Pregenerated sensors for SKAP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000057058

Ensembl transcript IDs: ENSMUST00000071510.14, ENSMUST00000100519.11, ENSMUST00000100521.10, ENSMUST00000103154.11, ENSMUST00000107662.9, ENSMUST00000107663.4

Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	TCTGTACTTGCTTTGGATGCTCACCTTGGGCTGGGAGCCGCGGTCTaGGAGGGAGTTTGTTTGCCAGGTCCTTGTCAACCTGATGGCTGG	+
Preference number: 1 (lower is better) Translates to: SVLALDAHLGLGAAV*EGVCLPGPCQPDGW Trigger: CCAGCCATCAGGTTGACAAGGACCTGGCAAACAAACTCCCTCCCAGACCGCGGCTCCCAGCCCAAGGTGAGCATCCAAAGCAAGTACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
3UTR CCA 90 bp	GTGCTGAGGCAGCACGCTTATTCGTATGAAGTTCTGTACTTGCTTTaGATGCTCACCTTGGGCTGGGAGCCGCGGTCTGGGAGGGAGTTT	+
Preference number: 1 (lower is better) Translates to: VLRQHAYSYEVLYLL*MLTLGWEPRSGREF Trigger: AAACTCCCTCCCAGACCGCGGCTCCCAGCCCAAGGTGAGCATCCAAAGCAAGTACAGAACTTCATACGAATAAGCGTGCTGCCTCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
3UTR CCA 90 bp	ACTCATCTTATCAGTGGCTTAAAGTCACAGGAAGCAGCAGAGTCTTaGCTCCATTCAGGGAAGAGAAGGATCCATGGCCAGAGTAGGGGA	+
Preference number: 1 (lower is better) Translates to: THLISGLKSQEAAES*LHSGKRRIHGQSRG Trigger: TCCCCTACTCTGGCCATGGATCCTTCTCTTCCCTGAATGGAGCCAAGACTCTGCTGCTTCCTGTGACTTTAAGCCACTGATAAGATGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
3UTR TCA 90 bp	TGCCCCCACTGTTTCTCCAAATGCGTAGGTACGTCATCAAGTTTCTaGACATGGTTCATATCTGTTTCATCCCCGGGTCTCACATCTGGA	+
Preference number: 1 (lower is better) Translates to: CPHCFSKCVGTSSSF*TWFISVSSPGLTSG Trigger: TCCAGATGTGAGACCCGGGGATGAAACAGATATGAACCATGTTCAGAAACTTGATGACGTACCTACGCATTTGGAGAAACAGTGGGGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
3UTR GCA 90 bp	CAGCCCCACCATACAAGGCAAGGAAACATATCCAGACTTTATTTCTaGTTTGCAAGCCACAACCCATCAGTAACCTCTTCCTCCCATGAT	+
Preference number: 1 (lower is better) Translates to: QPHHTRQGNISRLYF*FASHNPSVTSSSHD Trigger: ATCATGGGAGGAAGAGGTTACTGATGGGTTGTGGCTTGCAAAGCAGAAATAAAGTCTGGATATGTTTCCTTGCCTTGTATGGTGGGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
3UTR GCA 90 bp	AAAAAGAGCAGAAATTACCGCTTGTTTTTGTTCATTTGGCTGCAATaGTCCCTTCTTATGGCCTATCAAACAGGTTGCTTAGCTCGCACA	+
Preference number: 1 (lower is better) Translates to: KKSRNYRLFLFIWLQ*SLLMAYQTGCLART Trigger: TGTGCGAGCTAAGCAACCTGTTTGATAGGCCATAAGAAGGGAGCATTGCAGCCAAATGAACAAAAACAAGCGGTAATTTCTGCTCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR TCA 90 bp	TACTGTGTCCTGTTTCATGCAGACTTAAGGACCAGCCACCCACAATaGAACCTGCTAACAGATATGTTTGCTGTCTGTATTTTAAATGTC	+
