Pregenerated sensors for SKINT4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055960Ensembl transcript IDs: ENSMUST00000069769.9, ENSMUST00000106564.8, ENSMUST00000106565.8, ENSMUST00000106566.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | AGCGCATGCTCAGTCCAAACATCAGCCTCTGTATTTGTCATGTTCTaGCAGAGCCTCTCAGGAGACAGCTATATCAGGTTCCTGTCAGCT | + |
Preference number: 1 (lower is better) Translates to: SACSVQTSASVFVMF*QSLSGDSYIRFLSA Trigger: AGCTGACAGGAACCTGATATAGCTGTCTCCTGAGAGGCTCTGCCAGAACATGACAAATACAGAGGCTGATGTTTGGACTGAGCATGCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR TCA 90 bp | ACTAAGGCATTGAGCCTTCAAAGGACAAAGGATTTCTCCTACCATTaGTGCTGGACAAAGCTCTGCTACATATGCAGCTCAAGGCATGGG | + |
Preference number: 1 (lower is better) Translates to: TKALSLQRTKDFSYH*CWTKLCYICSSRHG Trigger: CCCATGCCTTGAGCTGCATATGTAGCAGAGCTTTGTCCAGCATCAATGGTAGGAGAAATCCTTTGTCCTTTGAAGGCTCAATGCCTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR TCA 90 bp | CCCATGCTCTTCTCTCCACCCTTGAATTTCCCTACACTAAGGCATTaGGCCTTCAAAGGACAAAGGATTTCTCCTACCATTGATGCTGGA | + |
Preference number: 1 (lower is better) Translates to: PMLFSPPLNFPTLRH*AFKGQRISPTIDAG Trigger: TCCAGCATCAATGGTAGGAGAAATCCTTTGTCCTTTGAAGGCTCAATGCCTTAGTGTAGGGAAATTCAAGGGTGGAGAGAAGAGCATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR CCA 90 bp | TCAGGTTCCTGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCTaGATTTGTTGGCTATATATAGGATGGATTCCCAGGTGGAGCAAC | + |
Preference number: 1 (lower is better) Translates to: SGSCQLELLGIHNSV*ICWLYIGWIPRWSN Trigger: GTTGCTCCACCTGGGAATCCATCCTATATATAGCCAACAAATCCAGACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR GCA 90 bp | GATTCCCAGGTGGAGCAACCTTTGAATGGCCTTCCCTTCAGTCTCTaGTTCATAGTTTGTTTCTGTATTTGCTCCTGTGAGTATTTTATT | + |
Preference number: 1 (lower is better) Translates to: DSQVEQPLNGLPFSL*FIVCFCICSCEYFI Trigger: AATAAAATACTCACAGGAGCAAATACAGAAACAAACTATGAAGCAGAGACTGAAGGGAAGGCCATTCAAAGGTTGCTCCACCTGGGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR TCA 90 bp | GAATGTTCTTCTTTCTCCACATCTTTGCTAGCTTCTGCTGTCACCTaGGTTTTTGATCTTAGTGATTCCGACTGGTATGAGCTGAAATCT | + |
Preference number: 1 (lower is better) Translates to: ECSSFSTSLLASAVT*VFDLSDSDWYELKS Trigger: AGATTTCAGCTCATACCAGTCGGAATCACTAAGATCAAAAACTCAGGTGACAGCAGAAGCTAGCAAAGATGTGGAGAAAGAAGAACATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | GCTACATATGCAGCTCAAGGCATGGGTCCCTCCATGTGTGCTCCTTGGTTGATGCCCCTTAAGTCTCTGTaGGCCCCCACTAGCCCTGTG | + |
Preference number: 2 (lower is better) Translates to: ATYAAQGMGPSMCAPWLMPLKSL*APTSPV Trigger: CACAGGGCTAGTGGGGGCTCACAGAGACTTAAGGGG...CATCAACCAAGGAGCACACATGGAGGGACCCATGCCTTGAGCTGCATATGTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | AGCTCTGCTACATATGCAGCTCAAGGCATGGGTCCCTCCATGTGTGCTCCTTGGAGGTGGAGCAACCTTTaGATGGCCTTCCCTTCAGTC | + |
Preference number: 2 (lower is better) Translates to: SSATYAAQGMGPSMCAPWRWSNL*MAFPSV Trigger: GACTGAAGGGAAGGCCATTCAAAGGTTGCTCCACCT...CCAAGGAGCACACATGGAGGGACCCATGCCTTGAGCTGCATATGTAGCAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | TATGGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGACCCCTTAAGTCTCTGTaGGCCCCCACTAGCCCTGTG | + |
Preference number: 2 (lower is better) Translates to: YGHLIFDIGAKAIQWGRGPLKSL*APTSPV Trigger: CACAGGGCTAGTGGGGGCTCACAGAGACTTAAGGGG...TCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACCATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR CAA 90 bp | CTCCACTGGGGAGCGCATGCTCAGTCCAAACATCAGCCTCTGTATTaGTCATGTTCTGGCAGAGCCTCTCAGGAGACAGCTATATCAGGT | + |
Preference number: 2 (lower is better) Translates to: LHWGAHAQSKHQPLY*SCSGRASQETAISG Trigger: ACCTGATATAGCTGTCTCCTGAGAGGCTCTGCCAGAACATGACAAATACAGAGGCTGATGTTTGGACTGAGCATGCGCTCCCCAGTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR CCA 90 bp | AGCTCTGCTACATATGCAGCTCAAGGCATGGGTCCCTCCATGTGTGCTCCTTGGCCCACTAGCCCTGTGTaGTTAATTGTGTGGCATGTT | + |
Preference number: 2 (lower is better) Translates to: SSATYAAQGMGPSMCAPWPTSPV*LIVWHV Trigger: AACATGCCACACAATTAACCACACAGGGCTAGTGGG...CCAAGGAGCACACATGGAGGGACCCATGCCTTGAGCTGCATATGTAGCAGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | CTGAGGAACTACCAGACTGATTTCCAGACAACTCTGGAAATGGAGGAATGTTCTCCCCTTAAGTCTCTGTaGGCCCCCACTAGCCCTGTG | + |
Preference number: 2 (lower is better) Translates to: LRNYQTDFQTTLEMEECSPLKSL*APTSPV Trigger: CACAGGGCTAGTGGGGGCTCACAGAGACTTAAGGGG...AGAACATTCCTCCATTTCCAGAGTTGTCTGGAAATCAGTCTGGTAGTTCCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | GGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGAACAGTGGGAAAGAGCCCATaGGCACAGAGGAATTTCCCT | + |
Preference number: 2 (lower is better) Translates to: GHLIFDIGAKAIQWGRGTVGKSP*AQRNFP Trigger: AGGGAAATTCCTCTGTGCTCATGGGCTCTTTCCCAC...TGTTCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | AGCTCTGCTACATATGCAGCTCAAGGCATGGGTCCCTCCATGTGTGCTCCTTGGTGTAATCACCATCCCTaGCCTCAAGCTGTATTACAG | + |
Preference number: 2 (lower is better) Translates to: SSATYAAQGMGPSMCAPWCNHHP*PQAVLQ Trigger: CTGTAATACAGCTTGAGGTCAGGGATGGTGATTACA...CCAAGGAGCACACATGGAGGGACCCATGCCTTGAGCTGCATATGTAGCAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | AGCTCTGCTACATATGCAGCTCAAGGCATGGGTCCCTCCATGTGTGCTCCTTGGAGGTTCCTGTCAGCTTaGACTTCTTGGAATCCACAA | + |
Preference number: 2 (lower is better) Translates to: SSATYAAQGMGPSMCAPWRFLSA*TSWNPQ Trigger: TTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCT...CCAAGGAGCACACATGGAGGGACCCATGCCTTGAGCTGCATATGTAGCAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | AGCTCTGCTACATATGCAGCTCAAGGCATGGGTCCCTCCATGTGTGCTCCTTGGGGGGGTCTGGTAGGTTaGTATTATTGTTCTTTCTAT | + |
Preference number: 2 (lower is better) Translates to: SSATYAAQGMGPSMCAPWGGLVG*YYCSFY Trigger: ATAGAAAGAACAATAATATCAACCTACCAGACCCCC...CCAAGGAGCACACATGGAGGGACCCATGCCTTGAGCTGCATATGTAGCAGAGCT 49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR CCA 90 bp | AGCTCTGCTACATATGCAGCTCAAGGCATGGGTCCCTCCATGTGTGCTCCTTGGTGTTGGAGAATCTTTTaGGTATATGGCCAGGAGTAT | + |
Preference number: 2 (lower is better) Translates to: SSATYAAQGMGPSMCAPWCWRIF*VYGQEY Trigger: ATACTCCTGGCCATATACCCAAAAGATTCTCCAACA...CCAAGGAGCACACATGGAGGGACCCATGCCTTGAGCTGCATATGTAGCAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | GCTACATATGCAGCTCAAGGCATGGGTCCCTCCATGTGTGCTCCTTGGTTGATGGGGGGTCTGGTAGGTTaGTATTATTGTTCTTTCTAT | + |
Preference number: 2 (lower is better) Translates to: ATYAAQGMGPSMCAPWLMGGLVG*YYCSFY Trigger: ATAGAAAGAACAATAATATCAACCTACCAGACCCCC...CATCAACCAAGGAGCACACATGGAGGGACCCATGCCTTGAGCTGCATATGTAGC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR CCA 90 bp | TCAAAGGACAAAGGATTTCTCCTACCATTGATGCTGGACAAAGCTCTGCTACATATGCAGCTCAAGGCATaGGTCCCTCCATGTGTGCTC | + |
Preference number: 2 (lower is better) Translates to: SKDKGFLLPLMLDKALLHMQLKA*VPPCVL Trigger: GAGCACACATGGAGGGACCCATGCCTTGAGCTGCAT...ATGTAGCAGAGCTTTGTCCAGCATCAATGGTAGGAGAAATCCTTTGTCCTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR CAA 90 bp | CTGGCAGAGCCTCTCAGGAGACAGCTATATCAGGTTCCTGTCAGCTaGAACTTCTTGGAATCCACAATAGTGTCTGGATTTGTTGGCTAT | + |
Preference number: 2 (lower is better) Translates to: LAEPLRRQLYQVPVS*NFLESTIVSGFVGY Trigger: ATAGCCAACAAATCCAGACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTGATATAGCTGTCTCCTGAGAGGCTCTGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | TCTCTGATGACTAAGGATGTTGAACATTTCTTTAGTTGCTTCCAGGATAGCATACCCCTTAAGTCTCTGTaGGCCCCCACTAGCCCTGTG | + |
Preference number: 2 (lower is better) Translates to: SLMTKDVEHFFSCFQDSIPLKSL*APTSPV Trigger: CACAGGGCTAGTGGGGGCTCACAGAGACTTAAGGGG...TATGCTATCCTGGAAGCAACTAAAGAAATGTTCAACATCCTTAGTCATCAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | GCTACATATGCAGCTCAAGGCATGGGTCCCTCCATGTGTGCTCCTTGGTTGATGGTAGAAGAATGCAAATaGACCCATTCTTATCACCTT | + |
