Pregenerated sensors for SKINT5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078598Ensembl transcript IDs: ENSMUST00000169631.8, ENSMUST00000170105.8, ENSMUST00000171627.9
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTTGCTATCTCTCCATTCCATGTGAGGCTGTGGGAACCAACCGCCTaGATGACACTCCAACCTCACACCTTTGATATTTGGGGGATGCAT | + |
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Preference number: 5 (lower is better) Translates to: FAISPFHVRLWEPTA*MTLQPHTFDIWGMH Trigger: ATGCATCCCCCAAATATCAAAGGTGTGAGGTTGGAGTGTCATTCAGGCGGTTGGTTCCCACAGCCTCACATGGAATGGAGAGATAGCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS TCA 90 bp | AACCAGCGAATTTCCATGTGTTTTGCTTGCTGTGGTGGAGACAACTaGCAACTGAGTTCTAGGTTTCCATCCAATGGAACCAAGACTGGA | + |
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Preference number: 5 (lower is better) Translates to: NQRISMCFACCGGDN*QLSSRFPSNGTKTG Trigger: TCCAGTCTTGGTTCCATTGGATGGAAACCTAGAACTCAGTTGTCAGTTGTCTCCACCACAGCAAGCAAAACACATGGAAATTCGCTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS TCA 90 bp | GAATTTCCATGTGTTTTGCTTGCTGTGGTGGAGACAACTGACAACTaGGTTCTAGGTTTCCATCCAATGGAACCAAGACTGGACTCTCTA | + |
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Preference number: 5 (lower is better) Translates to: EFPCVLLAVVETTDN*VLGFHPMEPRLDSL Trigger: TAGAGAGTCCAGTCTTGGTTCCATTGGATGGAAACCTAGAACTCAGTTGTCAGTTGTCTCCACCACAGCAAGCAAAACACATGGAAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS TCA 90 bp | CTTTACCATTTCTATACAGGTATACTGGCTCTGAATAGCGATTCTTaGACCAGCGAATTTCCATGTGTTTTGCTTGCTGTGGTGGAGACA | + |
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Preference number: 5 (lower is better) Translates to: LYHFYTGILALNSDS*TSEFPCVLLAVVET Trigger: TGTCTCCACCACAGCAAGCAAAACACATGGAAATTCGCTGGTTCAAGAATCGCTATTCAGAGCCAGTATACCTGTATAGAAATGGTAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS GCA 90 bp | AAGCAGGACACCATGAATCCCACACACCTGGTAGGACAATACTTATaGTTTCTTCTTGGTGAGTTACAAAGTTTTGAATATAGCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: KQDTMNPTHLVGQYL*FLLGELQSFEYSRL Trigger: CAACCTGCTATATTCAAAACTTTGTAACTCACCAAGAAGAAAGCATAAGTATTGTCCTACCAGGTGTGTGGGATTCATGGTGTCCTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS CCA 90 bp | CCTGAATCATGTTCAACAGCAAACATTTCAACCCTTGCTGCACACTaGAACTTTCAAGAATCAACTGAACTCTGTCGAACAGCAAATCTT | + |
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Preference number: 5 (lower is better) Translates to: PESCSTANISTLAAH*NFQESTELCRTANL Trigger: AAGATTTGCTGTTCGACAGAGTTCAGTTGATTCTTGAAAGTTCCAGTGTGCAGCAAGGGTTGAAATGTTTGCTGTTGAACATGATTCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS TCA 90 bp | TTCTCCAAAAAGGTCTTTACCATTTCTATACAGGTATACTGGCTCTaGATAGCGATTCTTGAACCAGCGAATTTCCATGTGTTTTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: FSKKVFTISIQVYWL*IAILEPANFHVFCL Trigger: CAAGCAAAACACATGGAAATTCGCTGGTTCAAGAATCGCTATTCAGAGCCAGTATACCTGTATAGAAATGGTAAAGACCTTTTTGGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS TCA 90 bp | TCTCTTGCTGCACACTGGAACTTTCAAGAATCAACGGAATTCTGTTaGATAGCAAATCTTTCATCTCTTTTTGCACACTTGTCCTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: SLAAHWNFQESTEFC*IANLSSLFAHLSFE Trigger: TTCAAAGGACAAGTGTGCAAAAAGAGATGAAAGATTTGCTATTCAACAGAATTCCGTTGATTCTTGAAAGTTCCAGTGTGCAGCAAGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS TCA 90 bp | GTTGTTAAACATGATCAGCACACACAGGATCACACTAGTATCTTTTaGCCACAAAGTATTCAGTTCAAAATGTTGGTCTGCTTCTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: VVKHDQHTQDHTSIF*PQSIQFKMLVCFSL Trigger: CAAAGAGAAGCAGACCAACATTTTGAACTGAATACTTTGTGGTCAAAAGATACTAGTGTGATCCTGTGTGTGCTGATCATGTTTAACAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS GCA 90 bp | ACTGAATTCTGTCCAACAGCGTATCTATCGTATCTTTTTGCACACTaGTTCTTTGAAGAATCGACTGAATTATGTCCAACAGCTTATCTT | + |
