Pregenerated sensors for SKIV2L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040356Ensembl transcript IDs: ENSMUST00000046022.16, ENSMUST00000172966.2, ENSMUST00000173415.2
Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACAGGGGAGGTGACGTCCACAGGCACAGCCCACTGTTCCTGAGGTaGAGGTTTGGGAGGCTCCGGGGTAGATACGACTGTGGCAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: HRGGDVHRHSPLFLR*RFGRLRGRYDCGSF Trigger: GAAGCTGCCACAGTCGTATCTACCCCGGAGCCTCCCAAACCTCCACCTCAGGAACAGTGGGCTGTGCCTGTGGACGTCACCTCCCCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| 3UTR GCA 90 bp | CTCCAAGTGCAGGATGGCCTGCTTCTGAAACACATCTGGCTCAAATaGCCACTGGAAAGCTGGCTGAGGGATGAGACGGTAAAAGTCGCC | + |
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Preference number: 1 (lower is better) Translates to: LQVQDGLLLKHIWLK*PLESWLRDETVKVA Trigger: GGCGACTTTTACCGTCTCATCCCTCAGCCAGCTTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAGCAGGCCATCCTGCACTTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| 3UTR CCA 90 bp | TGTGAGCTGCAACAAAGACAGAGTCGTGCTGCTCCAAGTGCAGGATaGCCTGCTTCTGAAACACATCTGGCTCAAATGCCCACTGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: CELQQRQSRAAPSAG*PASETHLAQMPTGK Trigger: CTTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAGCAGGCCATCCTGCACTTGGAGCAGCACGACTCTGTCTTTGTTGCAGCTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| 3UTR GCA 90 bp | AACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTaGTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATCC | + |
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Preference number: 1 (lower is better) Translates to: NMVGIKLKEIYLPLR*YYNPAYCYISIHTS Trigger: GGATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| 3UTR-3UTR TCA 90 bp | CTCCAAGTGCAGGATGGCCTGCTTCTGAAACACATCTGGCTCAAATGCCCACTGCGCCCACAGGGGAGGTaGCGTCCACAGGCACAGCCC | + |
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Preference number: 2 (lower is better) Translates to: LQVQDGLLLKHIWLKCPLRPQGR*RPQAQP Trigger: GGGCTGTGCCTGTGGACGTCACCTCCCCTGTGGGCG...CAGTGGGCATTTGAGCCAGATGTGTTTCAGAAGCAGGCCATCCTGCACTTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCAGATGTGTGAGCTGCAACAAAGACAGAGTCGTGCTGCTCCAAGTGCAGATCCTCCAAGCTGCTTaGTCGGACCAGGGGAGTACC | + |
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Preference number: 2 (lower is better) Translates to: PSRCVSCNKDRVVLLQVQILQAA*SDQGST Trigger: GGTACTCCCCTGGTCCGAGCAAGCAGCTTGGAGGAT...CTGCACTTGGAGCAGCACGACTCTGTCTTTGTTGCAGCTCACACATCTGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCAGCAGATGTGTGAGCTGCAACAAAGACAGAGTCGTGCTGCTCCAAGTGCTTCTGAAACACATCTaGCTCAAATGCCCACTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LPSRCVSCNKDRVVLLQVLLKHI*LKCPLE Trigger: TTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAG...CACTTGGAGCAGCACGACTCTGTCTTTGTTGCAGCTCACACATCTGCTGGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| 3UTR CCA 72 bp | GGTGACGTCCACAGGCACAGCCCACTGTTCCTGAGGTaGAGGTTTGGGAGGCTCCGGGGTAGATACGACTGT | + |
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Preference number: 3 (lower is better) Translates to: GDVHRHSPLFLR*RFGRLRGRYDC Trigger: ACAGTCGTATCTACCCCGGAGCCTCCCAAACCTCCACCTCAGGAACAGTGGGCTGTGCCTGTGGACGTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCTAGGGCCTCCTGCTGCCTCGCCTTCATCCTCGTCACCTCCACTCAGATCAAAATCCACCCCTTTCTaGAAGCCAGGTGGGACAGTG | + |
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Preference number: 3 (lower is better) Translates to: PLGPPAASPSSSSPPLRSKSTPF*KPGGTV Trigger: CACTGTCCCACCTGGCTTCAAGAAAGGGGTGGATTT...TGATCTGAGTGGAGGTGACGAGGATGAAGGCGAGGCAGCAGGAGGCCCTAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCCCAGCAGATGTGTGAGCTGCAACAAAGACAGAGTCGTGCTGCTCCAAGTGGATCCTCCAAGCTGCTaGCTCGGACCAGGGGAGTAC | + |
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Preference number: 3 (lower is better) Translates to: LPSRCVSCNKDRVVLLQVDPPSC*LGPGEY Trigger: GTACTCCCCTGGTCCGAGCAAGCAGCTTGGAGGATC...CACTTGGAGCAGCACGACTCTGTCTTTGTTGCAGCTCACACATCTGCTGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| 3UTR GCA 72 bp | CAGGATGGCCTGCTTCTGAAACACATCTGGCTCAAATaGCCACTGGAAAGCTGGCTGAGGGATGAGACGGTA | + |
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Preference number: 3 (lower is better) Translates to: QDGLLLKHIWLK*PLESWLRDETV Trigger: TACCGTCTCATCCCTCAGCCAGCTTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAGCAGGCCATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| 3UTR CCA 72 bp | CTGAAACACATCTGGCTCAAATGCCCACTGGAAAGCTaGCTGAGGGATGAGACGGTAAAAGTCGCCCACAGG | + |
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Preference number: 3 (lower is better) Translates to: LKHIWLKCPLES*LRDETVKVAHR Trigger: CCTGTGGGCGACTTTTACCGTCTCATCCCTCAGCCAGCTTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| 3UTR CCA 72 bp | CTCCAAGTGCAGGATGGCCTGCTTCTGAAACACATCTaGCTCAAATGCCCACTGGAAAGCTGGCTGAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: LQVQDGLLLKHI*LKCPLESWLRD Trigger: ATCCCTCAGCCAGCTTTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAGCAGGCCATCCTGCACTTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| 3UTR CCA 72 bp | CAACAAAGACAGAGTCGTGCTGCTCCAAGTGCAGGATaGCCTGCTTCTGAAACACATCTGGCTCAAATGCCC | + |
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Preference number: 3 (lower is better) Translates to: QQRQSRAAPSAG*PASETHLAQMP Trigger: GGGCATTTGAGCCAGATGTGTTTCAGAAGCAGGCCATCCTGCACTTGGAGCAGCACGACTCTGTCTTTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| 3UTR GCA 72 bp | GGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTaGTACTACAACCCAGCTTATTGTTACATTTCTATC | + |
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Preference number: 3 (lower is better) Translates to: GIKLKEIYLPLR*YYNPAYCYISI Trigger: GATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| 3UTR GCA 72 bp | AAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTaGCCCTTCGCTGCTACTACAACCCAGCTTATTGTT | + |
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Preference number: 3 (lower is better) Translates to: KTWLASNSKRFI*PFAATTTQLIV Trigger: AACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| 3UTR CAA 72 bp | TGGCAGCTTCCTTCAACACTAGATCCTCCAAGCTGCTaGCTCGGACCAGGGGAGTACCAGAGGGGGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: WQLPSTLDPPSC*LGPGEYQRGRG Trigger: CCCCCTCCCCCTCTGGTACTCCCCTGGTCCGAGCAAGCAGCTTGGAGGATCTAGTGTTGAAGGAAGCTGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| CDS-3UTR TCA 90 bp | CTCCAAGTGCAGGATGGCCTGCTTCTGAAACACATCTGGCTCAAATGCCCACTGCACGGCAGCCAGGAGTaGCCAGGGATCCGTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LQVQDGLLLKHIWLKCPLHGSQE*PGIRLP Trigger: AGGAAGACGGATCCCTGGTCACTCCTGGCTGCCGTG...CAGTGGGCATTTGAGCCAGATGTGTTTCAGAAGCAGGCCATCCTGCACTTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| CDS-3UTR TCA 90 bp | CCCAGCAGATGTGTGAGCTGCAACAAAGACAGAGTCGTGCTGCTCCAAGTGCAGGGGTGTCTCTGGGCCTaGAGGTCAGATGGGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: PSRCVSCNKDRVVLLQVQGCLWA*RSDGTG Trigger: TCCAGTCCCATCTGACCTTCAGGCCCAGAGACACCC...CTGCACTTGGAGCAGCACGACTCTGTCTTTGTTGCAGCTCACACATCTGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| CDS-3UTR GCA 90 bp | TTTCAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCGCAGGCCCACCCTGGTaGGTGGGCTGCTTGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: FQNMVGIKLKEIYLPLRCAGPPW*VGCLAP Trigger: CGGGGCCAAGCAGCCCACGCACCAGGGTGGGCCTGC...GCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR GCA 90 bp | CAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACCACCCCGCGGTCCTGTaGAGGCCCACCCTGGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: QNMVGIKLKEIYLPLRCYHPAVL*RPTLVR Trigger: ACGCACCAGGGTGGGCCTGCACAGGACCGCGGGGTG...GTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR GCA 90 bp | CTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACAGCCCGGCCTGCCATCTaGACGTACTCCCCAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LPLRCYYNPAYCYISIHTARPAI*TYSPGS Trigger: GCTGCCTGGGGAGTACGTGCAGATGGCAGGCCGGGC...TGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR GCA 90 bp | AACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACCCGGCCTGCCCGGCCTaGCATCTGCACGTACTCCCC | + |
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Preference number: 4 (lower is better) Translates to: NMVGIKLKEIYLPLRCYYPACPA*HLHVLP Trigger: GGGGAGTACGTGCAGATGGCAGGCCGGGCAGGCCGG...GTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR GCA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACAGGCCCCTCCGGCCTaGCCGGCCTGCCATCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPQAPPA*PACHLH Trigger: GTGCAGATGGCAGGCCGGGCAGGCCGGAGGGGCCTG...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CCA 90 bp | CCCTTTCTTGAAGCCAGGTGGGACAGTGAGAAGATCTTTCTCAAAGTCTATCTCCTGGGAGGCTGGCCCTaGAGGCCGGCGAAGGGACAA | + |