Preference number: 2 (lower is better) Translates to: ATYAAQGMGPSMCAPWLMVEECK*THSYHL Trigger: AAGGTGATAAGAATGGGTTCATTTGCATTCTTCTAC...CATCAACCAAGGAGCACACATGGAGGGACCCATGCCTTGAGCTGCATATGTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR CAA 90 bp | ACTAGGATTGAAGACCCAGAAATTAACCTACACACCTATGGTCACTaGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGA | + |
Preference number: 2 (lower is better) Translates to: TRIEDPEINLHTYGH*IFDIGAKAIQWGRG Trigger: TCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACCATAGGTGTGTAGGTTAATTTCTGGGTCTTCAATCCTAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR-3UTR CCA 90 bp | GCTCAGTCCAAACATCAGCCTCTGTATTTGTCATGTTCTGGCAGAGCCTCTCAGATTTCCAGACAACTCTaGAAATGGAGGAATGTTCTT | + |
Preference number: 2 (lower is better) Translates to: AQSKHQPLYLSCSGRASQISRQL*KWRNVL Trigger: AAGAACATTCCTCCATTTCCAGAGTTGTCTGGAAAT...CTGAGAGGCTCTGCCAGAACATGACAAATACAGAGGCTGATGTTTGGACTGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR CAA 90 bp | GATTTGTTGGCTATATATAGGATGGATTCCCAGGTGGAGCAACCTTaGAATGGCCTTCCCTTCAGTCTCTGCTTCATAGTTTGTTTCTGT | + |
Preference number: 2 (lower is better) Translates to: DLLAIYRMDSQVEQP*NGLPFSLCFIVCFC Trigger: ACAGAAACAAACTATGAAGCAGAGACTGAAGGGAAGGCCATTCAAAGGTTGCTCCACCTGGGAATCCATCCTATATATAGCCAACAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | CAGGTTCCTGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCTGGATTTGTTACAGAGGAATTTCCCTaGACAGAGCACCATTGGTTT | + |
Preference number: 2 (lower is better) Translates to: QVPVSLNFLESTIVSGFVTEEFP*TEHHWF Trigger: AAACCAATGGTGCTCTGTTCAGGGAAATTCCTCTGT...AACAAATCCAGACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | TCTCTGATGACTAAGGATGTTGAACATTTCTTTAGTTGCTTCCAGGATAGCATAGTGGGAAAGAGCCCATaGGCACAGAGGAATTTCCCT | + |
Preference number: 2 (lower is better) Translates to: SLMTKDVEHFFSCFQDSIVGKSP*AQRNFP Trigger: AGGGAAATTCCTCTGTGCTCATGGGCTCTTTCCCAC...TATGCTATCCTGGAAGCAACTAAAGAAATGTTCAACATCCTTAGTCATCAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | ACAGCTATATCAGGTTCCTGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCTGTAATCACCATCCCTaGCCTCAAGCTGTATTACAG | + |
Preference number: 2 (lower is better) Translates to: TAISGSCQLELLGIHNSVCNHHP*PQAVLQ Trigger: CTGTAATACAGCTTGAGGTCAGGGATGGTGATTACA...GACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTGATATAGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR GCA 90 bp | CTGAGGAACTACCAGACTGATTTCCAGACAACTCTGGAAATGGAGGAATGTTCTATTCAGAGGTCCCAGTaGAGACTCATTAAGGCTTTA | + |
Preference number: 2 (lower is better) Translates to: LRNYQTDFQTTLEMEECSIQRSQ*RLIKAL Trigger: TAAAGCCTTAATGAGTCTGCACTGGGACCTCTGAAT...AGAACATTCCTCCATTTCCAGAGTTGTCTGGAAATCAGTCTGGTAGTTCCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR-3UTR CCA 90 bp | CAGAGCAATAGTGATAAAAAGACTACATGGTACTGGTACAGAGACAGGCAAGTACCCACTAGCCCTGTGTaGTTAATTGTGTGGCATGTT | + |
Preference number: 2 (lower is better) Translates to: QSNSDKKTTWYWYRDRQVPTSPV*LIVWHV Trigger: AACATGCCACACAATTAACCACACAGGGCTAGTGGG...TACTTGCCTGTCTCTGTACCAGTACCATGTAGTCTTTTTATCACTATTGCTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR-3UTR CCA 90 bp | GCTCTTCTCTCCACCCTTGAATTTCCCTACACTAAGGCATTGAGCCTTCAAAGGATTTCCAGACAACTCTaGAAATGGAGGAATGTTCTT | + |
Preference number: 2 (lower is better) Translates to: ALLSTLEFPYTKALSLQRISRQL*KWRNVL Trigger: AAGAACATTCCTCCATTTCCAGAGTTGTCTGGAAAT...CCTTTGAAGGCTCAATGCCTTAGTGTAGGGAAATTCAAGGGTGGAGAGAAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | ACAGCTATATCAGGTTCCTGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCGCTTCTGCTGTCACCTaGGTTTTTGATCTTAGTGAT | + |
Preference number: 2 (lower is better) Translates to: TAISGSCQLELLGIHNSVASAVT*VFDLSD Trigger: ATCACTAAGATCAAAAACTCAGGTGACAGCAGAAGC...GACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTGATATAGCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | CAGGTTCCTGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCTGGATTTGTTCTATGTCCAGTTTTCTaGGGAACTACCAGACTGATT | + |
Preference number: 2 (lower is better) Translates to: QVPVSLNFLESTIVSGFVLCPVF*GTTRLI Trigger: AATCAGTCTGGTAGTTCCTCAGAAAACTGGACATAG...AACAAATCCAGACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR CCA 90 bp | CAACCACAACATATATTCAGAGGTCCCAGTGCAGACTCATTAAGGCTTTATAATCCCACTAGCCCTGTGTaGTTAATTGTGTGGCATGTT | + |
Preference number: 2 (lower is better) Translates to: QPQHIFRGPSADSLRLYNPTSPV*LIVWHV Trigger: AACATGCCACACAATTAACCACACAGGGCTAGTGGG...ATTATAAAGCCTTAATGAGTCTGCACTGGGACCTCTGAATATATGTTGTGGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR-3UTR CCA 90 bp | CAGGTTCCTGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCTGGATTTGTTAATCTTTTGGGTATATaGCCAGGAGTATACCACTCC | + |
Preference number: 2 (lower is better) Translates to: QVPVSLNFLESTIVSGFVNLLGI*PGVYHS Trigger: GGAGTGGTATACTCCTGGCCATATACCCAAAAGATT...AACAAATCCAGACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | CTGAGGAACTACCAGACTGATTTCCAGACAACTCTGGAAATGGAGGAATGTTCTGTAGAAGAATGCAAATaGACCCATTCTTATCACCTT | + |
Preference number: 2 (lower is better) Translates to: LRNYQTDFQTTLEMEECSVEECK*THSYHL Trigger: AAGGTGATAAGAATGGGTTCATTTGCATTCTTCTAC...AGAACATTCCTCCATTTCCAGAGTTGTCTGGAAATCAGTCTGGTAGTTCCTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR-3UTR CCA 90 bp | GGTACAGAGCTAAACAAAATATTCTCAACTGAGGAATACCTAATGGCTAAGAAGCCCACTAGCCCTGTGTaGTTAATTGTGTGGCATGTT | + |
Preference number: 2 (lower is better) Translates to: GTELNKIFSTEEYLMAKKPTSPV*LIVWHV Trigger: AACATGCCACACAATTAACCACACAGGGCTAGTGGG...CTTCTTAGCCATTAGGTATTCCTCAGTTGAGAATATTTTGTTTAGCTCTGTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR-3UTR GCA 90 bp | CTGAGGAACTACCAGACTGATTTCCAGACAACTCTGGAAATGGAGGAATGTTCTGAACATTTCTTTAGTTaGTTCCAGGATAGCATAAAG | + |
Preference number: 2 (lower is better) Translates to: LRNYQTDFQTTLEMEECSEHFFS*FQDSIK Trigger: CTTTATGCTATCCTGGAAGCAACTAAAGAAATGTTC...AGAACATTCCTCCATTTCCAGAGTTGTCTGGAAATCAGTCTGGTAGTTCCTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR-3UTR CCA 90 bp | TCAAAGGACAAAGGATTTCTCCTACCATTGATGCTGGACAAAGCTCTGCTACATAGACAACTCTGGAAATaGAGGAATGTTCTTCTTTCT | + |
Preference number: 2 (lower is better) Translates to: SKDKGFLLPLMLDKALLHRQLWK*RNVLLS Trigger: AGAAAGAAGAACATTCCTCCATTTCCAGAGTTGTCT...ATGTAGCAGAGCTTTGTCCAGCATCAATGGTAGGAGAAATCCTTTGTCCTTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR GCA 90 bp | TCTCTGATGACTAAGGATGTTGAACATTTCTTTAGTTGCTTCCAGGATAGCATAATTCAGAGGTCCCAGTaGAGACTCATTAAGGCTTTA | + |
Preference number: 2 (lower is better) Translates to: SLMTKDVEHFFSCFQDSIIQRSQ*RLIKAL Trigger: TAAAGCCTTAATGAGTCTGCACTGGGACCTCTGAAT...TATGCTATCCTGGAAGCAACTAAAGAAATGTTCAACATCCTTAGTCATCAGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR-3UTR TCA 90 bp | TCTCTGATGACTAAGGATGTTGAACATTTCTTTAGTTGCTTCCAGGATAGCATAGTAGAAGAATGCAAATaGACCCATTCTTATCACCTT | + |
Preference number: 2 (lower is better) Translates to: SLMTKDVEHFFSCFQDSIVEECK*THSYHL Trigger: AAGGTGATAAGAATGGGTTCATTTGCATTCTTCTAC...TATGCTATCCTGGAAGCAACTAAAGAAATGTTCAACATCCTTAGTCATCAGAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR-3UTR CAA 90 bp | AGCTCTGCTACATATGCAGCTCAAGGCATGGGTCCCTCCATGTGTGCTCCTTGGCAGGTGGAGCAACCTTaGAATGGCCTTCCCTTCAGT | + |
Preference number: 3 (lower is better) Translates to: SSATYAAQGMGPSMCAPWQVEQP*NGLPFS Trigger: ACTGAAGGGAAGGCCATTCAAAGGTTGCTCCACCTG...CCAAGGAGCACACATGGAGGGACCCATGCCTTGAGCTGCATATGTAGCAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR-3UTR CAA 90 bp | AGCTCTGCTACATATGCAGCTCAAGGCATGGGTCCCTCCATGTGTGCTCCTTGGGTCAGCTTGAACTTCTaGGAATCCACAATAGTGTCT | + |