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Preference number: 5 (lower is better) Translates to: TEFCPTAYLSYLFAH*FFEESTELCPTAYL Trigger: AAGATAAGCTGTTGGACATAATTCAGTCGATTCTTCAAAGAAGCAGTGTGCAAAAAGATACGATAGATACGCTGTTGGACAGAATTCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS GCA 90 bp | TATGCTTTCTTCTTGGTGAGTTACAAAGTTTTGAATATAGCAGGTTaGACTCCAGTGAGAGTTGGATTTAATAAAAAGGTCCATTGTCAT | + |
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Preference number: 5 (lower is better) Translates to: YAFFLVSYKVLNIAG*TPVRVGFNKKVHCH Trigger: ATGACAATGGACCTTTTTATTAAATCCAACTCTCACTGGAGTGCAACCTGCTATATTCAAAACTTTGTAACTCACCAAGAAGAAAGCATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS TCA 72 bp | TCTCCATTCCATGTGAGGCTGTGGGAACCAACCGCCTaGATGACACTCCAACCTCACACCTTTGATATTTGG | + |
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Preference number: 6 (lower is better) Translates to: SPFHVRLWEPTA*MTLQPHTFDIW Trigger: CCAAATATCAAAGGTGTGAGGTTGGAGTGTCATTCAGGCGGTTGGTTCCCACAGCCTCACATGGAATGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS GCA 72 bp | TGCTACCATCTGGAGGAGAAACAAAACAACGCAGTGTaGGGTAAGAGGTATTCCTACAGCTCCCATCACACC | + |
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Preference number: 6 (lower is better) Translates to: CYHLEEKQNNAV*GKRYSYSSHHT Trigger: GGTGTGATGGGAGCTGTAGGAATACCTCTTACCGCACACTGCGTTGTTTTGTTTCTCCTCCAGATGGTAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS TCA 72 bp | ATGGAACCAAGACTGGACTCTCTAAGCCATTCACAGTaGATTGTTCTGAACTCAGTGCTACCATCTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: MEPRLDSLSHSQ*IVLNSVLPSGG Trigger: TCCTCCAGATGGTAGCACTGAGTTCAGAACAATTCACTGTGAATGGCTTAGAGAGTCCAGTCTTGGTTCCAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS TCA 72 bp | TGTGTTTTGCTTGCTGTGGTGGAGACAACTGACAACTaGGTTCTAGGTTTCCATCCAATGGAACCAAGACTG | + |
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Preference number: 6 (lower is better) Translates to: CVLLAVVETTDN*VLGFHPMEPRL Trigger: CAGTCTTGGTTCCATTGGATGGAAACCTAGAACTCAGTTGTCAGTTGTCTCCACCACAGCAAGCAAAACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS TCA 72 bp | ATTTCCATGTGTTTTGCTTGCTGTGGTGGAGACAACTaGCAACTGAGTTCTAGGTTTCCATCCAATGGAACC | + |
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Preference number: 6 (lower is better) Translates to: ISMCFACCGGDN*QLSSRFPSNGT Trigger: GGTTCCATTGGATGGAAACCTAGAACTCAGTTGTCAGTTGTCTCCACCACAGCAAGCAAAACACATGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS CCA 72 bp | TTCACAGTGAATTGTTCTGAACTCAGTGCTACCATCTaGAGGAGAAACAAAACAACGCAGTGTGCGGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: FTVNCSELSATI*RRNKTTQCAVR Trigger: TCTTACCGCACACTGCGTTGTTTTGTTTCTCCTCCAGATGGTAGCACTGAGTTCAGAACAATTCACTGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS TCA 72 bp | TTCTATACAGGTATACTGGCTCTGAATAGCGATTCTTaGACCAGCGAATTTCCATGTGTTTTGCTTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: FYTGILALNSDS*TSEFPCVLLAV Trigger: CACAGCAAGCAAAACACATGGAAATTCGCTGGTTCAAGAATCGCTATTCAGAGCCAGTATACCTGTATAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS CAA 72 bp | CACCTGAATCATGTTCAACAGCAAACATTTCAACCCTaGCTGCACACTGGAACTTTCAAGAATCAACTGAAC | + |