Preference number: 1 (lower is better) Translates to: YCVLFHADLRTSHPQ*NLLTDMFAVCILNV Trigger: GACATTTAAAATACAGACAGCAAACATATCTGTTAGCAGGTTTCATTGTGGGTGGCTGGTCCTTAAGTCTGCATGAAACAGGACACAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
3UTR CAA 90 bp	CGGCTGGTGCTGAGGCAGCACGCTTATTCGTATGAAGTTCTGTACTaGCTTTGGATGCTCACCTTGGGCTGGGAGCCGCGGTCTGGGAGG	+
Preference number: 2 (lower is better) Translates to: RLVLRQHAYSYEVLY*LWMLTLGWEPRSGR Trigger: CCTCCCAGACCGCGGCTCCCAGCCCAAGGTGAGCATCCAAAGCAAGTACAGAACTTCATACGAATAAGCGTGCTGCCTCAGCACCAGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
3UTR CAA 90 bp	CACGCTTATTCGTATGAAGTTCTGTACTTGCTTTGGATGCTCACCTaGGGCTGGGAGCCGCGGTCTGGGAGGGAGTTTGTTTGCCAGGTC	+
Preference number: 2 (lower is better) Translates to: HAYSYEVLYLLWMLT*GWEPRSGREFVCQV Trigger: GACCTGGCAAACAAACTCCCTCCCAGACCGCGGCTCCCAGCCCAAGGTGAGCATCCAAAGCAAGTACAGAACTTCATACGAATAAGCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
3UTR-3UTR TCA 90 bp	AGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGGGGACGGGAGTTTCTaGTGGTCTGAGAATATGTTC	+
Preference number: 2 (lower is better) Translates to: RLMDVGTQRGQEARSWLLGDGSF*WSENMF Trigger: GAACATATTCTCAGACCATCAGAAACTCCCGTCCCC...AAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
3UTR-3UTR CCA 90 bp	ATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGAGAAACAGGGAAGCAGCAGAGTCTTaGCTCCATTCAGGGAAGAGA	+
Preference number: 2 (lower is better) Translates to: MWGHREGRKLEAGCLRNREAAES*LHSGKR Trigger: TCTCTTCCCTGAATGGAGCCAAGACTCTGCTGCTTC...CCTGTTTCTCAAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
3UTR-3UTR TCA 90 bp	TGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAGAGTTTCTGATGGTCTaGGAATATGTTCCCTGGGCT	+
Preference number: 2 (lower is better) Translates to: CSRLVGKAYGCGDTERAGEFLMV*EYVPWA Trigger: AGCCCAGGGAACATATTCTCAGACCATCAGAAACTC...TCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCTACAAGCCTGCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
3UTR-3UTR TCA 90 bp	ACCCTGTACTTCCCTTCCCCTCTTCATGGGCAAGTTTGCATAAGGATTTGTGGCGGGGGAACCACCATTTaGGTAAAGCTACACTTTCCC	+
Preference number: 2 (lower is better) Translates to: TLYFPSPLHGQVCIRICGGGTTI*VKLHFP Trigger: GGGAAAGTGTAGCTTTACTCAAATGGTGGTTCCCCC...GCCACAAATCCTTATGCAAACTTGCCCATGAAGAGGGGAAGGGAAGTACAGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR CAA 90 bp	TGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTaGAGAAACAGGTCTGATGAACTGTCTTCTTCCTACTCATCTTAT	+