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Preference number: 4 (lower is better) Translates to: PFLEARWDSEKIFLKVYLLGGWP*RPAKGQ Trigger: TTGTCCCTTCGCCGGCCTCCAGGGCCAGCCTCCCAG...GAGATAGACTTTGAGAAAGATCTTCTCACTGTCCCACCTGGCTTCAAGAAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| CDS-3UTR CCA 90 bp | CTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATGTGCAGGCCCACCCTaGTGCGTGGGCTGCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LPLRCYYNPAYCYISIHTCAGPP*CVGCLA Trigger: GGCCAAGCAGCCCACGCACCAGGGTGGGCCTGCACA...TGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR TCA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACGCCCACAGGGGAGGTaGCGTCCACAGGCACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPRPQGR*RPQAQP Trigger: GGGCTGTGCCTGTGGACGTCACCTCCCCTGTGGGCG...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR TCA 90 bp | TGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATGGGCTGTGCACACACTaGGCCCCGCGGATCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: CPFAATTTQLIVTFLSTHGLCTH*APRISS Trigger: GGAGCTGATCCGCGGGGCTCAGTGTGTGCACAGCCC...ATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR GCA 90 bp | CTTCCCAGCAGATGTGTGAGCTGCAACAAAGACAGAGTCGTGCTGCTCCAAGTGGGATCCGTCTTCCTCTaGCATTTTCGAGTCGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: LPSRCVSCNKDRVVLLQVGSVFL*HFRVAP Trigger: CGGAGCGACTCGAAAATGGCAGAGGAAGACGGATCC...CACTTGGAGCAGCACGACTCTGTCTTTGTTGCAGCTCACACATCTGCTGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| CDS-3UTR CCA 90 bp | TCTTCCCAGCAGATGTGTGAGCTGCAACAAAGACAGAGTCGTGCTGCTCCAAGTAAGGTCAGATGGGACTaGAGTCTCCACGGCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SSQQMCELQQRQSRAAPSKVRWD*SLHGSQ Trigger: CTGGCTGCCGTGGAGACTCCAGTCCCATCTGACCTT...ACTTGGAGCAGCACGACTCTGTCTTTGTTGCAGCTCACACATCTGCTGGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
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| CDS-3UTR CCA 90 bp | TATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACCTGGGAGGCTGGCCCTaGAGGCCGGCGAAGGGACAA | + |
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Preference number: 4 (lower is better) Translates to: YLPLRCYYNPAYCYISIHLGGWP*RPAKGQ Trigger: TTGTCCCTTCGCCGGCCTCCAGGGCCAGCCTCCCAG...GTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR TCA 90 bp | CTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACACACGGCAGCCAGGAGTaGCCAGGGATCCGTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LPLRCYYNPAYCYISIHTHGSQE*PGIRLP Trigger: AGGAAGACGGATCCCTGGTCACTCCTGGCTGCCGTG...TGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR GCA 90 bp | AACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACGGCCATGGGGGAGAGTaGTCTCTGGAGGCCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: NMVGIKLKEIYLPLRCYYGHGGE*SLEALA Trigger: TGCCAGGGCCTCCAGAGAGCACTCTCCCCCATGGCC...GTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CCA 90 bp | CTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACAGCTCTCTGGAGGCCCTaGCACGTTCAGCAGCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LPLRCYYNPAYCYISIHTALWRP*HVQQLP Trigger: TGGGAGCTGCTGAACGTGCCAGGGCCTCCAGAGAGC...TGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CCA 90 bp | CTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATTCCTGGCACAGATCTaGGGCGCATGGAGGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LPLRCYYNPAYCYISIHTFLAQI*GAWREA Trigger: GGCCTCCCTCCATGCGCCCCAGATCTGTGCCAGGAA...TGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CCA 90 bp | AACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACGGTGCGTGGGCTGCTTaGCCCCGAAAGTCTGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: NMVGIKLKEIYLPLRCYYGAWAA*PRKSGR Trigger: ACGCCCAGACTTTCGGGGCCAAGCAGCCCACGCACC...GTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CCA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCAGCCCACCCTGGTGCGTaGGCTGCTTGGCCCCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPAHPGA*AAWPRK Trigger: CTTTCGGGGCCAAGCAGCCCACGCACCAGGGTGGGC...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CCA 90 bp | AACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACGGCAGGATGCCGCTGTaGTGCACACCTAGGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: NMVGIKLKEIYLPLRCYYGRMPL*CTPRPR Trigger: CCGAGGCCTAGGTGTGCACCACAGCGGCATCCTGCC...GTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CCA 90 bp | CCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATCCCTCCTGGCTGGAGCTTaGCCACGGTGTGCTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: PLRCYYNPAYCYISIHTSLLAGA*PRCAHR Trigger: CCTGTGAGCACACCGTGGCCAAGCTCCAGCCAGGAG...GGATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CCA 90 bp | CTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACAGCCACATCTCCTGGCTaGAGCTTGGCCACGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LPLRCYYNPAYCYISIHTATSPG*SLATVC Trigger: GCACACCGTGGCCAAGCTCCAGCCAGGAGATGTGGC...TGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CCA 90 bp | TTTCAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCAGGGTACTTGGGAGCTaGTCGCCAGGGTCCCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: FQNMVGIKLKEIYLPLRCRVLGS*SPGSPG Trigger: CCCCGGGGACCCTGGCGACCAGCTCCCAAGTACCCT...GCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR TCA 90 bp | CCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATCCGCCGGGCAACCGTGCTaGTCACATAGATCTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PLRCYYNPAYCYISIHTSAGQPC*SHRSAS Trigger: GGAGGCAGATCTATGTGATCAGCACGGTTGCCCGGC...GGATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR TCA 90 bp | AACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACAGGCCACAGGCCACCTaGACCTCGCCAATCCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: NMVGIKLKEIYLPLRCYYRPQAT*TSPIRL Trigger: CAAGCGGATTGGCGAGGTTCAGGTGGCCTGTGGCCT...GTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR GCA 90 bp | AAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTGTGAGGCCCGAAGCCTaGTCATCACAGCGGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: KTWLASNSKRFICPFAATVRPEA*SSQRPR Trigger: CCGAGGCCGCTGTGATGAGCAGGCTTCGGGCCTCAC...AGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR GCA 90 bp | TATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACGGTGTAGAGGCTGGCTaGGAAGACGATGTCCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: YLPLRCYYNPAYCYISIHGVEAG*EDDVPP Trigger: CGGCGGGACATCGTCTTCGCAGCCAGCCTCTACACC...GTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CCA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACAGATCTGGGGCGCATaGAGGGAGGCCATGGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPQIWGA*REAMGE Trigger: CTCCCCCATGGCCTCCCTCCATGCGCCCCAGATCTG...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CCA 90 bp | TGTCTTCCCAGCAGATGTGTGAGCTGCAACAAAGACAGAGTCGTGCTGCTCCAATATATGGCCTGTGGTTaGGTGTCTCTGGGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLPSRCVSCNKDRVVLLQYMACG*VSLGLK Trigger: CTTCAGGCCCAGAGACACCCAACCACAGGCCATATA...TTGGAGCAGCACGACTCTGTCTTTGTTGCAGCTCACACATCTGCTGGGAAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
||
| CDS-3UTR CCA 90 bp | AACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACGGGGCACATCTGGAGTaGCTGGCCCCTTGTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NMVGIKLKEIYLPLRCYYGAHLE*LAPCPL Trigger: CAAGGGACAAGGGGCCAGCCACTCCAGATGTGCCCC...GTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACTGGGTGGGGCACATCTaGAGTGGCTGGCCCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YLPLRCYYNPAYCYISIHWVGHI*SGWPLV Trigger: GACAAGGGGCCAGCCACTCCAGATGTGCCCCACCCA...GTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATGGCAGCCACATCTCCTaGCTGGAGCTTGGCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: CPFAATTTQLIVTFLSTHGSHIS*LELGHG Trigger: ACCGTGGCCAAGCTCCAGCCAGGAGATGTGGCTGCC...ATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | CCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATCCCCCGCCGTAACAAGGTaGCTGCCGTCTCCATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLRCYYNPAYCYISIHTSPAVTR*LPSPSW Trigger: CCAAGATGGAGACGGCAGCCACCTTGTTACGGCGGG...GGATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR TCA 90 bp | TGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATGGGTGTCTCTGGGCCTaGAGGTCAGATGGGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CPFAATTTQLIVTFLSTHGCLWA*RSDGTG Trigger: TCCAGTCCCATCTGACCTTCAGGCCCAGAGACACCC...ATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | CCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATCCAGGCGGAACTGGGACTaGAGTTGGGATGGTTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLRCYYNPAYCYISIHTSRRNWD*SWDGFP Trigger: GGGGAAACCATCCCAACTTCAGTCCCAGTTCCGCCT...GGATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | AACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACTCATGTCCTCCACTCTaGGGGCATCCACCCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NMVGIKLKEIYLPLRCYYSCPPL*GHPPAA Trigger: TGCTGCGGGTGGATGCCCTCAGAGTGGAGGACATGA...GTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | TGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATAGACGCAGCAGCTCCTaGACAGCAGTGGTCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CPFAATTTQLIVTFLSTHRRSSS*TAVVTA Trigger: GGCTGTGACCACTGCTGTTCAGGAGCTGCTGCGTCT...ATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | TTTCAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCGCTCCCAACGGCCAGTaGACCCCACTTCCAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQNMVGIKLKEIYLPLRCAPNGQ*TPLPEL Trigger: GAGCTCTGGAAGTGGGGTGCACTGGCCGTTGGGAGC...GCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | TATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACAGGAAGAGCTCGCCCTaGGTCTTGGGGCTGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLPLRCYYNPAYCYISIHRKSSP*VLGLFP Trigger: AGGGAACAGCCCCAAGACGCAGGGCGAGCTCTTCCT...GTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCAAGGATGCCGCTGTGGTaGACACCTAGGCCTCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPRMPLW*TPRPRR Trigger: TCGCCGAGGCCTAGGTGTGCACCACAGCGGCATCCT...