT | + |
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Preference number: 1 (lower is better) Translates to: SSQLDLRKEEQVLYV*GHLEARARHQPITN Trigger: ATTAGTGATGGGCTGATGGCGGGCTCTGGCCTCCAGATGCCCTCAGACATACAGTACCTGTTCTTCCTTACGCAAGTCCAGCTGTGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
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| 3UTR CCA 90 bp | TACAGTGTCCATGCTACTCACCTGTCTGCACTGATGCCCCCTGAATaGCTGAAAGCAGATGGTTTGTTAGATCTGAGGCCCATCTGTGCC | + |
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Preference number: 1 (lower is better) Translates to: YSVHATHLSALMPPE*LKADGLLDLRPICA Trigger: GGCACAGATGGGCCTCAGATCTAACAAACCATCTGCTTTCAGCCATTCAGGGGGCATCAGTGCAGACAGGTGAGTAGCATGGACACTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR CCA 90 bp | AAATTGAGCTGGAATTTGCCACCTTTCTTAGTCCACATAGCTCTCTaGAAGGTCTGCTGTGATACGGGAGCTAGCAAGCCAGACATGGTC | + |
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Preference number: 1 (lower is better) Translates to: KLSWNLPPFLVHIAL*KVCCDTGASKPDMV Trigger: GACCATGTCTGGCTTGCTAGCTCCCGTATCACAGCAGACCTTCCAGAGAGCTATGTGGACTAAGAAAGGTGGCAAATTCCAGCTCAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR GCA 90 bp | ATGTATTACCGCGACATGTTGGCAAAAATAGCTCACAGCTGGACTTaGGTAAGGAAGAACAGGTACTGTATGTCTGAGGGCATCTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: MYYRDMLAKIAHSWT*VRKNRYCMSEGIWR Trigger: CCTCCAGATGCCCTCAGACATACAGTACCTGTTCTTCCTTACGCAAGTCCAGCTGTGAGCTATTTTTGCCAACATGTCGCGGTAATACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
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| 3UTR CCA 90 bp | TGCGACATGTATTACCGCGACATGTTGGCAAAAATAGCTCACAGCTaGACTTGCGTAAGGAAGAACAGGTACTGTATGTCTGAGGGCATC | + |
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Preference number: 1 (lower is better) Translates to: CDMYYRDMLAKIAHS*TCVRKNRYCMSEGI Trigger: GATGCCCTCAGACATACAGTACCTGTTCTTCCTTACGCAAGTCCAGCTGTGAGCTATTTTTGCCAACATGTCGCGGTAATACATGTCGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
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| 3UTR GCA 90 bp | ACACTTTCTGGGTTTTGGTGCCGATTCTTTTTAAACAGGTCTGTATaGCCAGCTTCATCTCCCTGGTCTGTGTTTGTTCTAGGTTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: TLSGFWCRFFLNRSV*PASSPWSVFVLGWD Trigger: GTCCCAACCTAGAACAAACACAGACCAGGGAGATGAAGCTGGGCATACAGACCTGTTTAAAAAGAATCGGCACCAAAACCCAGAAAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR CCA 90 bp | TGCCGATTCTTTTTAAACAGGTCTGTATGCCCAGCTTCATCTCCCTaGTCTGTGTTTGTTCTAGGTTGGGACATAGTGCAAAGTCGAAGG | + |
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Preference number: 1 (lower is better) Translates to: CRFFLNRSVCPASSP*SVFVLGWDIVQSRR Trigger: CCTTCGACTTTGCACTATGTCCCAACCTAGAACAAACACAGACCAGGGAGATGAAGCTGGGCATACAGACCTGTTTAAAAAGAATCGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR GCA 90 bp | CCATCTTTGAACTTCTGGAATGTAGAAACAAACAAAGAACTGCCATaGACTGTAGACGAGGTTACACCCATCACCACTAAAGAGGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: PSLNFWNVETNKELP*TVDEVTPITTKEES Trigger: GCTCTCCTCTTTAGTGGTGATGGGTGTAACCTCGTCTACAGTGCATGGCAGTTCTTTGTTTGTTTCTACATTCCAGAAGTTCAAAGATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR TCA 90 bp | AGCTATTTTTCAGTGTGTTTCCGGCTGCTGTGTGGACAGTGTCCTTaGGACACACTGGTATTTCTATTAAGAACTTCTGATGTGTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: SYFSVCFRLLCGQCP*DTLVFLLRTSDVFL Trigger: GAGGAACACATCAGAAGTTCTTAATAGAAATACCAGTGTGTCTCAAGGACACTGTCCACACAGCAGCCGGAAACACACTGAAAAATAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR GCA 90 bp | CTTTGGGTCCAGAACCAAGCCTGTGCGTTTCATTCAGGGCGGCTCCCGTGGAACCCTCCTGGCCATCCATaGAGGAGGCAGGATGAGACC | + |
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Preference number: 2 (lower is better) Translates to: LWVQNQACAFHSGRLPWNPPGHP*RRQDET Trigger: GGTCTCATCCTGCCTCCTGCATGGATGGCCAGGAGG...GTTCCACGGGAGCCGCCCTGAATGAAACGCACAGGCTTGGTTCTGGACCCAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR CCA 90 bp | ACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGTAAGCACTATGTCTGAGGGCATCTaGAGGCCAGAGCCCGCCATC | + |
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Preference number: 2 (lower is better) Translates to: TCCLLSSFQRKHRPAVSTMSEGI*RPEPAI Trigger: GATGGCGGGCTCTGGCCTCCAGATGCCCTCAGACAT...AGTGCTTACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
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| 3UTR-3UTR GCA 90 bp | ACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGTAAGCACTCGTGCTCTCTGTGGGTaGCCCAGAGGAAAAAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: TCCLLSSFQRKHRPAVSTRALCG*PRGKSL Trigger: GAGGCTTTTTCCTCTGGGGCACCCACAGAGAGCACG...AGTGCTTACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR CAA 90 bp | GGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTaGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGT | + |
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Preference number: 2 (lower is better) Translates to: GKANRKSNQGLQHAD*LPAFLVPEETPPCG Trigger: ACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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| 3UTR-3UTR GCA 90 bp | AACAGGTACTGTATGTCTGAGGGCATCTGGAGGCCAGAGCCCGCCATCAGCCCAGTGCATTGGCTACAATaGCGGAAAACCAGTCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: NRYCMSEGIWRPEPAISPVHWLQ*RKTSQG Trigger: CCCCTGACTGGTTTTCCGGCATTGTAGCCAATGCAC...TGGGCTGATGGCGGGCTCTGGCCTCCAGATGCCCTCAGACATACAGTACCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR GCA 90 bp | ACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGTAAGCACTGCTCTCTGGAAGGTCTaGTGTGATACGGGAGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: TCCLLSSFQRKHRPAVSTALWKV*CDTGAS Trigger: GCTAGCTCCCGTATCACAGCAGACCTTCCAGAGAGC...AGTGCTTACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR TCA 90 bp | CCCAGAAAAGACCACCTCAAATGCTACCAGCCTCTGCTGCTTTCCGCCCAGCTCGGCCAGCTTAGGGAATaGATGGTGAGACTTGATCTC | + |
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Preference number: 2 (lower is better) Translates to: PRKDHLKCYQPLLLSAQLGQLRE*MVRLDL Trigger: GAGATCAAGTCTCACCATTCATTCCCTAAGCTGGCC...GAGCTGGGCGGAAAGCAGCAGAGGCTGGTAGCATTTGAGGTGGTCTTTTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR GCA 90 bp | TCTCCTAAAATCTCCAAAGACCTGCCGCTTAGGCCCTTAGGGCACAGCACTGACTGCGGACTTGCTGCCTaGTTTCCTCGTTCCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SPKISKDLPLRPLGHSTDCGLAA*FPRSRG Trigger: TCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCA...GTCAGTGCTGTGCCCTAAGGGCCTAAGCGGCAGGTCTTTGGAGATTTTAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCCGCTTAGGCCCTTAGGGCACAGCACTGACAGAATCGGCTCTATAGTTTTGTGCGGACTTGCTGCCTaGTTTCCTCGTTCCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LPLRPLGHSTDRIGSIVLCGLAA*FPRSRG Trigger: TCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCA...CAAAACTATAGAGCCGATTCTGTCAGTGCTGTGCCCTAAGGGCCTAAGCGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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| 3UTR-3UTR GCA 90 bp | AACAGGTACTGTATGTCTGAGGGCATCTGGAGGCCAGAGCCCGCCATCAGCCCAAAAGACCACCTCAAATaGTACCAGCCTCTGCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: NRYCMSEGIWRPEPAISPKDHLK*YQPLLL Trigger: AAGCAGCAGAGGCTGGTAGCATTTGAGGTGGTCTTT...TGGGCTGATGGCGGGCTCTGGCCTCCAGATGCCCTCAGACATACAGTACCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