Preference number: 2 (lower is better) Translates to: WMWGHREGRKLEAGC*RNRSDELSSSYSSY Trigger: ATAAGATGAGTAGGAAGAAGACAGTTCATCAGACCTGTTTCTCAAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
3UTR-3UTR CCA 90 bp	AGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTACTCATCTTATCAGTaGCTTAAAGTCACAGGAAGC	+
Preference number: 2 (lower is better) Translates to: RKGLWMWGHREGRKLEAGYSSYQ*LKVTGS Trigger: GCTTCCTGTGACTTTAAGCCACTGATAAGATGAGTA...GCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
3UTR-3UTR CCA 90 bp	TCTGAACATGGTTCATATCTGTTTCATCCCCGGGTCTCACATCTGGAGCTAATCTCCAAAGCATACTGCTaGGGCTCAGTGAGAACCTGG	+
Preference number: 2 (lower is better) Translates to: SEHGSYLFHPRVSHLELISKAYC*GSVRTW Trigger: CCAGGTTCTCACTGAGCCCCAGCAGTATGCTTTGGA...GATTAGCTCCAGATGTGAGACCCGGGGATGAAACAGATATGAACCATGTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
3UTR-3UTR CCA 90 bp	TGTGGCACTGTCTTAGGAGCCCCACGTTATGCAATGGACCAAGAGCAGCCATCTTTGTTTTTGTTCATTTaGCTGCAATGCTCCCTTCTT	+
Preference number: 2 (lower is better) Translates to: CGTVLGAPRYAMDQEQPSLFLFI*LQCSLL Trigger: AAGAAGGGAGCATTGCAGCCAAATGAACAAAAACAA...AGATGGCTGCTCTTGGTCCATTGCATAACGTGGGGCTCCTAAGACAGTGCCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR-3UTR CCA 90 bp	GAGGAAGAAAAAGACCCTTATGCTCTGCTTAATTTCCCTTCAGCCATCTTTCCACCCCACGTTATGCAATaGACCAAGAGCAGCCATCTC	+
Preference number: 2 (lower is better) Translates to: EEEKDPYALLNFPSAIFPPHVMQ*TKSSHL Trigger: GAGATGGCTGCTCTTGGTCCATTGCATAACGTGGGG...TGGAAAGATGGCTGAAGGGAAATTAAGCAGAGCATAAGGGTCTTTTTCTTCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR-3UTR CCA 90 bp	CAAGGAAACATATCCAGACTTTATTTCTGCTTTGCAAGCCACAACCCATCAGTAGAAGCAGCAGAGTCTTaGCTCCATTCAGGGAAGAGA	+
Preference number: 2 (lower is better) Translates to: QGNISRLYFCFASHNPSVEAAES*LHSGKR Trigger: TCTCTTCCCTGAATGGAGCCAAGACTCTGCTGCTTC...TACTGATGGGTTGTGGCTTGCAAAGCAGAAATAAAGTCTGGATATGTTTCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
3UTR-3UTR TCA 90 bp	CAAGGAAACATATCCAGACTTTATTTCTGCTTTGCAAGCCACAACCCATCAGTAGAGTTTCTGATGGTCTaGGAATATGTTCCCTGGGCT	+
Preference number: 2 (lower is better) Translates to: QGNISRLYFCFASHNPSVEFLMV*EYVPWA Trigger: AGCCCAGGGAACATATTCTCAGACCATCAGAAACTC...TACTGATGGGTTGTGGCTTGCAAAGCAGAAATAAAGTCTGGATATGTTTCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
3UTR-3UTR TCA 90 bp	AGAAACAGGTCTGATGAACTGTCTTCTTCCTACTCATCTTATCAGTGGCTTAAAGGGGACGGGAGTTTCTaGTGGTCTGAGAATATGTTC	+
Preference number: 2 (lower is better) Translates to: RNRSDELSSSYSSYQWLKGDGSF*WSENMF Trigger: GAACATATTCTCAGACCATCAGAAACTCCCGTCCCC...TTTAAGCCACTGATAAGATGAGTAGGAAGAAGACAGTTCATCAGACCTGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