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | CTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACAGGGCCTTGCTGTCCTTaGGGGATGGGAACTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPLRCYYNPAYCYISIHTGPCCP*GMGTLR Trigger: TCTCAGAGTTCCCATCCCGCAAGGACAGCAAGGCCC...TGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | TATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACAGGTCAGCCAGAGCCTaGTCATGGGCCTTGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YLPLRCYYNPAYCYISIHRSARA*SWALLS Trigger: GGACAGCAAGGCCCATGAGCAGGCTCTGGCTGACCT...GTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | TATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACGGAGCAGCTCATGGCTaGTCATGGCACAGGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: YLPLRCYYNPAYCYISIHGAAHG*SWHRPL Trigger: GAGTGGCCTGTGCCATGAGCAGCCATGAGCTGCTCC...GTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CCA 90 bp | TATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACCATGGAGGGAGGCCATaGGGGAGAGTGCTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YLPLRCYYNPAYCYISIHHGGRP*GRVLSG Trigger: TCCAGAGAGCACTCTCCCCCATGGCCTCCCTCCATG...GTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACGCTCCTGAACAGCAGTaGTCACAGCCGCAAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YLPLRCYYNPAYCYISIHAPEQQ*SQPQGE Trigger: CTCCCCTTGCGGCTGTGACCACTGCTGTTCAGGAGC...GTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACGCAGCTTCACGTACTaGGCAGGAAACCGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPRSFTY*AGNRGL Trigger: CAGCCCCCGGTTTCCTGCCCAGTACGTGAAGCTGCG...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TTTCAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCGCTCATGGCTGCTCATaGCACAGGCCACTCGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQNMVGIKLKEIYLPLRCAHGCS*HRPLGL Trigger: CAGGCCGAGTGGCCTGTGCCATGAGCAGCCATGAGC...GCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | CAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACGTGAGGAGCAGCTCATaGCTGCTCATGGCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QNMVGIKLKEIYLPLRCYVRSSS*LLMAQA Trigger: GGCCTGTGCCATGAGCAGCCATGAGCTGCTCCTCAC...GTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACCTGCCGTCTCCATCTTaGCACCCAGCACAGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YLPLRCYYNPAYCYISIHLPSPS*HPAQAH Trigger: GTGAGCCTGTGCTGGGTGCCAAGATGGAGACGGCAG...GTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | CCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATCCACTGGGTGTAGAGGCTaGCTGCGAAGACGATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLRCYYNPAYCYISIHTSTGCRG*LRRRCP Trigger: GGGACATCGTCTTCGCAGCCAGCCTCTACACCCAGT...GGATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | CAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACACTCCAGGTCTCGGATaGCGTCGGAGCCACTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QNMVGIKLKEIYLPLRCYTPGLG*RRSHCT Trigger: TGTACAGTGGCTCCGACGTCATCCGAGACCTGGAGT...GTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | CAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACGGCCTCGGGAGAAGGTaGACACTACCACTGGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: QNMVGIKLKEIYLPLRCYGLGRR*TLPLAT Trigger: AGTTGCCAGTGGTAGTGTTCACCTTCTCCCGAGGCC...GTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | ATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACAACCGTGCAAGGCAGCGCTaGAGGAAGAGGTGGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MVGIKLKEIYLPLRCYYNRARQR*RKRWIS Trigger: TGAGATCCACCTCTTCCTGCAGCGCTGCCTTGCACG...GTTGTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | ATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACAACAAGGGTTGGGGGTCCTaGTGGATAGGACTGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MVGIKLKEIYLPLRCYYNKGWGS*WIGLSQ Trigger: CTGGCTCAGTCCTATCCAGCAGGACCCCCAACCCTT...GTTGTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR GCA 90 bp | AACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACGCCAGAGAGCAGAGCTaGGATTTCCTCTGGTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NMVGIKLKEIYLPLRCYYAREQS*DFLWSQ Trigger: CTGCGACCAGAGGAAATCGCAGCTCTGCTCTCTGGC...GTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACAAGGTCAGATGGGACTaGAGTCTCCACGGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YLPLRCYYNPAYCYISIHKVRWD*SLHGSQ Trigger: CTGGCTGCCGTGGAGACTCCAGTCCCATCTGACCTT...GTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCAGGTGAACACTACCACTaGCAACTGAGCCCGGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPGEHYH*QLSPGP Trigger: CGGACCCGGGCTCAGTTGCCAGTGGTAGTGTTCACC...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | CTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACACAAACACCACCGTCCTaGCTGGCATGTTTACCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLRCYYNPAYCYISIHTQTPPS*LACLPP Trigger: TGGGGGTAAACATGCCAGCCAGGACGGTGGTGTTTG...TGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | CTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACAAGCACCTCTACACGCTaGTGGTACTCAGGGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPLRCYYNPAYCYISIHTSTSTR*WYSGSS Trigger: ACTGCTCCCTGAGTACCACCAGCGTGTAGAGGTGCT...TGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CCA 90 bp | AACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACAACTCCTCCACTGTCTaGTTCAGGCCACAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NMVGIKLKEIYLPLRCYYNSSTV*FRPQAT Trigger: GGTGGCCTGTGGCCTGAACCAGACAGTGGAGGAGTT...GTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | CTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACAGCGGGATGGGAACTCTaGGAAGCTCCTCTTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPLRCYYNPAYCYISIHTAGWEL*EAPLHH Trigger: ATGATGAAGAGGAGCTTCTCAGAGTTCCCATCCCGC...TGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | TTTCAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCCCTGCTGGTGGAGTTTaGGGAGACCTGCAGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: FQNMVGIKLKEIYLPLRCPAGGV*GDLQDH Trigger: GTGATCCTGCAGGTCTCCTCAAACTCCACCAGCAGG...GCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | TTTCAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCATCCTCCAAGCTGCTTaGTCGGACCAGGGGAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: FQNMVGIKLKEIYLPLRCILQAA*SDQGST Trigger: GGTACTCCCCTGGTCCGAGCAAGCAGCTTGGAGGAT...GCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | TGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATAAGACAGAGTCGTGCTaGTCCAAGTGCAGGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CPFAATTTQLIVTFLSTHKTESC*SKCRMA Trigger: GGCCATCCTGCACTTGGAGCAGCACGACTCTGTCTT...ATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TTTCAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCAGCTGCTCTGCTTCCTaGCACAGATCTGGGGCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FQNMVGIKLKEIYLPLRCSCSAS*HRSGAH Trigger: ATGCGCCCCAGATCTGTGCCAGGAAGCAGAGCAGCT...GCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | AAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTATCTCAGCCAGACGCTaGATGCAGCGGACGACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KTWLASNSKRFICPFAATISARR*MQRTTK Trigger: CTTGGTCGTCCGCTGCATCCAGCGTCTGGCTGAGAT...AGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | CAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACCTCTCCATTTCCTTCTaGATCTGCATTCGCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QNMVGIKLKEIYLPLRCYLSISF*ICIRSR Trigger: GCGGGAGCGAATGCAGATTCAGAAGGAAATGGAGAG...GTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | TATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACGACGACAGAAACAGCTaGTCTGCTTCCTGGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: YLPLRCYYNPAYCYISIHDDRNS*SASWHR Trigger: TCTGTGCCAGGAAGCAGAGCAGCTGTTTCTGTCGTC...GTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACTATATGGCCTGTGGTTaGGTGTCTCTGGGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YLPLRCYYNPAYCYISIHYMACG*VSLGLK Trigger: CTTCAGGCCCAGAGACACCCAACCACAGGCCATATA...GTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACAAACTCCAGGGCATTaGGGACGGTGGCACTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPQTPGH*GRWHSE Trigger: TTCTGAGTGCCACCGTCCCCAATGCCCTGGAGTTTG...