Pregenerated sensors for SKIL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027660Ensembl transcript IDs: ENSMUST00000029194.12, ENSMUST00000117728.8, ENSMUST00000118204.2, ENSMUST00000118470.8, ENSMUST00000123532.2
Found 299 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGAAGATAATGCCAGGGCTGCTTTCAGAAACATCCCTAAAACCTaGACAGGGCCGGTGGTGGCAGAGCTCAGGCCTGTCGACCCAGTA | + |
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Preference number: 1 (lower is better) Translates to: TEDNARAAFRNIPKT*TGPVVAELRPVDPV Trigger: TACTGGGTCGACAGGCCTGAGCTCTGCCACCACCGGCCCTGTGCAGGTTTTAGGGATGTTTCTGAAAGCAGCCCTGGCATTATCTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR TCA 90 bp | GCAGACAGGAACCAGAGACACACAGACTGGGCGCTTCACGGACTCTaGAGGATGTGGAGAGCCTGCAAACACCTCAGTTACTGGTTCACT | + |
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Preference number: 1 (lower is better) Translates to: ADRNQRHTDWALHGL*RMWRACKHLSYWFT Trigger: AGTGAACCAGTAACTGAGGTGTTTGCAGGCTCTCCACATCCTTCAGAGTCCGTGAAGCGCCCAGTCTGTGTGTCTCTGGTTCCTGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR TCA 90 bp | CTCCAAGTTGTTCCTAAGCACAGATCTCAAGTGCATGTAGCGCTATaGGACAGCCCGGGGCACACGCAACAGAAGATAATGCCAGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: LQVVPKHRSQVHVAL*DSPGHTQQKIMPGL Trigger: CAGCCCTGGCATTATCTTCTGTTGCGTGTGCCCCGGGCTGTCTCATAGCGCTACATGCACTTGAGATCTGTGCTTAGGAACAACTTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR TCA 90 bp | GGTATGATAACCCAGGGCTCCGATGTCTTACCGCATGGAGGACAGTaGCAGCCAAACTCCAAGTTGTTCCTAAGCACAGATCTCAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: GMITQGSDVLPHGGQ*QPNSKLFLSTDLKC Trigger: GCACTTGAGATCTGTGCTTAGGAACAACTTGGAGTTTGGCTGTCACTGTCCTCCATGCGGTAAGACATCGGAGCCCTGGGTTATCATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR TCA 90 bp | CAGAACACTTCTGAGTCTGTCAGAAAAATAAATGGTGCGAGTCCTTaGGTGTGCCTCCCACGCAGCCAAGCTGGGGTACAATGGACTGAC | + |
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Preference number: 1 (lower is better) Translates to: QNTSESVRKINGASP*VCLPRSQAGVQWTD Trigger: GTCAGTCCATTGTACCCCAGCTTGGCTGCGTGGGAGGCACACTCAAGGACTCGCACCATTTATTTTTCTGACAGACTCAGAAGTGTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR GCA 90 bp | ATAGTCACTCTTAAACAGAAAGACAAATTACAACTGCTTCTTGTGTaGAGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACAC | + |
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Preference number: 1 (lower is better) Translates to: IVTLKQKDKLQLLLV*SIRAQQRLPLPSTH Trigger: GTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCTGCACACAAGAAGCAGTTGTAATTTGTCTTTCTGTTTAAGAGTGACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| 3UTR GCA 90 bp | CTGGGGTACAATGGACTGACTACTAAGCTAAGGCGGCTTTACAGGTaGCCGTGGCTTCCTCCCTCCAGATCTAAATACAATGACATACAT | + |
|
Preference number: 1 (lower is better) Translates to: LGYNGLTTKLRRLYR*PWLPPSRSKYNDIH Trigger: ATGTATGTCATTGTATTTAGATCTGGAGGGAGGAAGCCACGGGCACCTGTAAAGCCGCCTTAGCTTAGTAGTCAGTCCATTGTACCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR CCA 90 bp | AGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGAGGTaGTACTATCATTCCATCAATCAAATTCCTCTAGGAGGAAACAGA | + |
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Preference number: 1 (lower is better) Translates to: RLPLPSTHTHCLLGR*YYHSINQIPLGGNR Trigger: TCTGTTTCCTCCTAGAGGAATTTGATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| 3UTR CCA 90 bp | TACAATGGACTGACTACTAAGCTAAGGCGGCTTTACAGGTGCCCGTaGCTTCCTCCCTCCAGATCTAAATACAATGACATACATGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: YNGLTTKLRRLYRCP*LPPSRSKYNDIHGP Trigger: GGGACCATGTATGTCATTGTATTTAGATCTGGAGGGAGGAAGCCACGGGCACCTGTAAAGCCGCCTTAGCTTAGTAGTCAGTCCATTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR TCA 90 bp | GCCAAACCTAAGTTGGTAGAATCTTTCGGTGCTCAGTCTCAGCTGTaGTTGGCAGGTGGTTTGTTTAAACTCCTCCTTGATGGCACAGGA | + |
|
Preference number: 1 (lower is better) Translates to: AKPKLVESFGAQSQL*LAGGLFKLLLDGTG Trigger: TCCTGTGCCATCAAGGAGGAGTTTAAACAAACCACCTGCCAATCACAGCTGAGACTGAGCACCGAAAGATTCTACCAACTTAGGTTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR CCA 90 bp | AACATTACCTCTGTATCTAAGCTGAGCCTGAAATATTGCATACCATaGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTAT | + |
|
Preference number: 1 (lower is better) Translates to: NITSVSKLSLKYCIP*TQVLSTTDCSFGKY Trigger: ATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCAATATTTCAGGCTCAGCTTAGATACAGAGGTAATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| 3UTR CCA 90 bp | GTAAGGAAGTTTAGACAGAAAACGATGGCACATCATTTCATCTTCTaGAAAGTGAAGACTACCGCTCAACAATGTCACGAGGCAAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: VRKFRQKTMAHHFIF*KVKTTAQQCHEASF Trigger: GAAACTTGCCTCGTGACATTGTTGAGCGGTAGTCTTCACTTTCCAGAAGATGAAATGATGTGCCATCGTTTTCTGTCTAAACTTCCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCCAGGACCAGCTTTGCAGCTCCTGCTAGGGAAATACCTCGGGCACAGTTCCGCGCTTCACGGACTCTaGAGGATGTGGAGAGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: PPGPALQLLLGKYLGHSSALHGL*RMWRAC Trigger: GCAGGCTCTCCACATCCTTCAGAGTCCGTGAAGCGC...GGAACTGTGCCCGAGGTATTTCCCTAGCAGGAGCTGCAAAGCTGGTCCTGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGCTTCTTGTGTGCAGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACCTGAGCCTGAAATATTaGATACCATGGACACAGGTA | + |
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Preference number: 2 (lower is better) Translates to: TASCVQHQGTAKAAPPLHLSLKY*IPWTQV Trigger: TACCTGTGTCCATGGTATGCAATATTTCAGGCTCAG...GTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCTGCACACAAGAAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| 3UTR-3UTR CCA 90 bp | AGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGAAATATTGCATACCATaGACACAGGTACTCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: SIRAQQRLPLPSTHTHCLKYCIP*TQVLST Trigger: GGTGGAGAGTACCTGTGTCCATGGTATGCAATATTT...CAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| 3UTR CAA 90 bp | AGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTaGTTAGGGAGGTGGTACTATCATTCCATCAATCAAATTCCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: RAQQRLPLPSTHTHC*LGRWYYHSINQIPL Trigger: TAGAGGAATTTGATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCACTGAGCCTGAAATATTaGATACCATGGACACAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: AAPPLHTHTLFVREVVLSLSLKY*IPWTQV Trigger: TACCTGTGTCCATGGTATGCAATATTTCAGGCTCAG...TGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| 3UTR-3UTR GCA 90 bp | TCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATCAACTGAGCCTGAAATATTaGATACCATGGACACAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: STHTHCLLGRWYYHSINQLSLKY*IPWTQV Trigger: TACCTGTGTCCATGGTATGCAATATTTCAGGCTCAG...TTGATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| 3UTR CCA 72 bp | CACACATCCTTCCCTCCTCACTCAGAGCACGGCATGTaGGGCAGGCCTTCCAGAGGGGATGCAGACCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: HTSFPPHSEHGM*GRPSRGDADPQ Trigger: CTGGGGGTCTGCATCCCCTCTGGAAGGCCTGCCCCACATGCCGTGCTCTGAGTGAGGAGGGAAGGATGTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR GCA 72 bp | AATGCCAGGGCTGCTTTCAGAAACATCCCTAAAACCTaGACAGGGCCGGTGGTGGCAGAGCTCAGGCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: NARAAFRNIPKT*TGPVVAELRPV Trigger: GACAGGCCTGAGCTCTGCCACCACCGGCCCTGTGCAGGTTTTAGGGATGTTTCTGAAAGCAGCCCTGGCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR-3UTR CAA 90 bp | GTGCAGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGCCACAGACTGCAGCTTaGGAAAGTATGCAACTGTTA | + |
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Preference number: 3 (lower is better) Translates to: VQHQGTAKAAPPLHTHTLPQTAA*ESMQLL Trigger: TAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGG...CAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| 3UTR-3UTR CAA 90 bp | ACTGCTTCTTGTGTGCAGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACCCACAGACTGCAGCTTaGGAAAGTATGCAACTGTTA | + |
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Preference number: 3 (lower is better) Translates to: TASCVQHQGTAKAAPPLHPQTAA*ESMQLL Trigger: TAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGG...GTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCTGCACACAAGAAGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| 3UTR TCA 72 bp | AACCAGAGACACACAGACTGGGCGCTTCACGGACTCTaGAGGATGTGGAGAGCCTGCAAACACCTCAGTTAC | + |
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Preference number: 3 (lower is better) Translates to: NQRHTDWALHGL*RMWRACKHLSY Trigger: GTAACTGAGGTGTTTGCAGGCTCTCCACATCCTTCAGAGTCCGTGAAGCGCCCAGTCTGTGTGTCTCTGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR-3UTR CAA 90 bp | AGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGCCACAGACTGCAGCTTaGGAAAGTATGCAACTGTTA | + |
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Preference number: 3 (lower is better) Translates to: RAQQRLPLPSTHTHCLLGPQTAA*ESMQLL Trigger: TAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGG...CCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| 3UTR TCA 72 bp | ACCCAGGGCTCCGATGTCTTACCGCATGGAGGACAGTaGCAGCCAAACTCCAAGTTGTTCCTAAGCACAGAT | + |
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Preference number: 3 (lower is better) Translates to: TQGSDVLPHGGQ*QPNSKLFLSTD Trigger: ATCTGTGCTTAGGAACAACTTGGAGTTTGGCTGTCACTGTCCTCCATGCGGTAAGACATCGGAGCCCTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR TCA 72 bp | GTTCCTAAGCACAGATCTCAAGTGCATGTAGCGCTATaGGACAGCCCGGGGCACACGCAACAGAAGATAATG | + |
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Preference number: 3 (lower is better) Translates to: VPKHRSQVHVAL*DSPGHTQQKIM Trigger: CATTATCTTCTGTTGCGTGTGCCCCGGGCTGTCTCATAGCGCTACATGCACTTGAGATCTGTGCTTAGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR TCA 72 bp | TCTGAGTCTGTCAGAAAAATAAATGGTGCGAGTCCTTaGGTGTGCCTCCCACGCAGCCAAGCTGGGGTACAA | + |
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Preference number: 3 (lower is better) Translates to: SESVRKINGASP*VCLPRSQAGVQ Trigger: TTGTACCCCAGCTTGGCTGCGTGGGAGGCACACTCAAGGACTCGCACCATTTATTTTTCTGACAGACTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR GCA 72 bp | TTGATGGCACAGGAGCTTCCACACTTAAGTACTTGGTaGAAAGCCCTCAGTCTGGACCACAGAGAGAGACCA | + |
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Preference number: 3 (lower is better) Translates to: LMAQELPHLSTW*KALSLDHRERP Trigger: TGGTCTCTCTCTGTGGTCCAGACTGAGGGCTTTGCACCAAGTACTTAAGTGTGGAAGCTCCTGTGCCATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR GCA 72 bp | AATGGACTGACTACTAAGCTAAGGCGGCTTTACAGGTaGCCGTGGCTTCCTCCCTCCAGATCTAAATACAAT | + |
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Preference number: 3 (lower is better) Translates to: NGLTTKLRRLYR*PWLPPSRSKYN Trigger: ATTGTATTTAGATCTGGAGGGAGGAAGCCACGGGCACCTGTAAAGCCGCCTTAGCTTAGTAGTCAGTCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR CCA 72 bp | CTGACTACTAAGCTAAGGCGGCTTTACAGGTGCCCGTaGCTTCCTCCCTCCAGATCTAAATACAATGACATA | + |
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Preference number: 3 (lower is better) Translates to: LTTKLRRLYRCP*LPPSRSKYNDI Trigger: TATGTCATTGTATTTAGATCTGGAGGGAGGAAGCCACGGGCACCTGTAAAGCCGCCTTAGCTTAGTAGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR-3UTR CAA 90 bp | CCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAAGCTGAGCCTGAAATATaGCATACCATGGACACAGGT | + |