Preference number: 3 (lower is better) Translates to: SSATYAAQGMGPSMCAPWVSLNF*ESTIVS Trigger: AGACACTATTGTGGATTCCAAGAAGTTCAAGCTGAC...CCAAGGAGCACACATGGAGGGACCCATGCCTTGAGCTGCATATGTAGCAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
||
3UTR-3UTR CAA 90 bp | GCTCAGTCCAAACATCAGCCTCTGTATTTGTCATGTTCTGGCAGAGCCTCTCAGCAGGTTCCTGTCAGCTaGAACTTCTTGGAATCCACA | + |
Preference number: 3 (lower is better) Translates to: AQSKHQPLYLSCSGRASQQVPVS*NFLEST Trigger: TGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTG...CTGAGAGGCTCTGCCAGAACATGACAAATACAGAGGCTGATGTTTGGACTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
||
3UTR GCA 72 bp | TCAGTCCTTTCTCTAATTCCTCCACTGGGGAGCGCATaGTCAGTCCAAACATCAGCCTCTGTATTTGTCATG | + |
Preference number: 3 (lower is better) Translates to: SVLSLIPPLGSA*SVQTSASVFVM Trigger: CATGACAAATACAGAGGCTGATGTTTGGACTGAGCATGCGCTCCCCAGTGGAGGAATTAGAGAAAGGACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
||
3UTR-3UTR CAA 90 bp | GCTCAGTCCAAACATCAGCCTCTGTATTTGTCATGTTCTGGCAGAGCCTCTCAGCTGTCACCTGAGTTTTaGATCTTAGTGATTCCGACT | + |
Preference number: 3 (lower is better) Translates to: AQSKHQPLYLSCSGRASQLSPEF*ILVIPT Trigger: AGTCGGAATCACTAAGATCAAAAACTCAGGTGACAG...CTGAGAGGCTCTGCCAGAACATGACAAATACAGAGGCTGATGTTTGGACTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
||
3UTR-3UTR CAA 90 bp | ACAGCTATATCAGGTTCCTGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCCAGGTGGAGCAACCTTaGAATGGCCTTCCCTTCAGT | + |
Preference number: 3 (lower is better) Translates to: TAISGSCQLELLGIHNSVQVEQP*NGLPFS Trigger: ACTGAAGGGAAGGCCATTCAAAGGTTGCTCCACCTG...GACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTGATATAGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
||
3UTR-3UTR CAA 90 bp | GCTCAGTCCAAACATCAGCCTCTGTATTTGTCATGTTCTGGCAGAGCCTCTCAGATCAATAGACTAGGATaGAAGACCCAGAAATTAACC | + |
Preference number: 3 (lower is better) Translates to: AQSKHQPLYLSCSGRASQINRLG*KTQKLT Trigger: GGTTAATTTCTGGGTCTTCAATCCTAGTCTATTGAT...CTGAGAGGCTCTGCCAGAACATGACAAATACAGAGGCTGATGTTTGGACTGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
||
3UTR TCA 72 bp | TTGAGCCTTCAAAGGACAAAGGATTTCTCCTACCATTaGTGCTGGACAAAGCTCTGCTACATATGCAGCTCA | + |
Preference number: 3 (lower is better) Translates to: LSLQRTKDFSYH*CWTKLCYICSS Trigger: TGAGCTGCATATGTAGCAGAGCTTTGTCCAGCATCAATGGTAGGAGAAATCCTTTGTCCTTTGAAGGCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
||
3UTR-3UTR CAA 90 bp | CTGAGGAACTACCAGACTGATTTCCAGACAACTCTGGAAATGGAGGAATGTTCTATGTACGCACACCCATaGTTAAGACTCTCACAAGAA | + |
Preference number: 3 (lower is better) Translates to: LRNYQTDFQTTLEMEECSMYAHP*LRLSQE Trigger: TTCTTGTGAGAGTCTTAACAATGGGTGTGCGTACAT...AGAACATTCCTCCATTTCCAGAGTTGTCTGGAAATCAGTCTGGTAGTTCCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
||
3UTR-3UTR CAA 90 bp | CTGAGGAACTACCAGACTGATTTCCAGACAACTCTGGAAATGGAGGAATGTTCTCTGTCACCTGAGTTTTaGATCTTAGTGATTCCGACT | + |
Preference number: 3 (lower is better) Translates to: LRNYQTDFQTTLEMEECSLSPEF*ILVIPT Trigger: AGTCGGAATCACTAAGATCAAAAACTCAGGTGACAG...AGAACATTCCTCCATTTCCAGAGTTGTCTGGAAATCAGTCTGGTAGTTCCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
||
3UTR TCA 72 bp | TCTTTCTCCACATCTTTGCTAGCTTCTGCTGTCACCTaGGTTTTTGATCTTAGTGATTCCGACTGGTATGAG | + |
Preference number: 3 (lower is better) Translates to: SFSTSLLASAVT*VFDLSDSDWYE Trigger: CTCATACCAGTCGGAATCACTAAGATCAAAAACTCAGGTGACAGCAGAAGCTAGCAAAGATGTGGAGAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR TCA 72 bp | TTCTCTCCACCCTTGAATTTCCCTACACTAAGGCATTaGGCCTTCAAAGGACAAAGGATTTCTCCTACCATT | + |
Preference number: 3 (lower is better) Translates to: FSPPLNFPTLRH*AFKGQRISPTI Trigger: AATGGTAGGAGAAATCCTTTGTCCTTTGAAGGCTCAATGCCTTAGTGTAGGGAAATTCAAGGGTGGAGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
||
3UTR-3UTR CAA 90 bp | TCAAAGGACAAAGGATTTCTCCTACCATTGATGCTGGACAAAGCTCTGCTACATATGTACGCACACCCATaGTTAAGACTCTCACAAGAA | + |
Preference number: 3 (lower is better) Translates to: SKDKGFLLPLMLDKALLHMYAHP*LRLSQE Trigger: TTCTTGTGAGAGTCTTAACAATGGGTGTGCGTACAT...ATGTAGCAGAGCTTTGTCCAGCATCAATGGTAGGAGAAATCCTTTGTCCTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR CCA 72 bp | TGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCTaGATTTGTTGGCTATATATAGGATGGATTCCCAGG | + |
Preference number: 3 (lower is better) Translates to: CQLELLGIHNSV*ICWLYIGWIPR Trigger: CCTGGGAATCCATCCTATATATAGCCAACAAATCCAGACACTATTGTGGATTCCAAGAAGTTCAAGCTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR CCA 72 bp | ACCTTTTCTGTATCTATGCCTCTGTTGAAGTACATCTaGGTTCTTTCCAGCTTCTGGCTATTACAAATAAGG | + |
Preference number: 3 (lower is better) Translates to: TFSVSMPLLKYI*VLSSFWLLQIR Trigger: CCTTATTTGTAATAGCCAGAAGCTGGAAAGAACCCAGATGTACTTCAACAGAGGCATAGATACAGAAAAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
||
3UTR CCA 72 bp | TGCTATGAACATAGTGTTATATGTTGGAGAATCTTTTaGGTATATGGCCAGGAGTATACCACTCCTATACCA | + |
Preference number: 3 (lower is better) Translates to: CYEHSVICWRIF*VYGQEYTTPIP Trigger: TGGTATAGGAGTGGTATACTCCTGGCCATATACCCAAAAGATTCTCCAACATATAACACTATGTTCATAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR CAA 72 bp | GGAGCGCATGCTCAGTCCAAACATCAGCCTCTGTATTaGTCATGTTCTGGCAGAGCCTCTCAGGAGACAGCT | + |
Preference number: 4 (lower is better) Translates to: GAHAQSKHQPLY*SCSGRASQETA Trigger: AGCTGTCTCCTGAGAGGCTCTGCCAGAACATGACAAATACAGAGGCTGATGTTTGGACTGAGCATGCGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | GGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGAACAGTCCACGGTAGACAGTaGCTCTTCATGTATGAGCTG | + |
Preference number: 4 (lower is better) Translates to: GHLIFDIGAKAIQWGRGTVHGRQ*LFMYEL Trigger: CAGCTCATACATGAAGAGTCACTGTCTACCGTGGAC...TGTTCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | GCCCCCACTAGCCCTGTGTGGTTAATTGTGTGGCATGTTTTCCTGATGTCTTCAGTCCACGGTAGACAGTaGCTCTTCATGTATGAGCTG | + |
Preference number: 4 (lower is better) Translates to: APTSPVWLIVWHVFLMSSVHGRQ*LFMYEL Trigger: CAGCTCATACATGAAGAGTCACTGTCTACCGTGGAC...TGAAGACATCAGGAAAACATGCCACACAATTAACCACACAGGGCTAGTGGGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR GCA 90 bp | GGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGAACAACAGGGTCCTCCAGTTaGTTCTGCTTCCTTCATGTG | + |
Preference number: 4 (lower is better) Translates to: GHLIFDIGAKAIQWGRGTTGSSS*FCFLHV Trigger: CACATGAAGGAAGCAGAAGCAACTGGAGGACCCTGT...TGTTCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR GCA 90 bp | GCCCCCACTAGCCCTGTGTGGTTAATTGTGTGGCATGTTTTCCTGATGTCTTCAACAGGGTCCTCCAGTTaGTTCTGCTTCCTTCATGTG | + |
Preference number: 4 (lower is better) Translates to: APTSPVWLIVWHVFLMSSTGSSS*FCFLHV Trigger: CACATGAAGGAAGCAGAAGCAACTGGAGGACCCTGT...TGAAGACATCAGGAAAACATGCCACACAATTAACCACACAGGGCTAGTGGGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
||
CDS-3UTR TCA 90 bp | GCTACATATGCAGCTCAAGGCATGGGTCCCTCCATGTGTGCTCCTTGGTTGATGTTGATGTGGCTTGAATaGCCTCTCCTTTGCTATTTC | + |
Preference number: 4 (lower is better) Translates to: ATYAAQGMGPSMCAPWLMLMWLE*PLLCYF Trigger: GAAATAGCAAAGGAGAGGTCATTCAAGCCACATCAA...CATCAACCAAGGAGCACACATGGAGGGACCCATGCCTTGAGCTGCATATGTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | GGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGAACATCTGCTTCCTTCATGTaGATGCACAGTCCAATGCAC | + |
Preference number: 4 (lower is better) Translates to: GHLIFDIGAKAIQWGRGTSASFM*MHSPMH Trigger: GTGCATTGGACTGTGCATTCACATGAAGGAAGCAGA...TGTTCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | TATGGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGACAATATGGGCCTCTGTaGGCCAATCACTGTAAAGTG | + |