3UTR CAA 90 bp	TTATTAAGTTTCACAGAAGGAAATAATACACCGTGTTTGTGTCCATaGGCTCTGGCTTTCACTTCCAACAGTGAGCGTGTAAGTGAGGAG	+
Preference number: 2 (lower is better) Translates to: LLSFTEGNNTPCLCP*ALAFTSNSERVSEE Trigger: CTCCTCACTTACACGCTCACTGTTGGAAGTGAAAGCCAGAGCCAATGGACACAAACACGGTGTATTATTTCCTTCTGTGAAACTTAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
3UTR CAA 90 bp	AGCGTAAATAAGGAAAATAACGAAGTGCTCCAGAGGGACCTAATTTaGTTGCCTAGGAATAGAGCGATGAGCTGGAACAAGGTCAGATTT	+
Preference number: 2 (lower is better) Translates to: SVNKENNEVLQRDLI*LPRNRAMSWNKVRF Trigger: AAATCTGACCTTGTTCCAGCTCATCGCTCTATTCCTAGGCAACAAAATTAGGTCCCTCTGGAGCACTTCGTTATTTTCCTTATTTACGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR CAA 90 bp	CCTTTGGTATTATTAAGTTTCACAGAAGGAAATAATACACCGTGTTaGTGTCCATTGGCTCTGGCTTTCACTTCCAACAGTGAGCGTGTA	+
Preference number: 2 (lower is better) Translates to: PLVLLSFTEGNNTPC*CPLALAFTSNSERV Trigger: TACACGCTCACTGTTGGAAGTGAAAGCCAGAGCCAATGGACACAAACACGGTGTATTATTTCCTTCTGTGAAACTTAATAATACCAAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
3UTR-3UTR CCA 90 bp	AACATTAGCGTAAATAAGGAAAATAACGAAGTGCTCCAGAGGGACCTAATTTTGCCCTTCCCCTCTTCATaGGCAAGTTTGCATAAGGAT	+
Preference number: 2 (lower is better) Translates to: NISVNKENNEVLQRDLILPFPSS*ASLHKD Trigger: ATCCTTATGCAAACTTGCCCATGAAGAGGGGAAGGG...CAAAATTAGGTCCCTCTGGAGCACTTCGTTATTTTCCTTATTTACGCTAATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR CAA 90 bp	CACAAAGTTCAAAAAGAGCAGAAATTACCGCTTGTTTTTGTTCATTaGGCTGCAATGCTCCCTTCTTATGGCCTATCAAACAGGTTGCTT	+
Preference number: 2 (lower is better) Translates to: HKVQKEQKLPLVFVH*AAMLPSYGLSNRLL Trigger: AAGCAACCTGTTTGATAGGCCATAAGAAGGGAGCATTGCAGCCAAATGAACAAAAACAAGCGGTAATTTCTGCTCTTTTTGAACTTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR-3UTR CCA 90 bp	CAAGGAAACATATCCAGACTTTATTTCTGCTTTGCAAGCCACAACCCATCAGTATACTCATCTTATCAGTaGCTTAAAGTCACAGGAAGC	+
Preference number: 2 (lower is better) Translates to: QGNISRLYFCFASHNPSVYSSYQ*LKVTGS Trigger: GCTTCCTGTGACTTTAAGCCACTGATAAGATGAGTA...TACTGATGGGTTGTGGCTTGCAAAGCAGAAATAAAGTCTGGATATGTTTCCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
3UTR-3UTR CCA 90 bp	AACATTAGCGTAAATAAGGAAAATAACGAAGTGCTCCAGAGGGACCTAATTTTGAATAGAGCGATGAGCTaGAACAAGGTCAGATTTAAA	+
Preference number: 2 (lower is better) Translates to: NISVNKENNEVLQRDLILNRAMS*NKVRFK Trigger: TTTAAATCTGACCTTGTTCCAGCTCATCGCTCTATT...CAAAATTAGGTCCCTCTGGAGCACTTCGTTATTTTCCTTATTTACGCTAATGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR GCA 72 bp	CCCTGCCTGCTGAGAACCAGCAAGGGTCATACAGGCTaGTGGATCGTCTTCCAGCCACAAGGTGGCTCCCCC	+