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| 3UTR-3UTR CCA 90 bp | CCAGACCTGACCCGACCTTTGGGTCCAGAACCAAGCCTGTGCGTTTCATTCAGGCTGATGCCCCCTGAATaGCTGAAAGCAGATGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: PDLTRPLGPEPSLCVSFRLMPPE*LKADGL Trigger: CAAACCATCTGCTTTCAGCCATTCAGGGGGCATCAG...CCTGAATGAAACGCACAGGCTTGGTTCTGGACCCAAAGGTCGGGTCAGGTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR CCA 90 bp | CTTTGGGTCCAGAACCAAGCCTGTGCGTTTCATTCAGGGCGGCTCCCGTGGAACCCAGCTTCATCTCCCTaGTCTGTGTTTGTTCTAGGT | + |
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Preference number: 2 (lower is better) Translates to: LWVQNQACAFHSGRLPWNPASSP*SVFVLG Trigger: ACCTAGAACAAACACAGACCAGGGAGATGAAGCTGG...GTTCCACGGGAGCCGCCCTGAATGAAACGCACAGGCTTGGTTCTGGACCCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR GCA 90 bp | CCAGACCTGACCCGACCTTTGGGTCCAGAACCAAGCCTGTGCGTTTCATTCAGGCATGCACTCCTGTGCTaGTGTGAAACTAACCTCATG | + |
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Preference number: 2 (lower is better) Translates to: PDLTRPLGPEPSLCVSFRHALLC*CETNLM Trigger: CATGAGGTTAGTTTCACAGCAGCACAGGAGTGCATG...CCTGAATGAAACGCACAGGCTTGGTTCTGGACCCAAAGGTCGGGTCAGGTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR CCA 90 bp | CTTTGGGTCCAGAACCAAGCCTGTGCGTTTCATTCAGGGCGGCTCCCGTGGAACATGGCTGAAAGCAGATaGTTTGTTAGATCTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LWVQNQACAFHSGRLPWNMAESR*FVRSEA Trigger: GGCCTCAGATCTAACAAACCATCTGCTTTCAGCCAT...GTTCCACGGGAGCCGCCCTGAATGAAACGCACAGGCTTGGTTCTGGACCCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR GCA 90 bp | AACAGGTACTGTATGTCTGAGGGCATCTGGAGGCCAGAGCCCGCCATCAGCCCAGTGAAACTAACCTCATaGCTGCACAGAGTTGAAATG | + |
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Preference number: 2 (lower is better) Translates to: NRYCMSEGIWRPEPAISPVKLTS*LHRVEM Trigger: CATTTCAACTCTGTGCAGGCATGAGGTTAGTTTCAC...TGGGCTGATGGCGGGCTCTGGCCTCCAGATGCCCTCAGACATACAGTACCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
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| 3UTR-3UTR TCA 90 bp | ACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGTAAGCACTAGGAAGACTTTGGAATaGAGTAAGCAATGCCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: TCCLLSSFQRKHRPAVSTRKTLE*SKQCLH Trigger: ATGCAGGCATTGCTTACTTCATTCCAAAGTCTTCCT...AGTGCTTACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR GCA 90 bp | CCCAGAAAAGACCACCTCAAATGCTACCAGCCTCTGCTGCTTTCCGCCCAGCTCGTGAAACTAACCTCATaGCTGCACAGAGTTGAAATG | + |
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Preference number: 2 (lower is better) Translates to: PRKDHLKCYQPLLLSAQLVKLTS*LHRVEM Trigger: CATTTCAACTCTGTGCAGGCATGAGGTTAGTTTCAC...GAGCTGGGCGGAAAGCAGCAGAGGCTGGTAGCATTTGAGGTGGTCTTTTCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
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| 3UTR-3UTR GCA 90 bp | GCCTTTGAGGTTTTCAATCCTGCACCAATCCTGTCCTGCTTCCGGCTGTGTCTCCATGCACTCCTGTGCTaGTGTGAAACTAACCTCATG | + |
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Preference number: 2 (lower is better) Translates to: AFEVFNPAPILSCFRLCLHALLC*CETNLM Trigger: CATGAGGTTAGTTTCACAGCAGCACAGGAGTGCATG...GAGACACAGCCGGAAGCAGGACAGGATTGGTGCAGGATTGAAAACCTCAAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
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| 3UTR-3UTR TCA 90 bp | TACATCATGCACTCCTGTGCTGCTGTGAAACTAACCTCATGCCTGCACAGAGTTCTTAGGGCACAGCACTaGCAGAATCGGCTCTATAGT | + |
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Preference number: 2 (lower is better) Translates to: YIMHSCAAVKLTSCLHRVLRAQH*QNRLYS Trigger: ACTATAGAGCCGATTCTGTCAGTGCTGTGCCCTAAG...AACTCTGTGCAGGCATGAGGTTAGTTTCACAGCAGCACAGGAGTGCATGATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
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| 3UTR-3UTR TCA 90 bp | CCAGACCTGACCCGACCTTTGGGTCCAGAACCAAGCCTGTGCGTTTCATTCAGGTTAGGGAATGAATGGTaGGACTTGATCTCAAAAACA | + |
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Preference number: 2 (lower is better) Translates to: PDLTRPLGPEPSLCVSFRLGNEW*DLISKT Trigger: TGTTTTTGAGATCAAGTCTCACCATTCATTCCCTAA...CCTGAATGAAACGCACAGGCTTGGTTCTGGACCCAAAGGTCGGGTCAGGTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR TCA 90 bp | GCCTTTGAGGTTTTCAATCCTGCACCAATCCTGTCCTGCTTCCGGCTGTGTCTCGCCATGATCTTTCTTTaGACTATGCACTCTCAACAG | + |
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Preference number: 2 (lower is better) Translates to: AFEVFNPAPILSCFRLCLAMIFL*TMHSQQ Trigger: CTGTTGAGAGTGCATAGTTCAAAGAAAGATCATGGC...GAGACACAGCCGGAAGCAGGACAGGATTGGTGCAGGATTGAAAACCTCAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR GCA 90 bp | AGTTGGCCTTGCAATGGTGGTGAAATAGGCGCAGTTAATCTGCAGCCGAGGAAGACAAAAACCCATCACTaGCTCTTGTGTGCATTGGCT | + |
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Preference number: 2 (lower is better) Translates to: SWPCNGGEIGAVNLQPRKTKTHH*LLCALA Trigger: AGCCAATGCACACAAGAGGCAGTGATGGGTTTTTGT...CTTCCTCGGCTGCAGATTAACTGCGCCTATTTCACCACCATTGCAAGGCCAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR CAA 90 bp | GTCTGTATGCCCAGCTTCATCTCCCTGGTCTGTGTTTGTTCTAGGTaGGGACATAGTGCAAAGTCGAAGGACAGGGAATGTTTATTTTGG | + |
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Preference number: 2 (lower is better) Translates to: VCMPSFISLVCVCSR*GHSAKSKDRECLFW Trigger: CCAAAATAAACATTCCCTGTCCTTCGACTTTGCACTATGTCCCAACCTAGAACAAACACAGACCAGGGAGATGAAGCTGGGCATACAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR TCA 90 bp | CTGCCGCTTAGGCCCTTAGGGCACAGCACTGACAGAATCGGCTCTATAGTTTTGAACATACATATAAAGTaGAGGCTAAGGCAAAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: LPLRPLGHSTDRIGSIVLNIHIK*RLRQSQ Trigger: TTGGCTTTGCCTTAGCCTTCACTTTATATGTATGTT...CAAAACTATAGAGCCGATTCTGTCAGTGCTGTGCCCTAAGGGCCTAAGCGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTCTCCTAAAATCTCCAAAGACCTGCCGCTTAGGCCCTTAGGGCACAGCACTTCGATTCAGGATTACTaGACATTCTGTGAACTATTT | + |
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Preference number: 2 (lower is better) Translates to: GSPKISKDLPLRPLGHSTSIQDY*TFCELF Trigger: AAATAGTTCACAGAATGTCCAGTAATCCTGAATCGA...AGTGCTGTGCCCTAAGGGCCTAAGCGGCAGGTCTTTGGAGATTTTAGGAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR TCA 90 bp | AGTTGGCCTTGCAATGGTGGTGAAATAGGCGCAGTTAATCTGCAGCCGAGGAAGAACATACATATAAAGTaGAGGCTAAGGCAAAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: SWPCNGGEIGAVNLQPRKNIHIK*RLRQSQ Trigger: TTGGCTTTGCCTTAGCCTTCACTTTATATGTATGTT...CTTCCTCGGCTGCAGATTAACTGCGCCTATTTCACCACCATTGCAAGGCCAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR CCA 90 bp | AGTTGGCCTTGCAATGGTGGTGAAATAGGCGCAGTTAATCTGCAGCCGAGGAAGACACTTTCTGGGTTTTaGTGCCGATTCTTTTTAAAC | + |
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Preference number: 2 (lower is better) Translates to: SWPCNGGEIGAVNLQPRKTLSGF*CRFFLN Trigger: GTTTAAAAAGAATCGGCACCAAAACCCAGAAAGTGT...CTTCCTCGGCTGCAGATTAACTGCGCCTATTTCACCACCATTGCAAGGCCAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR TCA 90 bp | TACATCATGCACTCCTGTGCTGCTGTGAAACTAACCTCATGCCTGCACAGAGTTAACATACATATAAAGTaGAGGCTAAGGCAAAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: YIMHSCAAVKLTSCLHRVNIHIK*RLRQSQ Trigger: TTGGCTTTGCCTTAGCCTTCACTTTATATGTATGTT...AACTCTGTGCAGGCATGAGGTTAGTTTCACAGCAGCACAGGAGTGCATGATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