Preference number: 4 (lower is better) Translates to: YGHLIFDIGAKAIQWGRGQYGPL*ANHCKV Trigger: CACTTTACAGTGATTGGCTCACAGAGGCCCATATTG...TCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | GCTACATATGCAGCTCAAGGCATGGGTCCCTCCATGTGTGCTCCTTGGTTGATGAATTTTGATGTGGCTTaGATGACCTCTCCTTTGCTA | + |
Preference number: 4 (lower is better) Translates to: ATYAAQGMGPSMCAPWLMNFDVA*MTSPLL Trigger: TAGCAAAGGAGAGGTCATTCAAGCCACATCAAAATT...CATCAACCAAGGAGCACACATGGAGGGACCCATGCCTTGAGCTGCATATGTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | TATGGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGATCTGCTTCCTTCATGTaGATGCACAGTCCAATGCAC | + |
Preference number: 4 (lower is better) Translates to: YGHLIFDIGAKAIQWGRGSASFM*MHSPMH Trigger: GTGCATTGGACTGTGCATTCACATGAAGGAAGCAGA...TCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR GCA 90 bp | GGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGAACAAATCTCCATGTGTTGTaGTTGTTGTGGTGGGGACAA | + |
Preference number: 4 (lower is better) Translates to: GHLIFDIGAKAIQWGRGTNLHVL*LLWWGQ Trigger: TTGTCCCCACCACAACAAGCACAACACATGGAGATT...TGTTCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | GCCCCCACTAGCCCTGTGTGGTTAATTGTGTGGCATGTTTTCCTGATGTCTTCATTTGAAAGTAGCAAATaGCATTCCTGTGAGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: APTSPVWLIVWHVFLMSSFESSK*HSCESW Trigger: CCAGCTCTCACAGGAATGTCATTTGCTACTTTCAAA...TGAAGACATCAGGAAAACATGCCACACAATTAACCACACAGGGCTAGTGGGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR GCA 90 bp | CTGAGGAACTACCAGACTGATTTCCAGACAACTCTGGAAATGGAGGAATGTTCTACAGGGTCCTCCAGTTaGTTCTGCTTCCTTCATGTG | + |
Preference number: 4 (lower is better) Translates to: LRNYQTDFQTTLEMEECSTGSSS*FCFLHV Trigger: CACATGAAGGAAGCAGAAGCAACTGGAGGACCCTGT...AGAACATTCCTCCATTTCCAGAGTTGTCTGGAAATCAGTCTGGTAGTTCCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | CTGAGGAACTACCAGACTGATTTCCAGACAACTCTGGAAATGGAGGAATGTTCTCAATATGGGCCTCTGTaGGCCAATCACTGTAAAGTG | + |
Preference number: 4 (lower is better) Translates to: LRNYQTDFQTTLEMEECSQYGPL*ANHCKV Trigger: CACTTTACAGTGATTGGCTCACAGAGGCCCATATTG...AGAACATTCCTCCATTTCCAGAGTTGTCTGGAAATCAGTCTGGTAGTTCCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | TATGGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGATTGATGTGGCTTGAATaGCCTCTCCTTTGCTATTTC | + |
Preference number: 4 (lower is better) Translates to: YGHLIFDIGAKAIQWGRGLMWLE*PLLCYF Trigger: GAAATAGCAAAGGAGAGGTCATTCAAGCCACATCAA...TCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | ACAGCTATATCAGGTTCCTGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCGTCCACGGTAGACAGTaGCTCTTCATGTATGAGCTG | + |
Preference number: 4 (lower is better) Translates to: TAISGSCQLELLGIHNSVVHGRQ*LFMYEL Trigger: CAGCTCATACATGAAGAGTCACTGTCTACCGTGGAC...GACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTGATATAGCTGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | GGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGAACATATGATTGCAAACACTaGAATTATGGGTACCACTGC | + |
Preference number: 4 (lower is better) Translates to: GHLIFDIGAKAIQWGRGTYDCKH*NYGYHC Trigger: GCAGTGGTACCCATAATTTCAGTGTTTGCAATCATA...TGTTCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | GCCCCCACTAGCCCTGTGTGGTTAATTGTGTGGCATGTTTTCCTGATGTCTTCATATGATTGCAAACACTaGAATTATGGGTACCACTGC | + |
Preference number: 4 (lower is better) Translates to: APTSPVWLIVWHVFLMSSYDCKH*NYGYHC Trigger: GCAGTGGTACCCATAATTTCAGTGTTTGCAATCATA...TGAAGACATCAGGAAAACATGCCACACAATTAACCACACAGGGCTAGTGGGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CCA 90 bp | GGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGAACATCTTTAAAGACACAGTaGTATGCACCACCATCATCA | + |
Preference number: 4 (lower is better) Translates to: GHLIFDIGAKAIQWGRGTSLKTQ*YAPPSS Trigger: TGATGATGGTGGTGCATACCACTGTGTCTTTAAAGA...TGTTCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR CAA 72 bp | GCTATATATAGGATGGATTCCCAGGTGGAGCAACCTTaGAATGGCCTTCCCTTCAGTCTCTGCTTCATAGTT | + |
Preference number: 4 (lower is better) Translates to: AIYRMDSQVEQP*NGLPFSLCFIV Trigger: AACTATGAAGCAGAGACTGAAGGGAAGGCCATTCAAAGGTTGCTCCACCTGGGAATCCATCCTATATATAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | GCTCAGTCCAAACATCAGCCTCTGTATTTGTCATGTTCTGGCAGAGCCTCTCAGCGATTGAGAAATAAATaGAATGCAGGAATACCACTG | + |
Preference number: 4 (lower is better) Translates to: AQSKHQPLYLSCSGRASQRLRNK*NAGIPL Trigger: CAGTGGTATTCCTGCATTTCATTTATTTCTCAATCG...CTGAGAGGCTCTGCCAGAACATGACAAATACAGAGGCTGATGTTTGGACTGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
||
CDS-3UTR TCA 90 bp | ACAGCTATATCAGGTTCCTGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCTCTGCTTCCTTCATGTaGATGCACAGTCCAATGCAC | + |
Preference number: 4 (lower is better) Translates to: TAISGSCQLELLGIHNSVSASFM*MHSPMH Trigger: GTGCATTGGACTGTGCATTCACATGAAGGAAGCAGA...GACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTGATATAGCTGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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CDS-3UTR GCA 90 bp | GGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGAACAACTCTTTGTTCTAGATaGAAAAAGAGCATGACTCCT | + |
Preference number: 4 (lower is better) Translates to: GHLIFDIGAKAIQWGRGTTLCSR*KKSMTP Trigger: AGGAGTCATGCTCTTTTTGCATCTAGAACAAAGAGT...TGTTCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR GCA 90 bp | GCCCCCACTAGCCCTGTGTGGTTAATTGTGTGGCATGTTTTCCTGATGTCTTCATTACGTAATTGCAGATaGACAAGAAGGATTGTTCCA | + |
Preference number: 4 (lower is better) Translates to: APTSPVWLIVWHVFLMSSLRNCR*TRRIVP Trigger: TGGAACAATCCTTCTTGTGCATCTGCAATTACGTAA...TGAAGACATCAGGAAAACATGCCACACAATTAACCACACAGGGCTAGTGGGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
||
CDS-3UTR GCA 90 bp | GGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGAACATTACGTAATTGCAGATaGACAAGAAGGATTGTTCCA | + |
Preference number: 4 (lower is better) Translates to: GHLIFDIGAKAIQWGRGTLRNCR*TRRIVP Trigger: TGGAACAATCCTTCTTGTGCATCTGCAATTACGTAA...TGTTCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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3UTR CAA 72 bp | CCTCTCAGGAGACAGCTATATCAGGTTCCTGTCAGCTaGAACTTCTTGGAATCCACAATAGTGTCTGGATTT | + |
Preference number: 4 (lower is better) Translates to: PLRRQLYQVPVS*NFLESTIVSGF Trigger: AAATCCAGACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTGATATAGCTGTCTCCTGAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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3UTR CAA 72 bp | ATTGAGCCTTCAAAGGACAAAGGATTTCTCCTACCATaGATGCTGGACAAAGCTCTGCTACATATGCAGCTC | + |
Preference number: 4 (lower is better) Translates to: IEPSKDKGFLLP*MLDKALLHMQL Trigger: GAGCTGCATATGTAGCAGAGCTTTGTCCAGCATCAATGGTAGGAGAAATCCTTTGTCCTTTGAAGGCTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
||
3UTR CAA 72 bp | CTTCTCTCCACCCTTGAATTTCCCTACACTAAGGCATaGAGCCTTCAAAGGACAAAGGATTTCTCCTACCAT | + |
Preference number: 4 (lower is better) Translates to: LLSTLEFPYTKA*SLQRTKDFSYH Trigger: ATGGTAGGAGAAATCCTTTGTCCTTTGAAGGCTCAATGCCTTAGTGTAGGGAAATTCAAGGGTGGAGAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
||
CDS-3UTR TCA 90 bp | CAGAGCAATAGTGATAAAAAGACTACATGGTACTGGTACAGAGACAGGCAAGTATCTGCTTCCTTCATGTaGATGCACAGTCCAATGCAC | + |
Preference number: 4 (lower is better) Translates to: QSNSDKKTTWYWYRDRQVSASFM*MHSPMH Trigger: GTGCATTGGACTGTGCATTCACATGAAGGAAGCAGA...TACTTGCCTGTCTCTGTACCAGTACCATGTAGTCTTTTTATCACTATTGCTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
||
CDS-3UTR GCA 90 bp | ACAGCTATATCAGGTTCCTGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCAATCTCCATGTGTTGTaGTTGTTGTGGTGGGGACAA | + |
Preference number: 4 (lower is better) Translates to: TAISGSCQLELLGIHNSVNLHVL*LLWWGQ Trigger: TTGTCCCCACCACAACAAGCACAACACATGGAGATT...GACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTGATATAGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