Preference number: 3 (lower is better) Translates to: PCLLRTSKGHTG*WIVFQPQGGSP Trigger: GGGGGAGCCACCTTGTGGCTGGAAGACGATCCAGCAGCCTGTATGACCCTTGCTGGTTCTCAGCAGGCAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR GCA 72 bp	TTGGGCTGGGAGCCGCGGTCTGGGAGGGAGTTTGTTTaGCAGGTCCTTGTCAACCTGATGGCTGGCTGGTGG	+
Preference number: 3 (lower is better) Translates to: LGWEPRSGREFV*QVLVNLMAGWW Trigger: CCACCAGCCAGCCATCAGGTTGACAAGGACCTGGCAAACAAACTCCCTCCCAGACCGCGGCTCCCAGCCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
3UTR CCA 72 bp	GGCACGGTACATGCACGGAGGTCAGAGGACAACATGTaGGTCCTGGGGCCTGAACTCAGGTCATCAGGCCTG	+
Preference number: 3 (lower is better) Translates to: GTVHARRSEDNM*VLGPELRSSGL Trigger: CAGGCCTGATGACCTGAGTTCAGGCCCCAGGACCCACATGTTGTCCTCTGACCTCCGTGCATGTACCGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
3UTR CCA 72 bp	GCTTTGGATGCTCACCTTGGGCTGGGAGCCGCGGTCTaGGAGGGAGTTTGTTTGCCAGGTCCTTGTCAACCT	+
Preference number: 3 (lower is better) Translates to: ALDAHLGLGAAV*EGVCLPGPCQP Trigger: AGGTTGACAAGGACCTGGCAAACAAACTCCCTCCCAGACCGCGGCTCCCAGCCCAAGGTGAGCATCCAAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
3UTR TCA 72 bp	CTGAGCAGAGATGGGTGGTGGAGAAGTAGGTCCCAGTaGCTCAGCCACGAGGTGTGTGGGGTGGTTAGCTCT	+
Preference number: 3 (lower is better) Translates to: LSRDGWWRSRSQ*LSHEVCGVVSS Trigger: AGAGCTAACCACCCCACACACCTCGTGGCTGAGTCACTGGGACCTACTTCTCCACCACCCATCTCTGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
3UTR GCA 72 bp	ACGCTTATTCGTATGAAGTTCTGTACTTGCTTTGGATaGTCACCTTGGGCTGGGAGCCGCGGTCTGGGAGGG	+
Preference number: 3 (lower is better) Translates to: TLIRMKFCTCFG*SPWAGSRGLGG Trigger: CCCTCCCAGACCGCGGCTCCCAGCCCAAGGTGAGCATCCAAAGCAAGTACAGAACTTCATACGAATAAGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
3UTR CCA 72 bp	CAGCACGCTTATTCGTATGAAGTTCTGTACTTGCTTTaGATGCTCACCTTGGGCTGGGAGCCGCGGTCTGGG	+
Preference number: 3 (lower is better) Translates to: QHAYSYEVLYLL*MLTLGWEPRSG Trigger: CCCAGACCGCGGCTCCCAGCCCAAGGTGAGCATCCAAAGCAAGTACAGAACTTCATACGAATAAGCGTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
3UTR GCA 72 bp	TGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTaGTTGAGAAACAGGTCTGATGAACTGTCTTCTTCC	+
Preference number: 3 (lower is better) Translates to: WGHREGRKLEAG*LRNRSDELSSS Trigger: GGAAGAAGACAGTTCATCAGACCTGTTTCTCAAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
3UTR CCA 72 bp	CCCTGCCTTCACTCTCAGTGTATGATTGCTGGCAGATaGTCTCCGCTGGATCAAACACAGAAGAAATGCCCC	+