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| 3UTR-3UTR CCA 90 bp | GAAATGTGTTGGCTTATAAGGGGCATCGAGTTCAGGAGGTCACAAGAGATCAAACTAGAATTCTGCATTTaGGGATTTGTATCAGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: EMCWLIRGIEFRRSQEIKLEFCI*GFVSEF Trigger: GAACTCTGATACAAATCCCCAAATGCAGAATTCTAG...TTTGATCTCTTGTGACCTCCTGAACTCGATGCCCCTTATAAGCCAACACATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR GCA 72 bp | GTGCAGCAGCTCTGGGAGGCGCCTCCTGGCCATCCATaGAGGAGGCAGGATGAGACCCCACCACAAAAACCC | + |
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Preference number: 3 (lower is better) Translates to: VQQLWEAPPGHP*RRQDETPPQKP Trigger: GGGTTTTTGTGGTGGGGTCTCATCCTGCCTCCTGCATGGATGGCCAGGAGGCGCCTCCCAGAGCTGCTGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR GCA 72 bp | AAAAGCGAGTGTTGGCAGATGGCAGAGGGAGCTTCGTaGAGCAGCTCTGGGAGGCGCCTCCTGGCCATCCAT | + |
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Preference number: 3 (lower is better) Translates to: KSECWQMAEGAS*SSSGRRLLAIH Trigger: ATGGATGGCCAGGAGGCGCCTCCCAGAGCTGCTGCACGAAGCTCCCTCTGCCATCTGCCAACACTCGCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR-3UTR CAA 90 bp | CTTTGGGTCCAGAACCAAGCCTGTGCGTTTCATTCAGGGCGGCTCCCGTGGAACTGTTTCCCACTCACATaGGGCATGCCTTCCGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: LWVQNQACAFHSGRLPWNCFPLT*GMPSVL Trigger: GAGCACGGAAGGCATGCCCAATGTGAGTGGGAAACA...GTTCCACGGGAGCCGCCCTGAATGAAACGCACAGGCTTGGTTCTGGACCCAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR GCA 72 bp | GACCTGACCCGACCTTTGGGTCCAGAACCAAGCCTGTaGGTTTCATTCAGGGCGGCTCCCGTGGAACTATGT | + |
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Preference number: 3 (lower is better) Translates to: DLTRPLGPEPSL*VSFRAAPVELC Trigger: ACATAGTTCCACGGGAGCCGCCCTGAATGAAACGCACAGGCTTGGTTCTGGACCCAAAGGTCGGGTCAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| 3UTR GCA 72 bp | GGAGATGTTTCCCACTCACATTGGGCATGCCTTCCGTaGTCTCTGTGGGTGCCCCAGAGGAAAAAGCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GDVSHSHWACLP*SLWVPQRKKPP Trigger: AGGAGGCTTTTTCCTCTGGGGCACCCACAGAGAGCACGGAAGGCATGCCCAATGTGAGTGGGAAACATCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR CCA 72 bp | TCCCACTCACATTGGGCATGCCTTCCGTGCTCTCTGTaGGTGCCCCAGAGGAAAAAGCCTCCTTCACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: SHSHWACLPCSL*VPQRKKPPSQT Trigger: TGTCTGTGAAGGAGGCTTTTTCCTCTGGGGCACCCACAGAGAGCACGGAAGGCATGCCCAATGTGAGTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR TCA 72 bp | GAACTATGCACTCTCAACAGAGGCCACCCACAGACCTaGTGGCGGCTTAACAATGGTTCACCGAGGCCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: ELCTLNRGHPQT*WRLNNGSPRPC Trigger: GCAAGGCCTCGGTGAACCATTGTTAAGCCGCCATCAGGTCTGTGGGTGGCCTCTGTTGAGAGTGCATAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR CCA 72 bp | AGAAGAAGCTCGGTGGGAGTAAGGAAAAGCGAGTGTTaGCAGATGGCAGAGGGAGCTTCGTGCAGCAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RRSSVGVRKSEC*QMAEGASCSSS Trigger: AGAGCTGCTGCACGAAGCTCCCTCTGCCATCTGCCAACACTCGCTTTTCCTTACTCCCACCGAGCTTCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR-3UTR CAA 90 bp | CCAGACCTGACCCGACCTTTGGGTCCAGAACCAAGCCTGTGCGTTTCATTCAGGACCCATCACTGCCTCTaGTGTGCATTGGCTACAATG | + |
|
Preference number: 3 (lower is better) Translates to: PDLTRPLGPEPSLCVSFRTHHCL*CALATM Trigger: CATTGTAGCCAATGCACACAAGAGGCAGTGATGGGT...CCTGAATGAAACGCACAGGCTTGGTTCTGGACCCAAAGGTCGGGTCAGGTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR GCA 72 bp | CTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTaGGGTAAGCACTTCATAGACAACTGGGCTTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LPAFLVPEETPP*GKHFIDNWAFA Trigger: TGCAAAAGCCCAGTTGTCTATGAAGTGCTTACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGAAAAGACCACCTCAAATGCTACCAGCCTCTGCTGCTTTCCGCCCAGCTCATCTCCAGGTTCTTCTaGCTGTCCATAGTTGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PRKDHLKCYQPLLLSAQLISRFF*LSIVGL Trigger: AAGGCCAACTATGGACAGCAAGAAGAACCTGGAGAT...GAGCTGGGCGGAAAGCAGCAGAGGCTGGTAGCATTTGAGGTGGTCTTTTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR CCA 72 bp | CATGCTACTCACCTGTCTGCACTGATGCCCCCTGAATaGCTGAAAGCAGATGGTTTGTTAGATCTGAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: HATHLSALMPPE*LKADGLLDLRP Trigger: GGGCCTCAGATCTAACAAACCATCTGCTTTCAGCCATTCAGGGGGCATCAGTGCAGACAGGTGAGTAGCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGGGTCCAGAACCAAGCCTGTGCGTTTCATTCAGGGCGGCTCCCGTGGAACTTTTACTACCGAGTTTaGGCCTGTGCTTTTTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: LWVQNQACAFHSGRLPWNFYYRV*ACAFSP Trigger: TGGTGAAAAAGCACAGGCCAAAACTCGGTAGTAAAA...GTTCCACGGGAGCCGCCCTGAATGAAACGCACAGGCTTGGTTCTGGACCCAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR-3UTR CAA 90 bp | ACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGTAAGCACTCAGGGAATGTTTATTTaGGAAATTCAGCAACCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TCCLLSSFQRKHRPAVSTQGMFI*EIQQPP Trigger: TGGGGGTTGCTGAATTTCCAAAATAAACATTCCCTG...AGTGCTTACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR TCA 72 bp | GGAGAGCAGTCCCTAGTACAACTCCTATGTGACATCTaGGAATGGGGACACTTGGGAGAATTCAGGTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GEQSLVQLLCDI*EWGHLGEFRFW Trigger: CCAGAACCTGAATTCTCCCAAGTGTCCCCATTCTCAGATGTCACATAGGAGTTGTACTAGGGACTGCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR TCA 72 bp | GAGGCTCCATGGTCATCCCATTACCCCTCTAGTGTATaGATGGTAGAGGTAAGCACCACACTGTCTACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: EAPWSSHYPSSV*MVEVSTTLSTA Trigger: TGCAGTAGACAGTGTGGTGCTTACCTCTACCATTCATACACTAGAGGGGTAATGGGATGACCATGGAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR TCA 72 bp | TGTCCATGCTACTCACCTGTCTGCACTGATGCCCCCTaGATGGCTGAAAGCAGATGGTTTGTTAGATCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: CPCYSPVCTDAP*MAESRWFVRSE Trigger: CTCAGATCTAACAAACCATCTGCTTTCAGCCATTCAGGGGGCATCAGTGCAGACAGGTGAGTAGCATGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR TCA 72 bp | TTAATCTGCAGCCGAGGAAGAGCTTCCCTCAGTAGCTaGAGGGTTCCCTCTGGCACGATTCCAAAAACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LICSRGRASLSS*RVPSGTIPKTC Trigger: ACAAGTTTTTGGAATCGTGCCAGAGGGAACCCTTCAGCTACTGAGGGAAGCTCTTCCTCGGCTGCAGATTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR GCA 72 bp | CGCGACATGTTGGCAAAAATAGCTCACAGCTGGACTTaGGTAAGGAAGAACAGGTACTGTATGTCTGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RDMLAKIAHSWT*VRKNRYCMSEG Trigger: GCCCTCAGACATACAGTACCTGTTCTTCCTTACGCAAGTCCAGCTGTGAGCTATTTTTGCCAACATGTCGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
||