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Preference number: 6 (lower is better) Translates to: HLNHVQQQTFQP*LHTGTFKNQLN Trigger: GTTCAGTTGATTCTTGAAAGTTCCAGTGTGCAGCAAGGGTTGAAATGTTTGCTGTTGAACATGATTCAGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CAA 72 bp | CCATACAGTCTGAAGTATATCAATGCCTTGAGCCTGTaGTTAAACATGATCAGCACACACAGGATCACACTA | + |
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Preference number: 6 (lower is better) Translates to: PYSLKYINALSL*LNMISTHRITL Trigger: TAGTGTGATCCTGTGTGTGCTGATCATGTTTAACAACAGGCTCAAGGCATTGATATACTTCAGACTGTATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CAA 72 bp | GGTGAAAATCCATACAGTCTGAAGTATATCAATGCCTaGAGCCTGTTGTTAAACATGATCAGCACACACAGG | + |
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Preference number: 6 (lower is better) Translates to: GENPYSLKYINA*SLLLNMISTHR Trigger: CCTGTGTGTGCTGATCATGTTTAACAACAGGCTCAAGGCATTGATATACTTCAGACTGTATGGATTTTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CAA 90 bp | TCTGTCCAGCAGGAAGTCTTTCATCTCTTTTTGCACACTGGTTCTTaGAAGAATCAACTGAATTCTGTCCAACAGCGTATCTATCGTATC | + |
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Preference number: 6 (lower is better) Translates to: SVQQEVFHLFLHTGS*KNQLNSVQQRIYRI Trigger: GATACGATAGATACGCTGTTGGACAGAATTCAGTTGATTCTTCAAAGAACCAGTGTGCAAAAAGAGATGAAAGACTTCCTGCTGGACAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS TCA 72 bp | AAGGTCTTTACCATTTCTATACAGGTATACTGGCTCTaGATAGCGATTCTTGAACCAGCGAATTTCCATGTG | + |
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Preference number: 6 (lower is better) Translates to: KVFTISIQVYWL*IAILEPANFHV Trigger: CACATGGAAATTCGCTGGTTCAAGAATCGCTATTCAGAGCCAGTATACCTGTATAGAAATGGTAAAGACCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS TCA 72 bp | TTTGATATTTGGGGGATGCATAAGAATCTGTATGTCTaGGCTTGTAGCTGTGACCTTGACGTCTATGATATG | + |
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Preference number: 6 (lower is better) Translates to: FDIWGMHKNLYV*ACSCDLDVYDM Trigger: CATATCATAGACGTCAAGGTCACAGCTACAAGCTCAGACATACAGATTCTTATGCATCCCCCAAATATCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS TCA 72 bp | CATGATCAGCACACACAGGATCACACTAGTATCTTTTaGCCACAAAGTATTCAGTTCAAAATGTTGGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: HDQHTQDHTSIF*PQSIQFKMLVC Trigger: GCAGACCAACATTTTGAACTGAATACTTTGTGGTCAAAAGATACTAGTGTGATCCTGTGTGTGCTGATCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS GCA 72 bp | CTTGATCCACAATGGAACTTAGAATACTTGATTGAATaGTTTCCAACAGCCACTCTTTTGTTCCTCGATCCA | + |
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Preference number: 6 (lower is better) Translates to: LDPQWNLEYLIE*FPTATLLFLDP Trigger: TGGATCGAGGAACAAAAGAGTGGCTGTTGGAAAGCATTCAATCAAGTATTCTAAGTTCCATTGTGGATCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS CAA 72 bp | GAATACTTGATTGAATGCTTTCCAACAGCCACTCTTTaGTTCCTCGATCCACAATGGCACTTTGAATACTTG | + |
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Preference number: 6 (lower is better) Translates to: EYLIECFPTATL*FLDPQWHFEYL Trigger: CAAGTATTCAAAGTGCCATTGTGGATCGAGGAACAAAAGAGTGGCTGTTGGAAAGCATTCAATCAAGTATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS CAA 72 bp | GAAGGATCAGCTGAATTCTTTCCAACAGCAAATCTTTaGTCTCTTGATGCACACCGGGATTTTGAAGAATCA | + |