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Preference number: 3 (lower is better) Translates to: PLHTHTLFVREVVLSFHQAEPEI*HTMDTG Trigger: ACCTGTGTCCATGGTATGCAATATTTCAGGCTCAGC...TTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| 3UTR CCA 72 bp | CTCCCCTCCACACACACACACTGTTTGTTAGGGAGGTaGTACTATCATTCCATCAATCAAATTCCTCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: LPSTHTHCLLGR*YYHSINQIPLG Trigger: TCCTAGAGGAATTTGATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| 3UTR-3UTR CAA 90 bp | TCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATCAAGCTGAGCCTGAAATATaGCATACCATGGACACAGGT | + |
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Preference number: 3 (lower is better) Translates to: STHTHCLLGRWYYHSINQAEPEI*HTMDTG Trigger: ACCTGTGTCCATGGTATGCAATATTTCAGGCTCAGC...TTGATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| 3UTR GCA 72 bp | AACATTACCTCTGTATCTAAGCTGAGCCTGAAATATTaGATACCATGGACACAGGTACTCTCCACCACAGAC | + |
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Preference number: 3 (lower is better) Translates to: NITSVSKLSLKY*IPWTQVLSTTD Trigger: GTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCAATATTTCAGGCTCAGCTTAGATACAGAGGTAATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| 3UTR TCA 72 bp | TTCCCTAGCAAATTTCAAGCCAAGCATCTGCTAATGTaGAATTCGGTGATAAAAACATCAGACTTTATGTGC | + |
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Preference number: 3 (lower is better) Translates to: FPSKFQAKHLLM*NSVIKTSDFMC Trigger: GCACATAAAGTCTGATGTTTTTATCACCGAATTTCACATTAGCAGATGCTTGGCTTGAAATTTGCTAGGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| 3UTR CCA 72 bp | AGAGGTCACTTGTGGGGTATTACAGAATGTCAAAGGTaGTTTTCAAGCTATATGATGCAATGTAAATTAAAG | + |
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Preference number: 3 (lower is better) Translates to: RGHLWGITECQR*FSSYMMQCKLK Trigger: CTTTAATTTACATTGCATCATATAGCTTGAAAACCACCTTTGACATTCTGTAATACCCCACAAGTGACCTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | GTGCAGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGATCTGTGCGAATGCATaGCGAACGTCTGGGGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: VQHQGTAKAAPPLHTHTLICANA*RTSGEQ Trigger: TTGCTCCCCAGACGTTCGTCATGCATTCGCACAGAT...CAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | GTGTGCAGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACATCTGTGCGAATGCATaGCGAACGTCTGGGGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: VCSIRAQQRLPLPSTHTHICANA*RTSGEQ Trigger: TTGCTCCCCAGACGTTCGTCATGCATTCGCACAGAT...GTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCTGCACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | CCCCCAGGACCAGCTTTGCAGCTCCTGCTAGGGAAATACCTCGGGCACAGTTCCCCTCCCGCTCCTGTCTaGGTTCATCTTGGAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: PPGPALQLLLGKYLGHSSPPAPV*VHLGVP Trigger: AGGAACTCCAAGATGAACTCAGACAGGAGCGGGAGG...GGAACTGTGCCCGAGGTATTTCCCTAGCAGGAGCTGCAAAGCTGGTCCTGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| CDS-3UTR CCA 90 bp | GTGTGCAGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTCTGAGTTCATCTTaGAGTTCCTGCCTGTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: VCSIRAQQRLPLPSTHTHCLSSS*SSCLSA Trigger: GGCCGACAGGCAGGAACTCCAAGATGAACTCAGACA...GTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCTGCACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | GTGTGCAGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACAGCTGCTGCTTCCTCTaGAGAATGGAGTTCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VCSIRAQQRLPLPSTHTHSCCFL*RMEFSF Trigger: GAAGCTGAACTCCATTCTGCAGAGGAAGCAGCAGCT...GTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCTGCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | GTGCAGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGAGCTGCTGCTTCCTCTaGAGAATGGAGTTCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VQHQGTAKAAPPLHTHTLSCCFL*RMEFSF Trigger: GAAGCTGAACTCCATTCTGCAGAGGAAGCAGCAGCT...CAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | AGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGGGCGCAAAGAGACCCTaGCATTTGCCCAAGCATTCA | + |
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Preference number: 4 (lower is better) Translates to: RAQQRLPLPSTHTHCLLGGAKRP*HLPKHS Trigger: TGAATGCTTGGGCAAATGTCAGGGTCTCTTTGCGCC...CCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | CCCCCAGGACCAGCTTTGCAGCTCCTGCTAGGGAAATACCTCGGGCACAGTTCCGTCCTTCTCCAAGGTTaGGTCACAGGTGCATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPGPALQLLLGKYLGHSSVLLQG*VTGAFL Trigger: CAGAAATGCACCTGTGACTCAACCTTGGAGAAGGAC...GGAACTGTGCCCGAGGTATTTCCCTAGCAGGAGCTGCAAAGCTGGTCCTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTCCATCTGCAGCTGCTaGTTCCTCTGCAGAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QQRLPLPSTHTHCLLGRWSICSC*FLCRME Trigger: CTCCATTCTGCAGAGGAAGCAGCAGCTGCAGATGGA...CCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGTCACAGGTGCATTTCTaGTGCATCACCTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RAQQRLPLPSTHTHCLLGSQVHF*CITCSS Trigger: GCTGGAGCAGGTGATGCAGCAGAAATGCACCTGTGA...CCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | AGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTCTTTGCCTCAGTTCTaGCAGCTGAGCCGCATACTC | + |
|
Preference number: 4 (lower is better) Translates to: SIRAQQRLPLPSTHTHCLSLPQF*QLSRIL Trigger: GAGTATGCGGCTCAGCTGGCAGAACTGAGGCAAAGA...CAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCAGGACCAGCTTTGCAGCTCCTGCTAGGGAAATACCTCGGGCACAGTTCCAGCAGAAAATGCTGCTaGTCCACCCAAAGAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPGPALQLLLGKYLGHSSSRKCC*STQRAL Trigger: CAGAGCTCTTTGGGTGGACCAGCAGCATTTTCTGCT...GGAACTGTGCCCGAGGTATTTCCCTAGCAGGAGCTGCAAAGCTGGTCCTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGCAGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACGTTTATCTGCTGGAGTaGAAATTCTCGGAGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VCSIRAQQRLPLPSTHTHVYLLE*KFSEDR Trigger: TCTGTCCTCCGAGAATTTTCACTCCAGCAGATAAAC...GTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCTGCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | GTGCAGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTCTGTAGATTCTGCTaGTCTTCAGTGAGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQHQGTAKAAPPLHTHTLFCRFC*SSVSSF Trigger: GAAGGAGCTCACTGAAGAGCAGCAGAATCTACAGAA...CAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | AGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGCAGGTGCATTTCTGCTaGATCACCTGCTCCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SIRAQQRLPLPSTHTHCLQVHFC*ITCSSF Trigger: AAAGCTGGAGCAGGTGATGCAGCAGAAATGCACCTG...CAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | CCCCCAGGACCAGCTTTGCAGCTCCTGCTAGGGAAATACCTCGGGCACAGTTCCGACGACTTGCCAATCTaGAGCTTCAGCTCCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: PPGPALQLLLGKYLGHSSDDLPI*SFSSFI Trigger: GATAAAGGAGCTGAAGCTGCAGATTGGCAAGTCGTC...GGAACTGTGCCCGAGGTATTTCCCTAGCAGGAGCTGCAAAGCTGGTCCTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCAGTGGCCTCTTTAGACTaGGACGCAGCAGATGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAPPLHTHTLFVREVVLSVASLD*DAADVS Trigger: GCTCACATCTGCTGCGTCCCAGTCTAAAGAGGCCAC...TGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGGCTTCCTCTGCAGAATaGAGTTCAGCTTCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAQQRLPLPSTHTHCLLGASSAE*SSASPA Trigger: AGCAGGAGAAGCTGAACTCCATTCTGCAGAGGAAGC...CCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGGCTTCCTCTGCAGAATaGAGTTCAGCTTCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQRLPLPSTHTHCLLGRWASSAE*SSASPA Trigger: AGCAGGAGAAGCTGAACTCCATTCTGCAGAGGAAGC...CCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAACTCAGTTCTGCCAGCTaGGCCGCATACTCGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLHTHTLFVREVVLSFHQLSSAS*AAYSAS Trigger: GGAGGCCGAGTATGCGGCTCAGCTGGCAGAACTGAG...TTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTCAGTTCTGCCAGCTaGGCCGCATACTCGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YHGHRYSPPQTAALESMQLSSAS*AAYSAS Trigger: GGAGGCCGAGTATGCGGCTCAGCTGGCAGAACTGAG...TTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATCCATCTGCAGCTGCTaGTTCCTCTGCAGAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AAPPLHTHTLFVREVVLSSICSC*FLCRME Trigger: CTCCATTCTGCAGAGGAAGCAGCAGCTGCAGATGGA...TGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGGACGACTTGCCAATCTaGAGCTTCAGCTCCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: QQRLPLPSTHTHCLLGRWDDLPI*SFSSFI Trigger: GATAAAGGAGCTGAAGCTGCAGATTGGCAAGTCGTC...CCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCTTCTTGTGTGCAGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACGATCAGCCCACAGGATaGAGCATTAAATGGGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TASCVQHQGTAKAAPPLHDQPTG*SIKWEY Trigger: ATACTCCCATTTAATGCTCCATCCTGTGGGCTGATC...GTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCTGCACACAAGAAGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGCAGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACCATACTGTGTTTATCTaGTGGAGTGAAAATTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VCSIRAQQRLPLPSTHTHHTVFI*WSENSR Trigger: CCGAGAATTTTCACTCCAGCAGATAAACACAGTATG...GTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCTGCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGAGAGACCCTGACATTTaGCCAAGCATTCATGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QQRLPLPSTHTHCLLGRWRDPDI*PSIHVP Trigger: TGGAACATGAATGCTTGGGCAAATGTCAGGGTCTCT...CCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTTCTGTAGATTCTGCTaGTCTTCAGTGAGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQRLPLPSTHTHCLLGRWFCRFC*SSVSSF Trigger: GAAGGAGCTCACTGAAGAGCAGCAGAATCTACAGAA...CCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | AGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGGGTGACATGCTCTCCTaGGAATATCGAGCAGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SIRAQQRLPLPSTHTHCLGDMLS*EYRAEN Trigger: ATTTTCTGCTCGATATTCCCAGGAGAGCATGTCACC...CAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| 3UTR CAA 72 bp | CTCCTTGATGGCACAGGAGCTTCCACACTTAAGTACTaGGTGCAAAGCCCTCAGTCTGGACCACAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLDGTGASTLKY*VQSPQSGPQRE Trigger: CTCTCTCTGTGGTCCAGACTGAGGGCTTTGCACCAAGTACTTAAGTGTGGAAGCTCCTGTGCCATCAAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | AGCTGTGATTGGCAGGTGGTTTGTTTAAACTCCTCCTTGATGGCACAGGAGCTTGTGCATCGGTCAACGTaGTCAGCCCACAGGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SCDWQVVCLNSSLMAQELVHRST*SAHRME Trigger: CTCCATCCTGTGGGCTGATCACGTTGACCGATGCAC...AAGCTCCTGTGCCATCAAGGAGGAGTTTAAACAAACCACCTGCCAATCACAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAAGTGCATCGGTCAACGTaGTCAGCCCACAGGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YHGHRYSPPQTAALESMQVHRST*SAHRME Trigger: CTCCATCCTGTGGGCTGATCACGTTGACCGATGCAC...TTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCGACAAACACAAAGCCCTGTCAACCACACACAGGTGTGTCTTCTTCAGCTGGGGATCTGTGCGAATaGATGACGAACGTCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QATNTKPCQPHTGVSSSAGDLCE*MTNVWG Trigger: TCCCCAGACGTTCGTCATGCATTCGCACAGATCCCC...AGCTGAAGAAGACACACCTGTGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCGACAAACACAAAGCCCTGTCAACCACACACAGGTGTGTCTTCTTCAGCTGTGGCCTCTTTAGACTaGGACGCAGCAGATGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QATNTKPCQPHTGVSSSAVASLD*DAADVS Trigger: GCTCACATCTGCTGCGTCCCAGTCTAAAGAGGCCAC...AGCTGAAGAAGACACACCTGTGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCAGTTTATCTGCTGGAGTaGAAATTCTCGGAGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: AAPPLHTHTLFVREVVLSVYLLE*KFSEDR Trigger: TCTGTCCTCCGAGAATTTTCACTCCAGCAGATAAAC...TGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATACAGTGCCACTTGGCTaGCTCAAAGCCCCAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CIPWTQVLSTTDCSFGKYTVPLG*LKAPMA Trigger: TGCCATTGGGGCTTTGAGTCAGCCAAGTGGCACTGT...ATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TATTGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGACAGTGCCACTTGGCTaGCTCAAAGCCCCAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YCIPWTQVLSTTDCSFGKTVPLG*LKAPMA Trigger: TGCCATTGGGGCTTTGAGTCAGCCAAGTGGCACTGT...CTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCGACAAACACAAAGCCCTGTCAACCACACACAGGTGTGTCTTCTTCAGCTTCTGCTGCTCTTCAGTaGGCTCCTTCATCGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QATNTKPCQPHTGVSSSASAALQ*APSSPL Trigger: CAAAGGCGATGAAGGAGCTCACTGAAGAGCAGCAGA...AGCTGAAGAAGACACACCTGTGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCAATATCGAGCAGAAAATaGTGCTGGTCCACCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AAPPLHTHTLFVREVVLSISSRK*CWSTQR Trigger: TCTTTGGGTGGACCAGCAGCATTTTCTGCTCGATAT...TGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCAAGAGACCCTGACATTTaGCCAAGCATTCATGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AAPPLHTHTLFVREVVLSRDPDI*PSIHVP Trigger: TGGAACATGAATGCTTGGGCAAATGTCAGGGTCTCT...TGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | CCAAAGCCAACCTTACGAGAGCAACCAGCACACAGAATGAGCATGCACGAAGTATCTTTGCCTCAGTTCTaGCAGCTGAGCCGCATACTC | + |