| 3UTR CCA 72 bp | TGGAATTTGCCACCTTTCTTAGTCCACATAGCTCTCTaGAAGGTCTGCTGTGATACGGGAGCTAGCAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: WNLPPFLVHIAL*KVCCDTGASKP Trigger: TGGCTTGCTAGCTCCCGTATCACAGCAGACCTTCCAGAGAGCTATGTGGACTAAGAAAGGTGGCAAATTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR CCA 72 bp | TACAACTCCTATGTGACATCTGAGAATGGGGACACTTaGGAGAATTCAGGTTCTGGGATATCCAGGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: YNSYVTSENGDT*ENSGSGISRQP Trigger: TGGCTGCCTGGATATCCCAGAACCTGAATTCTCCCAAGTGTCCCCATTCTCAGATGTCACATAGGAGTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR CCA 72 bp | CCAGCTTCATCTCCCTGGTCTGTGTTTGTTCTAGGTTaGGACATAGTGCAAAGTCGAAGGACAGGGAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: PASSPWSVFVLG*DIVQSRRTGNV Trigger: AACATTCCCTGTCCTTCGACTTTGCACTATGTCCCAACCTAGAACAAACACAGACCAGGGAGATGAAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR TCA 72 bp | CACATGGAAGTTAGGTATCTGGCCATGATCTTTCTTTaGACTATGCACTCTCAACAGAGGCCACCCACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: HMEVRYLAMIFL*TMHSQQRPPTD Trigger: GTCTGTGGGTGGCCTCTGTTGAGAGTGCATAGTTCAAAGAAAGATCATGGCCAGATACCTAACTTCCATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR GCA 72 bp | TGTATGAATGGTAGAGGTAAGCACCACACTGTCTACTaGATGTGGTGGGGTACAAGATGCAGAGTAAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: CMNGRGKHHTVY*MWWGTRCRVSW Trigger: CCAACTTACTCTGCATCTTGTACCCCACCACATGCAGTAGACAGTGTGGTGCTTACCTCTACCATTCATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR CCA 72 bp | AGGTCTGCTGTGATACGGGAGCTAGCAAGCCAGACATaGTCAACATTTCACTGTGATGTAACACATGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: RSAVIRELASQT*STFHCDVTHGS Trigger: ACTTCCATGTGTTACATCACAGTGAAATGTTGACCATGTCTGGCTTGCTAGCTCCCGTATCACAGCAGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR GCA 72 bp | GGGTTTTGGTGCCGATTCTTTTTAAACAGGTCTGTATaGCCAGCTTCATCTCCCTGGTCTGTGTTTGTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GFWCRFFLNRSV*PASSPWSVFVL Trigger: TAGAACAAACACAGACCAGGGAGATGAAGCTGGGCATACAGACCTGTTTAAAAAGAATCGGCACCAAAACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR CCA 72 bp | TATTACCGCGACATGTTGGCAAAAATAGCTCACAGCTaGACTTGCGTAAGGAAGAACAGGTACTGTATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: YYRDMLAKIAHS*TCVRKNRYCMS Trigger: AGACATACAGTACCTGTTCTTCCTTACGCAAGTCCAGCTGTGAGCTATTTTTGCCAACATGTCGCGGTAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
||
| 3UTR CCA 72 bp | CATGAGCTATTTTTCAGTGTGTTTCCGGCTGCTGTGTaGACAGTGTCCTTGAGACACACTGGTATTTCTATT | + |
|
Preference number: 3 (lower is better) Translates to: HELFFSVFPAAV*TVSLRHTGISI Trigger: AATAGAAATACCAGTGTGTCTCAAGGACACTGTCCACACAGCAGCCGGAAACACACTGAAAAATAGCTCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR CCA 72 bp | TTTTTAAACAGGTCTGTATGCCCAGCTTCATCTCCCTaGTCTGTGTTTGTTCTAGGTTGGGACATAGTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FLNRSVCPASSP*SVFVLGWDIVQ Trigger: TTGCACTATGTCCCAACCTAGAACAAACACAGACCAGGGAGATGAAGCTGGGCATACAGACCTGTTTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR-3UTR CAA 90 bp | CATAGACCAGTTCTTCTCACCTCTTCTTACGATCCGAGATGCCCATCATTAGATTCTTTCCTGGGCATTTaGTGGCACATCAATATCAAT | + |
|
Preference number: 3 (lower is better) Translates to: HRPVLLTSSYDPRCPSLDSFLGI*WHININ Trigger: ATTGATATTGATGTGCCACAAAATGCCCAGGAAAGA...ATCTAATGATGGGCATCTCGGATCGTAAGAAGAGGTGAGAAGAACTGGTCTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR GCA 72 bp | AACTTCTGGAATGTAGAAACAAACAAAGAACTGCCATaGACTGTAGACGAGGTTACACCCATCACCACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: NFWNVETNKELP*TVDEVTPITTK Trigger: TTTAGTGGTGATGGGTGTAACCTCGTCTACAGTGCATGGCAGTTCTTTGTTTGTTTCTACATTCCAGAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR CCA 72 bp | ATATGTAGTCAAATAAAGCCGGTTTGTATTGTCACTTaGCTGCCAATGGCTCAGCCTTCCAGCATATTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: ICSQIKPVCIVT*LPMAQPSSIFY Trigger: ATAGAATATGCTGGAAGGCTGAGCCATTGGCAGCCAAGTGACAATACAAACCGGCTTTATTTGACTACATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR TCA 72 bp | TCCTTGAGACACACTGGTATTTCTATTAAGAACTTCTaGTGTGTTCCTCACCTCAAAGACACTAGAAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: SLRHTGISIKNF*CVPHLKDTRRS Trigger: GGATCTTCTAGTGTCTTTGAGGTGAGGAACACATCAGAAGTTCTTAATAGAAATACCAGTGTGTCTCAAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR GCA 72 bp | CCTGGGCATTTTGTGGCACATCAATATCAATGTTCATaGTTTGAACATGTATTCATCCATCTAAAGATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PGHFVAHQYQCS*FEHVFIHLKMD Trigger: ATCCATCTTTAGATGGATGAATACATGTTCAAAGCATGAACATTGATATTGATGTGCCACAAAATGCCCAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR CCA 72 bp | TGTGAACTATTTCGATATTCTTTCCTGGGCATTTTGTaGCACATCAATATCAATGTTCATGCTTTGAACATG | + |
|
Preference number: 3 (lower is better) Translates to: CELFRYSFLGIL*HININVHALNM Trigger: CATGTTCAAAGCATGAACATTGATATTGATGTGCCACAAAATGCCCAGGAAAGAATATCGAAATAGTTCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| 3UTR TCA 72 bp | TGTACACTTTTATTTGGTGTAAGGAAGACTTTGGAATaGAGTAAGCAATGCCTGCATGAGATTCTTAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: CTLLFGVRKTLE*SKQCLHEILNF Trigger: AAAGTTAAGAATCTCATGCAGGCATTGCTTACTTCATTCCAAAGTCTTCCTTACACCAAATAAAAGTGTACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| CDS-3UTR TCA 90 bp | GACCTTTGGGTCCAGAACCAAGCCTGTGCGTTTCATTCAGGGCGGCTCCCGTGGGGGGTGGCCGAGGTTTaGGAGCAGTCCATGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DLWVQNQACAFHSGRLPWGVAEV*EQSMWD Trigger: ATCCCACATGGACTGCTCTCAAACCTCGGCCACCCC...CCACGGGAGCCGCCCTGAATGAAACGCACAGGCTTGGTTCTGGACCCAAAGGTC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| CDS-3UTR TCA 90 bp | GACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGTAAGCACGGGGTGGCCGAGGTTTaGGAGCAGTCCATGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DLLPAFLVPEETPPCGKHGVAEV*EQSMWD Trigger: ATCCCACATGGACTGCTCTCAAACCTCGGCCACCCC...GTGCTTACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR GCA 90 bp | GCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGATGGGGTCTGAGAGCTaGAGGCCTTCCAGGCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ACGLAACFPRSRGNTALRMGSES*RPSRLR Trigger: TCTAAGCCTGGAAGGCCTGCAGCTCTCAGACCCCAT...CCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGGTCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACGGAGGGCTCTGGGGGTaGCCGAGGTTTGAGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRSPACGLAACFPRSRGNGGLWG*PRFESS Trigger: ACTGCTCTCAAACCTCGGCCACCCCCAGAGCCCTCC...GTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGGTCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACGGGGTGGCCGAGGTTTaGGAGCAGTCCATGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PRSPACGLAACFPRSRGNGVAEV*EQSMWD Trigger: ATCCCACATGGACTGCTCTCAAACCTCGGCCACCCC...GTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | AACAGGTACTGTATGTCTGAGGGCATCTGGAGGCCAGAGCCCGCCATCAGCCCACTTGACAATGGGGTCTaGGAGCTGCAGGCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NRYCMSEGIWRPEPAISPLDNGV*ELQAFQ Trigger: CTGGAAGGCCTGCAGCTCTCAGACCCCATTGTCAAG...TGGGCTGATGGCGGGCTCTGGCCTCCAGATGCCCTCAGACATACAGTACCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
||
| CDS-3UTR GCA 90 bp | GCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGTCCAGGCTTAGATTCTaGAGCTTGGAGCACTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ACGLAACFPRSRGNTALRSRLRF*SLEHSD Trigger: GTCCGAGTGCTCCAAGCTGCAGAATCTAAGCCTGGA...CCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCTCCTAAAATCTCCAAAGACCTGCCGCTTAGGCCCTTAGGGCACAGCACTGCTTCCCTCAGTAGCTaGAGGGTTCCCTCTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: GSPKISKDLPLRPLGHSTASLSS*RVPSGT Trigger: CGTGCCAGAGGGAACCCTTCAGCTACTGAGGGAAGC...AGTGCTGTGCCCTAAGGGCCTAAGCGGCAGGTCTTTGGAGATTTTAGGAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000190131.2 |
||