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Preference number: 6 (lower is better) Translates to: EGSAEFFPTANL*SLDAHRDFEES Trigger: TGATTCTTCAAAATCCCGGTGTGCATCAAGAGACAAAAGATTTGCTGTTGGAAAGAATTCAGCTGATCCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CAA 72 bp | GAAGGAGTGACTGAATTCTTTCCAACAGCAAATCTTTaGTCTCTTTTTGCACACACGAACTTTGAAGGATCG | + |
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Preference number: 6 (lower is better) Translates to: EGVTEFFPTANL*SLFAHTNFEGS Trigger: CGATCCTTCAAAGTTCGTGTGTGCAAAAAGAGACAAAAGATTTGCTGTTGGAAAGAATTCAGTCACTCCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CAA 90 bp | TTGAAAAATCACCTGAATCATGTTCAACAGCAAACATTTCAACCCTaGCTGCACACTGGAACTTTCAAGAATCAACTGAACTCTGTCGAA | + |
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Preference number: 6 (lower is better) Translates to: LKNHLNHVQQQTFQP*LHTGTFKNQLNSVE Trigger: TTCGACAGAGTTCAGTTGATTCTTGAAAGTTCCAGTGTGCAGCAAGGGTTGAAATGTTTGCTGTTGAACATGATTCAGGTGATTTTTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CAA 90 bp | TCTGTCCAACAGCGTATCTATCGTATCTTTTTGCACACTGCTTCTTaGAAGAATCGACTGAATTATGTCCAACAGCTTATCTTTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SVQQRIYRIFLHTAS*KNRLNYVQQLIFCL Trigger: GAGACAAAAGATAAGCTGTTGGACATAATTCAGTCGATTCTTCAAAGAAGCAGTGTGCAAAAAGATACGATAGATACGCTGTTGGACAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS TCA 72 bp | TTTCGTCTCTTGATGCACACTGAAACTTTCAAGAATTaGCTTAATTCTGTCCAGCAGGAAGTCTTTCATCTC | + |
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Preference number: 6 (lower is better) Translates to: FRLLMHTETFKN*LNSVQQEVFHL Trigger: GAGATGAAAGACTTCCTGCTGGACAGAATTAAGTCAATTCTTGAAAGTTTCAGTGTGCATCAAGAGACGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS GCA 72 bp | TGTCCAACAGCGTATCTATCGTATCTTTTTGCACACTaGTTCTTTGAAGAATCGACTGAATTATGTCCAACA | + |
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Preference number: 6 (lower is better) Translates to: CPTAYLSYLFAH*FFEESTELCPT Trigger: TGTTGGACATAATTCAGTCGATTCTTCAAAGAAGCAGTGTGCAAAAAGATACGATAGATACGCTGTTGGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CCA 72 bp | TTTCCAACAGCCACTCTTTTGTTCCTCGATCCACAATaGCACTTTGAATACTTGATTGAATGCTTTTCAACA | + |
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Preference number: 6 (lower is better) Translates to: FPTATLLFLDPQ*HFEYLIECFST Trigger: TGTTGAAAAGCATTCAATCAAGTATTCAAAGTGCCATTGTGGATCGAGGAACAAAAGAGTGGCTGTTGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS CCA 72 bp | TGTCGAACAGCAAATCTTTCGTCTCTTGATGCACACTaGAACTGTGAAGAATCGACTCAATTATATACAACA | + |
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Preference number: 6 (lower is better) Translates to: CRTANLSSLDAH*NCEESTQLYTT Trigger: TGTTGTATATAATTGAGTCGATTCTTCACAGTTCCAGTGTGCATCAAGAGACGAAAGATTTGCTGTTCGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CCA 72 bp | TGTCCAACAGCTTATCTTTTGTCTCTTCTTGTACACTaGTCCTTTGAAGAATCGACTGAATTATGTCCAACA | + |
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Preference number: 6 (lower is better) Translates to: CPTAYLLSLLVH*SFEESTELCPT Trigger: TGTTGGACATAATTCAGTCGATTCTTCAAAGGACCAGTGTACAAGAAGAGACAAAAGATAAGCTGTTGGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CAA 72 bp | CTTTTGTCCCTTGATCCACAATGGAACTTAGAATACTaGATTGAATGCTTTCCAACAGCCACTCTTTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: LLSLDPQWNLEY*IECFPTATLLF Trigger: GAACAAAAGAGTGGCTGTTGGAAAGCATTCAATCAAGTATTCTAAGTTCCATTGTGGATCAAGGGACAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS CAA 72 bp | GAAGAATCGACTGAATTATGTCCAACAGCTTATCTTTaGTCTCTTGCTGCACACTGGAACTTTCAAGAATCA | + |