||
CDS-3UTR GCA 90 bp | GCCCCCACTAGCCCTGTGTGGTTAATTGTGTGGCATGTTTTCCTGATGTCTTCAGAACACAGTAAGTCATaGAGAAATCTATCATCACAA | + |
Preference number: 4 (lower is better) Translates to: APTSPVWLIVWHVFLMSSEHSKS*RNLSSQ Trigger: TTGTGATGATAGATTTCTGCATGACTTACTGTGTTC...TGAAGACATCAGGAAAACATGCCACACAATTAACCACACAGGGCTAGTGGGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
||
3UTR CAA 72 bp | CATGAGCACAGAGGAATTTCCCTGAACAGAGCACCATaGGTTTATGCTCTGAGATCAAGAAACAACAAATGG | + |
Preference number: 4 (lower is better) Translates to: HEHRGISLNRAP*VYALRSRNNKW Trigger: CCATTTGTTGTTTCTTGATCTCAGAGCATAAACCAATGGTGCTCTGTTCAGGGAAATTCCTCTGTGCTCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
||
CDS-3UTR TCA 90 bp | CTGAGGAACTACCAGACTGATTTCCAGACAACTCTGGAAATGGAGGAATGTTCTAATTTTGATGTGGCTTaGATGACCTCTCCTTTGCTA | + |
Preference number: 4 (lower is better) Translates to: LRNYQTDFQTTLEMEECSNFDVA*MTSPLL Trigger: TAGCAAAGGAGAGGTCATTCAAGCCACATCAAAATT...AGAACATTCCTCCATTTCCAGAGTTGTCTGGAAATCAGTCTGGTAGTTCCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | TCAAAGGACAAAGGATTTCTCCTACCATTGATGCTGGACAAAGCTCTGCTACATTTTGAAAGTAGCAAATaGCATTCCTGTGAGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: SKDKGFLLPLMLDKALLHFESSK*HSCESW Trigger: CCAGCTCTCACAGGAATGTCATTTGCTACTTTCAAA...ATGTAGCAGAGCTTTGTCCAGCATCAATGGTAGGAGAAATCCTTTGTCCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
||
CDS-3UTR TCA 90 bp | TCTCTGATGACTAAGGATGTTGAACATTTCTTTAGTTGCTTCCAGGATAGCATAGTCCACGGTAGACAGTaGCTCTTCATGTATGAGCTG | + |
Preference number: 4 (lower is better) Translates to: SLMTKDVEHFFSCFQDSIVHGRQ*LFMYEL Trigger: CAGCTCATACATGAAGAGTCACTGTCTACCGTGGAC...TATGCTATCCTGGAAGCAACTAAAGAAATGTTCAACATCCTTAGTCATCAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
||
CDS-3UTR GCA 90 bp | CAGAGCAATAGTGATAAAAAGACTACATGGTACTGGTACAGAGACAGGCAAGTAAATCTCCATGTGTTGTaGTTGTTGTGGTGGGGACAA | + |
Preference number: 4 (lower is better) Translates to: QSNSDKKTTWYWYRDRQVNLHVL*LLWWGQ Trigger: TTGTCCCCACCACAACAAGCACAACACATGGAGATT...TACTTGCCTGTCTCTGTACCAGTACCATGTAGTCTTTTTATCACTATTGCTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
||
CDS-3UTR GCA 90 bp | GGTACAGAGCTAAACAAAATATTCTCAACTGAGGAATACCTAATGGCTAAGAAGACAGGGTCCTCCAGTTaGTTCTGCTTCCTTCATGTG | + |
Preference number: 4 (lower is better) Translates to: GTELNKIFSTEEYLMAKKTGSSS*FCFLHV Trigger: CACATGAAGGAAGCAGAAGCAACTGGAGGACCCTGT...CTTCTTAGCCATTAGGTATTCCTCAGTTGAGAATATTTTGTTTAGCTCTGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
||
CDS-3UTR CCA 90 bp | CTGAGGAACTACCAGACTGATTTCCAGACAACTCTGGAAATGGAGGAATGTTCTTCTTTAAAGACACAGTaGTATGCACCACCATCATCA | + |
Preference number: 4 (lower is better) Translates to: LRNYQTDFQTTLEMEECSSLKTQ*YAPPSS Trigger: TGATGATGGTGGTGCATACCACTGTGTCTTTAAAGA...AGAACATTCCTCCATTTCCAGAGTTGTCTGGAAATCAGTCTGGTAGTTCCTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
||
3UTR CAA 72 bp | AGACAGCTATATCAGGTTCCTGTCAGCTTGAACTTCTaGGAATCCACAATAGTGTCTGGATTTGTTGGCTAT | + |
Preference number: 4 (lower is better) Translates to: RQLYQVPVSLNF*ESTIVSGFVGY Trigger: ATAGCCAACAAATCCAGACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTGATATAGCTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | GGTACAGAGCTAAACAAAATATTCTCAACTGAGGAATACCTAATGGCTAAGAAGCAATATGGGCCTCTGTaGGCCAATCACTGTAAAGTG | + |
Preference number: 4 (lower is better) Translates to: GTELNKIFSTEEYLMAKKQYGPL*ANHCKV Trigger: CACTTTACAGTGATTGGCTCACAGAGGCCCATATTG...CTTCTTAGCCATTAGGTATTCCTCAGTTGAGAATATTTTGTTTAGCTCTGTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
||
CDS-3UTR TCA 90 bp | TCTCTGATGACTAAGGATGTTGAACATTTCTTTAGTTGCTTCCAGGATAGCATACAATATGGGCCTCTGTaGGCCAATCACTGTAAAGTG | + |
Preference number: 4 (lower is better) Translates to: SLMTKDVEHFFSCFQDSIQYGPL*ANHCKV Trigger: CACTTTACAGTGATTGGCTCACAGAGGCCCATATTG...TATGCTATCCTGGAAGCAACTAAAGAAATGTTCAACATCCTTAGTCATCAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | CAGAGCAATAGTGATAAAAAGACTACATGGTACTGGTACAGAGACAGGCAAGTATTGATGTGGCTTGAATaGCCTCTCCTTTGCTATTTC | + |
Preference number: 4 (lower is better) Translates to: QSNSDKKTTWYWYRDRQVLMWLE*PLLCYF Trigger: GAAATAGCAAAGGAGAGGTCATTCAAGCCACATCAA...TACTTGCCTGTCTCTGTACCAGTACCATGTAGTCTTTTTATCACTATTGCTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
||
CDS-3UTR TCA 90 bp | CTGAGGAACTACCAGACTGATTTCCAGACAACTCTGGAAATGGAGGAATGTTCTCGATTGAGAAATAAATaGAATGCAGGAATACCACTG | + |
Preference number: 4 (lower is better) Translates to: LRNYQTDFQTTLEMEECSRLRNK*NAGIPL Trigger: CAGTGGTATTCCTGCATTTCATTTATTTCTCAATCG...AGAACATTCCTCCATTTCCAGAGTTGTCTGGAAATCAGTCTGGTAGTTCCTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR GCA 90 bp | CAACCACAACATATATTCAGAGGTCCCAGTGCAGACTCATTAAGGCTTTATAATAATCTCCATGTGTTGTaGTTGTTGTGGTGGGGACAA | + |
Preference number: 4 (lower is better) Translates to: QPQHIFRGPSADSLRLYNNLHVL*LLWWGQ Trigger: TTGTCCCCACCACAACAAGCACAACACATGGAGATT...ATTATAAAGCCTTAATGAGTCTGCACTGGGACCTCTGAATATATGTTGTGGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR GCA 90 bp | CAGAGCAATAGTGATAAAAAGACTACATGGTACTGGTACAGAGACAGGCAAGTAAAAGACACAGTGGTATaGACCACCATCATCAACAGT | + |
Preference number: 4 (lower is better) Translates to: QSNSDKKTTWYWYRDRQVKDTVV*TTIINS Trigger: ACTGTTGATGATGGTGGTGCATACCACTGTGTCTTT...TACTTGCCTGTCTCTGTACCAGTACCATGTAGTCTTTTTATCACTATTGCTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR GCA 90 bp | CTGAGGAACTACCAGACTGATTTCCAGACAACTCTGGAAATGGAGGAATGTTCTACTCTTTGTTCTAGATaGAAAAAGAGCATGACTCCT | + |
Preference number: 4 (lower is better) Translates to: LRNYQTDFQTTLEMEECSTLCSR*KKSMTP Trigger: AGGAGTCATGCTCTTTTTGCATCTAGAACAAAGAGT...AGAACATTCCTCCATTTCCAGAGTTGTCTGGAAATCAGTCTGGTAGTTCCTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | CAGAGCAATAGTGATAAAAAGACTACATGGTACTGGTACAGAGACAGGCAAGTATGTGGTGGGGACAATTaGCAATTGAGTTCTACATTT | + |
Preference number: 4 (lower is better) Translates to: QSNSDKKTTWYWYRDRQVCGGDN*QLSSTF Trigger: AAATGTAGAACTCAATTGTCAATTGTCCCCACCACA...TACTTGCCTGTCTCTGTACCAGTACCATGTAGTCTTTTTATCACTATTGCTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | CAGGTTCCTGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCTGGATTTGTTCGATTGAGAAATAAATaGAATGCAGGAATACCACTG | + |
Preference number: 4 (lower is better) Translates to: QVPVSLNFLESTIVSGFVRLRNK*NAGIPL Trigger: CAGTGGTATTCCTGCATTTCATTTATTTCTCAATCG...AACAAATCCAGACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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CDS-3UTR GCA 90 bp | ACAGCTATATCAGGTTCCTGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCACTCTTTGTTCTAGATaGAAAAAGAGCATGACTCCT | + |
Preference number: 4 (lower is better) Translates to: TAISGSCQLELLGIHNSVTLCSR*KKSMTP Trigger: AGGAGTCATGCTCTTTTTGCATCTAGAACAAAGAGT...GACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTGATATAGCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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CDS-3UTR GCA 90 bp | CAGGTTCCTGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCTGGATTTGTTTTACGTAATTGCAGATaGACAAGAAGGATTGTTCCA | + |
Preference number: 4 (lower is better) Translates to: QVPVSLNFLESTIVSGFVLRNCR*TRRIVP Trigger: TGGAACAATCCTTCTTGTGCATCTGCAATTACGTAA...AACAAATCCAGACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | TCTCTGATGACTAAGGATGTTGAACATTTCTTTAGTTGCTTCCAGGATAGCATAGGGACAATTGACAATTaGGTTCTACATTTCCACCCA | + |
Preference number: 4 (lower is better) Translates to: SLMTKDVEHFFSCFQDSIGTIDN*VLHFHP Trigger: TGGGTGGAAATGTAGAACTCAATTGTCAATTGTCCC...TATGCTATCCTGGAAGCAACTAAAGAAATGTTCAACATCCTTAGTCATCAGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | CAACCACAACATATATTCAGAGGTCCCAGTGCAGACTCATTAAGGCTTTATAATTGTGGTGGGGACAATTaGCAATTGAGTTCTACATTT | + |