| CDS-3UTR GCA 90 bp | CTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCACAGTCACGTCTGGGTaGAGATTTTTACCCGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQHADLLPAFLVPEETPPTVTSG*RFLPAR Trigger: CCTCGCGGGTAAAAATCTGCACCCAGACGTGACTGT...GGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCATGGGGTCTGAGAGCTaGAGGCCTTCCAGGCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPACGLAACFPRSRGNTAMGSES*RPSRLR Trigger: TCTAAGCCTGGAAGGCCTGCAGCTCTCAGACCCCAT...GGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCGCTTAGGCCCTTAGGGCACAGCACTGACAGAATCGGCTCTATAGTTTTGGGAGGGCTCTGGGGGTaGCCGAGGTTTGAGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPLRPLGHSTDRIGSIVLGGLWG*PRFESS Trigger: ACTGCTCTCAAACCTCGGCCACCCCCAGAGCCCTCC...CAAAACTATAGAGCCGATTCTGTCAGTGCTGTGCCCTAAGGGCCTAAGCGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR CCA 90 bp | GGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTTGCTGCCTGGAGGGCTCTGGGGGTaGCCGAGGTTTGAGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKANRKSNQGLQHADLLPGGLWG*PRFESS Trigger: ACTGCTCTCAAACCTCGGCCACCCCCAGAGCCCTCC...AGGCAGCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR CCA 90 bp | GACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGTAAGCACGCGCACAGTCACGTCTaGGTGCAGATTTTTACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: DLLPAFLVPEETPPCGKHAHSHV*VQIFTR Trigger: GCGGGTAAAAATCTGCACCCAGACGTGACTGTGCGC...GTGCTTACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCGCTTCGGCCGACGGATaGTCACAAAGTCTTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPACGLAACFPRSRGNTAASADG*SQSLCH Trigger: GTGACAAAGACTTTGTGATCATCCGTCGGCCGAAGC...GGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCGCACGTGCTTTTCAGTaGAGTCAAAGCACCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQHADLLPAFLVPEETPPARAFQ*SQSTRR Trigger: TCTCCTGGTGCTTTGACTTCACTGAAAAGCACGTGC...GGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR GCA 90 bp | ACCAAGGTCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAAGGCGGTACCACCTCTTaGAAACGCCCGAGACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKVSSMRTCCLLSSFQRKGGTTS*KRPRLS Trigger: TGAGAGTCTCGGGCGTTTGCAAGAGGTGGTACCGCC...TTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR CCA 90 bp | GCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGCTGAAGGGTTCCCTCTaGCACGATTCCAAAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: ACGLAACFPRSRGNTALRLKGSL*HDSKNL Trigger: CAAGTTTTTGGAATCGTGCCAGAGGGAACCCTTCAG...CCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCGCTTAGGCCCTTAGGGCACAGCACTGACAGAATCGGCTCTATAGTTTTGCACTCCCTTTGCCCTTaGCTCGTTTCCTTGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLRPLGHSTDRIGSIVLHSLCP*LVSLEG Trigger: GCCCTCCAAGGAAACGAGTCAAGGGCAAAGGGAGTG...CAAAACTATAGAGCCGATTCTGTCAGTGCTGTGCCCTAAGGGCCTAAGCGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | GGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTTGCTGCCTCACTCCCTTTGCCCTTaGCTCGTTTCCTTGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKANRKSNQGLQHADLLPHSLCP*LVSLEG Trigger: GCCCTCCAAGGAAACGAGTCAAGGGCAAAGGGAGTG...AGGCAGCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCGCTTAGGCCCTTAGGGCACAGCACTGACAGAATCGGCTCTATAGTTTTGCTTGACAATGGGGTCTaGGAGCTGCAGGCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLRPLGHSTDRIGSIVLLDNGV*ELQAFQ Trigger: CTGGAAGGCCTGCAGCTCTCAGACCCCATTGTCAAG...CAAAACTATAGAGCCGATTCTGTCAGTGCTGTGCCCTAAGGGCCTAAGCGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | GGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTTGCTGCCTCTTGACAATGGGGTCTaGGAGCTGCAGGCCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKANRKSNQGLQHADLLPLDNGV*ELQAFQ Trigger: CTGGAAGGCCTGCAGCTCTCAGACCCCATTGTCAAG...AGGCAGCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCGCACGTGCTTTTCAGTaGAGTCAAAGCACCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPACGLAACFPRSRGNTAARAFQ*SQSTRR Trigger: TCTCCTGGTGCTTTGACTTCACTGAAAAGCACGTGC...GGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | GTGAAGGCTAAGGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGGCTTCCCTCAGTAGCTaGAGGGTTCCCTCTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: VKAKAKPIGRVTKVSSMRASLSS*RVPSGT Trigger: CGTGCCAGAGGGAACCCTTCAGCTACTGAGGGAAGC...CCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCCTTAGCCTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGTAAGCACTGAGTCAGTCGGCACTTaGTACCCCAAATCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TCCLLSSFQRKHRPAVSTESVGT*YPKSPG Trigger: ACCTGGAGATTTGGGGTATCAAGTGCCGACTGACTC...AGTGCTTACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000190131.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGGTCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACAGGCCGAGACACCCATaGCTGATAGCAGTTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRSPACGLAACFPRSRGNRPRHP*LIAVQK Trigger: CTTCTGAACTGCTATCAGGCATGGGTGTCTCGGCCT...GTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
||
| CDS-3UTR GCA 90 bp | ACCAAGGTCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAAATGGGGTCTGAGAGCTaGAGGCCTTCCAGGCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKVSSMRTCCLLSSFQRKMGSES*RPSRLR Trigger: TCTAAGCCTGGAAGGCCTGCAGCTCTCAGACCCCAT...TTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR CCA 90 bp | GCTAAGGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTTGCCTTGACTCGTTTCCTTaGAGGGCTCTGGGGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AKAKPIGRVTKVSSMRTCLDSFP*RALGVA Trigger: GGCCACCCCCAGAGCCCTCCAAGGAAACGAGTCAAG...GCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCCTTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR CCA 90 bp | GACCTGCCGCTTAGGCCCTTAGGGCACAGCACTGACAGAATCGGCTCTATAGTTGCGCACAGTCACGTCTaGGTGCAGATTTTTACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: DLPLRPLGHSTDRIGSIVAHSHV*VQIFTR Trigger: GCGGGTAAAAATCTGCACCCAGACGTGACTGTGCGC...AACTATAGAGCCGATTCTGTCAGTGCTGTGCCCTAAGGGCCTAAGCGGCAGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | GACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGTAAGCACCGACACATTTATCACTaGGTTCGACAGGTCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: DLLPAFLVPEETPPCGKHRHIYH*VRQVHV Trigger: CACATGGACCTGTCGAACTCAGTGATAAATGTGTCG...GTGCTTACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGGTCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACGCACGTGCTTTTCAGTaGAGTCAAAGCACCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRSPACGLAACFPRSRGNARAFQ*SQSTRR Trigger: TCTCCTGGTGCTTTGACTTCACTGAAAAGCACGTGC...GTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCTAAAATCTCCAAAGACCTGCCGCTTAGGCCCTTAGGGCACAGCACTGACTATCATAGCACCGGCTaGGCGAGAGGTGTTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPKISKDLPLRPLGHSTDYHSTG*ARGVGG Trigger: ACCTCCAACACCTCTCGCTCAGCCGGTGCTATGATA...GTCAGTGCTGTGCCCTAAGGGCCTAAGCGGCAGGTCTTTGGAGATTTTAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | ACCAAGGTCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAAGAGTCAGTCGGCACTTaGTACCCCAAATCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKVSSMRTCCLLSSFQRKESVGT*YPKSPG Trigger: ACCTGGAGATTTGGGGTATCAAGTGCCGACTGACTC...TTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000190131.2 |
||
| CDS-3UTR GCA 90 bp | GGCTCTCCTAAAATCTCCAAAGACCTGCCGCTTAGGCCCTTAGGGCACAGCACTAGGCCGAGACACCCATaGCTGATAGCAGTTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSPKISKDLPLRPLGHSTRPRHP*LIAVQK Trigger: CTTCTGAACTGCTATCAGGCATGGGTGTCTCGGCCT...AGTGCTGTGCCCTAAGGGCCTAAGCGGCAGGTCTTTGGAGATTTTAGGAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
||