Preference number: 3 (lower is better) Translates to: PCLHSQCMIAGR*SPLDQTQKKCP Trigger: GGGGCATTTCTTCTGTGTTTGATCCAGCGGAGACCATCTGCCAGCAATCATACACTGAGAGTGAAGGCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
3UTR TCA 72 bp	CAAGGCATAAGCACTTGGAATCATGCAGTAGATCCCTaGGCAGAGATGGGTGGTGGAGAAGTAGGTCCCAGT	+
Preference number: 3 (lower is better) Translates to: QGISTWNHAVDP*AEMGGGEVGPS Trigger: ACTGGGACCTACTTCTCCACCACCCATCTCTGCTCAGGGATCTACTGCATGATTCCAAGTGCTTATGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
3UTR GCA 72 bp	ACCCTGTACTTCCCTTCCCCTCTTCATGGGCAAGTTTaGATAAGGATTTGTGGCACTGTCTTAGGAGCCCCA	+
Preference number: 3 (lower is better) Translates to: TLYFPSPLHGQV*IRICGTVLGAP Trigger: TGGGGCTCCTAAGACAGTGCCACAAATCCTTATGCAAACTTGCCCATGAAGAGGGGAAGGGAAGTACAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR TCA 72 bp	AGGTGCTCTTACCCATGGAACCATCTCGCCAGCCCGTaGTATTATGTCAGAAAGGAATTCAGCCCCACCATA	+
Preference number: 3 (lower is better) Translates to: RCSYPWNHLASP*YYVRKEFSPTI Trigger: TATGGTGGGGCTGAATTCCTTTCTGACATAATATCACGGGCTGGCGAGATGGTTCCATGGGTAAGAGCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
3UTR TCA 72 bp	TGTCAAGCGTTTTTAAGAACACGGAGCGGCTGGTGCTaGGGCAGCACGCTTATTCGTATGAAGTTCTGTACT	+
Preference number: 3 (lower is better) Translates to: CQAFLRTRSGWC*GSTLIRMKFCT Trigger: AGTACAGAACTTCATACGAATAAGCGTGCTGCCTCAGCACCAGCCGCTCCGTGTTCTTAAAAACGCTTGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
3UTR GCA 72 bp	CCATCAGTAACCTCTTCCTCCCATGATTTCCTTCGTTaGTGTCTTCTTTGTAGCAGGCTTGTAGGAAAGGCT	+
Preference number: 3 (lower is better) Translates to: PSVTSSSHDFLR*CLLCSRLVGKA Trigger: AGCCTTTCCTACAAGCCTGCTACAAAGAAGACAGCAACGAAGGAAATCATGGGAGGAAGAGGTTACTGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
3UTR GCA 72 bp	AAGGATTTGTGGCACTGTCTTAGGAGCCCCACGTTATaGAATGGACCAAGAGCAGCCATCTCTAAATACACA	+
Preference number: 3 (lower is better) Translates to: KDLWHCLRSPTL*NGPRAAISKYT Trigger: TGTGTATTTAGAGATGGCTGCTCTTGGTCCATTGCATAACGTGGGGCTCCTAAGACAGTGCCACAAATCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR CCA 72 bp	TTTTTATCCCTGCCTTCACTCTCAGTGTATGATTGCTaGCAGATGGTCTCCGCTGGATCAAACACAGAAGAA	+
Preference number: 3 (lower is better) Translates to: FLSLPSLSVYDC*QMVSAGSNTEE Trigger: TTCTTCTGTGTTTGATCCAGCGGAGACCATCTGCCAGCAATCATACACTGAGAGTGAAGGCAGGGATAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
3UTR TCA 72 bp	TGTTTCTCCAAATGCGTAGGTACGTCATCAAGTTTCTaGACATGGTTCATATCTGTTTCATCCCCGGGTCTC	+