Preference number: 4 (lower is better) Translates to: QPQHIFRGPSADSLRLYNCGGDN*QLSSTF Trigger: AAATGTAGAACTCAATTGTCAATTGTCCCCACCACA...ATTATAAAGCCTTAATGAGTCTGCACTGGGACCTCTGAATATATGTTGTGGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | GGTACAGAGCTAAACAAAATATTCTCAACTGAGGAATACCTAATGGCTAAGAAGTTGATGTGGCTTGAATaGCCTCTCCTTTGCTATTTC | + |
Preference number: 4 (lower is better) Translates to: GTELNKIFSTEEYLMAKKLMWLE*PLLCYF Trigger: GAAATAGCAAAGGAGAGGTCATTCAAGCCACATCAA...CTTCTTAGCCATTAGGTATTCCTCAGTTGAGAATATTTTGTTTAGCTCTGTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | GGTACAGAGCTAAACAAAATATTCTCAACTGAGGAATACCTAATGGCTAAGAAGTTTGAAAGTAGCAAATaGCATTCCTGTGAGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: GTELNKIFSTEEYLMAKKFESSK*HSCESW Trigger: CCAGCTCTCACAGGAATGTCATTTGCTACTTTCAAA...CTTCTTAGCCATTAGGTATTCCTCAGTTGAGAATATTTTGTTTAGCTCTGTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | CAACCACAACATATATTCAGAGGTCCCAGTGCAGACTCATTAAGGCTTTATAATTATGATTGCAAACACTaGAATTATGGGTACCACTGC | + |
Preference number: 4 (lower is better) Translates to: QPQHIFRGPSADSLRLYNYDCKH*NYGYHC Trigger: GCAGTGGTACCCATAATTTCAGTGTTTGCAATCATA...ATTATAAAGCCTTAATGAGTCTGCACTGGGACCTCTGAATATATGTTGTGGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR GCA 90 bp | ACAGCTATATCAGGTTCCTGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCGAACACAGTAAGTCATaGAGAAATCTATCATCACAA | + |
Preference number: 4 (lower is better) Translates to: TAISGSCQLELLGIHNSVEHSKS*RNLSSQ Trigger: TTGTGATGATAGATTTCTGCATGACTTACTGTGTTC...GACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTGATATAGCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | GGTACAGAGCTAAACAAAATATTCTCAACTGAGGAATACCTAATGGCTAAGAAGAATTTTGATGTGGCTTaGATGACCTCTCCTTTGCTA | + |
Preference number: 4 (lower is better) Translates to: GTELNKIFSTEEYLMAKKNFDVA*MTSPLL Trigger: TAGCAAAGGAGAGGTCATTCAAGCCACATCAAAATT...CTTCTTAGCCATTAGGTATTCCTCAGTTGAGAATATTTTGTTTAGCTCTGTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | TCTCTGATGACTAAGGATGTTGAACATTTCTTTAGTTGCTTCCAGGATAGCATAAATTTTGATGTGGCTTaGATGACCTCTCCTTTGCTA | + |
Preference number: 4 (lower is better) Translates to: SLMTKDVEHFFSCFQDSINFDVA*MTSPLL Trigger: TAGCAAAGGAGAGGTCATTCAAGCCACATCAAAATT...TATGCTATCCTGGAAGCAACTAAAGAAATGTTCAACATCCTTAGTCATCAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CCA 90 bp | GGTACAGAGCTAAACAAAATATTCTCAACTGAGGAATACCTAATGGCTAAGAAGTCTTTAAAGACACAGTaGTATGCACCACCATCATCA | + |
Preference number: 4 (lower is better) Translates to: GTELNKIFSTEEYLMAKKSLKTQ*YAPPSS Trigger: TGATGATGGTGGTGCATACCACTGTGTCTTTAAAGA...CTTCTTAGCCATTAGGTATTCCTCAGTTGAGAATATTTTGTTTAGCTCTGTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR TCA 90 bp | ATTGTTAAGACTCTCACAAGAAGAACAAGCCTAACAACCACAACATATATTCAGTGTGGTGGGGACAATTaGCAATTGAGTTCTACATTT | + |
Preference number: 4 (lower is better) Translates to: IVKTLTRRTSLTTTTYIQCGGDN*QLSSTF Trigger: AAATGTAGAACTCAATTGTCAATTGTCCCCACCACA...CTGAATATATGTTGTGGTTGTTAGGCTTGTTCTTCTTGTGAGAGTCTTAACAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR GCA 90 bp | CAACCACAACATATATTCAGAGGTCCCAGTGCAGACTCATTAAGGCTTTATAATGAACACAGTAAGTCATaGAGAAATCTATCATCACAA | + |
Preference number: 4 (lower is better) Translates to: QPQHIFRGPSADSLRLYNEHSKS*RNLSSQ Trigger: TTGTGATGATAGATTTCTGCATGACTTACTGTGTTC...ATTATAAAGCCTTAATGAGTCTGCACTGGGACCTCTGAATATATGTTGTGGTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR GCA 90 bp | TCTCTGATGACTAAGGATGTTGAACATTTCTTTAGTTGCTTCCAGGATAGCATAACTCTTTGTTCTAGATaGAAAAAGAGCATGACTCCT | + |
Preference number: 4 (lower is better) Translates to: SLMTKDVEHFFSCFQDSITLCSR*KKSMTP Trigger: AGGAGTCATGCTCTTTTTGCATCTAGAACAAAGAGT...TATGCTATCCTGGAAGCAACTAAAGAAATGTTCAACATCCTTAGTCATCAGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CCA 90 bp | ATTGTTAAGACTCTCACAAGAAGAACAAGCCTAACAACCACAACATATATTCAGTCTTTAAAGACACAGTaGTATGCACCACCATCATCA | + |
Preference number: 4 (lower is better) Translates to: IVKTLTRRTSLTTTTYIQSLKTQ*YAPPSS Trigger: TGATGATGGTGGTGCATACCACTGTGTCTTTAAAGA...CTGAATATATGTTGTGGTTGTTAGGCTTGTTCTTCTTGTGAGAGTCTTAACAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR GCA 90 bp | ATTGTTAAGACTCTCACAAGAAGAACAAGCCTAACAACCACAACATATATTCAGTTACGTAATTGCAGATaGACAAGAAGGATTGTTCCA | + |
Preference number: 4 (lower is better) Translates to: IVKTLTRRTSLTTTTYIQLRNCR*TRRIVP Trigger: TGGAACAATCCTTCTTGTGCATCTGCAATTACGTAA...CTGAATATATGTTGTGGTTGTTAGGCTTGTTCTTCTTGTGAGAGTCTTAACAAT 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR GCA 90 bp | ATTGTTAAGACTCTCACAAGAAGAACAAGCCTAACAACCACAACATATATTCAGGAACACAGTAAGTCATaGAGAAATCTATCATCACAA | + |
Preference number: 4 (lower is better) Translates to: IVKTLTRRTSLTTTTYIQEHSKS*RNLSSQ Trigger: TTGTGATGATAGATTTCTGCATGACTTACTGTGTTC...CTGAATATATGTTGTGGTTGTTAGGCTTGTTCTTCTTGTGAGAGTCTTAACAAT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
||
CDS-3UTR CAA 90 bp | GCCCCCACTAGCCCTGTGTGGTTAATTGTGTGGCATGTTTTCCTGATGTCTTCACACAGGGTCCTCCAGTaGCTTCTGCTTCCTTCATGT | + |
Preference number: 5 (lower is better) Translates to: APTSPVWLIVWHVFLMSSHRVLQ*LLLPSC Trigger: ACATGAAGGAAGCAGAAGCAACTGGAGGACCCTGTG...TGAAGACATCAGGAAAACATGCCACACAATTAACCACACAGGGCTAGTGGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | GGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGAACACACAGGGTCCTCCAGTaGCTTCTGCTTCCTTCATGT | + |
Preference number: 5 (lower is better) Translates to: GHLIFDIGAKAIQWGRGTHRVLQ*LLLPSC Trigger: ACATGAAGGAAGCAGAAGCAACTGGAGGACCCTGTG...TGTTCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | TATGGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGACACAGGGTCCTCCAGTaGCTTCTGCTTCCTTCATGT | + |
Preference number: 5 (lower is better) Translates to: YGHLIFDIGAKAIQWGRGHRVLQ*LLLPSC Trigger: ACATGAAGGAAGCAGAAGCAACTGGAGGACCCTGTG...TCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | TCAAGGCATGGGTCCCTCCATGTGTGCTCCTTGGTTGATGGTTTAGTCCCTAGGAGGAATACCACTGCTTaGTTTAATATTGGGGAACGG | + |
Preference number: 5 (lower is better) Translates to: SRHGSLHVCSLVDGLVPRRNTTA*FNIGER Trigger: CCGTTCCCCAATATTAAACAAAGCAGTGGTATTCCT...CCTAGGGACTAAACCATCAACCAAGGAGCACACATGGAGGGACCCATGCCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | GGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGAACAGGTATGAGATTGATGTaGGACACTATCACCACACAC | + |
Preference number: 5 (lower is better) Translates to: GHLIFDIGAKAIQWGRGTGMRLM*DTITTH Trigger: GTGTGTGGTGATAGTGTCCAACATCAATCTCATACC...TGTTCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | GCTCTTCTCTCCACCCTTGAATTTCCCTACACTAAGGCATTGAGCCTTCAAAGGGGTATGAGATTGATGTaGGACACTATCACCACACAC | + |
Preference number: 5 (lower is better) Translates to: ALLSTLEFPYTKALSLQRGMRLM*DTITTH Trigger: GTGTGTGGTGATAGTGTCCAACATCAATCTCATACC...CCTTTGAAGGCTCAATGCCTTAGTGTAGGGAAATTCAAGGGTGGAGAGAAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | GGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGAACAAGGAATACCACTGCTTaGTTTAATATTGGGGAACGG | + |
Preference number: 5 (lower is better) Translates to: GHLIFDIGAKAIQWGRGTRNTTA*FNIGER Trigger: CCGTTCCCCAATATTAAACAAAGCAGTGGTATTCCT...TGTTCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | GCCCCCACTAGCCCTGTGTGGTTAATTGTGTGGCATGTTTTCCTGATGTCTTCATTGTGGTGGGGACAATaGACAATTGAGTTCTACATT | + |
Preference number: 5 (lower is better) Translates to: APTSPVWLIVWHVFLMSSLWWGQ*TIEFYI Trigger: AATGTAGAACTCAATTGTCAATTGTCCCCACCACAA...TGAAGACATCAGGAAAACATGCCACACAATTAACCACACAGGGCTAGTGGGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | GCCCCCACTAGCCCTGTGTGGTTAATTGTGTGGCATGTTTTCCTGATGTCTTCAATCAAAGGTATGAGATaGATGTTGGACACTATCACC | + |