| CDS-3UTR GCA 90 bp | GTGAAGGCTAAGGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGGGCGGTACCACCTCTTaGAAACGCCCGAGACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VKAKAKPIGRVTKVSSMRGGTTS*KRPRLS Trigger: TGAGAGTCTCGGGCGTTTGCAAGAGGTGGTACCGCC...CCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCCTTAGCCTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR GCA 90 bp | AACAGGTACTGTATGTCTGAGGGCATCTGGAGGCCAGAGCCCGCCATCAGCCCAACAGCCGCTTGCACGTaGTTTTCAGTGAAGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NRYCMSEGIWRPEPAISPTAACT*FSVKSK Trigger: CTTTGACTTCACTGAAAAGCACGTGCAAGCGGCTGT...TGGGCTGATGGCGGGCTCTGGCCTCCAGATGCCCTCAGACATACAGTACCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
||
| CDS-3UTR GCA 90 bp | GACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGTAAGCACGTCCATAGTTGGCCTTaGAATGGTGGTGAAATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DLLPAFLVPEETPPCGKHVHSWP*NGGEIG Trigger: GCCTATTTCACCACCATTGCAAGGCCAACTATGGAC...GTGCTTACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000190131.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCTAAAATCTCCAAAGACCTGCCGCTTAGGCCCTTAGGGCACAGCACTGACGCGCACAGTCACGTCTaGGTGCAGATTTTTACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SPKISKDLPLRPLGHSTDAHSHV*VQIFTR Trigger: GCGGGTAAAAATCTGCACCCAGACGTGACTGTGCGC...GTCAGTGCTGTGCCCTAAGGGCCTAAGCGGCAGGTCTTTGGAGATTTTAGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCTAAAATCTCCAAAGACCTGCCGCTTAGGCCCTTAGGGCACAGCACTGACGCTTCGGCCGACGGATaGTCACAAAGTCTTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPKISKDLPLRPLGHSTDASADG*SQSLCH Trigger: GTGACAAAGACTTTGTGATCATCCGTCGGCCGAAGC...GTCAGTGCTGTGCCCTAAGGGCCTAAGCGGCAGGTCTTTGGAGATTTTAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | AATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCTATCATAGCACCGGCTaGGCGAGAGGTGTTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NRKSNQGLQHADLLPAFLYHSTG*ARGVGG Trigger: ACCTCCAACACCTCTCGCTCAGCCGGTGCTATGATA...GAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR GCA 90 bp | GGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTTGCTGCCTTCCAGGCTTAGATTCTaGAGCTTGGAGCACTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GKANRKSNQGLQHADLLPSRLRF*SLEHSD Trigger: GTCCGAGTGCTCCAAGCTGCAGAATCTAAGCCTGGA...AGGCAGCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| 3UTR CAA 72 bp | AATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTaGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCG | + |
|
Preference number: 4 (lower is better) Translates to: NRKSNQGLQHAD*LPAFLVPEETP Trigger: CGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | ACCAAGGTCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACGACACATTTATCACTaGGTTCGACAGGTCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: TKVSSMRTCCLLSSFQRKRHIYH*VRQVHV Trigger: CACATGGACCTGTCGAACTCAGTGATAAATGTGTCG...TTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | GCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGAGTCATTCTTTAGCATaGTACTGTCACTTAAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ACGLAACFPRSRGNTALRSHSLA*YCHLSR Trigger: TCGACTTAAGTGACAGTATCATGCTAAAGAATGACT...CCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR GCA 90 bp | GTGAAGGCTAAGGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACAGTCACGTCTGGGTaGAGATTTTTACCCGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKAKAKPIGRVTKVSSMRTVTSG*RFLPAR Trigger: CCTCGCGGGTAAAAATCTGCACCCAGACGTGACTGT...CCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCCTTAGCCTTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR GCA 90 bp | GCTAAGGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTTGCACAGTCACGTCTGGGTaGAGATTTTTACCCGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AKAKPIGRVTKVSSMRTCTVTSG*RFLPAR Trigger: CCTCGCGGGTAAAAATCTGCACCCAGACGTGACTGT...GCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCCTTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCGCTTAGGCCCTTAGGGCACAGCACTGACAGAATCGGCTCTATAGTTTTGAGACAACTGGGCTTTTaGAGAGTCAGTCGGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPLRPLGHSTDRIGSIVLRQLGF*RVSRHL Trigger: CAAGTGCCGACTGACTCTGCAAAAGCCCAGTTGTCT...CAAAACTATAGAGCCGATTCTGTCAGTGCTGTGCCCTAAGGGCCTAAGCGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | AATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCTCTGTGCAAGAGTCTTaGCAATGGGGTCTGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NRKSNQGLQHADLLPAFLSVQES*QWGLRA Trigger: AGCTCTCAGACCCCATTGTCAAGACTCTTGCACAGA...GAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR TCA 90 bp | AGTTGGCCTTGCAATGGTGGTGAAATAGGCGCAGTTAATCTGCAGCCGAGGAAGTCTGTGCAAGAGTCTTaGCAATGGGGTCTGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SWPCNGGEIGAVNLQPRKSVQES*QWGLRA Trigger: AGCTCTCAGACCCCATTGTCAAGACTCTTGCACAGA...CTTCCTCGGCTGCAGATTAACTGCGCCTATTTCACCACCATTGCAAGGCCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| CDS-3UTR GCA 90 bp | CTGCCGCTTAGGCCCTTAGGGCACAGCACTGACAGAATCGGCTCTATAGTTTTGACAGCCGCTTGCACGTaGTTTTCAGTGAAGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLRPLGHSTDRIGSIVLTAACT*FSVKSK Trigger: CTTTGACTTCACTGAAAAGCACGTGCAAGCGGCTGT...CAAAACTATAGAGCCGATTCTGTCAGTGCTGTGCCCTAAGGGCCTAAGCGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCGCTTAGGCCCTTAGGGCACAGCACTGACAGAATCGGCTCTATAGTTTTGGTCCATAGTTGGCCTTaGAATGGTGGTGAAATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLRPLGHSTDRIGSIVLVHSWP*NGGEIG Trigger: GCCTATTTCACCACCATTGCAAGGCCAACTATGGAC...CAAAACTATAGAGCCGATTCTGTCAGTGCTGTGCCCTAAGGGCCTAAGCGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000190131.2 |
||
| CDS-3UTR GCA 90 bp | AATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCAGACAACTGGGCTTTTaGAGAGTCAGTCGGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: NRKSNQGLQHADLLPAFLRQLGF*RVSRHL Trigger: CAAGTGCCGACTGACTCTGCAAAAGCCCAGTTGTCT...GAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000190131.2 |
||
| CDS-3UTR CCA 90 bp | GAAATGTGTTGGCTTATAAGGGGCATCGAGTTCAGGAGGTCACAAGAGATCAAACTTGACTCGTTTCCTTaGAGGGCTCTGGGGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EMCWLIRGIEFRRSQEIKLDSFP*RALGVA Trigger: GGCCACCCCCAGAGCCCTCCAAGGAAACGAGTCAAG...TTTGATCTCTTGTGACCTCCTGAACTCGATGCCCCTTATAAGCCAACACATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| CDS-3UTR CCA 90 bp | GCCTTTGAGGTTTTCAATCCTGCACCAATCCTGTCCTGCTTCCGGCTGTGTCTCCTGAAGGGTTCCCTCTaGCACGATTCCAAAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: AFEVFNPAPILSCFRLCLLKGSL*HDSKNL Trigger: CAAGTTTTTGGAATCGTGCCAGAGGGAACCCTTCAG...GAGACACAGCCGGAAGCAGGACAGGATTGGTGCAGGATTGAAAACCTCAAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096482.10 |
||
| CDS-3UTR TCA 90 bp | GTGAAGGCTAAGGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGCGACACATTTATCACTaGGTTCGACAGGTCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: VKAKAKPIGRVTKVSSMRRHIYH*VRQVHV Trigger: CACATGGACCTGTCGAACTCAGTGATAAATGTGTCG...CCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCCTTAGCCTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR GCA 90 bp | GTGAAGGCTAAGGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACAGCCGCTTGCACGTaGTTTTCAGTGAAGTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VKAKAKPIGRVTKVSSMRTAACT*FSVKSK Trigger: CTTTGACTTCACTGAAAAGCACGTGCAAGCGGCTGT...CCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCCTTAGCCTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR CCA 90 bp | GCTAAGGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTTGCCTTGCTGTCCATAGTTaGCCTTGCAATGGTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AKAKPIGRVTKVSSMRTCLAVHS*PCNGGE Trigger: TTCACCACCATTGCAAGGCCAACTATGGACAGCAAG...GCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCCTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000190131.2 |