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Preference number: 6 (lower is better) Translates to: EESTELCPTAYL*SLAAHWNFQES Trigger: TGATTCTTGAAAGTTCCAGTGTGCAGCAAGAGACAAAAGATAAGCTGTTGGACATAATTCAGTCGATTCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CAA 72 bp | CAGCTTATCTTTTGTCTCTTCTTGTACACTGGTCCTTaGAAGAATCGACTGAATTATGTCCAACAGCTTATC | + |
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Preference number: 6 (lower is better) Translates to: QLIFCLFLYTGP*KNRLNYVQQLI Trigger: GATAAGCTGTTGGACATAATTCAGTCGATTCTTCAAAGGACCAGTGTACAAGAAGAGACAAAAGATAAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CAA 90 bp | TATGTCCAACAGCTTATCTTTTGTCTCTTCTTGTACACTGGTCCTTaGAAGAATCGACTGAATTATGTCCAACAGCTTATCTTTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: YVQQLIFCLFLYTGP*KNRLNYVQQLIFCL Trigger: GAGACAAAAGATAAGCTGTTGGACATAATTCAGTCGATTCTTCAAAGGACCAGTGTACAAGAAGAGACAAAAGATAAGCTGTTGGACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CAA 90 bp | AAGAATCAACTGAATTCTGTCCAACAGCGTATCTATCGTATCTTTTaGCACACTGCTTCTTTGAAGAATCGACTGAATTATGTCCAACAG | + |
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Preference number: 6 (lower is better) Translates to: KNQLNSVQQRIYRIF*HTASLKNRLNYVQQ Trigger: CTGTTGGACATAATTCAGTCGATTCTTCAAAGAAGCAGTGTGCAAAAAGATACGATAGATACGCTGTTGGACAGAATTCAGTTGATTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS GCA 72 bp | ACCATGAATCCCACACACCTGGTAGGACAATACTTATaGTTTCTTCTTGGTGAGTTACAAAGTTTTGAATAT | + |
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Preference number: 6 (lower is better) Translates to: TMNPTHLVGQYL*FLLGELQSFEY Trigger: ATATTCAAAACTTTGTAACTCACCAAGAAGAAAGCATAAGTATTGTCCTACCAGGTGTGTGGGATTCATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS CAA 72 bp | CTTAATTCTGTCCAGCAGGAAGTCTTTCATCTCTTTTaGCACACTGGTTCTTTGAAGAATCAACTGAATTCT | + |
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Preference number: 6 (lower is better) Translates to: LNSVQQEVFHLF*HTGSLKNQLNS Trigger: AGAATTCAGTTGATTCTTCAAAGAACCAGTGTGCAAAAAGAGATGAAAGACTTCCTGCTGGACAGAATTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CAA 90 bp | TGCTTCTTTGAAGAATCGACTGAATTATGTCCAACAGCTTATCTTTaGTCTCTTCTTGTACACTGGTCCTTTGAAGAATCGACTGAATTA | + |
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Preference number: 6 (lower is better) Translates to: CFFEESTELCPTAYL*SLLVHWSFEESTEL Trigger: TAATTCAGTCGATTCTTCAAAGGACCAGTGTACAAGAAGAGACAAAAGATAAGCTGTTGGACATAATTCAGTCGATTCTTCAAAGAAGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CCA 72 bp | TTTTCAACAGCAACACTTTTGTCCCTTGATCCACAATaGAACTTAGAATACTTGATTGAATGCTTTCCAACA | + |
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Preference number: 6 (lower is better) Translates to: FSTATLLSLDPQ*NLEYLIECFPT Trigger: TGTTGGAAAGCATTCAATCAAGTATTCTAAGTTCCATTGTGGATCAAGGGACAAAAGTGTTGCTGTTGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS CAA 72 bp | CCTTTGTTTCTATATCCAGAGTGGAACTTTGAATGCTaGATTGAATACTTTTCAACAGCAACACTTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: PLFLYPEWNFEC*IEYFSTATLLS Trigger: GGACAAAAGTGTTGCTGTTGAAAAGTATTCAATCAAGCATTCAAAGTTCCACTCTGGATATAGAAACAAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS CAA 72 bp | GAATACTTGATTGAATGCTTTTCAACAGCAACTCCTTaGTTTCTATATCCAGAGTGGAACTTTGAATGCTTG | + |