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | AAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTCGCTGCAGGAAGAGGTaGATCTCACTCTTCTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: KTWLASNSKRFICPFAATRCRKR*ISLFSE Trigger: CTCGGAGAAGAGTGAGATCCACCTCTTCCTGCAGCG...AGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | CCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATCCGCATGTTTACCCCCATaGCAAAAGTCTCGGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLRCYYNPAYCYISIHTSACLPP*QKSRWQ Trigger: TTGCCACCGAGACTTTTGCCATGGGGGTAAACATGC...GGATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | CTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACACATCATGTTTGCGCATaGAGTCAAACACCACCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPLRCYYNPAYCYISIHTHHVCA*SQTPPS Trigger: GGACGGTGGTGTTTGACTCCATGCGCAAACATGATG...TGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACGCTGGATCATGTTCTaGGTCTCTGTCAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPRWIMF*VSVSSS Trigger: GGAGGAGCTGACAGAGACCCAGAACATGATCCAGCG...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | CAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTGGCCCCTTGTCCCTTaGGTTATCAGACACAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QNMVGIKLKEIYLPLRCYWPLVP*VIRHNR Trigger: CCTGTTGTGTCTGATAACCCAAGGGACAAGGGGCCA...GTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | ATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACAACATAAGGTCATCTGGGTaGGGCACATCTGGAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MVGIKLKEIYLPLRCYYNIRSSG*GTSGVA Trigger: AGCCACTCCAGATGTGCCCCACCCAGATGACCTTAT...GTTGTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATGCCTATAAGGTCATCTaGGTGGGGCACATCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CPFAATTTQLIVTFLSTHAYKVI*VGHIWS Trigger: ACTCCAGATGTGCCCCACCCAGATGACCTTATAGGC...ATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCAAGCAGTAACAGCGACTaGTCAGACAGGAGGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPSSNSD*SDRRKR Trigger: GCGCTTCCTCCTGTCTGACCAGTCGCTGTTACTGCT...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | ATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACAACTTCCCAGCAGATGTGTaGGCTGCAACAAAGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MVGIKLKEIYLPLRCYYNFPADV*AATKTE Trigger: CTCTGTCTTTGTTGCAGCTCACACATCTGCTGGGAA...GTTGTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCAGGACTTCATCAAAGATaGCCCACTCCAGGTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPGLHQR*PTPGLG Trigger: TCCGAGACCTGGAGTGGGTCATCTTTGATGAAGTCC...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCATGGCACTCAGAAGGATaGTGGAGACGTGCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPWHSEG*WRRAQE Trigger: TTCCTGAGCACGTCTCCATCATCCTTCTGAGTGCCA...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | CAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACGGATCATGGTATATGTaGGGCGGAACTGGGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QNMVGIKLKEIYLPLRCYGSWYM*GGTGTE Trigger: TTCAGTCCCAGTTCCGCCTCACATATACCATGATCC...GTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | AACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACCATTCACAGACTCCATaGTGCGTCGCTGGATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NMVGIKLKEIYLPLRCYYHSQTP*CVAGSC Trigger: ACATGATCCAGCGACGCATCATGGAGTCTGTGAATG...GTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | AAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTCAGAAACAGCTGCTCTaGTTCCTGGCACAGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTWLASNSKRFICPFAATQKQLL*FLAQIW Trigger: CCAGATCTGTGCCAGGAAGCAGAGCAGCTGTTTCTG...AGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | TTTCAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCGGATCCGTCTTCCTCTaGCATTTTCGAGCTGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FQNMVGIKLKEIYLPLRCGSVFL*HFRAEC Trigger: GCACTCAGCTCGAAAATGGCAGAGGAAGACGGATCC...GCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | CTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATATGCAGATCAGTTATaGTGGGCTCATCCATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPLRCYYNPAYCYISIHTYADQL*WAHPSH Trigger: GTGGGATGGATGAGCCCAGCATAACTGATCTGCATA...TGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | ATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACAACACAAAGACAGAGTCGTaGTGCTCCAAGTGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: MVGIKLKEIYLPLRCYYNTKTES*CSKCRM Trigger: CATCCTGCACTTGGAGCAGCACGACTCTGTCTTTGT...GTTGTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | CCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATCCAGCAGATGTGTGAGCTaGAACAAAGACAGAGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLRCYYNPAYCYISIHTSSRCVS*NKDRVV Trigger: CACGACTCTGTCTTTGTTGCAGCTCACACATCTGCT...GGATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | TGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATAAGTCTGGGCGTGCTTaGTCATCCTCTCTTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CPFAATTTQLIVTFLSTHKSGRA*SSSLSW Trigger: CCAAGAAAGAGAGGATGAGCAAGCACGCCCAGACTT...ATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | TTTCAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACCACCCTTCCCACTaGGAGAGATTTCAGCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: FQNMVGIKLKEIYLPLRCYHPSH*ERFQPI Trigger: AATGGGCTGAAATCTCTCTCAGTGGGAAGGGTGGTA...GCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | AACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACTCGCAGAGCGCTCAGTaGATTGTCAAACATGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NMVGIKLKEIYLPLRCYYSQSAQ*IVKHEF Trigger: GAACTCATGTTTGACAATGCACTGAGCGCTCTGCGA...GTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | CTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACACTTCTGAAACACATCTaGCTCAAATGCCCACTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPLRCYYNPAYCYISIHTLLKHI*LKCPLE Trigger: TTCCAGTGGGCATTTGAGCCAGATGTGTTTCAGAAG...TGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCAGCTCCAAGTGCAGGATaGCCTGCTTCTGAAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPAPSAG*PASETH Trigger: ATGTGTTTCAGAAGCAGGCCATCCTGCACTTGGAGC...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | CCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATCCAAGTCCCGAAACTTCTaGTTGCTCAGGGCTTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: PLRCYYNPAYCYISIHTSKSRNF*LLRALI Trigger: TATCAAAGCCCTGAGCAACCAGAAGTTTCGGGACTT...GGATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATTCATCCTCTCTTTCTTaGCCTCCACTGCAGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: CPFAATTTQLIVTFLSTHSSSLS*PPLQHS Trigger: ACTATGCTGCAGTGGAGGCCAAGAAAGAGAGGATGA...ATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR CCA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCATCCATGATGCGTCGCTaGATCATGTTCTGGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPSMMRR*IMFWVS Trigger: AGAGACCCAGAACATGATCCAGCGACGCATCATGGA...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACAAGGAGGTTGTAGCTaGCAGATTTGTGTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPQGGCS*QICVLQ Trigger: CTGGAGAACACAAATCTGTCAGCTACAACCTCCTTG...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | AAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTAGGATGGCCTGCTTCTaGAACACATCTGGCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KTWLASNSKRFICPFAATRMACF*NTSGSN Trigger: ATTTGAGCCAGATGTGTTTCAGAAGCAGGCCATCCT...AGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR TCA 90 bp | TGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATACACCCAGTGCATTGTaGTGTTCCTCATTCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: CPFAATTTQLIVTFLSTHTPSAL*CSSFFT Trigger: TGTGAAGAATGAGGAACATCACAATGCACTGGGTGT...ATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS-3UTR GCA 90 bp | CCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATCCCTGAATTTTGGTTGCTaGCTCTTGCTAAAGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLRCYYNPAYCYISIHTSLNFGC*LLLKSS Trigger: TGAGGACTTTAGCAAGAGGCAGCAACCAAAATTCAG...GGATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS TCA 90 bp | CGCAGCTTCACGTACTGGGCAGGAAACCGGGGGCTGTGCACACACTaGGCCCCGCGGATCAGCTCCTCCAGCTTCCGGGCCCGGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSFTYWAGNRGLCTH*APRISSSSFRARSP Trigger: TGGGCTCCGGGCCCGGAAGCTGGAGGAGCTGATCCGCGGGGCTCAGTGTGTGCACAGCCCCCGGTTTCCTGCCCAGTACGTGAAGCTGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS GCA 90 bp | TGGGCTCATCCATCCCACCTGGCCAGAAAGGGTACTGTGTTGGATTaGCCCATAGCGACTGGGAGGCTGGCCCTGGAGGCCGGCGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WAHPSHLARKGTVLD*PIATGRLALEAGEG Trigger: CCCTTCGCCGGCCTCCAGGGCCAGCCTCCCAGTCGCTATGGGGCAATCCAACACAGTACCCTTTCTGGCCAGGTGGGATGGATGAGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000172966.2 |