|
Preference number: 4 (lower is better) Translates to: PKPTLREQPAHRMSMHEVSLPQF*QLSRIL Trigger: GAGTATGCGGCTCAGCTGGCAGAACTGAGGCAAAGA...TACTTCGTGCATGCTCATTCTGTGTGCTGGTTGCTCTCGTAAGGTTGGCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATCATCTTGGAGTTCCTaGCTGTCGGCCTCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PLHTHTLFVREVVLSFHQSSWSS*LSASAW Trigger: CCATGCTGAGGCCGACAGGCAGGAACTCCAAGATGA...TTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | TGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTTCATCTTGGAGTTCCTaGCTGTCGGCCTCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: WTQVLSTTDCSFGKYATVSSWSS*LSASAW Trigger: CCATGCTGAGGCCGACAGGCAGGAACTCCAAGATGA...AACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGTGTACAGGTAGTAGCTaGGGTGTAAAAATGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RAQQRLPLPSTHTHCLLGCTGSS*GVKMNV Trigger: CACATTCATTTTTACACCCCAGCTACTACCTGTACA...CCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | TACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAAGTGGCCTCTTTAGACTaGGACGCAGCAGATGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YHGHRYSPPQTAALESMQVASLD*DAADVS Trigger: GCTCACATCTGCTGCGTCCCAGTCTAAAGAGGCCAC...TTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | ATGGTCTCATTCCTCCCTAAACAGAGTATGGACTCTGAAGGAAAATCTGCTTGCGTGCATCGGTCAACGTaGTCAGCCCACAGGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MVSFLPKQSMDSEGKSACVHRST*SAHRME Trigger: CTCCATCCTGTGGGCTGATCACGTTGACCGATGCAC...GCAAGCAGATTTTCCTTCAGAGTCCATACTCTGTTTAGGGAGGAATGAGACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAAGGCGCAAAGAGACCCTaGCATTTGCCCAAGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: YHGHRYSPPQTAALESMQGAKRP*HLPKHS Trigger: TGAATGCTTGGGCAAATGTCAGGGTCTCTTTGCGCC...TTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TATTGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGGGCGCAAAGAGACCCTaGCATTTGCCCAAGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: YCIPWTQVLSTTDCSFGKGAKRP*HLPKHS Trigger: TGAATGCTTGGGCAAATGTCAGGGTCTCTTTGCGCC...CTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAAATCTGTGCGAATGCATaGCGAACGTCTGGGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YHGHRYSPPQTAALESMQICANA*RTSGEQ Trigger: TTGCTCCCCAGACGTTCGTCATGCATTCGCACAGAT...TTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAAATCTGTGCGAATGCATaGCGAACGTCTGGGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLHTHTLFVREVVLSFHQICANA*RTSGEQ Trigger: TTGCTCCCCAGACGTTCGTCATGCATTCGCACAGAT...TTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTTCTGCTGCTCTTCAGTaGGCTCCTTCATCGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: WTQVLSTTDCSFGKYATVSAALQ*APSSPL Trigger: CAAAGGCGATGAAGGAGCTCACTGAAGAGCAGCAGA...AACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAATCTGCTGCTCTTCAGTaGGCTCCTTCATCGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YHGHRYSPPQTAALESMQSAALQ*APSSPL Trigger: CAAAGGCGATGAAGGAGCTCACTGAAGAGCAGCAGA...TTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCGACAAACACAAAGCCCTGTCAACCACACACAGGTGTGTCTTCTTCAGCTGTCCTTCTCCAAGGTTaGGTCACAGGTGCATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QATNTKPCQPHTGVSSSAVLLQG*VTGAFL Trigger: CAGAAATGCACCTGTGACTCAACCTTGGAGAAGGAC...AGCTGAAGAAGACACACCTGTGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATGGGGATCTGTGCGAATaGATGACGAACGTCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSTHTHCLLGRWYYHSINGDLCE*MTNVWG Trigger: TCCCCAGACGTTCGTCATGCATTCGCACAGATCCCC...ATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGATTGGCAGGTGGTTTGTTTAAACTCCTCCTTGATGGCACAGGAGCTTTCCATCTGCAGCTGCTaGTTCCTCTGCAGAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SCDWQVVCLNSSLMAQELSICSC*FLCRME Trigger: CTCCATTCTGCAGAGGAAGCAGCAGCTGCAGATGGA...AAGCTCCTGTGCCATCAAGGAGGAGTTTAAACAAACCACCTGCCAATCACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | TGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATTCCATCTGCAGCTGCTaGTTCCTCTGCAGAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CIPWTQVLSTTDCSFGKYSICSC*FLCRME Trigger: CTCCATTCTGCAGAGGAAGCAGCAGCTGCAGATGGA...ATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | TGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTACCTCCATCTGCAGCTaGTGCTTCCTCTGCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: WTQVLSTTDCSFGKYATVTSICS*CFLCRM Trigger: CATTCTGCAGAGGAAGCAGCAGCTGCAGATGGAGGT...AACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | AGCTGTGATTGGCAGGTGGTTTGTTTAAACTCCTCCTTGATGGCACAGGAGCTTACCTCCATCTGCAGCTaGTGCTTCCTCTGCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SCDWQVVCLNSSLMAQELTSICS*CFLCRM Trigger: CATTCTGCAGAGGAAGCAGCAGCTGCAGATGGAGGT...AAGCTCCTGTGCCATCAAGGAGGAGTTTAAACAAACCACCTGCCAATCACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCGACAAACACAAAGCCCTGTCAACCACACACAGGTGTGTCTTCTTCAGCTCAGGTGCATTTCTGCTaGATCACCTGCTCCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QATNTKPCQPHTGVSSSAQVHFC*ITCSSF Trigger: AAAGCTGGAGCAGGTGATGCAGCAGAAATGCACCTG...AGCTGAAGAAGACACACCTGTGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | GGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTATCACAGGTGCATTTCTaGTGCATCACCTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHRYSPPQTAALESMQLLSQVHF*CITCSS Trigger: GCTGGAGCAGGTGATGCAGCAGAAATGCACCTGTGA...TAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | ATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCATCTTTGCCTCAGTTCTaGCAGCTGAGCCGCATACTC | + |
|
Preference number: 4 (lower is better) Translates to: IPWTQVLSTTDCSFGKYASLPQF*QLSRIL Trigger: GAGTATGCGGCTCAGCTGGCAGAACTGAGGCAAAGA...TGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | TATTGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTCTTTGCCTCAGTTCTaGCAGCTGAGCCGCATACTC | + |
|
Preference number: 4 (lower is better) Translates to: YCIPWTQVLSTTDCSFGKSLPQF*QLSRIL Trigger: GAGTATGCGGCTCAGCTGGCAGAACTGAGGCAAAGA...CTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCGACAAACACAAAGCCCTGTCAACCACACACAGGTGTGTCTTCTTCAGCTGGTAACAGTGCCACTTaGCTGACTCAAAGCCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QATNTKPCQPHTGVSSSAGNSAT*LTQSPN Trigger: ATTGGGGCTTTGAGTCAGCCAAGTGGCACTGTTACC...AGCTGAAGAAGACACACCTGTGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCAGCTTTTCTGACTGTTTaGAGGTGGACTTACTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAPPLHTHTLFVREVVLSAFLTV*RWTYLS Trigger: AGACAAGTAAGTCCACCTCCAAACAGTCAGAAAAGC...TGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029194.12 |
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| CDS-3UTR CCA 90 bp | CCAAAGCCAACCTTACGAGAGCAACCAGCACACAGAATGAGCATGCACGAAGTAGCTTCCTCTGCAGAATaGAGTTCAGCTTCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKPTLREQPAHRMSMHEVASSAE*SSASPA Trigger: AGCAGGAGAAGCTGAACTCCATTCTGCAGAGGAAGC...TACTTCGTGCATGCTCATTCTGTGTGCTGGTTGCTCTCGTAAGGTTGGCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | GGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTACTGTCGGCCTCAGCATaGTCTAGTCTTTGCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GHRYSPPQTAALESMQLLLSASA*SSLCLS Trigger: ACTGAGGCAAAGACTAGACCATGCTGAGGCCGACAG...TAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | ATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCATGTCTGAGTTCATCTTaGAGTTCCTGCCTGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IPWTQVLSTTDCSFGKYACLSSS*SSCLSA Trigger: GGCCGACAGGCAGGAACTCCAAGATGAACTCAGACA...TGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | GGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTATGTCTGAGTTCATCTTaGAGTTCCTGCCTGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GHRYSPPQTAALESMQLLCLSSS*SSCLSA Trigger: GGCCGACAGGCAGGAACTCCAAGATGAACTCAGACA...TAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| 3UTR CAA 72 bp | CAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTaGTTAGGGAGGTGGTACTATCATTCCATCAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: QRLPLPSTHTHC*LGRWYYHSINQ Trigger: TTGATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | AGCTGTGATTGGCAGGTGGTTTGTTTAAACTCCTCCTTGATGGCACAGGAGCTTAGCTATCAGAAGGAATaGGAAGAGGGCCGGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCDWQVVCLNSSLMAQELSYQKE*EEGREE Trigger: TTCTTCCCGGCCCTCTTCTCATTCCTTCTGATAGCT...AAGCTCCTGTGCCATCAAGGAGGAGTTTAAACAAACCACCTGCCAATCACAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | TATTGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGCCTTCCAAAAGAGTCTaGGTGAGCTCTGTGGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: YCIPWTQVLSTTDCSFGKPSKRV*VSSVEL Trigger: TAGCTCCACAGAGCTCACTCAGACTCTTTTGGAAGG...CTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAACCTTCCAAAAGAGTCTaGGTGAGCTCTGTGGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PLHTHTLFVREVVLSFHQPSKRV*VSSVEL Trigger: TAGCTCCACAGAGCTCACTCAGACTCTTTTGGAAGG...TTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | CAAGCGACAAACACAAAGCCCTGTCAACCACACACAGGTGTGTCTTCTTCAGCTAATTCCTCCATCCTCTaGGCATGCTCACTCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QATNTKPCQPHTGVSSSANSSIL*ACSLCN Trigger: GTTACAGAGTGAGCATGCTCAGAGGATGGAGGAATT...AGCTGAAGAAGACACACCTGTGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAAGTCCTTCTCCAAGGTTaGGTCACAGGTGCATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLHTHTLFVREVVLSFHQVLLQG*VTGAFL Trigger: CAGAAATGCACCTGTGACTCAACCTTGGAGAAGGAC...TTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | ATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCATCGAGCAGAAAATGCTaGTGGTCCACCCAAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPWTQVLSTTDCSFGKYASSRKC*WSTQRA Trigger: AGCTCTTTGGGTGGACCAGCAGCATTTTCTGCTCGA...TGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | TGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGCTGCTGCTTCCTCTaGAGAATGGAGTTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WTQVLSTTDCSFGKYATVSCCFL*RMEFSF Trigger: GAAGCTGAACTCCATTCTGCAGAGGAAGCAGCAGCT...AACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | TGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATAGCTGCTGCTTCCTCTaGAGAATGGAGTTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CIPWTQVLSTTDCSFGKYSCCFL*RMEFSF Trigger: GAAGCTGAACTCCATTCTGCAGAGGAAGCAGCAGCT...ATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTTCATCTTGGAGTTCCTaGCTGTCGGCCTCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTTDCSFGKYATVRNTGSSWSS*LSASAW