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Preference number: 6 (lower is better) Translates to: EYLIECFSTATP*FLYPEWNFECL Trigger: CAAGCATTCAAAGTTCCACTCTGGATATAGAAACAAAGGAGTTGCTGTTGAAAAGCATTCAATCAAGTATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS CAA 72 bp | GAATACTCGATTGAATTATTTTCAACAGCAACTCTTTaGTTCCTAGATCCACACTGGAACTTTGAATACTCG | + |
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Preference number: 6 (lower is better) Translates to: EYSIELFSTATL*FLDPHWNFEYS Trigger: CGAGTATTCAAAGTTCCAGTGTGGATCTAGGAACAAAAGAGTTGCTGTTGAAAATAATTCAATCGAGTATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS CAA 72 bp | GAATACTCGATTGAATTATTTTCAACAGCAACTCTTTaGTTCCTAGATCCACAGTGGAACTTTGAATACTCG | + |
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Preference number: 6 (lower is better) Translates to: EYSIELFSTATL*FLDPQWNFEYS Trigger: CGAGTATTCAAAGTTCCACTGTGGATCTAGGAACAAAAGAGTTGCTGTTGAAAATAATTCAATCGAGTATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 ENSMUST00000171627.9 |
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| CDS CAA 72 bp | GAACAGTTGATTGAGTTATTTCAGACAGCATCTTTTTaGTCTCTGAATTCACACTGGAACTATGACGAATTG | + |
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Preference number: 6 (lower is better) Translates to: EQLIELFQTASF*SLNSHWNYDEL Trigger: CAATTCGTCATAGTTCCAGTGTGAATTCAGAGACAAAAAAGATGCTGTCTGAAATAACTCAATCAACTGTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CAA 72 bp | CTGCTGAATTTTATCCAAGAGCAACATTTCTTTTCCTaGATTCACACTGGAAATTTGAAGAATCCATTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LLNFIQEQHFFS*IHTGNLKNPLG Trigger: ACCCAATGGATTCTTCAAATTTCCAGTGTGAATCAAGGAAAAGAAATGTTGCTCTTGGATAAAATTCAGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CAA 72 bp | GAAGGATCGACCGAATTCTTTCCAACAGCAAATATTTaGTCTCTTTTTGCACACTTGAATTTTGAAGGATCA | + |
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Preference number: 6 (lower is better) Translates to: EGSTEFFPTANI*SLFAHLNFEGS Trigger: TGATCCTTCAAAATTCAAGTGTGCAAAAAGAGACAAAATATTTGCTGTTGGAAAGAATTCGGTCGATCCTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CAA 72 bp | TGCACACTGGAACTTTCAAGAATCAACGGAATTCTGTaGAATAGCAAATCTTTCATCTCTTTTTGCACACTT | + |
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Preference number: 6 (lower is better) Translates to: CTLELSRINGIL*NSKSFISFCTL Trigger: AAGTGTGCAAAAAGAGATGAAAGATTTGCTATTCAACAGAATTCCGTTGATTCTTGAAAGTTCCAGTGTGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS CAA 72 bp | CTGAATTATGTCCAACAGCTTATCTTTTGTCTCTTCTaGTACACTGGTCCTTTGAAGAATCGACTGAATTAT | + |
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Preference number: 6 (lower is better) Translates to: LNYVQQLIFCLF*YTGPLKNRLNY Trigger: ATAATTCAGTCGATTCTTCAAAGGACCAGTGTACAAGAAGAGACAAAAGATAAGCTGTTGGACATAATTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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| CDS TCA 72 bp | ATGCATAATGAGAGTGACTACTATAATTGTGAACACTaGAATTCCGAGGTCCAATGCATACTTTTTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: MHNESDYYNCEH*NSEVQCILFPK Trigger: TTTTGGAAAAAGTATGCATTGGACCTCGGAATTTCAGTGTTCACAATTATAGTAGTCACTCTCATTATGCAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169631.8 ENSMUST00000170105.8 |
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