||
| CDS CCA 90 bp | TGTTTGAGGGTACTTGGGAGCTGGTCGCCAGGGTCCCCGGGGCTCTaGCACACCAGGCCAGAGAGCAGAGCTGCGATTTCCTCTGGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: CLRVLGSWSPGSPGL*HTRPESRAAISSGR Trigger: GCGACCAGAGGAAATCGCAGCTCTGCTCTCTGGCCTGGTGTGCCAGAGCCCCGGGGACCCTGGCGACCAGCTCCCAAGTACCCTCAAACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS CCA 90 bp | TGTGCAGGCCCACCCTGGTGCGTGGGCTGCTTGGCCCCGAAAGTCTaGGCGTGCTTGCTCATCCTCTCTTTCTTGGCCTCCACTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CAGPPWCVGCLAPKV*ACLLILSFLASTAA Trigger: TGCTGCAGTGGAGGCCAAGAAAGAGAGGATGAGCAAGCACGCCCAGACTTTCGGGGCCAAGCAGCCCACGCACCAGGGTGGGCCTGCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS CCA 90 bp | AGCCTGCTCATCACAGCGGCCTCGGGAGAAGGTGAACACTACCACTaGCAACTGAGCCCGGGTCCGGAGGGAAGCCAGCAGGGACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SLLITAASGEGEHYH*QLSPGPEGSQQGQV Trigger: TACCTGTCCCTGCTGGCTTCCCTCCGGACCCGGGCTCAGTTGCCAGTGGTAGTGTTCACCTTCTCCCGAGGCCGCTGTGATGAGCAGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS GCA 90 bp | TGGGGTAGCTGTCGGTCAGAGCCTCGGAGCCGTGCAAGGCAGCGCTaGAGGAAGAGGTGGATCTCACTCTTCTCCGAGCTTGTCGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WGSCRSEPRSRARQR*RKRWISLFSELVVR Trigger: CCTCACGACAAGCTCGGAGAAGAGTGAGATCCACCTCTTCCTGCAGCGCTGCCTTGCACGGCTCCGAGGCTCTGACCGACAGCTACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS GCA 90 bp | GGCTCCTCCAAAGCCCCCAGCCTCTTGGTGAGGTCAGCCAGAGCCTaGTCATGGGCCTTGCTGTCCTTGCGGGATGGGAACTCTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSSKAPSLLVRSARA*SWALLSLRDGNSEK Trigger: CTTCTCAGAGTTCCCATCCCGCAAGGACAGCAAGGCCCATGAGCAGGCTCTGGCTGACCTCACCAAGAGGCTGGGGGCTTTGGAGGAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000173415.2 |
||
| CDS GCA 90 bp | GCCAGGGTCCCCGGGGCTCTGGCACACCAGGCCAGAGAGCAGAGCTaGGATTTCCTCTGGTCGCAGAGCGCTCAGTGCATTGTCAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: ARVPGALAHQAREQS*DFLWSQSAQCIVKH Trigger: ATGTTTGACAATGCACTGAGCGCTCTGCGACCAGAGGAAATCGCAGCTCTGCTCTCTGGCCTGGTGTGCCAGAGCCCCGGGGACCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS CCA 90 bp | CCACCTGGCCAGAAAGGGTACTGTGTTGGATTGCCCCATAGCGACTaGGAGGCTGGCCCTGGAGGCCGGCGAAGGGACAAGGAGGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PPGQKGYCVGLPHSD*EAGPGGRRRDKEVV Trigger: TACAACCTCCTTGTCCCTTCGCCGGCCTCCAGGGCCAGCCTCCCAGTCGCTATGGGGCAATCCAACACAGTACCCTTTCTGGCCAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000172966.2 |
||
| CDS CCA 90 bp | CCCATTCACCCGGAGCACTTTGGTAGAGATGGCAGCCACATCTCCTaGCTGGAGCTTGGCCACGGTGTGCTCACAGGGCCCTTCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PIHPEHFGRDGSHIS*LELGHGVLTGPFRQ Trigger: CTGCCTGAAGGGCCCTGTGAGCACACCGTGGCCAAGCTCCAGCCAGGAGATGTGGCTGCCATCTCTACCAAAGTGCTCCGGGTGAATGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000173415.2 |
||
| CDS TCA 90 bp | GGCCTGAAGGTCAGATGGGACTGGAGTCTCCACGGCAGCCAGGAGTaGCCAGGGATCCGTCTTCCTCTGCCATTTTCGAGTCGCTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLKVRWDWSLHGSQE*PGIRLPLPFSSRSV Trigger: GACGGAGCGACTCGAAAATGGCAGAGGAAGACGGATCCCTGGTCACTCCTGGCTGCCGTGGAGACTCCAGTCCCATCTGACCTTCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172966.2 |
||
| CDS GCA 90 bp | CACCCTGGTGCGTGGGCTGCTTGGCCCCGAAAGTCTGGGCGTGCTTaGTCATCCTCTCTTTCTTGGCCTCCACTGCAGCATAGTACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HPGAWAAWPRKSGRA*SSSLSWPPLQHSTP Trigger: AGGGGTACTATGCTGCAGTGGAGGCCAAGAAAGAGAGGATGAGCAAGCACGCCCAGACTTTCGGGGCCAAGCAGCCCACGCACCAGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS GCA 90 bp | CGTCTCCATCTTGGCACCCAGCACAGGCTCACCCACCAAACGTGCTaGTCCTCGAAGCGAGCGACACATCTCAGCCAGACGCTGGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLHLGTQHRLTHQTC*SSKRATHLSQTLDA Trigger: TGCATCCAGCGTCTGGCTGAGATGTGTCGCTCGCTTCGAGGAGCAGCACGTTTGGTGGGTGAGCCTGTGCTGGGTGCCAAGATGGAGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS GCA 90 bp | TGCCGTCTCCATCTTGGCACCCAGCACAGGCTCACCCACCAAACGTaGTGCTCCTCGAAGCGAGCGACACATCTCAGCCAGACGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CRLHLGTQHRLTHQT*CSSKRATHLSQTLD Trigger: ATCCAGCGTCTGGCTGAGATGTGTCGCTCGCTTCGAGGAGCAGCACGTTTGGTGGGTGAGCCTGTGCTGGGTGCCAAGATGGAGACGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS CCA 90 bp | CGGTCAGAGCCTCGGAGCCGTGCAAGGCAGCGCTGCAGGAAGAGGTaGATCTCACTCTTCTCCGAGCTTGTCGTGAGGTCTAGAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSEPRSRARQRCRKR*ISLFSELVVRSREV Trigger: CACCTCTCTAGACCTCACGACAAGCTCGGAGAAGAGTGAGATCCACCTCTTCCTGCAGCGCTGCCTTGCACGGCTCCGAGGCTCTGACCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS CCA 90 bp | CGAAGACGATGTCCCGCCGTAACAAGGTGGCTGCCGTCTCCATCTTaGCACCCAGCACAGGCTCACCCACCAAACGTGCTGCTCCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: RRRCPAVTRWLPSPS*HPAQAHPPNVLLLE Trigger: TTCGAGGAGCAGCACGTTTGGTGGGTGAGCCTGTGCTGGGTGCCAAGATGGAGACGGCAGCCACCTTGTTACGGCGGGACATCGTCTTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS GCA 90 bp | AGGATCTCCGTGGTCATGATGAGGCAGGAGGCCTCTGGGTGCAGCTaGACATCCCCTGTGAGCAGCCCTACATCCCCAAATGTGTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RISVVMMRQEASGCS*TSPVSSPTSPNVFR Trigger: CCGGAACACATTTGGGGATGTAGGGCTGCTCACAGGGGATGTGCAGCTGCACCCAGAGGCCTCCTGCCTCATCATGACCACGGAGATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS GCA 90 bp | TTCTCCGAGCTTGTCGTGAGGTCTAGAGAGGTGAGGCCCGAAGCCTaGTCATCACAGCGGCCTCGGGAGAAGGTGAACACTACCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FSELVVRSREVRPEA*SSQRPREKVNTTTG Trigger: GCCAGTGGTAGTGTTCACCTTCTCCCGAGGCCGCTGTGATGAGCAGGCTTCGGGCCTCACCTCTCTAGACCTCACGACAAGCTCGGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS GCA 90 bp | GATCAGCTCCTCCAGCTTCCGGGCCCGGAGCCCACCTTCTACCACTaGCACATCCTTGAGTTGCAGGTCGTTGATAGGGTCAAGGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: DQLLQLPGPEPTFYH*HILELQVVDRVKGW Trigger: CCAACCCTTGACCCTATCAACGACCTGCAACTCAAGGATGTGGCAGTGGTAGAAGGTGGGCTCCGGGCCCGGAAGCTGGAGGAGCTGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS CCA 90 bp | CATGGAGCGAAGGATCTCCGTGGTCATGATGAGGCAGGAGGCCTCTaGGTGCAGCTGCACATCCCCTGTGAGCAGCCCTACATCCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HGAKDLRGHDEAGGL*VQLHIPCEQPYIPK Trigger: TTTGGGGATGTAGGGCTGCTCACAGGGGATGTGCAGCTGCACCCAGAGGCCTCCTGCCTCATCATGACCACGGAGATCCTTCGCTCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 90 bp | AGCATTTCCACAATCTCCTTAAGGATGGGCAGGATGCCGCTGTGGTaGACACCTAGGCCTCGGCGAAGGAGCTCCGACATGTGCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SISTISLRMGRMPLW*TPRPRRRSSDMCRT Trigger: GGTCCTGCACATGTCGGAGCTCCTTCGCCGAGGCCTAGGTGTGCACCACAGCGGCATCCTGCCCATCCTTAAGGAGATTGTGGAAATGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CCA 90 bp | CACTGCCACATCCTTGAGTTGCAGGTCGTTGATAGGGTCAAGGGTTaGGGGTCCTGCTGGATAGGACTGAGCCAGACGCAGCAGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HCHILELQVVDRVKG*GSCWIGLSQTQQLL Trigger: CAGGAGCTGCTGCGTCTGGCTCAGTCCTATCCAGCAGGACCCCCAACCCTTGACCCTATCAACGACCTGCAACTCAAGGATGTGGCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS TCA 90 bp | GGAGGCTGGCCCTGGAGGCCGGCGAAGGGACAAGGAGGTTGTAGCTaGCAGATTTGTGTTCTCCAGCAGGACCTCCTTATAGCCCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GGWPWRPAKGQGGCS*QICVLQQDLLIAQY Trigger: ATACTGGGCTATAAGGAGGTCCTGCTGGAGAACACAAATCTGTCAGCTACAACCTCCTTGTCCCTTCGCCGGCCTCCAGGGCCAGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000172966.2 |