Trigger: CCATGCTGAGGCCGACAGGCAGGAACTCCAAGATGA...ACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGGCGTGTGTTTCAGACTaGGGTTTAAATTTAAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQRLPLPSTHTHCLLGRWACVSD*GLNLKF Trigger: AAACTTTAAATTTAAACCCCAGTCTGAAACACACGC...CCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | GGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAAGCAGAAAATGCTGCTaGTCCACCCAAAGAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GHRYSPPQTAALESMQLLSRKCC*STQRAL Trigger: CAGAGCTCTTTGGGTGGACCAGCAGCATTTTCTGCT...TAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCGACAAACACAAAGCCCTGTCAACCACACACAGGTGTGTCTTCTTCAGCTCCAGTTTCCTTCAACTaGGCCAGAGAGCTTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QATNTKPCQPHTGVSSSAPVSFN*ARELLA Trigger: TGCTAAAAGCTCTCTGGCCCAGTTGAAGGAAACTGG...AGCTGAAGAAGACACACCTGTGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | TGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTTGCATGACGAACGTCTaGGGAGCAAACATTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WTQVLSTTDCSFGKYATVCMTNV*GANIPQ Trigger: CTGTGGAATGTTTGCTCCCCAGACGTTCGTCATGCA...AACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | TATTGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGGGTAACAGTGCCACTTaGCTGACTCAAAGCCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YCIPWTQVLSTTDCSFGKGNSAT*LTQSPN Trigger: ATTGGGGCTTTGAGTCAGCCAAGTGGCACTGTTACC...CTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATTGTCTGAGTTCATCTTaGAGTTCCTGCCTGTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSTHTHCLLGRWYYHSINCLSSS*SSCLSA Trigger: GGCCGACAGGCAGGAACTCCAAGATGAACTCAGACA...ATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGTATGCTACCATTTTaGGGAAAAGTTCGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: WTQVLSTTDCSFGKYATVSMLPF*GKVRGR Trigger: GCGGCCACGAACTTTTCCTCAAAATGGTAGCATACT...AACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAAAATTCCTCCATCCTCTaGGCATGCTCACTCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YHGHRYSPPQTAALESMQNSSIL*ACSLCN Trigger: GTTACAGAGTGAGCATGCTCAGAGGATGGAGGAATT...TTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATGTCCTTCTCCAAGGTTaGGTCACAGGTGCATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSTHTHCLLGRWYYHSINVLLQG*VTGAFL Trigger: CAGAAATGCACCTGTGACTCAACCTTGGAGAAGGAC...ATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATCAACCTCCCGCTCCTGTCTaGGTTCATCTTGGAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STHTHCLLGRWYYHSINQPPAPV*VHLGVP Trigger: AGGAACTCCAAGATGAACTCAGACAGGAGCGGGAGG...TTGATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATTCGAGCAGAAAATGCTaGTGGTCCACCCAAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSTHTHCLLGRWYYHSINSSRKC*WSTQRA Trigger: AGCTCTTTGGGTGGACCAGCAGCATTTTCTGCTCGA...ATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | GGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAAATCACGCTTGCTTGTaGCTCTCACTAAGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GHRYSPPQTAALESMQLLNHACL*LSLSCT Trigger: TGTGCAGCTTAGTGAGAGGCACAAGCAAGCGTGATT...TAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | TGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTCTTCTGAATCACGCTTaGTTGTGCCTCTCACTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WTQVLSTTDCSFGKYATVLLNHA*LCLSLS Trigger: GCTTAGTGAGAGGCACAAGCAAGCGTGATTCAGAAG...AACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | CCAAAGCCAACCTTACGAGAGCAACCAGCACACAGAATGAGCATGCACGAAGTATCTTTCTGTAGATTCTaGTGCTCTTCAGTGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKPTLREQPAHRMSMHEVSFCRF*CSSVSS Trigger: GGAGCTCACTGAAGAGCAGCAGAATCTACAGAAAGA...TACTTCGTGCATGCTCATTCTGTGTGCTGGTTGCTCTCGTAAGGTTGGCTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | CAAGCGACAAACACAAAGCCCTGTCAACCACACACAGGTGTGTCTTCTTCAGCTTTCTGCTGCATCACCTaGTCCAGCTTTTTCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: QATNTKPCQPHTGVSSSAFCCIT*SSFFSK Trigger: CTTAGAGAAAAAGCTGGAGCAGGTGATGCAGCAGAA...AGCTGAAGAAGACACACCTGTGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | AGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATATCATCTTGGAGTTCCTaGCTGTCGGCCTCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RYSPPQTAALESMQLLEISSWSS*LSASAW Trigger: CCATGCTGAGGCCGACAGGCAGGAACTCCAAGATGA...TATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTGATTGGCAGGTGGTTTGTTTAAACTCCTCCTTGATGGCACAGGAGCTTGACGACTTGCCAATCTaGAGCTTCAGCTCCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: SCDWQVVCLNSSLMAQELDDLPI*SFSSFI Trigger: GATAAAGGAGCTGAAGCTGCAGATTGGCAAGTCGTC...AAGCTCCTGTGCCATCAAGGAGGAGTTTAAACAAACCACCTGCCAATCACAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| CDS-3UTR CCA 90 bp | TGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATCCAGTTTCCTTCAACTaGGCCAGAGAGCTTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CIPWTQVLSTTDCSFGKYPVSFN*ARELLA Trigger: TGCTAAAAGCTCTCTGGCCCAGTTGAAGGAAACTGG...ATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | TATTGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGCCAGTTTCCTTCAACTaGGCCAGAGAGCTTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YCIPWTQVLSTTDCSFGKPVSFN*ARELLA Trigger: TGCTAAAAGCTCTCTGGCCCAGTTGAAGGAAACTGG...CTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR CCA 90 bp | AGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATAGTGGCCTCTTTAGACTaGGACGCAGCAGATGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RYSPPQTAALESMQLLEIVASLD*DAADVS Trigger: GCTCACATCTGCTGCGTCCCAGTCTAAAGAGGCCAC...TATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | CTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTCCTTCCAAAAGAGTCTaGGTGAGCTCTGTGGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LSTTDCSFGKYATVRNTGPSKRV*VSSVEL Trigger: TAGCTCCACAGAGCTCACTCAGACTCTTTTGGAAGG...ACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGTTTATCTGCTGGAGTaGAAATTCTCGGAGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CIPWTQVLSTTDCSFGKYVYLLE*KFSEDR Trigger: TCTGTCCTCCGAGAATTTTCACTCCAGCAGATAAAC...ATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TTAGAATTCAATTTTCAAAGCAAGCGACAAACACAAAGCCCTGTCAACCACACAGTGCATCGGTCAACGTaGTCAGCCCACAGGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LEFNFQSKRQTQSPVNHTVHRST*SAHRME Trigger: CTCCATCCTGTGGGCTGATCACGTTGACCGATGCAC...TGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTGCTTTGAAAATTGAATTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | TCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTATCTGCTGCTCTTCAGTaGGCTCCTTCATCGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPQTAALESMQLLEIQVSAALQ*APSSPL Trigger: CAAAGGCGATGAAGGAGCTCACTGAAGAGCAGCAGA...TACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | TACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACCAAAGAGCTCTGACTaGTTAAGTGGAATTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YHGHRYSPPQTAALESMQPKSSD*LSGIVP Trigger: TGGCACAATTCCACTTAAGCAGTCAGAGCTCTTTGG...TTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | TACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAAAGAGACCCTGACATTTaGCCAAGCATTCATGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YHGHRYSPPQTAALESMQRDPDI*PSIHVP Trigger: TGGAACATGAATGCTTGGGCAAATGTCAGGGTCTCT...TTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | CCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATAATCACGCTTGCTTGTaGCTCTCACTAAGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PSTHTHCLLGRWYYHSINNHACL*LSLSCT Trigger: TGTGCAGCTTAGTGAGAGGCACAAGCAAGCGTGATT...ATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | AGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATAACCTCCATCTGCAGCTaGTGCTTCCTCTGCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RYSPPQTAALESMQLLEITSICS*CFLCRM Trigger: CATTCTGCAGAGGAAGCAGCAGCTGCAGATGGAGGT...TATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | AATACAGGTAGACTGACCACAGGCTCAAATTACACAGGTTATTATTACCAAGCCATCTCCACCTCCATCTaGAGCTGCTGCTTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTGRLTTGSNYTGYYYQAISTSI*SCCFLC Trigger: GCAGAGGAAGCAGCAGCTGCAGATGGAGGTGGAGAT...GGCTTGGTAATAATAACCTGTGTAATTTGAGCCTGTGGTCAGTCTACCTGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | TGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATTCTTTCTGTAGATTCTaGTGCTCTTCAGTGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CIPWTQVLSTTDCSFGKYSFCRF*CSSVSS Trigger: GGAGCTCACTGAAGAGCAGCAGAATCTACAGAAAGA...ATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | CCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATTCTGCTGCATCACCTaGTCCAGCTTTTTCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLHTHTLFVREVVLSFHQFCCIT*SSFFSK Trigger: CTTAGAGAAAAAGCTGGAGCAGGTGATGCAGCAGAA...TTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | TGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATTTCTGCTGCATCACCTaGTCCAGCTTTTTCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: CIPWTQVLSTTDCSFGKYFCCIT*SSFFSK Trigger: CTTAGAGAAAAAGCTGGAGCAGGTGATGCAGCAGAA...ATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | TACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAATTCTGCTGCATCACCTaGTCCAGCTTTTTCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: YHGHRYSPPQTAALESMQFCCIT*SSFFSK Trigger: CTTAGAGAAAAAGCTGGAGCAGGTGATGCAGCAGAA...TTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | AGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATATCACAGGTGCATTTCTaGTGCATCACCTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RYSPPQTAALESMQLLEISQVHF*CITCSS Trigger: GCTGGAGCAGGTGATGCAGCAGAAATGCACCTGTGA...TATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR CCA 90 bp | TGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTTCAGGGTTTTCCCATTaGCATGAATGTCGGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: WTQVLSTTDCSFGKYATVSGFSH*HECRSS Trigger: TGATGACCGACATTCATGCCAATGGGAAAACCCTGA...AACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR CCA 90 bp | ATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCATCAGGGTTTTCCCATTaGCATGAATGTCGGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: IPWTQVLSTTDCSFGKYASGFSH*HECRSS Trigger: TGATGACCGACATTCATGCCAATGGGAAAACCCTGA...TGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR CCA 90 bp | GGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGATCAGCCCACAGGATaGAGCATTAAATGGGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GHRYSPPQTAALESMQLLDQPTG*SIKWEY Trigger: ATACTCCCATTTAATGCTCCATCCTGTGGGCTGATC...TAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR CCA 90 bp | AGCTGTGATTGGCAGGTGGTTTGTTTAAACTCCTCCTTGATGGCACAGGAGCTTGATCAGCCCACAGGATaGAGCATTAAATGGGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SCDWQVVCLNSSLMAQELDQPTG*SIKWEY Trigger: ATACTCCCATTTAATGCTCCATCCTGTGGGCTGATC...AAGCTCCTGTGCCATCAAGGAGGAGTTTAAACAAACCACCTGCCAATCACAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTGGTAACAGTGCCACTTaGCTGACTCAAAGCCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSTTDCSFGKYATVRNTGGNSAT*LTQSPN Trigger: ATTGGGGCTTTGAGTCAGCCAAGTGGCACTGTTACC...ACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTGCTTCCTCTGCAGAATaGAGTTCAGCTTCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSTTDCSFGKYATVRNTGASSAE*SSASPA Trigger: AGCAGGAGAAGCTGAACTCCATTCTGCAGAGGAAGC...ACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTACTGTCGGCCTCAGCATaGTCTAGTCTTTGCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPPQTAALESMQLLEIQVLSASA*SSLCLS Trigger: ACTGAGGCAAAGACTAGACCATGCTGAGGCCGACAG...TACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| 3UTR CAA 72 bp | TCACTCTTAAACAGAAAGACAAATTACAACTGCTTCTaGTGTGCAGCATCAGGGCACAGCAAAGGCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLNRKTNYNCF*CAASGHSKGCP Trigger: GGGGCAGCCTTTGCTGTGCCCTGATGCTGCACACAAGAAGCAGTTGTAATTTGTCTTTCTGTTTAAGAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| 3UTR CAA 72 bp | AGCTGTGATTGGCAGGTGGTTTGTTTAAACTCCTCCTaGATGGCACAGGAGCTTCCACACTTAAGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCDWQVVCLNSS*MAQELPHLSTW Trigger: CCAAGTACTTAAGTGTGGAAGCTCCTGTGCCATCAAGGAGGAGTTTAAACAAACCACCTGCCAATCACAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | TCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATCAAAGCTATCAGAAGGAATaGGAAGAGGGCCGGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: STHTHCLLGRWYYHSINQSYQKE*EEGREE Trigger: TTCTTCCCGGCCCTCTTCTCATTCCTTCTGATAGCT...TTGATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | CATCAATCAAATTCCTCTAGGAGGAAACAGAAGAAACCCACTCTACAACCTGAAGGCGCAAAGAGACCCTaGCATTTGCCCAAGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: HQSNSSRRKQKKPTLQPEGAKRP*HLPKHS Trigger: TGAATGCTTGGGCAAATGTCAGGGTCTCTTTGCGCC...TTCAGGTTGTAGAGTGGGTTTCTTCTGTTTCCTCCTAGAGGAATTTGATTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TATCATTCCATCAATCAAATTCCTCTAGGAGGAAACAGAAGAAACCCACTCTACACAGTGCCACTTGGCTaGCTCAAAGCCCCAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YHSINQIPLGGNRRNPLYTVPLG*LKAPMA Trigger: TGCCATTGGGGCTTTGAGTCAGCCAAGTGGCACTGT...GTAGAGTGGGTTTCTTCTGTTTCCTCCTAGAGGAATTTGATTGATGGAATGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATATAACAGGATACCATaGTGGCAATTCCATTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PLHTHTLFVREVVLSFHQYNRIP*WQFHSR Trigger: TCGGGAATGGAATTGCCATCATGGTATCCTGTTATA...TTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TTAGAATTCAATTTTCAAAGCAAGCGACAAACACAAAGCCCTGTCAACCACACACCTCCCGCTCCTGTCTaGGTTCATCTTGGAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LEFNFQSKRQTQSPVNHTPPAPV*VHLGVP Trigger: AGGAACTCCAAGATGAACTCAGACAGGAGCGGGAGG...TGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTGCTTTGAAAATTGAATTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAATTCAATTTTCAAAGCAAGCGACAAACACAAAGCCCTGTCAACCACACAGGGGATCTGTGCGAATaGATGACGAACGTCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LEFNFQSKRQTQSPVNHTGDLCE*MTNVWG Trigger: TCCCCAGACGTTCGTCATGCATTCGCACAGATCCCC...TGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTGCTTTGAAAATTGAATTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | TATTGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGAAATCCATTTTCTCCTaGTCCTCAAGTGAGACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YCIPWTQVLSTTDCSFGKKSIFS*SSSETS Trigger: AGACGTCTCACTTGAGGAGCAGGAGAAAATGGATTT...CTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 |
||
| CDS-3UTR GCA 90 bp | GCACATAAACTTCACTATGTACAAATCAGGTTTTTCATTACTCCTTCCCACCCCACCTCCATCTGCAGCTaGTGCTTCCTCTGCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: AHKLHYVQIRFFITPSHPTSICS*CFLCRM Trigger: CATTCTGCAGAGGAAGCAGCAGCTGCAGATGGAGGT...GGGGTGGGAAGGAGTAATGAAAAACCTGATTTGTACATAGTGAAGTTTATGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | GAGATAGTCACTCTTAAACAGAAAGACAAATTACAACTGCTTCTTGTGTGCAGCATCTCCACCTCCATCTaGAGCTGCTGCTTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EIVTLKQKDKLQLLLVCSISTSI*SCCFLC Trigger: GCAGAGGAAGCAGCAGCTGCAGATGGAGGTGGAGAT...GCTGCACACAAGAAGCAGTTGTAATTTGTCTTTCTGTTTAAGAGTGACTATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | TATCATTCCATCAATCAAATTCCTCTAGGAGGAAACAGAAGAAACCCACTCTACATCTCCACCTCCATCTaGAGCTGCTGCTTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YHSINQIPLGGNRRNPLYISTSI*SCCFLC Trigger: GCAGAGGAAGCAGCAGCTGCAGATGGAGGTGGAGAT...GTAGAGTGGGTTTCTTCTGTTTCCTCCTAGAGGAATTTGATTGATGGAATGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAATTCAATTTTCAAAGCAAGCGACAAACACAAAGCCCTGTCAACCACACAATCTCCACCTCCATCTaGAGCTGCTGCTTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEFNFQSKRQTQSPVNHTISTSI*SCCFLC Trigger: GCAGAGGAAGCAGCAGCTGCAGATGGAGGTGGAGAT...TGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTGCTTTGAAAATTGAATTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTACAGGTGCATTTCTGCTaGATCACCTGCTCCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPPQTAALESMQLLEIQVQVHFC*ITCSSF Trigger: AAAGCTGGAGCAGGTGATGCAGCAGAAATGCACCTG...TACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | AATACAGGTAGACTGACCACAGGCTCAAATTACACAGGTTATTATTACCAAGCCTCACAGGTGCATTTCTaGTGCATCACCTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NTGRLTTGSNYTGYYYQASQVHF*CITCSS Trigger: GCTGGAGCAGGTGATGCAGCAGAAATGCACCTGTGA...GGCTTGGTAATAATAACCTGTGTAATTTGAGCCTGTGGTCAGTCTACCTGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | TCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATCAATGCATGACGAACGTCTaGGGAGCAAACATTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: STHTHCLLGRWYYHSINQCMTNV*GANIPQ Trigger: CTGTGGAATGTTTGCTCCCCAGACGTTCGTCATGCA...TTGATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTAGGTAACAGTGCCACTTaGCTGACTCAAAGCCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPPQTAALESMQLLEIQVGNSAT*LTQSPN Trigger: ATTGGGGCTTTGAGTCAGCCAAGTGGCACTGTTACC...TACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | TACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAATGTGTCTGGGGAACATaGTCACCTTCCTGTTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: YHGHRYSPPQTAALESMQCVWGT*SPSCFI Trigger: TATAAAACAGGAAGGTGACCATGTTCCCCAGACACA...TTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| 3UTR CAA 72 bp | CATGGACACAGGTACTCTCCACCACAGACTGCAGCTTaGGAAAGTATGCAACTGTTAGAAATACAGGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HGHRYSPPQTAA*ESMQLLEIQVD Trigger: GTCTACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAGCCAACCTTACGAGAGCAACCAGCACACAGAATGAGCATGCACGAAGTATTTTCTCCTCCAACTTaGAAACAAGAAATAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKPTLREQPAHRMSMHEVFSPPT*KQEIDS Trigger: GGAGTCTATTTCTTGTTTTCAAGTTGGAGGAGAAAA...TACTTCGTGCATGCTCATTCTGTGTGCTGGTTGCTCTCGTAAGGTTGGCTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTGTTTATCTGCTGGAGTaGAAATTCTCGGAGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSTTDCSFGKYATVRNTGVYLLE*KFSEDR Trigger: TCTGTCCTCCGAGAATTTTCACTCCAGCAGATAAAC...ACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTAAGTATGCTACCATTTTaGGGAAAAGTTCGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SPPQTAALESMQLLEIQVSMLPF*GKVRGR Trigger: GCGGCCACGAACTTTTCCTCAAAATGGTAGCATACT...TACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATTATAACAGGATACCATaGTGGCAATTCCATTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PSTHTHCLLGRWYYHSINYNRIP*WQFHSR Trigger: TCGGGAATGGAATTGCCATCATGGTATCCTGTTATA...ATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTAAATTCCTCCATCCTCTaGGCATGCTCACTCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPPQTAALESMQLLEIQVNSSIL*ACSLCN Trigger: GTTACAGAGTGAGCATGCTCAGAGGATGGAGGAATT...TACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | TCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATCAAAATTCCTCCATCCTCTaGGCATGCTCACTCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: STHTHCLLGRWYYHSINQNSSIL*ACSLCN Trigger: GTTACAGAGTGAGCATGCTCAGAGGATGGAGGAATT...TTGATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | TATTGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGCATACTGTGTTTATCTaGTGGAGTGAAAATTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: YCIPWTQVLSTTDCSFGKHTVFI*WSENSR Trigger: CCGAGAATTTTCACTCCAGCAGATAAACACAGTATG...CTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | AGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACTTCTGAATCACGCTTaGTTGTGCCTCTCACTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RYSPPQTAALESMQLLEILLNHA*LCLSLS Trigger: GCTTAGTGAGAGGCACAAGCAAGCGTGATTCAGAAG...TATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTTTCTGTAGATTCTGCTaGTCTTCAGTGAGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSTTDCSFGKYATVRNTGFCRFC*SSVSSF Trigger: GAAGGAGCTCACTGAAGAGCAGCAGAATCTACAGAA...ACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | AGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATAGACGACTTGCCAATCTaGAGCTTCAGCTCCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: RYSPPQTAALESMQLLEIDDLPI*SFSSFI Trigger: GATAAAGGAGCTGAAGCTGCAGATTGGCAAGTCGTC...TATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | AATACAGGTAGACTGACCACAGGCTCAAATTACACAGGTTATTATTACCAAGCCAGCAGAAAATGCTGCTaGTCCACCCAAAGAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTGRLTTGSNYTGYYYQASRKCC*STQRAL Trigger: CAGAGCTCTTTGGGTGGACCAGCAGCATTTTCTGCT...GGCTTGGTAATAATAACCTGTGTAATTTGAGCCTGTGGTCAGTCTACCTGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR CCA 90 bp | TTAGAATTCAATTTTCAAAGCAAGCGACAAACACAAAGCCCTGTCAACCACACACTGTCGGCCTCAGCATaGTCTAGTCTTTGCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LEFNFQSKRQTQSPVNHTLSASA*SSLCLS Trigger: ACTGAGGCAAAGACTAGACCATGCTGAGGCCGACAG...TGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTGCTTTGAAAATTGAATTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR CCA 90 bp | GAGATAGTCACTCTTAAACAGAAAGACAAATTACAACTGCTTCTTGTGTGCAGCCTGTCGGCCTCAGCATaGTCTAGTCTTTGCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EIVTLKQKDKLQLLLVCSLSASA*SSLCLS Trigger: ACTGAGGCAAAGACTAGACCATGCTGAGGCCGACAG...GCTGCACACAAGAAGCAGTTGTAATTTGTCTTTCTGTTTAAGAGTGACTATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | TATCATTCCATCAATCAAATTCCTCTAGGAGGAAACAGAAGAAACCCACTCTACCCTTCCAAAAGAGTCTaGGTGAGCTCTGTGGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: YHSINQIPLGGNRRNPLYPSKRV*VSSVEL Trigger: TAGCTCCACAGAGCTCACTCAGACTCTTTTGGAAGG...GTAGAGTGGGTTTCTTCTGTTTCCTCCTAGAGGAATTTGATTGATGGAATGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | ATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCATTTTCTCCTCCAACTTaGAAACAAGAAATAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPWTQVLSTTDCSFGKYAFSPPT*KQEIDS Trigger: GGAGTCTATTTCTTGTTTTCAAGTTGGAGGAGAAAA...TGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | TATTGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTTTTCTCCTCCAACTTaGAAACAAGAAATAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: YCIPWTQVLSTTDCSFGKFSPPT*KQEIDS Trigger: GGAGTCTATTTCTTGTTTTCAAGTTGGAGGAGAAAA...CTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | CATCAATCAAATTCCTCTAGGAGGAAACAGAAGAAACCCACTCTACAACCTGAAAGTATGCTACCATTTTaGGGAAAAGTTCGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HQSNSSRRKQKKPTLQPESMLPF*GKVRGR Trigger: GCGGCCACGAACTTTTCCTCAAAATGGTAGCATACT...TTCAGGTTGTAGAGTGGGTTTCTTCTGTTTCCTCCTAGAGGAATTTGATTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | CTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTTATAACAGGATACCATaGTGGCAATTCCATTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSTTDCSFGKYATVRNTGYNRIP*WQFHSR Trigger: TCGGGAATGGAATTGCCATCATGGTATCCTGTTATA...ACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | TCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTACCAAAGAGCTCTGACTaGTTAAGTGGAATTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPPQTAALESMQLLEIQVPKSSD*LSGIVP Trigger: TGGCACAATTCCACTTAAGCAGTCAGAGCTCTTTGG...TACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | AATACAGGTAGACTGACCACAGGCTCAAATTACACAGGTTATTATTACCAAGCCAATCACGCTTGCTTGTaGCTCTCACTAAGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NTGRLTTGSNYTGYYYQANHACL*LSLSCT Trigger: TGTGCAGCTTAGTGAGAGGCACAAGCAAGCGTGATT...GGCTTGGTAATAATAACCTGTGTAATTTGAGCCTGTGGTCAGTCTACCTGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | GCACATAAACTTCACTATGTACAAATCAGGTTTTTCATTACTCCTTCCCACCCCCTTCTGAATCACGCTTaGTTGTGCCTCTCACTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AHKLHYVQIRFFITPSHPLLNHA*LCLSLS