||
| 3UTR CAA 72 bp | CCCAGCTTCATCTCCCTGGTCTGTGTTTGTTCTAGGTaGGGACATAGTGCAAAGTCGAAGGACAGGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PSFISLVCVCSR*GHSAKSKDREC Trigger: ACATTCCCTGTCCTTCGACTTTGCACTATGTCCCAACCTAGAACAAACACAGACCAGGGAGATGAAGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| CDS-3UTR TCA 90 bp | ACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGTAAGCACTAGTCATTCTTTAGCATaGTACTGTCACTTAAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TCCLLSSFQRKHRPAVSTSHSLA*YCHLSR Trigger: TCGACTTAAGTGACAGTATCATGCTAAAGAATGACT...AGTGCTTACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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| CDS-3UTR TCA 90 bp | CATAGACCAGTTCTTCTCACCTCTTCTTACGATCCGAGATGCCCATCATTAGATTATCATAGCACCGGCTaGGCGAGAGGTGTTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HRPVLLTSSYDPRCPSLDYHSTG*ARGVGG Trigger: ACCTCCAACACCTCTCGCTCAGCCGGTGCTATGATA...ATCTAATGATGGGCATCTCGGATCGTAAGAAGAGGTGAGAAGAACTGGTCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| CDS-3UTR TCA 90 bp | GAAATGTGTTGGCTTATAAGGGGCATCGAGTTCAGGAGGTCACAAGAGATCAAAGCTTCGGCCGACGGATaGTCACAAAGTCTTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EMCWLIRGIEFRRSQEIKASADG*SQSLCH Trigger: GTGACAAAGACTTTGTGATCATCCGTCGGCCGAAGC...TTTGATCTCTTGTGACCTCCTGAACTCGATGCCCCTTATAAGCCAACACATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| CDS-3UTR TCA 90 bp | ACCAAGGTCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAAAGTCATTCTTTAGCATaGTACTGTCACTTAAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TKVSSMRTCCLLSSFQRKSHSLA*YCHLSR Trigger: TCGACTTAAGTGACAGTATCATGCTAAAGAATGACT...TTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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| CDS-3UTR GCA 90 bp | GAAATGTGTTGGCTTATAAGGGGCATCGAGTTCAGGAGGTCACAAGAGATCAAATCCAGGCTTAGATTCTaGAGCTTGGAGCACTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EMCWLIRGIEFRRSQEIKSRLRF*SLEHSD Trigger: GTCCGAGTGCTCCAAGCTGCAGAATCTAAGCCTGGA...TTTGATCTCTTGTGACCTCCTGAACTCGATGCCCCTTATAAGCCAACACATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| CDS-3UTR CCA 90 bp | TACATCATGCACTCCTGTGCTGCTGTGAAACTAACCTCATGCCTGCACAGAGTTCTTGCTGTCCATAGTTaGCCTTGCAATGGTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YIMHSCAAVKLTSCLHRVLAVHS*PCNGGE Trigger: TTCACCACCATTGCAAGGCCAACTATGGACAGCAAG...AACTCTGTGCAGGCATGAGGTTAGTTTCACAGCAGCACAGGAGTGCATGATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096482.10 |
||
| CDS-3UTR GCA 90 bp | TCCGCCCAGCTCACCGTACATATAGCTTATTCTTCAAAGTCAAGTTTTATAAAAGGCGGTACCACCTCTTaGAAACGCCCGAGACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SAQLTVHIAYSSKSSFIKGGTTS*KRPRLS Trigger: TGAGAGTCTCGGGCGTTTGCAAGAGGTGGTACCGCC...TTTTATAAAACTTGACTTTGAAGAATAAGCTATATGTACGGTGAGCTGGGCGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
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| 3UTR CAA 72 bp | CCCAGGGGATCAGTGAGCACAGCAGTGACCTTTATGTaGTCACAGTCAATATGTAGTCAAATAAAGCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PRGSVSTAVTFM*SQSICSQIKPV Trigger: AACCGGCTTTATTTGACTACATATTGACTGTGACAACATAAAGGTCACTGCTGTGCTCACTGATCCCCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
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| CDS GCA 90 bp | TCCATGTGCTGTACCCGGAAAGAGCTGAAGCTTTCACCCAGCGGCTaGTCCATAAAGGACCGAGGGCAGCGGAAGGCGACCACCCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SMCCTRKELKLSPSG*SIKDRGQRKATTPR Trigger: CCGCGGGGTGGTCGCCTTCCGCTGCCCTCGGTCCTTTATGGAGCAGCCGCTGGGTGAAAGCTTCAGCTCTTTCCGGGTACAGCACATGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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| CDS GCA 90 bp | GGGACTGCCAGAGAGACTCATCGAGCGAGAGGCGGTACCACCTCTTaGAAACGCCCGAGACTCTCAGCAGCTCAGGGAGGCACAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTARETHRARGGTTS*KRPRLSAAQGGTDR Trigger: CCTGTCTGTGCCTCCCTGAGCTGCTGAGAGTCTCGGGCGTTTGCAAGAGGTGGTACCGCCTCTCGCTCGATGAGTCTCTCTGGCAGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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| CDS-3UTR CAA 90 bp | GACCTTTGGGTCCAGAACCAAGCCTGTGCGTTTCATTCAGGGCGGCTCCCGTGGAAGCTGGTGGTGACGTaGCCACTCTGGTCCGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: DLWVQNQACAFHSGRLPWKLVVT*PLWSGI Trigger: GATTCCGGACCAGAGTGGCAACGTCACCACCAGCTT...CCACGGGAGCCGCCCTGAATGAAACGCACAGGCTTGGTTCTGGACCCAAAGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| CDS-3UTR CAA 90 bp | GACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGTAAGCACAGAGTCAGTCGGCACTaGATACCCCAAATCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DLLPAFLVPEETPPCGKHRVSRH*IPQISR Trigger: CCTGGAGATTTGGGGTATCAAGTGCCGACTGACTCT...GTGCTTACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000190131.2 |
||
| CDS-3UTR CAA 90 bp | AACAGGTACTGTATGTCTGAGGGCATCTGGAGGCCAGAGCCCGCCATCAGCCCATTCTGTGCAAGAGTCTaGACAATGGGGTCTGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NRYCMSEGIWRPEPAISPFCARV*TMGSES Trigger: GCTCTCAGACCCCATTGTCAAGACTCTTGCACAGAA...TGGGCTGATGGCGGGCTCTGGCCTCCAGATGCCCTCAGACATACAGTACCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
||
| CDS-3UTR CAA 90 bp | GACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGTAAGCACGCTGAGCGAGAGGTGTaGGAGGTAGTTGAGTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: DLLPAFLVPEETPPCGKHAEREV*EVVELK Trigger: TTTCAACTCAACTACCTCCAACACCTCTCGCTCAGC...GTGCTTACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS-3UTR CAA 90 bp | GCTAAGGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTTGCAAGCTGGTGGTGACGTaGCCACTCTGGTCCGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: AKAKPIGRVTKVSSMRTCKLVVT*PLWSGI Trigger: GATTCCGGACCAGAGTGGCAACGTCACCACCAGCTT...GCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCCTTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
||
| CDS-3UTR CAA 90 bp | GACCTGCCGCTTAGGCCCTTAGGGCACAGCACTGACAGAATCGGCTCTATAGTTAGAGTCAGTCGGCACTaGATACCCCAAATCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DLPLRPLGHSTDRIGSIVRVSRH*IPQISR Trigger: CCTGGAGATTTGGGGTATCAAGTGCCGACTGACTCT...AACTATAGAGCCGATTCTGTCAGTGCTGTGCCCTAAGGGCCTAAGCGGCAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000190131.