Preference number: 5 (lower is better) Translates to: APTSPVWLIVWHVFLMSSIKGMR*MLDTIT Trigger: GGTGATAGTGTCCAACATCAATCTCATACCTTTGAT...TGAAGACATCAGGAAAACATGCCACACAATTAACCACACAGGGCTAGTGGGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | TATGGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGAGATGCACAAGAAGGATaGTTCCACATACGATTGAGA | + |
Preference number: 5 (lower is better) Translates to: YGHLIFDIGAKAIQWGRGDAQEG*FHIRLR Trigger: TCTCAATCGTATGTGGAACAATCCTTCTTGTGCATC...TCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | TATGGTCACTTGATCTTTGACATAGGTGCTAAAGCTATCCAGTGGGGGAGGGGATTGTGGTGGGGACAATaGACAATTGAGTTCTACATT | + |
Preference number: 5 (lower is better) Translates to: YGHLIFDIGAKAIQWGRGLWWGQ*TIEFYI Trigger: AATGTAGAACTCAATTGTCAATTGTCCCCACCACAA...TCCCCTCCCCCACTGGATAGCTTTAGCACCTATGTCAAAGATCAAGTGACCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | CTGAGGAACTACCAGACTGATTTCCAGACAACTCTGGAAATGGAGGAATGTTCTGGTATGAGATTGATGTaGGACACTATCACCACACAC | + |
Preference number: 5 (lower is better) Translates to: LRNYQTDFQTTLEMEECSGMRLM*DTITTH Trigger: GTGTGTGGTGATAGTGTCCAACATCAATCTCATACC...AGAACATTCCTCCATTTCCAGAGTTGTCTGGAAATCAGTCTGGTAGTTCCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | GCCCCCACTAGCCCTGTGTGGTTAATTGTGTGGCATGTTTTCCTGATGTCTTCAGAAATCCTAAAATCATaGAAATATCTGTCAGCCAGC | + |
Preference number: 5 (lower is better) Translates to: APTSPVWLIVWHVFLMSSEILKS*KYLSAS Trigger: GCTGGCTGACAGATATTTCAATGATTTTAGGATTTC...TGAAGACATCAGGAAAACATGCCACACAATTAACCACACAGGGCTAGTGGGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS TCA 90 bp | TTTGCTATTTCTCCATTCCATATGAGGCTGTGGGAACCAACCGCCTaGATGACACTCCAACATCACACCTTTAATATTAGGCGTATGCAT | + |
Preference number: 5 (lower is better) Translates to: FAISPFHMRLWEPTA*MTLQHHTFNIRRMH Trigger: ATGCATACGCCTAATATTAAAGGTGTGATGTTGGAGTGTCATTCAGGCGGTTGGTTCCCACAGCCTCATATGGAATGGAGAAATAGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | CTGAGGAACTACCAGACTGATTTCCAGACAACTCTGGAAATGGAGGAATGTTCTATTGGGGAACGGTCTTaGAATCTAGGTACATGTTCA | + |
Preference number: 5 (lower is better) Translates to: LRNYQTDFQTTLEMEECSIGERS*NLGTCS Trigger: TGAACATGTACCTAGATTCAAAGACCGTTCCCCAAT...AGAACATTCCTCCATTTCCAGAGTTGTCTGGAAATCAGTCTGGTAGTTCCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | CTGAGGAACTACCAGACTGATTTCCAGACAACTCTGGAAATGGAGGAATGTTCTGATGCACAAGAAGGATaGTTCCACATACGATTGAGA | + |
Preference number: 5 (lower is better) Translates to: LRNYQTDFQTTLEMEECSDAQEG*FHIRLR Trigger: TCTCAATCGTATGTGGAACAATCCTTCTTGTGCATC...AGAACATTCCTCCATTTCCAGAGTTGTCTGGAAATCAGTCTGGTAGTTCCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS TCA 90 bp | CATCACACCTTTAATATTAGGCGTATGCATGAGAATCTGTATGTCTaGGCTTGTGGCTGTGACCTTGACCTCTGTGATATGCTCTTCATA | + |
Preference number: 5 (lower is better) Translates to: HHTFNIRRMHENLYV*ACGCDLDLCDMLFI Trigger: TATGAAGAGCATATCACAGAGGTCAAGGTCACAGCCACAAGCTCAGACATACAGATTCTCATGCATACGCCTAATATTAAAGGTGTGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | GGTACAGAGCTAAACAAAATATTCTCAACTGAGGAATACCTAATGGCTAAGAAGCTTGTGGCTGTGACCTaGACCTCTGTGATATGCTCT | + |
Preference number: 5 (lower is better) Translates to: GTELNKIFSTEEYLMAKKLVAVT*TSVICS Trigger: AGAGCATATCACAGAGGTCAAGGTCACAGCCACAAG...CTTCTTAGCCATTAGGTATTCCTCAGTTGAGAATATTTTGTTTAGCTCTGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | CAGGTTCCTGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCTGGATTTGTTTCTGTCAGCCAGCTGTaGTACAAGGAAAATAAGGAA | + |
Preference number: 5 (lower is better) Translates to: QVPVSLNFLESTIVSGFVSVSQL*YKENKE Trigger: TTCCTTATTTTCCTTGTACAACAGCTGGCTGACAGA...AACAAATCCAGACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | ACAGCTATATCAGGTTCCTGTCAGCTTGAACTTCTTGGAATCCACAATAGTGTCTCTGTCAGCCAGCTGTaGTACAAGGAAAATAAGGAA | + |
Preference number: 5 (lower is better) Translates to: TAISGSCQLELLGIHNSVSVSQL*YKENKE Trigger: TTCCTTATTTTCCTTGTACAACAGCTGGCTGACAGA...GACACTATTGTGGATTCCAAGAAGTTCAAGCTGACAGGAACCTGATATAGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106564.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | ATTGTTAAGACTCTCACAAGAAGAACAAGCCTAACAACCACAACATATATTCAGCTTGTGGCTGTGACCTaGACCTCTGTGATATGCTCT | + |
Preference number: 5 (lower is better) Translates to: IVKTLTRRTSLTTTTYIQLVAVT*TSVICS Trigger: AGAGCATATCACAGAGGTCAAGGTCACAGCCACAAG...CTGAATATATGTTGTGGTTGTTAGGCTTGTTCTTCTTGTGAGAGTCTTAACAAT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | CAGAGCAATAGTGATAAAAAGACTACATGGTACTGGTACAGAGACAGGCAAGTATCTGTCAGCCAGCTGTaGTACAAGGAAAATAAGGAA | + |
Preference number: 5 (lower is better) Translates to: QSNSDKKTTWYWYRDRQVSVSQL*YKENKE Trigger: TTCCTTATTTTCCTTGTACAACAGCTGGCTGACAGA...TACTTGCCTGTCTCTGTACCAGTACCATGTAGTCTTTTTATCACTATTGCTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | CTGAGGAACTACCAGACTGATTTCCAGACAACTCTGGAAATGGAGGAATGTTCTGAAATCCTAAAATCATaGAAATATCTGTCAGCCAGC | + |
Preference number: 5 (lower is better) Translates to: LRNYQTDFQTTLEMEECSEILKS*KYLSAS Trigger: GCTGGCTGACAGATATTTCAATGATTTTAGGATTTC...AGAACATTCCTCCATTTCCAGAGTTGTCTGGAAATCAGTCTGGTAGTTCCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | CAGAGCAATAGTGATAAAAAGACTACATGGTACTGGTACAGAGACAGGCAAGTATTGTGGTGGGGACAATaGACAATTGAGTTCTACATT | + |
Preference number: 5 (lower is better) Translates to: QSNSDKKTTWYWYRDRQVLWWGQ*TIEFYI Trigger: AATGTAGAACTCAATTGTCAATTGTCCCCACCACAA...TACTTGCCTGTCTCTGTACCAGTACCATGTAGTCTTTTTATCACTATTGCTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | CAGAGCAATAGTGATAAAAAGACTACATGGTACTGGTACAGAGACAGGCAAGTAATCAAAGGTATGAGATaGATGTTGGACACTATCACC | + |
Preference number: 5 (lower is better) Translates to: QSNSDKKTTWYWYRDRQVIKGMR*MLDTIT Trigger: GGTGATAGTGTCCAACATCAATCTCATACCTTTGAT...TACTTGCCTGTCTCTGTACCAGTACCATGTAGTCTTTTTATCACTATTGCTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | CAACCACAACATATATTCAGAGGTCCCAGTGCAGACTCATTAAGGCTTTATAATATTGGGGAACGGTCTTaGAATCTAGGTACATGTTCA | + |
Preference number: 5 (lower is better) Translates to: QPQHIFRGPSADSLRLYNIGERS*NLGTCS Trigger: TGAACATGTACCTAGATTCAAAGACCGTTCCCCAAT...ATTATAAAGCCTTAATGAGTCTGCACTGGGACCTCTGAATATATGTTGTGGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | CAACCACAACATATATTCAGAGGTCCCAGTGCAGACTCATTAAGGCTTTATAATAGGAATACCACTGCTTaGTTTAATATTGGGGAACGG | + |
Preference number: 5 (lower is better) Translates to: QPQHIFRGPSADSLRLYNRNTTA*FNIGER Trigger: CCGTTCCCCAATATTAAACAAAGCAGTGGTATTCCT...ATTATAAAGCCTTAATGAGTCTGCACTGGGACCTCTGAATATATGTTGTGGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | CAACCACAACATATATTCAGAGGTCCCAGTGCAGACTCATTAAGGCTTTATAATTCTGTCAGCCAGCTGTaGTACAAGGAAAATAAGGAA | + |
Preference number: 5 (lower is better) Translates to: QPQHIFRGPSADSLRLYNSVSQL*YKENKE Trigger: TTCCTTATTTTCCTTGTACAACAGCTGGCTGACAGA...ATTATAAAGCCTTAATGAGTCTGCACTGGGACCTCTGAATATATGTTGTGGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS TCA 90 bp | GCAGATGCACAAGAAGGATTGTTCCACATACGATTGAGAAATAAATaGAATGCAGGAATACCACTGCTTTGTTTAATATTGGGGAACGGT | + |
Preference number: 5 (lower is better) Translates to: ADAQEGLFHIRLRNK*NAGIPLLCLILGNG Trigger: ACCGTTCCCCAATATTAAACAAAGCAGTGGTATTCCTGCATTTCATTTATTTCTCAATCGTATGTGGAACAATCCTTCTTGTGCATCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | ATTGTTAAGACTCTCACAAGAAGAACAAGCCTAACAACCACAACATATATTCAGGGTATGAGATTGATGTaGGACACTATCACCACACAC | + |
Preference number: 5 (lower is better) Translates to: IVKTLTRRTSLTTTTYIQGMRLM*DTITTH Trigger: GTGTGTGGTGATAGTGTCCAACATCAATCTCATACC...CTGAATATATGTTGTGGTTGTTAGGCTTGTTCTTCTTGTGAGAGTCTTAACAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | CAACCACAACATATATTCAGAGGTCCCAGTGCAGACTCATTAAGGCTTTATAATATCAAAGGTATGAGATaGATGTTGGACACTATCACC | + |