Trigger: GCTTAGTGAGAGGCACAAGCAAGCGTGATTCAGAAG...GGGGTGGGAAGGAGTAATGAAAAACCTGATTTGTACATAGTGAAGTTTATGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | AGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATATTCTGTAGATTCTGCTaGTCTTCAGTGAGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RYSPPQTAALESMQLLEIFCRFC*SSVSSF Trigger: GAAGGAGCTCACTGAAGAGCAGCAGAATCTACAGAA...TATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | AGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATATCTTTCTGTAGATTCTaGTGCTCTTCAGTGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RYSPPQTAALESMQLLEISFCRF*CSSVSS Trigger: GGAGCTCACTGAAGAGCAGCAGAATCTACAGAAAGA...TATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAATTCAATTTTCAAAGCAAGCGACAAACACAAAGCCCTGTCAACCACACACAGGTGCATTTCTGCTaGATCACCTGCTCCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LEFNFQSKRQTQSPVNHTQVHFC*ITCSSF Trigger: AAAGCTGGAGCAGGTGATGCAGCAGAAATGCACCTG...TGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTGCTTTGAAAATTGAATTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | AGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATATCAGGGTTTTCCCATTaGCATGAATGTCGGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RYSPPQTAALESMQLLEISGFSH*HECRSS Trigger: TGATGACCGACATTCATGCCAATGGGAAAACCCTGA...TATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | AGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATAGGTGACATGCTCTCCTaGGAATATCGAGCAGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RYSPPQTAALESMQLLEIGDMLS*EYRAEN Trigger: ATTTTCTGCTCGATATTCCCAGGAGAGCATGTCACC...TATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTAGATCAGCCCACAGGATaGAGCATTAAATGGGAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SPPQTAALESMQLLEIQVDQPTG*SIKWEY Trigger: ATACTCCCATTTAATGCTCCATCCTGTGGGCTGATC...TACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | AATTCCTCTAGGAGGAAACAGAAGAAACCCACTCTACAACCTGAACAAATTAACTGCATGACGAACGTCTaGGGAGCAAACATTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NSSRRKQKKPTLQPEQINCMTNV*GANIPQ Trigger: CTGTGGAATGTTTGCTCCCCAGACGTTCGTCATGCA...GTTAATTTGTTCAGGTTGTAGAGTGGGTTTCTTCTGTTTCCTCCTAGAGGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | TTAGAATTCAATTTTCAAAGCAAGCGACAAACACAAAGCCCTGTCAACCACACATGCATGACGAACGTCTaGGGAGCAAACATTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LEFNFQSKRQTQSPVNHTCMTNV*GANIPQ Trigger: CTGTGGAATGTTTGCTCCCCAGACGTTCGTCATGCA...TGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTGCTTTGAAAATTGAATTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | GAGATAGTCACTCTTAAACAGAAAGACAAATTACAACTGCTTCTTGTGTGCAGCAGTATGCTACCATTTTaGGGAAAAGTTCGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: EIVTLKQKDKLQLLLVCSSMLPF*GKVRGR Trigger: GCGGCCACGAACTTTTCCTCAAAATGGTAGCATACT...GCTGCACACAAGAAGCAGTTGTAATTTGTCTTTCTGTTTAAGAGTGACTATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | AGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATATATAACAGGATACCATaGTGGCAATTCCATTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RYSPPQTAALESMQLLEIYNRIP*WQFHSR Trigger: TCGGGAATGGAATTGCCATCATGGTATCCTGTTATA...TATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | AATACAGGTAGACTGACCACAGGCTCAAATTACACAGGTTATTATTACCAAGCCCCAAAGAGCTCTGACTaGTTAAGTGGAATTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NTGRLTTGSNYTGYYYQAPKSSD*LSGIVP Trigger: TGGCACAATTCCACTTAAGCAGTCAGAGCTCTTTGG...GGCTTGGTAATAATAACCTGTGTAATTTGAGCCTGTGGTCAGTCTACCTGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | CATCAATCAAATTCCTCTAGGAGGAAACAGAAGAAACCCACTCTACAACCTGAAATATCGAGCAGAAAATaGTGCTGGTCCACCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HQSNSSRRKQKKPTLQPEISSRK*CWSTQR Trigger: TCTTTGGGTGGACCAGCAGCATTTTCTGCTCGATAT...TTCAGGTTGTAGAGTGGGTTTCTTCTGTTTCCTCCTAGAGGAATTTGATTGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | AATACAGGTAGACTGACCACAGGCTCAAATTACACAGGTTATTATTACCAAGCCATATCGAGCAGAAAATaGTGCTGGTCCACCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NTGRLTTGSNYTGYYYQAISSRK*CWSTQR Trigger: TCTTTGGGTGGACCAGCAGCATTTTCTGCTCGATAT...GGCTTGGTAATAATAACCTGTGTAATTTGAGCCTGTGGTCAGTCTACCTGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | GCACATAAACTTCACTATGTACAAATCAGGTTTTTCATTACTCCTTCCCACCCCAGAGACCCTGACATTTaGCCAAGCATTCATGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AHKLHYVQIRFFITPSHPRDPDI*PSIHVP Trigger: TGGAACATGAATGCTTGGGCAAATGTCAGGGTCTCT...GGGGTGGGAAGGAGTAATGAAAAACCTGATTTGTACATAGTGAAGTTTATGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | AGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATAAAATCCATTTTCTCCTaGTCCTCAAGTGAGACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RYSPPQTAALESMQLLEIKSIFS*SSSETS Trigger: AGACGTCTCACTTGAGGAGCAGGAGAAAATGGATTT...TATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 |
||
| CDS-3UTR GCA 90 bp | GAGATAGTCACTCTTAAACAGAAAGACAAATTACAACTGCTTCTTGTGTGCAGCAATCACGCTTGCTTGTaGCTCTCACTAAGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: EIVTLKQKDKLQLLLVCSNHACL*LSLSCT Trigger: TGTGCAGCTTAGTGAGAGGCACAAGCAAGCGTGATT...GCTGCACACAAGAAGCAGTTGTAATTTGTCTTTCTGTTTAAGAGTGACTATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | GAGATAGTCACTCTTAAACAGAAAGACAAATTACAACTGCTTCTTGTGTGCAGCCTTCTGAATCACGCTTaGTTGTGCCTCTCACTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EIVTLKQKDKLQLLLVCSLLNHA*LCLSLS Trigger: GCTTAGTGAGAGGCACAAGCAAGCGTGATTCAGAAG...GCTGCACACAAGAAGCAGTTGTAATTTGTCTTTCTGTTTAAGAGTGACTATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR GCA 90 bp | AATACAGGTAGACTGACCACAGGCTCAAATTACACAGGTTATTATTACCAAGCCTCTTTCTGTAGATTCTaGTGCTCTTCAGTGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTGRLTTGSNYTGYYYQASFCRF*CSSVSS Trigger: GGAGCTCACTGAAGAGCAGCAGAATCTACAGAAAGA...GGCTTGGTAATAATAACCTGTGTAATTTGAGCCTGTGGTCAGTCTACCTGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | TGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCGTGTGTTTCAGACTaGGGTTTAAATTTAAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CIPWTQVLSTTDCSFGKYACVSD*GLNLKF Trigger: AAACTTTAAATTTAAACCCCAGTCTGAAACACACGC...ATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | CATCAATCAAATTCCTCTAGGAGGAAACAGAAGAAACCCACTCTACAACCTGAAGGTGACATGCTCTCCTaGGAATATCGAGCAGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HQSNSSRRKQKKPTLQPEGDMLS*EYRAEN Trigger: ATTTTCTGCTCGATATTCCCAGGAGAGCATGTCACC...TTCAGGTTGTAGAGTGGGTTTCTTCTGTTTCCTCCTAGAGGAATTTGATTGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | TATCATTCCATCAATCAAATTCCTCTAGGAGGAAACAGAAGAAACCCACTCTACCCAGTTTCCTTCAACTaGGCCAGAGAGCTTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YHSINQIPLGGNRRNPLYPVSFN*ARELLA Trigger: TGCTAAAAGCTCTCTGGCCCAGTTGAAGGAAACTGG...GTAGAGTGGGTTTCTTCTGTTTCCTCCTAGAGGAATTTGATTGATGGAATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | TCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATCAATGTGTCTGGGGAACATaGTCACCTTCCTGTTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: STHTHCLLGRWYYHSINQCVWGT*SPSCFI Trigger: TATAAAACAGGAAGGTGACCATGTTCCCCAGACACA...TTGATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTTGTACAGGTAGTAGCTaGGGTGTAAAAATGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSTTDCSFGKYATVRNTGCTGSS*GVKMNV Trigger: CACATTCATTTTTACACCCCAGCTACTACCTGTACA...ACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTAGCTTTTCTGACTGTTTaGAGGTGGACTTACTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPPQTAALESMQLLEIQVAFLTV*RWTYLS Trigger: AGACAAGTAAGTCCACCTCCAAACAGTCAGAAAAGC...TACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTAGTTTTCCCATTGGCATaGATGTCGGTCATCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPPQTAALESMQLLEIQVVFPLA*MSVIIF Trigger: AAAAATGATGACCGACATTCATGCCAATGGGAAAAC...TACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTTTTTCTCCTCCAACTTaGAAACAAGAAATAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSTTDCSFGKYATVRNTGFSPPT*KQEIDS Trigger: GGAGTCTATTTCTTGTTTTCAAGTTGGAGGAGAAAA...ACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR CCA 90 bp | AGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATATGTACAGGTAGTAGCTaGGGTGTAAAAATGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RYSPPQTAALESMQLLEICTGSS*GVKMNV Trigger: CACATTCATTTTTACACCCCAGCTACTACCTGTACA...TATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTATGTACAGGTAGTAGCTaGGGTGTAAAAATGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPQTAALESMQLLEIQVCTGSS*GVKMNV Trigger: CACATTCATTTTTACACCCCAGCTACTACCTGTACA...TACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR TCA 90 bp | AATACAGGTAGACTGACCACAGGCTCAAATTACACAGGTTATTATTACCAAGCCGTTTTCCCATTGGCATaGATGTCGGTCATCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NTGRLTTGSNYTGYYYQAVFPLA*MSVIIF Trigger: AAAAATGATGACCGACATTCATGCCAATGGGAAAAC...GGCTTGGTAATAATAACCTGTGTAATTTGAGCCTGTGGTCAGTCTACCTGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CCA 90 bp | GAGATAGTCACTCTTAAACAGAAAGACAAATTACAACTGCTTCTTGTGTGCAGCTGTGTCTGGGGAACATaGTCACCTTCCTGTTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: EIVTLKQKDKLQLLLVCSCVWGT*SPSCFI Trigger: TATAAAACAGGAAGGTGACCATGTTCCCCAGACACA...GCTGCACACAAGAAGCAGTTGTAATTTGTCTTTCTGTTTAAGAGTGACTATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR CCA 90 bp | AATTCCTCTAGGAGGAAACAGAAGAAACCCACTCTACAACCTGAACAAATTAACTGTGTCTGGGGAACATaGTCACCTTCCTGTTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: NSSRRKQKKPTLQPEQINCVWGT*SPSCFI Trigger: TATAAAACAGGAAGGTGACCATGTTCCCCAGACACA...GTTAATTTGTTCAGGTTGTAGAGTGGGTTTCTTCTGTTTCCTCCTAGAGGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR TCA 90 bp | AATTCCTCTAGGAGGAAACAGAAGAAACCCACTCTACAACCTGAACAAATTAACGTTTTCCCATTGGCATaGATGTCGGTCATCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NSSRRKQKKPTLQPEQINVFPLA*MSVIIF Trigger: AAAAATGATGACCGACATTCATGCCAATGGGAAAAC...GTTAATTTGTTCAGGTTGTAGAGTGGGTTTCTTCTGTTTCCTCCTAGAGGAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | TTAGAATTCAATTTTCAAAGCAAGCGACAAACACAAAGCCCTGTCAACCACACACATACTGTGTTTATCTaGTGGAGTGAAAATTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LEFNFQSKRQTQSPVNHTHTVFI*WSENSR Trigger: CCGAGAATTTTCACTCCAGCAGATAAACACAGTATG...TGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTGCTTTGAAAATTGAATTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR GCA 90 bp | TATCATTCCATCAATCAAATTCCTCTAGGAGGAAACAGAAGAAACCCACTCTACCATACTGTGTTTATCTaGTGGAGTGAAAATTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: YHSINQIPLGGNRRNPLYHTVFI*WSENSR Trigger: CCGAGAATTTTCACTCCAGCAGATAAACACAGTATG...GTAGAGTGGGTTTCTTCTGTTTCCTCCTAGAGGAATTTGATTGATGGAATGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS TCA 90 bp | CTGTCGGCCTCAGCATGGTCTAGTCTTTGCCTCAGTTCTGCCAGCTaGGCCGCATACTCGGCCTCCCTGTCCTTCTCCAAGGTTGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSASAWSSLCLSSAS*AAYSASLSFSKVES Trigger: TGACTCAACCTTGGAGAAGGACAGGGAGGCCGAGTATGCGGCTCAGCTGGCAGAACTGAGGCAAAGACTAGACCATGCTGAGGCCGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR CAA 90 bp | GTGCAGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTGCTCCTTCTTCACCTaGGTCAGGGTTTTCCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VQHQGTAKAAPPLHTHTLCSFFT*VRVFPL Trigger: CAATGGGAAAACCCTGACCAAGGTGAAGAAGGAGCA...CAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| CDS-3UTR CAA 90 bp | ACTGCTTCTTGTGTGCAGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACGCTCCTTCATCGCCTTaGAACTGCTCAGCATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TASCVQHQGTAKAAPPLHAPSSP*NCSASP