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCATGATCACAAAGTCTTaGTCACTCCCTTTGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPACGLAACFPRSRGNTAMITKS*SLPLPL Trigger: CAAGGGCAAAGGGAGTGACAAAGACTTTGTGATCAT...GGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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| CDS GCA 90 bp | TTATGGAGGTTCGACACATTTATCACTGAGTTCGACAGGTCCATGTaGTGTACCCGGAAAGAGCTGAAGCTTTCACCCAGCGGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LWRFDTFITEFDRSM*CTRKELKLSPSGCS Trigger: GGAGCAGCCGCTGGGTGAAAGCTTCAGCTCTTTCCGGGTACAGCACATGGACCTGTCGAACTCAGTGATAAATGTGTCGAACCTCCATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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| CDS-3UTR CAA 90 bp | ACTTGCTGCCTGCTTTCCTCGTTCCAGAGGAAACACCGCCCTGCGGTAAGCACTATGATCACAAAGTCTTaGTCACTCCCTTTGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TCCLLSSFQRKHRPAVSTMITKS*SLPLPL Trigger: CAAGGGCAAAGGGAGTGACAAAGACTTTGTGATCAT...AGTGCTTACCGCAGGGCGGTGTTTCCTCTGGAACGAGGAAAGCAGGCAGCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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| CDS-3UTR CAA 90 bp | GGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTTGCTGCCTTCTTTGTCACTCCCTTaGCCCTTGACTCGTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GKANRKSNQGLQHADLLPSLSLP*PLTRFL Trigger: AAGGAAACGAGTCAAGGGCAAAGGGAGTGACAAAGA...AGGCAGCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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| CDS-3UTR CAA 90 bp | GCTAAGGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTTGCTTCTGTGCAAGAGTCTaGACAATGGGGTCTGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AKAKPIGRVTKVSSMRTCFCARV*TMGSES Trigger: GCTCTCAGACCCCATTGTCAAGACTCTTGCACAGAA...GCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCCTTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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| CDS TCA 90 bp | GGAGCACTCGGACAGAATCTTATGGAGGTTCGACACATTTATCACTaGGTTCGACAGGTCCATGTGCTGTACCCGGAAAGAGCTGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GALGQNLMEVRHIYH*VRQVHVLYPERAEA Trigger: AGCTTCAGCTCTTTCCGGGTACAGCACATGGACCTGTCGAACTCAGTGATAAATGTGTCGAACCTCCATAAGATTCTGTCCGAGTGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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| CDS-3UTR CAA 90 bp | AATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCTCTTTGTCACTCCCTTaGCCCTTGACTCGTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: NRKSNQGLQHADLLPAFLSLSLP*PLTRFL Trigger: AAGGAAACGAGTCAAGGGCAAAGGGAGTGACAAAGA...GAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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| CDS-3UTR CAA 90 bp | AATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGACTTGCTGCCTGCTTTCCTCATCTCCAGGTTCTTCTaGCTGTCCATAGTTGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: NRKSNQGLQHADLLPAFLISRFF*LSIVGL Trigger: AAGGCCAACTATGGACAGCAAGAAGAACCTGGAGAT...GAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGGTTACTCTTCCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000190131.2 |
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| CDS-3UTR CAA 90 bp | GTGAAGGCTAAGGCAAAGCCAATAGGAAGAGTAACCAAGGTCTCCAGCATGCGGATCTCCAGGTTCTTCTaGCTGTCCATAGTTGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VKAKAKPIGRVTKVSSMRISRFF*LSIVGL Trigger: AAGGCCAACTATGGACAGCAAGAAGAACCTGGAGAT...CCGCATGCTGGAGACCTTGGTTACTCTTCCTATTGGCTTTGCCTTAGCCTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000190131.2 |
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| CDS-3UTR CAA 90 bp | CTTAGGCCCTTAGGGCACAGCACTGACAGAATCGGCTCTATAGTTTTGAAAAAGGCTGAGCGAGAGGTGTaGGAGGTAGTTGAGTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LRPLGHSTDRIGSIVLKKAEREV*EVVELK Trigger: TTTCAACTCAACTACCTCCAACACCTCTCGCTCAGC...CTTTTTCAAAACTATAGAGCCGATTCTGTCAGTGCTGTGCCCTAAGGGCCTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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| CDS-3UTR CAA 90 bp | GAAATGTGTTGGCTTATAAGGGGCATCGAGTTCAGGAGGTCACAAGAGATCAAATCTTTGTCACTCCCTTaGCCCTTGACTCGTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EMCWLIRGIEFRRSQEIKSLSLP*PLTRFL Trigger: AAGGAAACGAGTCAAGGGCAAAGGGAGTGACAAAGA...TTTGATCTCTTGTGACCTCCTGAACTCGATGCCCCTTATAAGCCAACACATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110585.10 |
||
| CDS-3UTR CAA 90 bp | TCCGCCCAGCTCACCGTACATATAGCTTATTCTTCAAAGTCAAGTTTTATAAAATTCTGTGCAAGAGTCTaGACAATGGGGTCTGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SAQLTVHIAYSSKSSFIKFCARV*TMGSES Trigger: GCTCTCAGACCCCATTGTCAAGACTCTTGCACAGAA...TTTTATAAAACTTGACTTTGAAGAATAAGCTATATGTACGGTGAGCTGGGCGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
||
| CDS-3UTR CAA 90 bp | TCCGCCCAGCTCACCGTACATATAGCTTATTCTTCAAAGTCAAGTTTTATAAAAGCTGAGCGAGAGGTGTaGGAGGTAGTTGAGTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SAQLTVHIAYSSKSSFIKAEREV*EVVELK Trigger: TTTCAACTCAACTACCTCCAACACCTCTCGCTCAGC...TTTTATAAAACTTGACTTTGAAGAATAAGCTATATGTACGGTGAGCTGGGCGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 |
||
| CDS GCA 72 bp | ACCCCGCGGGAGAGCAAGCGCACAGTCACGTCTGGGTaGAGATTTTTACCCGCGAGGTCGAGGGACTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TPRESKRTVTSG*RFLPARSRDCQ Trigger: CTGGCAGTCCCTCGACCTCGCGGGTAAAAATCTGCACCCAGACGTGACTGTGCGCTTGCTCTCCCGCGGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS CCA 72 bp | GACCACCCCGCGGGAGAGCAAGCGCACAGTCACGTCTaGGTGCAGATTTTTACCCGCGAGGTCGAGGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: DHPAGEQAHSHV*VQIFTREVEGL Trigger: CAGTCCCTCGACCTCGCGGGTAAAAATCTGCACCCAGACGTGACTGTGCGCTTGCTCTCCCGCGGGGTGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS CAA 90 bp | AGGGACTGCCAGAGAGACTCATCGAGCGAGAGGCGGTACCACCTCTaGCAAACGCCCGAGACTCTCAGCAGCTCAGGGAGGCACAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: RDCQRDSSSERRYHL*QTPETLSSSGRHRQ Trigger: CTGTCTGTGCCTCCCTGAGCTGCTGAGAGTCTCGGGCGTTTGCAAGAGGTGGTACCGCCTCTCGCTCGATGAGTCTCTCTGGCAGTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS GCA 72 bp | AGAGAGACTCATCGAGCGAGAGGCGGTACCACCTCTTaGAAACGCCCGAGACTCTCAGCAGCTCAGGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RETHRARGGTTS*KRPRLSAAQGG Trigger: GCCTCCCTGAGCTGCTGAGAGTCTCGGGCGTTTGCAAGAGGTGGTACCGCCTCTCGCTCGATGAGTCTCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS CAA 72 bp | CAGAGAGACTCATCGAGCGAGAGGCGGTACCACCTCTaGCAAACGCCCGAGACTCTCAGCAGCTCAGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QRDSSSERRYHL*QTPETLSSSGR Trigger: CCTCCCTGAGCTGCTGAGAGTCTCGGGCGTTTGCAAGAGGTGGTACCGCCTCTCGCTCGATGAGTCTCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS CAA 90 bp | AAGTTCTCCCGACTAAGCTTCGGCCGACGGATGATCACAAAGTCTTaGTCACTCCCTTTGCCCTTGACTCGTTTCCTTGGAGGGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KFSRLSFGRRMITKS*SLPLPLTRFLGGLW Trigger: CCAGAGCCCTCCAAGGAAACGAGTCAAGGGCAAAGGGAGTGACAAAGACTTTGTGATCATCCGTCGGCCGAAGCTTAGTCGGGAGAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS CAA 72 bp | CGACTAAGCTTCGGCCGACGGATGATCACAAAGTCTTaGTCACTCCCTTTGCCCTTGACTCGTTTCCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RLSFGRRMITKS*SLPLPLTRFLG Trigger: TCCAAGGAAACGAGTCAAGGGCAAAGGGAGTGACAAAGACTTTGTGATCATCCGTCGGCCGAAGCTTAGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS TCA 72 bp | GGACAGAATCTTATGGAGGTTCGACACATTTATCACTaGGTTCGACAGGTCCATGTGCTGTACCCGGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GQNLMEVRHIYH*VRQVHVLYPER Trigger: TCTTTCCGGGTACAGCACATGGACCTGTCGAACTCAGTGATAAATGTGTCGAACCTCCATAAGATTCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS CAA 72 bp | AGCATGATACTGTCACTTAAGTCGAGGCGGATGAGGTaGGGGCATCGTTTAATTATGGTACAAAGATCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SMILSLKSRRMR*GHRLIMVQRSV Trigger: AACAGATCTTTGTACCATAATTAAACGATGCCCCAACCTCATCCGCCTCGACTTAAGTGACAGTATCATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
||
| CDS CAA 90 bp | TCATTCTTTAGCATGATACTGTCACTTAAGTCGAGGCGGATGAGGTaGGGGCATCGTTTAATTATGGTACAAAGATCTGTTTTCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SFFSMILSLKSRRMR*GHRLIMVQRSVFWR Trigger: CCTCCAGAAAACAGATCTTTGTACCATAATTAAACGATGCCCCAACCTCATCCGCCTCGACTTAAGTGACAGTATCATGCTAAAGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000096482.10 ENSMUST00000110585.10 ENSMUST00000190131.2 |
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