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| CDS TCA 90 bp | TCTCCCACAAACTCCTCCACTGTCTGGTTCAGGCCACAGGCCACCTaGACCTCGCCAATCCGCTTGGCCACAGCTTTGACTCGTTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: SPTNSSTVWFRPQAT*TSPIRLATALTRST Trigger: GGTAGAACGAGTCAAAGCTGTGGCCAAGCGGATTGGCGAGGTTCAGGTGGCCTGTGGCCTGAACCAGACAGTGGAGGAGTTTGTGGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CCA 90 bp | GCGCTCAGTGCATTGTCAAACATGAGTTCAGTGAGGAGCAGCTCATaGCTGCTCATGGCACAGGCCACTCGGCCTGCCAGCTTCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ALSALSNMSSVRSSS*LLMAQATRPASFTV Trigger: CACAGTGAAGCTGGCAGGCCGAGTGGCCTGTGCCATGAGCAGCCATGAGCTGCTCCTCACTGAACTCATGTTTGACAATGCACTGAGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CCA 90 bp | GGGGCTCTGGCACACCAGGCCAGAGAGCAGAGCTGCGATTTCCTCTaGTCGCAGAGCGCTCAGTGCATTGTCAAACATGAGTTCAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GALAHQAREQSCDFL*SQSAQCIVKHEFSE Trigger: CTCACTGAACTCATGTTTGACAATGCACTGAGCGCTCTGCGACCAGAGGAAATCGCAGCTCTGCTCTCTGGCCTGGTGTGCCAGAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CCA 90 bp | AAAAGCATTTCCACAATCTCCTTAAGGATGGGCAGGATGCCGCTGTaGTGCACACCTAGGCCTCGGCGAAGGAGCTCCGACATGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSISTISLRMGRMPL*CTPRPRRRSSDMCR Trigger: CCTGCACATGTCGGAGCTCCTTCGCCGAGGCCTAGGTGTGCACCACAGCGGCATCCTGCCCATCCTTAAGGAGATTGTGGAAATGCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 90 bp | GCCAGAGAGCAGAGCTGCGATTTCCTCTGGTCGCAGAGCGCTCAGTaGATTGTCAAACATGAGTTCAGTGAGGAGCAGCTCATGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AREQSCDFLWSQSAQ*IVKHEFSEEQLMAA Trigger: AGCAGCCATGAGCTGCTCCTCACTGAACTCATGTTTGACAATGCACTGAGCGCTCTGCGACCAGAGGAAATCGCAGCTCTGCTCTCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CCA 90 bp | CAGGAACAGCTTGAAGCCTATAAGGTCATCTGGGTGGGGCACATCTaGAGTGGCTGGCCCCTTGTCCCTTGGGTTATCAGACACAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QEQLEAYKVIWVGHI*SGWPLVPWVIRHNR Trigger: CCTGTTGTGTCTGATAACCCAAGGGACAAGGGGCCAGCCACTCCAGATGTGCCCCACCCAGATGACCTTATAGGCTTCAAGCTGTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000173415.2 |
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| CDS CCA 90 bp | TTGTGTTCTCCAGCAGGACCTCCTTATAGCCCAGTATATGGCCTGTaGTTGGGTGTCTCTGGGCCTGAAGGTCAGATGGGACTGGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LCSPAGPPYSPVYGL*LGVSGPEGQMGLES Trigger: AGACTCCAGTCCCATCTGACCTTCAGGCCCAGAGACACCCAACCACAGGCCATATACTGGGCTATAAGGAGGTCCTGCTGGAGAACACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000172966.2 |
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| CDS GCA 90 bp | AGTCTATCTCCTCCTCAGCTTCCTCCCGAGTATGCAGATCAGTTATaGTGGGCTCATCCATCCCACCTGGCCAGAAAGGGTACTGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSPPQLPPEYADQL*WAHPSHLARKGTVL Trigger: CAACACAGTACCCTTTCTGGCCAGGTGGGATGGATGAGCCCAGCATAACTGATCTGCATACTCGGGAGGAAGCTGAGGAGGAGATAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CCA 90 bp | AGAGCCATCATGTTTGCGCATGGAGTCAAACACCACCGTCCTGGCTaGCATGTTTACCCCCATGGCAAAAGTCTCGGTGGCAAACAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RAIMFAHGVKHHRPG*HVYPHGKSLGGKQD Trigger: GTCTTGTTTGCCACCGAGACTTTTGCCATGGGGGTAAACATGCCAGCCAGGACGGTGGTGTTTGACTCCATGCGCAAACATGATGGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | CTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACAGCTGCCGTCTCCATCTaGGCACCCAGCACAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPLRCYYNPAYCYISIHTAAVSI*APSTGS Trigger: TGAGCCTGTGCTGGGTGCCAAGATGGAGACGGCAGC...TGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | CTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACAGCAAACTCCAGGGCATaGGGGACGGTGGCACTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPLRCYYNPAYCYISIHTANSRA*GTVALR Trigger: TCTGAGTGCCACCGTCCCCAATGCCCTGGAGTTTGC...TGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS TCA 90 bp | CTGGTGGAGTTTGAGGAGACCTGCAGGATCACACCCAGTGCATTGTaGTGTTCCTCATTCTTCACAACTACCACCCTTCCCACTGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LVEFEETCRITPSAL*CSSFFTTTTLPTER Trigger: TCTCTCAGTGGGAAGGGTGGTAGTTGTGAAGAATGAGGAACATCACAATGCACTGGGTGTGATCCTGCAGGTCTCCTCAAACTCCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | AACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACGATCCTCCAAGCTGCTaGCTCGGACCAGGGGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: NMVGIKLKEIYLPLRCYYDPPSC*LGPGEY Trigger: GTACTCCCCTGGTCCGAGCAAGCAGCTTGGAGGATC...GTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCAAGCTCGCCCTGCGTCTaGGGGCTGTTCCCTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPSSPCV*GLFPVK Trigger: CTTCACAGGGAACAGCCCCAAGACGCAGGGCGAGCT...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCATCTCCTGGCTGGAGCTaGGCCACGGTGTGCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPSPGWS*ATVCSQ Trigger: CTGTGAGCACACCGTGGCCAAGCTCCAGCCAGGAGA...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | AAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTGGAGTGGCTGGCCCCTaGTCCCTTGGGTTATCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KTWLASNSKRFICPFAATGVAGP*SLGLSD Trigger: GTCTGATAACCCAAGGGACAAGGGGCCAGCCACTCC...AGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | TGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATACCTCGCCAATCCGCTaGGCCACAGCTTTGACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: CPFAATTTQLIVTFLSTHTSPIR*ATALTR Trigger: ACGAGTCAAAGCTGTGGCCAAGCGGATTGGCGAGGT...ATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS TCA 90 bp | TGCATTGTGATGTTCCTCATTCTTCACAACTACCACCCTTCCCACTaGGAGAGATTTCAGCCCATTCACAGACTCCATGATGCGTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CIVMFLILHNYHPSH*ERFQPIHRLHDASL Trigger: CAGCGACGCATCATGGAGTCTGTGAATGGGCTGAAATCTCTCTCAGTGGGAAGGGTGGTAGTTGTGAAGAATGAGGAACATCACAATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | TTTCAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCCCCTGCTGGTGGAGTTaGAGGAGACCTGCAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: FQNMVGIKLKEIYLPLRCPCWWS*RRPAGS Trigger: TGATCCTGCAGGTCTCCTCAAACTCCACCAGCAGGG...GCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | AAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTCGCTTGGCCACAGCTTaGACTCGTTCTACCCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KTWLASNSKRFICPFAATRLATA*TRSTPC Trigger: ACAGGGGGTAGAACGAGTCAAAGCTGTGGCCAAGCG...AGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCATTCACCCGGAGCACTTaGGTAGAGATGGCAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPFTRST*VEMAAT Trigger: TGTGGCTGCCATCTCTACCAAAGTGCTCCGGGTGAA...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCAAAATCCACCCCTTTCTaGAAGCCAGGTGGGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPKSTPF*KPGGTV Trigger: CACTGTCCCACCTGGCTTCAAGAAAGGGGTGGATTT...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | TGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATGTAGAGCCATCATGTTaGCGCATGGAGTCAAACACC | + |
|
Preference number: 5 (lower is better) Translates to: CPFAATTTQLIVTFLSTHVEPSC*RMESNT Trigger: GGTGTTTGACTCCATGCGCAAACATGATGGCTCTAC...ATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | TGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATGAACTGGGACTGAAGTaGGGATGGTTTCCCCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: CPFAATTTQLIVTFLSTHELGLK*GWFPHH Trigger: ATGATGGGGAAACCATCCCAACTTCAGTCCCAGTTC...ATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | TTATCTGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCAAAAGTCTGGGCGTGCTaGCTCATCCTCTCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSAPSLLLQPSLLLHFYPKVWAC*LILSFL Trigger: CAAGAAAGAGAGGATGAGCAAGCACGCCCAGACTTT...TGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | TGCCCCTTCGCTGCTACTACAACCCAGCTTATTGTTACATTTCTATCCACACATTCAGGCAGGAACAGCTaGAAGCCTATAAGGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: CPFAATTTQLIVTFLSTHSGRNS*KPIRSS Trigger: AGATGACCTTATAGGCTTCAAGCTGTTCCTGCCTGA...ATGTGTGGATAGAAATGTAACAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | ATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCTACTACAACTTTGGTTGCTGCCTCTaGCTAAAGTCCTCAGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: MVGIKLKEIYLPLRCYYNFGCCL*LKSSEI Trigger: GATCTCTGAGGACTTTAGCAAGAGGCAGCAACCAAA...GTTGTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS-3UTR CAA 90 bp | TTTCAAAACATGGTTGGCATCAAACTCAAAGAGATTTATCTGCCCCTTCGCTGCCTTTCTGAATTTTGGTaGCTGCCTCTTGCTAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FQNMVGIKLKEIYLPLRCLSEFW*LPLAKV Trigger: GACTTTAGCAAGAGGCAGCAACCAAAATTCAGAAAG...GCAGCGAAGGGGCAGATAAATCTCTTTGAGTTTGATGCCAACCATGTTTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 72 bp | AGGTACACCCCGCGGTCCTGTGCAGGCCCACCCTGGTaGGTGGGCTGCTTGGCCCCGAAAGTCTGGGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RYTPRSCAGPPW*VGCLAPKVWAC Trigger: GCACGCCCAGACTTTCGGGGCCAAGCAGCCCACGCACCAGGGTGGGCCTGCACAGGACCGCGGGGTGTACCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CCA 72 bp | GACAGGTACACCCCGCGGTCCTGTGCAGGCCCACCCTaGTGCGTGGGCTGCTTGGCCCCGAAAGTCTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: DRYTPRSCAGPP*CVGCLAPKVWA Trigger: CGCCCAGACTTTCGGGGCCAAGCAGCCCACGCACCAGGGTGGGCCTGCACAGGACCGCGGGGTGTACCTGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS TCA 72 bp | CTGCCATCTCAGGCACTCGGCCCTTACAGAGAAGGATaGCGGTGCCCGTGGGGTCCAGGCCCCTCCGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LPSQALGPYREG*RCPWGPGPSGL Trigger: CAGGCCGGAGGGGCCTGGACCCCACGGGCACCGTCATCCTTCTCTGTAAGGGCCGAGTGCCTGAGATGGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS TCA 72 bp | ACGTACTGGGCAGGAAACCGGGGGCTGTGCACACACTaGGCCCCGCGGATCAGCTCCTCCAGCTTCCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TYWAGNRGLCTH*APRISSSSFRA Trigger: GGCCCGGAAGCTGGAGGAGCTGATCCGCGGGGCTCAGTGTGTGCACAGCCCCCGGTTTCCTGCCCAGTACGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CAA 72 bp | CGGTCCTGTGCAGGCCCACCCTGGTGCGTGGGCTGCTaGGCCCCGAAAGTCTGGGCGTGCTTGCTCATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSCAGPPWCVGC*APKVWACLLIL Trigger: GAGGATGAGCAAGCACGCCCAGACTTTCGGGGCCAAGCAGCCCACGCACCAGGGTGGGCCTGCACAGGACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CCA 72 bp | TCCTGGCACAGATCTGGGGCGCATGGAGGGAGGCCATaGGGGAGAGTGCTCTCTGGAGGCCCTGGCACGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SWHRSGAHGGRP*GRVLSGGPGTF Trigger: GAACGTGCCAGGGCCTCCAGAGAGCACTCTCCCCCATGGCCTCCCTCCATGCGCCCCAGATCTGTGCCAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CCA 72 bp | GGTCCTGTGCAGGCCCACCCTGGTGCGTGGGCTGCTTaGCCCCGAAAGTCTGGGCGTGCTTGCTCATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPVQAHPGAWAA*PRKSGRACSSS Trigger: AGAGGATGAGCAAGCACGCCCAGACTTTCGGGGCCAAGCAGCCCACGCACCAGGGTGGGCCTGCACAGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CCA 72 bp | AGGCCTCGGCGAAGGAGCTCCGACATGTGCAGGACCTaGGGTAGCTGTCGGTCAGAGCCTCGGAGCCGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RPRRRSSDMCRT*GSCRSEPRSRA Trigger: TGCACGGCTCCGAGGCTCTGACCGACAGCTACCCCAGGTCCTGCACATGTCGGAGCTCCTTCGCCGAGGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS TCA 72 bp | GATAGTGCTCCAGGGGGACCGGCCGGGCAACCGTGCTaGTCACATAGATCTGCCTCCGCTTCAGCCGCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: DSAPGGPAGQPC*SHRSASASAAR Trigger: TCGGGCGGCTGAAGCGGAGGCAGATCTATGTGATCAGCACGGTTGCCCGGCCGGTCCCCCTGGAGCACTATC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS GCA 72 bp | TGCACACCTAGGCCTCGGCGAAGGAGCTCCGACATGTaGAGGACCTGGGGTAGCTGTCGGTCAGAGCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: CTPRPRRRSSDM*RTWGSCRSEPR Trigger: CCGAGGCTCTGACCGACAGCTACCCCAGGTCCTGCACATGTCGGAGCTCCTTCGCCGAGGCCTAGGTGTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS CCA 72 bp | GCTCCTCGAAGCGAGCGACACATCTCAGCCAGACGCTaGATGCAGCGGACGACCAAGCCCTCAGGGGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: APRSERHISARR*MQRTTKPSGVP Trigger: AGGGACCCCTGAGGGCTTGGTCGTCCGCTGCATCCAGCGTCTGGCTGAGATGTGTCGCTCGCTTCGAGGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS TCA 72 bp | CCGAAGCCTGCTCATCACAGCGGCCTCGGGAGAAGGTaGACACTACCACTGGCAACTGAGCCCGGGTCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: PKPAHHSGLGRR*TLPLATEPGSG Trigger: TCCGGACCCGGGCTCAGTTGCCAGTGGTAGTGTTCACCTTCTCCCGAGGCCGCTGTGATGAGCAGGCTTCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS GCA 72 bp | CCATCCCACCTGGCCAGAAAGGGTACTGTGTTGGATTaGCCCATAGCGACTGGGAGGCTGGCCCTGGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PSHLARKGTVLD*PIATGRLALEA Trigger: GGCCTCCAGGGCCAGCCTCCCAGTCGCTATGGGGCAATCCAACACAGTACCCTTTCTGGCCAGGTGGGATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000172966.2 |
||
| CDS GCA 72 bp | CCCGGGGCTCTGGCACACCAGGCCAGAGAGCAGAGCTaGGATTTCCTCTGGTCGCAGAGCGCTCAGTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: PGALAHQAREQS*DFLWSQSAQCI Trigger: AATGCACTGAGCGCTCTGCGACCAGAGGAAATCGCAGCTCTGCTCTCTGGCCTGGTGTGCCAGAGCCCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS GCA 72 bp | CTCGAAGCGAGCGACACATCTCAGCCAGACGCTGGATaGAGCGGACGACCAAGCCCTCAGGGGTCCCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LEASDTSQPDAG*SGRPSPQGSLR Trigger: TCTCAGGGACCCCTGAGGGCTTGGTCGTCCGCTGCATCCAGCGTCTGGCTGAGATGTGTCGCTCGCTTCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
||
| CDS CCA 72 bp | CCACCCTGGTGCGTGGGCTGCTTGGCCCCGAAAGTCTaGGCGTGCTTGCTCATCCTCTCTTTCTTGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PPWCVGCLAPKV*ACLLILSFLAS Trigger: GGAGGCCAAGAAAGAGAGGATGAGCAAGCACGCCCAGACTTTCGGGGCCAAGCAGCCCACGCACCAGGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CAA 90 bp | GCGAAGACGATGTCCCGCCGTAACAAGGTGGCTGCCGTCTCCATCTaGGCACCCAGCACAGGCTCACCCACCAAACGTGCTGCTCCTCGA | + |
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Preference number: 6 (lower is better) Translates to: AKTMSRRNKVAAVSI*APSTGSPTKRAAPR Trigger: TCGAGGAGCAGCACGTTTGGTGGGTGAGCCTGTGCTGGGTGCCAAGATGGAGACGGCAGCCACCTTGTTACGGCGGGACATCGTCTTCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 72 bp | CTTGGCACCCAGCACAGGCTCACCCACCAAACGTGCTaGTCCTCGAAGCGAGCGACACATCTCAGCCAGACG | + |
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Preference number: 6 (lower is better) Translates to: LGTQHRLTHQTC*SSKRATHLSQT Trigger: CGTCTGGCTGAGATGTGTCGCTCGCTTCGAGGAGCAGCACGTTTGGTGGGTGAGCCTGTGCTGGGTGCCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CCA 72 bp | CAGAAAGGGTACTGTGTTGGATTGCCCCATAGCGACTaGGAGGCTGGCCCTGGAGGCCGGCGAAGGGACAAG | + |
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Preference number: 6 (lower is better) Translates to: QKGYCVGLPHSD*EAGPGGRRRDK Trigger: CTTGTCCCTTCGCCGGCCTCCAGGGCCAGCCTCCCAGTCGCTATGGGGCAATCCAACACAGTACCCTTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000172966.2 |
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| CDS CAA 72 bp | TTGGTAGAGATGGCAGCCACATCTCCTGGCTGGAGCTaGGCCACGGTGTGCTCACAGGGCCCTTCAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LVEMAATSPGWS*ATVCSQGPSGR Trigger: CCTGCCTGAAGGGCCCTGTGAGCACACCGTGGCCAAGCTCCAGCCAGGAGATGTGGCTGCCATCTCTACCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000173415.2 |
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| CDS CAA 72 bp | CGCTTGGCCACAGCTTTGACTCGTTCTACCCCCTGTTaGAGGGTACTTGGGAGCTGGTCGCCAGGGTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: RLATALTRSTPC*RVLGSWSPGSP Trigger: CGGGGACCCTGGCGACCAGCTCCCAAGTACCCTCAAACAGGGGGTAGAACGAGTCAAAGCTGTGGCCAAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CAA 90 bp | TCCAGCTTCCGGGCCCGGAGCCCACCTTCTACCACTGCCACATCCTaGAGTTGCAGGTCGTTGATAGGGTCAAGGGTTGGGGGTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SSFRARSPPSTTATS*SCRSLIGSRVGGPA Trigger: AGCAGGACCCCCAACCCTTGACCCTATCAACGACCTGCAACTCAAGGATGTGGCAGTGGTAGAAGGTGGGCTCCGGGCCCGGAAGCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 72 bp | GGCGTGCTTGCTCATCCTCTCTTTCTTGGCCTCCACTaGAGCATAGTACCCCTGGGTGTGGAAGGCCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: GVLAHPLFLGLH*SIVPLGVEGPS Trigger: CGAGGGGCCTTCCACACCCAGGGGTACTATGCTGCAGTGGAGGCCAAGAAAGAGAGGATGAGCAAGCACGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 72 bp | GCGTGGGCTGCTTGGCCCCGAAAGTCTGGGCGTGCTTaGTCATCCTCTCTTTCTTGGCCTCCACTGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: AWAAWPRKSGRA*SSSLSWPPLQH Trigger: ATGCTGCAGTGGAGGCCAAGAAAGAGAGGATGAGCAAGCACGCCCAGACTTTCGGGGCCAAGCAGCCCACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 72 bp | TGGTGCGTGGGCTGCTTGGCCCCGAAAGTCTGGGCGTaGTTGCTCATCCTCTCTTTCTTGGCCTCCACTGCA | + |
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Preference number: 6 (lower is better) Translates to: WCVGCLAPKVWA*LLILSFLASTA Trigger: TGCAGTGGAGGCCAAGAAAGAGAGGATGAGCAAGCACGCCCAGACTTTCGGGGCCAAGCAGCCCACGCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 72 bp | TGTCGGTCAGAGCCTCGGAGCCGTGCAAGGCAGCGCTaGAGGAAGAGGTGGATCTCACTCTTCTCCGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: CRSEPRSRARQR*RKRWISLFSEL Trigger: AAGCTCGGAGAAGAGTGAGATCCACCTCTTCCTGCAGCGCTGCCTTGCACGGCTCCGAGGCTCTGACCGACA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 72 bp | CTCCAGCTTCCGGGCCCGGAGCCCACCTTCTACCACTaGCACATCCTTGAGTTGCAGGTCGTTGATAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LQLPGPEPTFYH*HILELQVVDRV Trigger: GACCCTATCAACGACCTGCAACTCAAGGATGTGGCAGTGGTAGAAGGTGGGCTCCGGGCCCGGAAGCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 72 bp | CATCTTGGCACCCAGCACAGGCTCACCCACCAAACGTaGTGCTCCTCGAAGCGAGCGACACATCTCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: HLGTQHRLTHQT*CSSKRATHLSQ Trigger: CTGGCTGAGATGTGTCGCTCGCTTCGAGGAGCAGCACGTTTGGTGGGTGAGCCTGTGCTGGGTGCCAAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CCA 72 bp | CCTCGGAGCCGTGCAAGGCAGCGCTGCAGGAAGAGGTaGATCTCACTCTTCTCCGAGCTTGTCGTGAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: PRSRARQRCRKR*ISLFSELVVRS Trigger: AGACCTCACGACAAGCTCGGAGAAGAGTGAGATCCACCTCTTCCTGCAGCGCTGCCTTGCACGGCTCCGAGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CCA 72 bp | TCCACAATCTCCTTAAGGATGGGCAGGATGCCGCTGTaGTGCACACCTAGGCCTCGGCGAAGGAGCTCCGAC | + |
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Preference number: 6 (lower is better) Translates to: STISLRMGRMPL*CTPRPRRRSSD Trigger: GTCGGAGCTCCTTCGCCGAGGCCTAGGTGTGCACCACAGCGGCATCCTGCCCATCCTTAAGGAGATTGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CAA 72 bp | GCTCATCCATCCCACCTGGCCAGAAAGGGTACTGTGTaGGATTGCCCCATAGCGACTGGGAGGCTGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: AHPSHLARKGTV*DCPIATGRLAL Trigger: CAGGGCCAGCCTCCCAGTCGCTATGGGGCAATCCAACACAGTACCCTTTCTGGCCAGGTGGGATGGATGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000172966.2 |