Trigger: TGGAGATGCTGAGCAGTTCAAAGGCGATGAAGGAGC...GTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCTGCACACAAGAAGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS-3UTR CAA 90 bp | AGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGCTGTCTGAGTTCATCTaGGAGTTCCTGCCTGTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RAQQRLPLPSTHTHCLLGLSEFI*EFLPVG Trigger: GCCGACAGGCAGGAACTCCAAGATGAACTCAGACAG...CCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS GCA 90 bp | TTCTGTCTCGCCTCCCGCTCCTGTCTGAGTTCATCTTGGAGTTCCTaGCTGTCGGCCTCAGCATGGTCTAGTCTTTGCCTCAGTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FCLASRSCLSSSWSS*LSASAWSSLCLSSA Trigger: GGCAGAACTGAGGCAAAGACTAGACCATGCTGAGGCCGACAGGCAGGAACTCCAAGATGAACTCAGACAGGAGCGGGAGGCGAGACAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR CAA 90 bp | CCCCCAGGACCAGCTTTGCAGCTCCTGCTAGGGAAATACCTCGGGCACAGTTCCTCCATGATCTTCCCCTaGTCGTCTTCACCATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPGPALQLLLGKYLGHSSSMIFP*SSSPSL Trigger: CAGAGATGGTGAAGACGACAAGGGGAAGATCATGGA...GGAACTGTGCCCGAGGTATTTCCCTAGCAGGAGCTGCAAAGCTGGTCCTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTTAGGGAGGTGGGCTCCTTCATCGCCTTaGAACTGCTCAGCATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QQRLPLPSTHTHCLLGRWAPSSP*NCSASP Trigger: TGGAGATGCTGAGCAGTTCAAAGGCGATGAAGGAGC...CCACCTCCCTAACAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR CAA 90 bp | AGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTCCATGATCTTCCCCTaGTCGTCTTCACCATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SIRAQQRLPLPSTHTHCLSMIFP*SSSPSL Trigger: CAGAGATGGTGAAGACGACAAGGGGAAGATCATGGA...CAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS TCA 90 bp | CCTTTATCATCATCTCCAGCTTCTGTCTCGCCTCCCGCTCCTGTCTaGGTTCATCTTGGAGTTCCTGCCTGTCGGCCTCAGCATGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PLSSSPASVSPPAPV*VHLGVPACRPQHGL Trigger: TAGACCATGCTGAGGCCGACAGGCAGGAACTCCAAGATGAACTCAGACAGGAGCGGGAGGCGAGACAGAAGCTGGAGATGATGATAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CAA 90 bp | AGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGTGTCCTTCTCCAAGGTaGAGTCACAGGTGCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SIRAQQRLPLPSTHTHCLCPSPR*SHRCIS Trigger: AGAAATGCACCTGTGACTCAACCTTGGAGAAGGACA...CAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS CCA 90 bp | TTGGAGGTGGACTTACTTGTCTCTGCCTTGGTGGCCTCTTTAGACTaGGACGCAGCAGATGTGAGCGACACATTCGGTGCAACCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LEVDLLVSALVASLD*DAADVSDTFGATTL Trigger: CAAAGTGGTTGCACCGAATGTGTCGCTCACATCTGCTGCGTCCCAGTCTAAAGAGGCCACCAAGGCAGAGACAAGTAAGTCCACCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 |
||
| CDS GCA 90 bp | ATCGCCTTTGAACTGCTCAGCATCTCCACCTCCATCTGCAGCTGCTaGTTCCTCTGCAGAATGGAGTTCAGCTTCTCCTGCTGTCTTACA | + |
|
Preference number: 5 (lower is better) Translates to: IAFELLSISTSICSC*FLCRMEFSFSCCLT Trigger: TGTAAGACAGCAGGAGAAGCTGAACTCCATTCTGCAGAGGAAGCAGCAGCTGCAGATGGAGGTGGAGATGCTGAGCAGTTCAAAGGCGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS GCA 90 bp | TTCATCGCCTTTGAACTGCTCAGCATCTCCACCTCCATCTGCAGCTaGTGCTTCCTCTGCAGAATGGAGTTCAGCTTCTCCTGCTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FIAFELLSISTSICS*CFLCRMEFSFSCCL Trigger: AAGACAGCAGGAGAAGCTGAACTCCATTCTGCAGAGGAAGCAGCAGCTGCAGATGGAGGTGGAGATGCTGAGCAGTTCAAAGGCGATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS TCA 90 bp | TGGGAATATCGAGCAGAAAATGCTGCTGGTCCACCCAAAGAGCTCTaGCTGCTTAAGTGGAATTGTGCCAGCGTGTGTTTCAGACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WEYRAENAAGPPKEL*LLKWNCASVCFRLG Trigger: CCCCAGTCTGAAACACACGCTGGCACAATTCCACTTAAGCAGTCAGAGCTCTTTGGGTGGACCAGCAGCATTTTCTGCTCGATATTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 ENSMUST00000123532.2 |
||
| CDS-3UTR CAA 90 bp | AGCATCAGGGCACAGCAAAGGCTGCCCCTCCCCTCCACACACACACACTGTTTGCGTTCAGCTTTTTATTaGAACCCTGAACTAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SIRAQQRLPLPSTHTHCLRSAFY*NPELRR Trigger: TCTCCTTAGTTCAGGGTTCAAATAAAAAGCTGAACG...CAAACAGTGTGTGTGTGTGGAGGGGAGGGGCAGCCTTTGCTGTGCCCTGATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR CAA 90 bp | TGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTCTGTCTGAGTTCATCTaGGAGTTCCTGCCTGTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: WTQVLSTTDCSFGKYATVLSEFI*EFLPVG Trigger: GCCGACAGGCAGGAACTCCAAGATGAACTCAGACAG...AACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCGACAAACACAAAGCCCTGTCAACCACACACAGGTGTGTCTTCTTCAGCTCAATGGCAAGTTCTCTaGTCAGGGGATCTGTGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: QATNTKPCQPHTGVSSSAQWQVL*SGDLCE Trigger: TTCGCACAGATCCCCTGACAAGAGAACTTGCCATTG...AGCTGAAGAAGACACACCTGTGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGATTGGCAGGTGGTTTGTTTAAACTCCTCCTTGATGGCACAGGAGCTTGCTCCTTCATCGCCTTaGAACTGCTCAGCATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SCDWQVVCLNSSLMAQELAPSSP*NCSASP Trigger: TGGAGATGCTGAGCAGTTCAAAGGCGATGAAGGAGC...AAGCTCCTGTGCCATCAAGGAGGAGTTTAAACAAACCACCTGCCAATCACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
||
| CDS TCA 90 bp | TCTGTAACGACTCAAGCTCTTTCTGTAGATTCTGCTGCTCTTCAGTaGGCTCCTTCATCGCCTTTGAACTGCTCAGCATCTCCACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVTTQALSVDSAALQ*APSSPLNCSASPPP Trigger: TGGAGGTGGAGATGCTGAGCAGTTCAAAGGCGATGAAGGAGCTCACTGAAGAGCAGCAGAATCTACAGAAAGAGCTTGAGTCGTTACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS GCA 90 bp | GCATGCTCACTCTGTAACGACTCAAGCTCTTTCTGTAGATTCTGCTaGTCTTCAGTGAGCTCCTTCATCGCCTTTGAACTGCTCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: ACSLCNDSSSFCRFC*SSVSSFIAFELLSI Trigger: GATGCTGAGCAGTTCAAAGGCGATGAAGGAGCTCACTGAAGAGCAGCAGAATCTACAGAAAGAGCTTGAGTCGTTACAGAGTGAGCATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS CCA 90 bp | TGGGGTTTAAATTTAAAGTTTCAGGTAGAGAAACACGGTTTCGCTTaGCGTGCTCGCCATCCGGCTCCACGGATGCATCTCCATAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WGLNLKFQVEKHGFA*RARHPAPRMHLHSH Trigger: ATGACTATGGAGATGCATCCGTGGAGCCGGATGGCGAGCACGCCAAGCGAAACCGTGTTTCTCTACCTGAAACTTTAAATTTAAACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 ENSMUST00000123532.2 |
||
| CDS-3UTR CAA 90 bp | ATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCACAATGGCAAGTTCTCTaGTCAGGGGATCTGTGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: IPWTQVLSTTDCSFGKYAQWQVL*SGDLCE Trigger: TTCGCACAGATCCCCTGACAAGAGAACTTGCCATTG...TGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CAA 90 bp | TGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTCAATGGCAAGTTCTCTaGTCAGGGGATCTGTGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: WTQVLSTTDCSFGKYATVQWQVL*SGDLCE Trigger: TTCGCACAGATCCCCTGACAAGAGAACTTGCCATTG...AACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CAA 90 bp | TACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAATTACTTGTCTCTGCCTaGGTGGCCTCTTTAGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: YHGHRYSPPQTAALESMQLLVSA*VASLDW Trigger: CCAGTCTAAAGAGGCCACCAAGGCAGAGACAAGTAA...TTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 |
||
| CDS-3UTR CAA 90 bp | TGCATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATTCCATGATCTTCCCCTaGTCGTCTTCACCATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CIPWTQVLSTTDCSFGKYSMIFP*SSSPSL Trigger: CAGAGATGGTGAAGACGACAAGGGGAAGATCATGGA...ATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS GCA 90 bp | AATATCGAGCAGAAAATGCTGCTGGTCCACCCAAAGAGCTCTGACTaGTTAAGTGGAATTGTGCCAGCGTGTGTTTCAGACTGGGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: NIEQKMLLVHPKSSD*LSGIVPACVSDWGL Trigger: TAAACCCCAGTCTGAAACACACGCTGGCACAATTCCACTTAAGCAGTCAGAGCTCTTTGGGTGGACCAGCAGCATTTTCTGCTCGATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 ENSMUST00000123532.2 |
||
| CDS-3UTR CAA 90 bp | ATACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCATGTCCTTCTCCAAGGTaGAGTCACAGGTGCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IPWTQVLSTTDCSFGKYACPSPR*SHRCIS Trigger: AGAAATGCACCTGTGACTCAACCTTGGAGAAGGACA...TGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CAA 90 bp | AATACAGGTAGACTGACCACAGGCTCAAATTACACAGGTTATTATTACCAAGCCGGGCCGGGAAGAACCTaGGTCAGGGTTTTCCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: NTGRLTTGSNYTGYYYQAGPGRT*VRVFPL Trigger: CAATGGGAAAACCCTGACCAAGGTTCTTCCCGGCCC...GGCTTGGTAATAATAACCTGTGTAATTTGAGCCTGTGGTCAGTCTACCTGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117728.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTTTACTTGTCTCTGCCTaGGTGGCCTCTTTAGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSTTDCSFGKYATVRNTGLLVSA*VASLDW Trigger: CCAGTCTAAAGAGGCCACCAAGGCAGAGACAAGTAA...ACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 |
||
| CDS-3UTR CAA 90 bp | AGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATAGCTCCTTCATCGCCTTaGAACTGCTCAGCATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RYSPPQTAALESMQLLEIAPSSP*NCSASP Trigger: TGGAGATGCTGAGCAGTTCAAAGGCGATGAAGGAGC...TATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CAA 90 bp | AATACAGGTAGACTGACCACAGGCTCAAATTACACAGGTTATTATTACCAAGCCCTGTCTGAGTTCATCTaGGAGTTCCTGCCTGTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: NTGRLTTGSNYTGYYYQALSEFI*EFLPVG Trigger: GCCGACAGGCAGGAACTCCAAGATGAACTCAGACAG...GGCTTGGTAATAATAACCTGTGTAATTTGAGCCTGTGGTCAGTCTACCTGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCGACAAACACAAAGCCCTGTCAACCACACACAGGTGTGTCTTCTTCAGCTGTAAGACACTGTTTTTaGATGCTGACTACTCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: QATNTKPCQPHTGVSSSAVRHCF*MLTTLM Trigger: CATGAGAGTAGTCAGCATCAAAAAACAGTGTCTTAC...AGCTGAAGAAGACACACCTGTGTGTGGTTGACAGGGCTTTGTGTTTGTCGCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTTGTCCTTCTCCAAGGTaGAGTCACAGGTGCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSTTDCSFGKYATVRNTGCPSPR*SHRCIS Trigger: AGAAATGCACCTGTGACTCAACCTTGGAGAAGGACA...ACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR CAA 90 bp | GAGATAGTCACTCTTAAACAGAAAGACAAATTACAACTGCTTCTTGTGTGCAGCCTGTCTGAGTTCATCTaGGAGTTCCTGCCTGTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: EIVTLKQKDKLQLLLVCSLSEFI*EFLPVG Trigger: GCCGACAGGCAGGAACTCCAAGATGAACTCAGACAG...GCTGCACACAAGAAGCAGTTGTAATTTGTCTTTCTGTTTAAGAGTGACTATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR CAA 90 bp | GGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTACGTTCAGCTTTTTATTaGAACCCTGAACTAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GHRYSPPQTAALESMQLLRSAFY*NPELRR Trigger: TCTCCTTAGTTCAGGGTTCAAATAAAAAGCTGAACG...TAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR CAA 90 bp | CCAAAGCCAACCTTACGAGAGCAACCAGCACACAGAATGAGCATGCACGAAGTACTTTTCTCCTCCAACTaGAAAACAAGAAATAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: PKPTLREQPAHRMSMHEVLFSSN*KTRNRL Trigger: GAGTCTATTTCTTGTTTTCAAGTTGGAGGAGAAAAG...TACTTCGTGCATGCTCATTCTGTGTGCTGGTTGCTCTCGTAAGGTTGGCTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118470.8 |
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| CDS-3UTR CAA 90 bp | TACCATGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAAGTAAGACACTGTTTTTaGATGCTGACTACTCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: YHGHRYSPPQTAALESMQVRHCF*MLTTLM Trigger: CATGAGAGTAGTCAGCATCAAAAAACAGTGTCTTAC...TTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCATGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 |