Preference number: 5 (lower is better) Translates to: QPQHIFRGPSADSLRLYNIKGMR*MLDTIT Trigger: GGTGATAGTGTCCAACATCAATCTCATACCTTTGAT...ATTATAAAGCCTTAATGAGTCTGCACTGGGACCTCTGAATATATGTTGTGGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | TCTCTGATGACTAAGGATGTTGAACATTTCTTTAGTTGCTTCCAGGATAGCATAATTGGGGAACGGTCTTaGAATCTAGGTACATGTTCA | + |
Preference number: 5 (lower is better) Translates to: SLMTKDVEHFFSCFQDSIIGERS*NLGTCS Trigger: TGAACATGTACCTAGATTCAAAGACCGTTCCCCAAT...TATGCTATCCTGGAAGCAACTAAAGAAATGTTCAACATCCTTAGTCATCAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | GGTACAGAGCTAAACAAAATATTCTCAACTGAGGAATACCTAATGGCTAAGAAGATTGGGGAACGGTCTTaGAATCTAGGTACATGTTCA | + |
Preference number: 5 (lower is better) Translates to: GTELNKIFSTEEYLMAKKIGERS*NLGTCS Trigger: TGAACATGTACCTAGATTCAAAGACCGTTCCCCAAT...CTTCTTAGCCATTAGGTATTCCTCAGTTGAGAATATTTTGTTTAGCTCTGTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | TCTCTGATGACTAAGGATGTTGAACATTTCTTTAGTTGCTTCCAGGATAGCATAGATGCACAAGAAGGATaGTTCCACATACGATTGAGA | + |
Preference number: 5 (lower is better) Translates to: SLMTKDVEHFFSCFQDSIDAQEG*FHIRLR Trigger: TCTCAATCGTATGTGGAACAATCCTTCTTGTGCATC...TATGCTATCCTGGAAGCAACTAAAGAAATGTTCAACATCCTTAGTCATCAGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | CAACCACAACATATATTCAGAGGTCCCAGTGCAGACTCATTAAGGCTTTATAATGAAATCCTAAAATCATaGAAATATCTGTCAGCCAGC | + |
Preference number: 5 (lower is better) Translates to: QPQHIFRGPSADSLRLYNEILKS*KYLSAS Trigger: GCTGGCTGACAGATATTTCAATGATTTTAGGATTTC...ATTATAAAGCCTTAATGAGTCTGCACTGGGACCTCTGAATATATGTTGTGGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS GCA 90 bp | TTGTTTAATATTGGGGAACGGTCTTTGAATCTAGGTACATGTTCATaGAATCTGAAGTATATCAAAGGTATGAGATTGATGTTGGACACT | + |
Preference number: 5 (lower is better) Translates to: LFNIGERSLNLGTCS*NLKYIKGMRLMLDT Trigger: AGTGTCCAACATCAATCTCATACCTTTGATATACTTCAGATTGCATGAACATGTACCTAGATTCAAAGACCGTTCCCCAATATTAAACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS-3UTR CAA 90 bp | ATTGTTAAGACTCTCACAAGAAGAACAAGCCTAACAACCACAACATATATTCAGGAAATCCTAAAATCATaGAAATATCTGTCAGCCAGC | + |
Preference number: 5 (lower is better) Translates to: IVKTLTRRTSLTTTTYIQEILKS*KYLSAS Trigger: GCTGGCTGACAGATATTTCAATGATTTTAGGATTTC...CTGAATATATGTTGTGGTTGTTAGGCTTGTTCTTCTTGTGAGAGTCTTAACAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS CAA 72 bp | ACGGTTCCGAAACCAGCGAATCTCCATGTGTTGTGCTaGTTGTGGTGGGGACAATTGACAATTGAGTTCTAC | + |
Preference number: 6 (lower is better) Translates to: TVPKPANLHVLC*LWWGQLTIEFY Trigger: GTAGAACTCAATTGTCAATTGTCCCCACCACAACAAGCACAACACATGGAGATTCGCTGGTTTCGGAACCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS GCA 72 bp | ATAACGGTTCCGAAACCAGCGAATCTCCATGTGTTGTaGTTGTTGTGGTGGGGACAATTGACAATTGAGTTC | + |
Preference number: 6 (lower is better) Translates to: ITVPKPANLHVL*LLWWGQLTIEF Trigger: GAACTCAATTGTCAATTGTCCCCACCACAACAAGCACAACACATGGAGATTCGCTGGTTTCGGAACCGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS CCA 72 bp | CCGAAACCAGCGAATCTCCATGTGTTGTGCTTGTTGTaGTGGGGACAATTGACAATTGAGTTCTACATTTCC | + |
Preference number: 6 (lower is better) Translates to: PKPANLHVLCLL*WGQLTIEFYIS Trigger: GGAAATGTAGAACTCAATTGTCAATTGTCCCCACCACAACAAGCACAACACATGGAGATTCGCTGGTTTCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS CCA 72 bp | AAACCAGCGAATCTCCATGTGTTGTGCTTGTTGTGGTaGGGACAATTGACAATTGAGTTCTACATTTCCACC | + |
Preference number: 6 (lower is better) Translates to: KPANLHVLCLLW*GQLTIEFYIST Trigger: GGTGGAAATGTAGAACTCAATTGTCAATTGTCCCCACCACAACAAGCACAACACATGGAGATTCGCTGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS CAA 72 bp | GTTCCGAAACCAGCGAATCTCCATGTGTTGTGCTTGTaGTGGTGGGGACAATTGACAATTGAGTTCTACATT | + |
Preference number: 6 (lower is better) Translates to: VPKPANLHVLCL*WWGQLTIEFYI Trigger: AATGTAGAACTCAATTGTCAATTGTCCCCACCACAACAAGCACAACACATGGAGATTCGCTGGTTTCGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS CAA 72 bp | CCAAGGATAATTTCTCTTGTAGCAGGTACCCTCAGATaGATCAGACTCACACTGATCATTGTCCACGGTAGA | + |
Preference number: 6 (lower is better) Translates to: PRIISLVAGTLR*IRLTLIIVHGR Trigger: TCTACCGTGGACAATGATCAGTGTGAGTCTGATCAATCTGAGGGTACCTGCTACAAGAGAAATTATCCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS TCA 72 bp | TCACAGGGTCCTCCAGTTGCTTCTGCTTCCTTCATGTaGATGCACAGTCCAATGCACCACTTTTTATTAAAT | + |
Preference number: 6 (lower is better) Translates to: SQGPPVASASFM*MHSPMHHFLLN Trigger: ATTTAATAAAAAGTGGTGCATTGGACTGTGCATTCACATGAAGGAAGCAGAAGCAACTGGAGGACCCTGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS CCA 72 bp | ATCACTGTAAAGTGTCCTGAACTCAGTGCTACCATCTaGAGGAGGCATAAGACAACACAGTATGAAGTAAGT | + |
Preference number: 6 (lower is better) Translates to: ITVKCPELSATI*RRHKTTQYEVS Trigger: ACTTACTTCATACTGTGTTGTCTTATGCCTCCTCCAGATGGTAGCACTGAGTTCAGGACACTTTACAGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS TCA 72 bp | TTTAATATTAGGCGTATGCATGAGAATCTGTATGTCTaGGCTTGTGGCTGTGACCTTGACCTCTGTGATATG | + |
Preference number: 6 (lower is better) Translates to: FNIRRMHENLYV*ACGCDLDLCDM Trigger: CATATCACAGAGGTCAAGGTCACAGCCACAAGCTCAGACATACAGATTCTCATGCATACGCCTAATATTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS CAA 90 bp | CTAGGTACATGTTCATGCAATCTGAAGTATATCAAAGGTATGAGATaGATGTTGGACACTATCACCACACACAGGATCACACTAATATCT | + |
Preference number: 6 (lower is better) Translates to: LGTCSCNLKYIKGMR*MLDTITTHRITLIS Trigger: AGATATTAGTGTGATCCTGTGTGTGGTGATAGTGTCCAACATCAATCTCATACCTTTGATATACTTCAGATTGCATGAACATGTACCTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS TCA 72 bp | ATGCAAAAAGAGCATGACTCCTATGATTGCAAACACTaGAATTATGGGTACCACTGCAATAATAATCCAAGG | + |
Preference number: 6 (lower is better) Translates to: MQKEHDSYDCKH*NYGYHCNNNPR Trigger: CCTTGGATTATTATTGCAGTGGTACCCATAATTTCAGTGTTTGCAATCATAGGAGTCATGCTCTTTTTGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS GCA 72 bp | ATTGGGGAACGGTCTTTGAATCTAGGTACATGTTCATaGAATCTGAAGTATATCAAAGGTATGAGATTGATG | + |
Preference number: 6 (lower is better) Translates to: IGERSLNLGTCS*NLKYIKGMRLM Trigger: CATCAATCTCATACCTTTGATATACTTCAGATTGCATGAACATGTACCTAGATTCAAAGACCGTTCCCCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS CAA 72 bp | TGCAATCTGAAGTATATCAAAGGTATGAGATTGATGTaGGACACTATCACCACACACAGGATCACACTAATA | + |
Preference number: 6 (lower is better) Translates to: CNLKYIKGMRLM*DTITTHRITLI Trigger: TATTAGTGTGATCCTGTGTGTGGTGATAGTGTCCAACATCAATCTCATACCTTTGATATACTTCAGATTGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS CAA 90 bp | AAATGCAGGAATACCACTGCTTTGTTTAATATTGGGGAACGGTCTTaGAATCTAGGTACATGTTCATGCAATCTGAAGTATATCAAAGGT | + |
Preference number: 6 (lower is better) Translates to: KCRNTTALFNIGERS*NLGTCSCNLKYIKG Trigger: ACCTTTGATATACTTCAGATTGCATGAACATGTACCTAGATTCAAAGACCGTTCCCCAATATTAAACAAAGCAGTGGTATTCCTGCATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS GCA 72 bp | TTCATAGAATTCACCATCTTTAAAGACACAGTGGTATaGACCACCATCATCAACAGTTACATTAAGAATCCT | + |
Preference number: 6 (lower is better) Translates to: FIEFTIFKDTVV*TTIINSYIKNP Trigger: AGGATTCTTAATGTAACTGTTGATGATGGTGGTGCATACCACTGTGTCTTTAAAGATGGTGAATTCTATGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |
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CDS GCA 72 bp | GAATCTGAAATAGAAACTTTGTTACGTAATTGCAGATaGACAAGAAGGATTGTTCCACATACGATTGAGAAA | + |
Preference number: 6 (lower is better) Translates to: ESEIETLLRNCR*TRRIVPHTIEK Trigger: TTTCTCAATCGTATGTGGAACAATCCTTCTTGTGCATCTGCAATTACGTAACAAAGTTTCTATTTCAGATTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069769.9 ENSMUST00000106564.8 ENSMUST00000106565.8 ENSMUST00000106566.2 |