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| CDS CAA 72 bp | TGCGTGGGCTGCTTGGCCCCGAAAGTCTGGGCGTGCTaGCTCATCCTCTCTTTCTTGGCCTCCACTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: CVGCLAPKVWAC*LILSFLASTAA Trigger: TGCTGCAGTGGAGGCCAAGAAAGAGAGGATGAGCAAGCACGCCCAGACTTTCGGGGCCAAGCAGCCCACGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CAA 72 bp | CCAGGCAGCAGGTCCCGGAAGGTAGAGCCATCATGTTaGCGCATGGAGTCAAACACCACCGTCCTGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: PGSRSRKVEPSC*RMESNTTVLAG Trigger: GCCAGCCAGGACGGTGGTGTTTGACTCCATGCGCAAACATGATGGCTCTACCTTCCGGGACCTGCTGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CAA 72 bp | CGGGCCCGGAGCCCACCTTCTACCACTGCCACATCCTaGAGTTGCAGGTCGTTGATAGGGTCAAGGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: RARSPPSTTATS*SCRSLIGSRVG Trigger: CCCAACCCTTGACCCTATCAACGACCTGCAACTCAAGGATGTGGCAGTGGTAGAAGGTGGGCTCCGGGCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CAA 72 bp | ATGTCCCGCCGTAACAAGGTGGCTGCCGTCTCCATCTaGGCACCCAGCACAGGCTCACCCACCAAACGTGCT | + |
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Preference number: 6 (lower is better) Translates to: MSRRNKVAAVSI*APSTGSPTKRA Trigger: AGCACGTTTGGTGGGTGAGCCTGTGCTGGGTGCCAAGATGGAGACGGCAGCCACCTTGTTACGGCGGGACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CAA 90 bp | CTTCCGGGCCCGGAGCCCACCTTCTACCACTGCCACATCCTTGAGTaGCAGGTCGTTGATAGGGTCAAGGGTTGGGGGTCCTGCTGGATA | + |
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Preference number: 6 (lower is better) Translates to: LPGPEPTFYHCHILE*QVVDRVKGWGSCWI Trigger: TATCCAGCAGGACCCCCAACCCTTGACCCTATCAACGACCTGCAACTCAAGGATGTGGCAGTGGTAGAAGGTGGGCTCCGGGCCCGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 72 bp | GTGGTCATGATGAGGCAGGAGGCCTCTGGGTGCAGCTaGACATCCCCTGTGAGCAGCCCTACATCCCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: VVMMRQEASGCS*TSPVSSPTSPN Trigger: ATTTGGGGATGTAGGGCTGCTCACAGGGGATGTGCAGCTGCACCCAGAGGCCTCCTGCCTCATCATGACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 72 bp | CTTGTCGTGAGGTCTAGAGAGGTGAGGCCCGAAGCCTaGTCATCACAGCGGCCTCGGGAGAAGGTGAACACT | + |
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Preference number: 6 (lower is better) Translates to: LVVRSREVRPEA*SSQRPREKVNT Trigger: AGTGTTCACCTTCTCCCGAGGCCGCTGTGATGAGCAGGCTTCGGGCCTCACCTCTCTAGACCTCACGACAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 72 bp | ACAATCTCCTTAAGGATGGGCAGGATGCCGCTGTGGTaGACACCTAGGCCTCGGCGAAGGAGCTCCGACATG | + |
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Preference number: 6 (lower is better) Translates to: TISLRMGRMPLW*TPRPRRRSSDM Trigger: CATGTCGGAGCTCCTTCGCCGAGGCCTAGGTGTGCACCACAGCGGCATCCTGCCCATCCTTAAGGAGATTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 72 bp | CGGAGCCCACCTTCTACCACTGCCACATCCTTGAGTTaGAGGTCGTTGATAGGGTCAAGGGTTGGGGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: RSPPSTTATSLS*RSLIGSRVGGP Trigger: AGGACCCCCAACCCTTGACCCTATCAACGACCTGCAACTCAAGGATGTGGCAGTGGTAGAAGGTGGGCTCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 72 bp | ACGGCAGCCAGGAGTGACCAGGGATCCGTCTTCCTCTaGCATTTTCGAGCTGAGTGCTCTACACCGTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: TAARSDQGSVFL*HFRAECSTPCR Trigger: TCTACACGGTGTAGAGCACTCAGCTCGAAAATGGCAGAGGAAGACGGATCCCTGGTCACTCCTGGCTGCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 72 bp | CCTCCTCAGCTTCCTCCCGAGTATGCAGATCAGTTATaGTGGGCTCATCCATCCCACCTGGCCAGAAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: PPQLPPEYADQL*WAHPSHLARKG Trigger: ACCCTTTCTGGCCAGGTGGGATGGATGAGCCCAGCATAACTGATCTGCATACTCGGGAGGAAGCTGAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CCA 72 bp | CGAAAGTCTGGGCGTGCTTGCTCATCCTCTCTTTCTTaGCCTCCACTGCAGCATAGTACCCCTGGGTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: RKSGRACSSSLS*PPLQHSTPGCG Trigger: TCCACACCCAGGGGTACTATGCTGCAGTGGAGGCCAAGAAAGAGAGGATGAGCAAGCACGCCCAGACTTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS CCA 72 bp | ATCCTTGAGTTGCAGGTCGTTGATAGGGTCAAGGGTTaGGGGTCCTGCTGGATAGGACTGAGCCAGACGCAG | + |
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Preference number: 6 (lower is better) Translates to: ILELQVVDRVKG*GSCWIGLSQTQ Trigger: CTGCGTCTGGCTCAGTCCTATCCAGCAGGACCCCCAACCCTTGACCCTATCAACGACCTGCAACTCAAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000173415.2 |
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| CDS CAA 72 bp | ATGTCCTCCACTCTGAGGGCATCCACCCGCAGCAGGTaGAGGATCATGGTATATGTGAGGCGGAACTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: MSSTLRASTRSR*RIMVYVRRNWD Trigger: GTCCCAGTTCCGCCTCACATATACCATGATCCTCAACCTGCTGCGGGTGGATGCCCTCAGAGTGGAGGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000173415.2 |
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| CDS CAA 72 bp | TCCTCAGAGATCTTCTCCCCATTCACCCGGAGCACTTaGGTAGAGATGGCAGCCACATCTCCTGGCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SSEIFSPFTRST*VEMAATSPGWS Trigger: GCTCCAGCCAGGAGATGTGGCTGCCATCTCTACCAAAGTGCTCCGGGTGAATGGGGAGAAGATCTCTGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000173415.2 |
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| CDS CAA 90 bp | TTGCTAAAGTCCTCAGAGATCTTCTCCCCATTCACCCGGAGCACTTaGGTAGAGATGGCAGCCACATCTCCTGGCTGGAGCTTGGCCACG | + |
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Preference number: 6 (lower is better) Translates to: LLKSSEIFSPFTRST*VEMAATSPGWSLAT Trigger: CGTGGCCAAGCTCCAGCCAGGAGATGTGGCTGCCATCTCTACCAAAGTGCTCCGGGTGAATGGGGAGAAGATCTCTGAGGACTTTAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000173415.2 |
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| CDS TCA 72 bp | CCCTGGAGGCCGGCGAAGGGACAAGGAGGTTGTAGCTaGCAGATTTGTGTTCTCCAGCAGGACCTCCTTATA | + |
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Preference number: 6 (lower is better) Translates to: PWRPAKGQGGCS*QICVLQQDLLI Trigger: TATAAGGAGGTCCTGCTGGAGAACACAAATCTGTCAGCTACAACCTCCTTGTCCCTTCGCCGGCCTCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000172966.2 |
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| CDS GCA 72 bp | ACTGGGACTGAAGTTGGGATGGTTTCCCCATCATCATaGGGTGTAGATCTGCCATCTCAGGCACTCGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: TGTEVGMVSPSS*GVDLPSQALGP Trigger: AGGGCCGAGTGCCTGAGATGGCAGATCTACACCGCATGATGATGGGGAAACCATCCCAACTTCAGTCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000173415.2 |
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| CDS CCA 72 bp | TATAAGGTCATCTGGGTGGGGCACATCTGGAGTGGCTaGCCCCTTGTCCCTTGGGTTATCAGACACAACAGG | + |
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Preference number: 6 (lower is better) Translates to: YKVIWVGHIWSG*PLVPWVIRHNR Trigger: CCTGTTGTGTCTGATAACCCAAGGGACAAGGGGCCAGCCACTCCAGATGTGCCCCACCCAGATGACCTTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000173415.2 |
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| CDS CAA 72 bp | TCATCTGGGTGGGGCACATCTGGAGTGGCTGGCCCCTaGTCCCTTGGGTTATCAGACACAACAGGCTTATCA | + |
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Preference number: 6 (lower is better) Translates to: SSGWGTSGVAGP*SLGLSDTTGLS Trigger: TGATAAGCCTGTTGTGTCTGATAACCCAAGGGACAAGGGGCCAGCCACTCCAGATGTGCCCCACCCAGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046022.16 ENSMUST00000173415.2 |
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| CDS GCA 72 bp | CAGAGCTGCGATTTCCTCTGGTCGCAGAGCGCTCAGTaGATTGTCAAACATGAGTTCAGTGAGGAGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: QSCDFLWSQSAQ*IVKHEFSEEQL Trigger: GAGCTGCTCCTCACTGAACTCATGTTTGACAATGCACTGAGCGCTCTGCGACCAGAGGAAATCGCAGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS GCA 72 bp | TCAAAGTCTATCTCCTCCTCAGCTTCCTCCCGAGTATaGAGATCAGTTATGCTGGGCTCATCCATCCCACCT | + |
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Preference number: 6 (lower is better) Translates to: SKSISSSASSRV*RSVMLGSSIPP Trigger: AGGTGGGATGGATGAGCCCAGCATAACTGATCTGCATACTCGGGAGGAAGCTGAGGAGGAGATAGACTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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| CDS TCA 72 bp | CAAGACCAATGTTGTAAATACCCTGCTGGTGGAGTTTaGGGAGACCTGCAGGATCACACCCAGTGCATTGTG | + |
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Preference number: 6 (lower is better) Translates to: QDQCCKYPAGGV*GDLQDHTQCIV Trigger: CACAATGCACTGGGTGTGATCCTGCAGGTCTCCTCAAACTCCACCAGCAGGGTATTTACAACATTGGTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046022.16 |
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