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| CDS-3UTR CAA 90 bp | AATACAGGTAGACTGACCACAGGCTCAAATTACACAGGTTATTATTACCAAGCCTCCATGATCTTCCCCTaGTCGTCTTCACCATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NTGRLTTGSNYTGYYYQASMIFP*SSSPSL Trigger: CAGAGATGGTGAAGACGACAAGGGGAAGATCATGGA...GGCTTGGTAATAATAACCTGTGTAATTTGAGCCTGTGGTCAGTCTACCTGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CAA 90 bp | TCCACACACACACACTGTTTGTTAGGGAGGTGGTACTATCATTCCATCAATCAATGTCCTTCTCCAAGGTaGAGTCACAGGTGCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: STHTHCLLGRWYYHSINQCPSPR*SHRCIS Trigger: AGAAATGCACCTGTGACTCAACCTTGGAGAAGGACA...TTGATTGATGGAATGATAGTACCACCTCCCTAACAAACAGTGTGTGTGTGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS CCA 90 bp | AGCTCTGACTGCTTAAGTGGAATTGTGCCAGCGTGTGTTTCAGACTaGGGTTTAAATTTAAAGTTTCAGGTAGAGAAACACGGTTTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSDCLSGIVPACVSD*GLNLKFQVEKHGFA Trigger: AGCGAAACCGTGTTTCTCTACCTGAAACTTTAAATTTAAACCCCAGTCTGAAACACACGCTGGCACAATTCCACTTAAGCAGTCAGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 ENSMUST00000123532.2 |
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| CDS-3UTR CAA 90 bp | TGGACACAGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTCTTTTCTCCTCCAACTaGAAAACAAGAAATAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: WTQVLSTTDCSFGKYATVLFSSN*KTRNRL Trigger: GAGTCTATTTCTTGTTTTCAAGTTGGAGGAGAAAAG...AACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCTGTGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR CAA 90 bp | AATTCCTCTAGGAGGAAACAGAAGAAACCCACTCTACAACCTGAACAAATTAACCAATGGCAAGTTCTCTaGTCAGGGGATCTGTGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: NSSRRKQKKPTLQPEQINQWQVL*SGDLCE Trigger: TTCGCACAGATCCCCTGACAAGAGAACTTGCCATTG...GTTAATTTGTTCAGGTTGTAGAGTGGGTTTCTTCTGTTTCCTCCTAGAGGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACAGGTACGTTCAGCTTTTTATTaGAACCCTGAACTAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPPQTAALESMQLLEIQVRSAFY*NPELRR Trigger: TCTCCTTAGTTCAGGGTTCAAATAAAAAGCTGAACG...TACCTGTATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR CAA 90 bp | AATACAGGTAGACTGACCACAGGCTCAAATTACACAGGTTATTATTACCAAGCCCGTTCAGCTTTTTATTaGAACCCTGAACTAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NTGRLTTGSNYTGYYYQARSAFY*NPELRR Trigger: TCTCCTTAGTTCAGGGTTCAAATAAAAAGCTGAACG...GGCTTGGTAATAATAACCTGTGTAATTTGAGCCTGTGGTCAGTCTACCTGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS-3UTR CAA 90 bp | AGGTACTCTCCACCACAGACTGCAGCTTTGGAAAGTATGCAACTGTTAGAAATACTTTTCTCCTCCAACTaGAAAACAAGAAATAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: RYSPPQTAALESMQLLEILFSSN*KTRNRL Trigger: GAGTCTATTTCTTGTTTTCAAGTTGGAGGAGAAAAG...TATTTCTAACAGTTGCATACTTTCCAAAGCTGCAGTCTGTGGTGGAGAGTACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS-3UTR CAA 90 bp | GAGATAGTCACTCTTAAACAGAAAGACAAATTACAACTGCTTCTTGTGTGCAGCCTTTTCTCCTCCAACTaGAAAACAAGAAATAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: EIVTLKQKDKLQLLLVCSLFSSN*KTRNRL Trigger: GAGTCTATTTCTTGTTTTCAAGTTGGAGGAGAAAAG...GCTGCACACAAGAAGCAGTTGTAATTTGTCTTTCTGTTTAAGAGTGACTATCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118470.8 |
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| CDS GCA 72 bp | GCCTCCCGCTCCTGTCTGAGTTCATCTTGGAGTTCCTaGCTGTCGGCCTCAGCATGGTCTAGTCTTTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASRSCLSSSWSS*LSASAWSSLCL Trigger: GAGGCAAAGACTAGACCATGCTGAGGCCGACAGGCAGGAACTCCAAGATGAACTCAGACAGGAGCGGGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS TCA 72 bp | AGCCGCATACTCGGCCTCCCTGTCCTTCTCCAAGGTTaGGTCACAGGTGCATTTCTGCTGCATCACCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SRILGLPVLLQG*VTGAFLLHHLL Trigger: GAGCAGGTGATGCAGCAGAAATGCACCTGTGACTCAACCTTGGAGAAGGACAGGGAGGCCGAGTATGCGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS TCA 72 bp | TCAGCATGGTCTAGTCTTTGCCTCAGTTCTGCCAGCTaGGCCGCATACTCGGCCTCCCTGTCCTTCTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SAWSSLCLSSAS*AAYSASLSFSK Trigger: CTTGGAGAAGGACAGGGAGGCCGAGTATGCGGCTCAGCTGGCAGAACTGAGGCAAAGACTAGACCATGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS GCA 72 bp | GAACTGCTCAGCATCTCCACCTCCATCTGCAGCTGCTaGTTCCTCTGCAGAATGGAGTTCAGCTTCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ELLSISTSICSC*FLCRMEFSFSC Trigger: GCAGGAGAAGCTGAACTCCATTCTGCAGAGGAAGCAGCAGCTGCAGATGGAGGTGGAGATGCTGAGCAGTTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS CCA 72 bp | TTGTCAGGGGATCTGTGCGAATGCATGACGAACGTCTaGGGAGCAAACATTCCACAGCACTCCAGGCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSGDLCECMTNV*GANIPQHSRHW Trigger: CCAGTGCCTGGAGTGCTGTGGAATGTTTGCTCCCCAGACGTTCGTCATGCATTCGCACAGATCCCCTGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS CCA 72 bp | GACTTACTTGTCTCTGCCTTGGTGGCCTCTTTAGACTaGGACGCAGCAGATGTGAGCGACACATTCGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: DLLVSALVASLD*DAADVSDTFGA Trigger: TGCACCGAATGTGTCGCTCACATCTGCTGCGTCCCAGTCTAAAGAGGCCACCAAGGCAGAGACAAGTAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 |
||
| CDS TCA 72 bp | GGCAAGTTCTCTTGTCAGGGGATCTGTGCGAATGCATaGCGAACGTCTGGGGAGCAAACATTCCACAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: GKFSCQGICANA*RTSGEQTFHST Trigger: AGTGCTGTGGAATGTTTGCTCCCCAGACGTTCGTCATGCATTCGCACAGATCCCCTGACAAGAGAACTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS CAA 72 bp | CACTTGGCTGACTCAAAGCCCCAATGGCAAGTTCTCTaGTCAGGGGATCTGTGCGAATGCATGACGAACGTC | + |
|
Preference number: 6 (lower is better) Translates to: HLADSKPQWQVL*SGDLCECMTNV Trigger: GACGTTCGTCATGCATTCGCACAGATCCCCTGACAAGAGAACTTGCCATTGGGGCTTTGAGTCAGCCAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS CAA 72 bp | TCTGACTGTTTGGAGGTGGACTTACTTGTCTCTGCCTaGGTGGCCTCTTTAGACTGGGACGCAGCAGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: SDCLEVDLLVSA*VASLDWDAADV Trigger: CACATCTGCTGCGTCCCAGTCTAAAGAGGCCACCAAGGCAGAGACAAGTAAGTCCACCTCCAAACAGTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 |
||
| CDS TCA 72 bp | CGAGCAGAAAATGCTGCTGGTCCACCCAAAGAGCTCTaGCTGCTTAAGTGGAATTGTGCCAGCGTGTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RAENAAGPPKEL*LLKWNCASVCF Trigger: GAAACACACGCTGGCACAATTCCACTTAAGCAGTCAGAGCTCTTTGGGTGGACCAGCAGCATTTTCTGCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 ENSMUST00000123532.2 |
||
| CDS GCA 72 bp | CAATGGCAAGTTCTCTTGTCAGGGGATCTGTGCGAATaGATGACGAACGTCTGGGGAGCAAACATTCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: QWQVLLSGDLCE*MTNVWGANIPQ Trigger: CTGTGGAATGTTTGCTCCCCAGACGTTCGTCATGCATTCGCACAGATCCCCTGACAAGAGAACTTGCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS GCA 72 bp | AGACTGGGACGCAGCAGATGTGAGCGACACATTCGGTaGAACCACTTTGTCACACATGTACAGGTAGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RLGRSRCERHIR*NHFVTHVQVVA Trigger: AGCTACTACCTGTACATGTGTGACAAAGTGGTTGCACCGAATGTGTCGCTCACATCTGCTGCGTCCCAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
||
| CDS CCA 72 bp | AATTTAAAGTTTCAGGTAGAGAAACACGGTTTCGCTTaGCGTGCTCGCCATCCGGCTCCACGGATGCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: NLKFQVEKHGFA*RARHPAPRMHL Trigger: GAGATGCATCCGTGGAGCCGGATGGCGAGCACGCCAAGCGAAACCGTGTTTCTCTACCTGAAACTTTAAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 ENSMUST00000123532.2 |
||
| CDS CAA 72 bp | CCAGAAGTGGAGAGGAATCTTCTGAATCACGCTTGCTaGTGCCTCTCACTAAGCTGCACACAGCAGACTCAG | + |
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Preference number: 6 (lower is better) Translates to: PEVERNLLNHAC*CLSLSCTQQTQ Trigger: CTGAGTCTGCTGTGTGCAGCTTAGTGAGAGGCACAAGCAAGCGTGATTCAGAAGATTCCTCTCCACTTCTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS CAA 72 bp | CTGACCAGAAGTGGAGAGGAATCTTCTGAATCACGCTaGCTTGTGCCTCTCACTAAGCTGCACACAGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: LTRSGEESSESR*LVPLTKLHTAD Trigger: GTCTGCTGTGTGCAGCTTAGTGAGAGGCACAAGCAAGCGTGATTCAGAAGATTCCTCTCCACTTCTGGTCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS GCA 72 bp | CAGAAAATGCTGCTGGTCCACCCAAAGAGCTCTGACTaGTTAAGTGGAATTGTGCCAGCGTGTGTTTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: QKMLLVHPKSSD*LSGIVPACVSD Trigger: GTCTGAAACACACGCTGGCACAATTCCACTTAAGCAGTCAGAGCTCTTTGGGTGGACCAGCAGCATTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 ENSMUST00000123532.2 |
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| CDS CCA 72 bp | GATGCTGACTACTCTCATGAGGCTTTTCTGACTGTTTaGAGGTGGACTTACTTGTCTCTGCCTTGGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: DADYSHEAFLTV*RWTYLSLPWWP Trigger: AGGCCACCAAGGCAGAGACAAGTAAGTCCACCTCCAAACAGTCAGAAAAGCCTCATGAGAGTAGTCAGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 |
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| CDS CAA 72 bp | AAATTTAAAGTTTCAGGTAGAGAAACACGGTTTCGCTaGGCGTGCTCGCCATCCGGCTCCACGGATGCATCT | + |
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Preference number: 6 (lower is better) Translates to: KFKVSGRETRFR*ACSPSGSTDAS Trigger: AGATGCATCCGTGGAGCCGGATGGCGAGCACGCCAAGCGAAACCGTGTTTCTCTACCTGAAACTTTAAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 ENSMUST00000123532.2 |
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| CDS CAA 90 bp | TCACCATCTCTGACCAGAAGTGGAGAGGAATCTTCTGAATCACGCTaGCTTGTGCCTCTCACTAAGCTGCACACAGCAGACTCAGATTTC | + |
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Preference number: 6 (lower is better) Translates to: SPSLTRSGEESSESR*LVPLTKLHTADSDF Trigger: GAAATCTGAGTCTGCTGTGTGCAGCTTAGTGAGAGGCACAAGCAAGCGTGATTCAGAAGATTCCTCTCCACTTCTGGTCAGAGATGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS GCA 72 bp | CTGTCCTTCTCCAAGGTTGAGTCACAGGTGCATTTCTaGTGCATCACCTGCTCCAGCTTTTTCTCTAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: LSFSKVESQVHF*CITCSSFFSKS Trigger: AGACTTAGAGAAAAAGCTGGAGCAGGTGATGCAGCAGAAATGCACCTGTGACTCAACCTTGGAGAAGGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS TCA 72 bp | ACTCAAGCTCTTTCTGTAGATTCTGCTGCTCTTCAGTaGGCTCCTTCATCGCCTTTGAACTGCTCAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: TQALSVDSAALQ*APSSPLNCSAS Trigger: AGATGCTGAGCAGTTCAAAGGCGATGAAGGAGCTCACTGAAGAGCAGCAGAATCTACAGAAAGAGCTTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS GCA 72 bp | CTCTGTAACGACTCAAGCTCTTTCTGTAGATTCTGCTaGTCTTCAGTGAGCTCCTTCATCGCCTTTGAACTG | + |
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Preference number: 6 (lower is better) Translates to: LCNDSSSFCRFC*SSVSSFIAFEL Trigger: CAGTTCAAAGGCGATGAAGGAGCTCACTGAAGAGCAGCAGAATCTACAGAAAGAGCTTGAGTCGTTACAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS CCA 72 bp | CATCTCCATAGTCATCTAAGTGCTCCTTCTTCACCTTaGTCAGGGTTTTCCCATTGGCATGAATGTCGGTCA | + |
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Preference number: 6 (lower is better) Translates to: HLHSHLSAPSSP*SGFSHWHECRS Trigger: TGACCGACATTCATGCCAATGGGAAAACCCTGACCAAGGTGAAGAAGGAGCACTTAGATGACTATGGAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000118204.2 ENSMUST00000118470.8 ENSMUST00000123532.2 |
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| CDS GCA 72 bp | TCACTCTGTAACGACTCAAGCTCTTTCTGTAGATTCTaGTGCTCTTCAGTGAGCTCCTTCATCGCCTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: SLCNDSSSFCRF*CSSVSSFIAFE Trigger: TTCAAAGGCGATGAAGGAGCTCACTGAAGAGCAGCAGAATCTACAGAAAGAGCTTGAGTCGTTACAGAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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| CDS TCA 72 bp | AACATGGTCACCTTCCTGTTTTATAACAGGATACCATaGTGGCAATTCCATTCCCGATGGTGTATCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: NMVTFLFYNRIP*WQFHSRWCICL Trigger: AAGACAGATACACCATCGGGAATGGAATTGCCATCATGGTATCCTGTTATAAAACAGGAAGGTGACCATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029194.12 ENSMUST00000117728.8 ENSMUST00000118204.2 ENSMUST00000118470.8 |
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