Preference number: 3 (lower is better) Translates to: CFSKCVGTSSSF*TWFISVSSPGL Trigger: GAGACCCGGGGATGAAACAGATATGAACCATGTTCAGAAACTTGATGACGTACCTACGCATTTGGAGAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
3UTR GCA 72 bp	AAGGCAAGGAAACATATCCAGACTTTATTTCTGCTTTaGAAGCCACAACCCATCAGTAACCTCTTCCTCCCA	+
Preference number: 3 (lower is better) Translates to: KARKHIQTLFLL*KPQPISNLFLP Trigger: TGGGAGGAAGAGGTTACTGATGGGTTGTGGCTTGCAAAGCAGAAATAAAGTCTGGATATGTTTCCTTGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
3UTR-3UTR CAA 90 bp	AGGAGGAAGAAAAAGACCCTTATGCTCTGCTTAATTTCCCTTCAGCCATCTTTCAGGGACCTAATTTTGTaGCCTAGGAATAGAGCGATG	+
Preference number: 3 (lower is better) Translates to: RRKKKTLMLCLISLQPSFRDLIL*PRNRAM Trigger: CATCGCTCTATTCCTAGGCAACAAAATTAGGTCCCT...GAAAGATGGCTGAAGGGAAATTAAGCAGAGCATAAGGGTCTTTTTCTTCCTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR TCA 72 bp	CTGTTTCATGCAGACTTAAGGACCAGCCACCCACAATaGAACCTGCTAACAGATATGTTTGCTGTCTGTATT	+
Preference number: 3 (lower is better) Translates to: LFHADLRTSHPQ*NLLTDMFAVCI Trigger: AATACAGACAGCAAACATATCTGTTAGCAGGTTTCATTGTGGGTGGCTGGTCCTTAAGTCTGCATGAAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
3UTR GCA 72 bp	CATACAAGGCAAGGAAACATATCCAGACTTTATTTCTaGTTTGCAAGCCACAACCCATCAGTAACCTCTTCC	+
Preference number: 3 (lower is better) Translates to: HTRQGNISRLYF*FASHNPSVTSS Trigger: GGAAGAGGTTACTGATGGGTTGTGGCTTGCAAAGCAGAAATAAAGTCTGGATATGTTTCCTTGCCTTGTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
3UTR GCA 72 bp	AGAGCAGAAATTACCGCTTGTTTTTGTTCATTTGGCTaGAATGCTCCCTTCTTATGGCCTATCAAACAGGTT	+
Preference number: 3 (lower is better) Translates to: RAEITACFCSFG*NAPFLWPIKQV Trigger: AACCTGTTTGATAGGCCATAAGAAGGGAGCATTGCAGCCAAATGAACAAAAACAAGCGGTAATTTCTGCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR-3UTR CAA 90 bp	AACATTAGCGTAAATAAGGAAAATAACGAAGTGCTCCAGAGGGACCTAATTTTGAGGGGGAACCACCATTaGAGTAAAGCTACACTTTCC	+
Preference number: 3 (lower is better) Translates to: NISVNKENNEVLQRDLILRGNHH*SKATLS Trigger: GGAAAGTGTAGCTTTACTCAAATGGTGGTTCCCCCT...CAAAATTAGGTCCCTCTGGAGCACTTCGTTATTTTCCTTATTTACGCTAATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR-3UTR CAA 90 bp	AGGAGGAAGAAAAAGACCCTTATGCTCTGCTTAATTTCCCTTCAGCCATCTTTCAGCAGAAATTACCGCTaGTTTTTGTTCATTTGGCTG	+
Preference number: 3 (lower is better) Translates to: RRKKKTLMLCLISLQPSFSRNYR*FLFIWL Trigger: CAGCCAAATGAACAAAAACAAGCGGTAATTTCTGCT...GAAAGATGGCTGAAGGGAAATTAAGCAGAGCATAAGGGTCTTTTTCTTCCTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR TCA 72 bp	ACTAATTATGAACTGTCAGTACCGTTCTTTTCATTGTaGATTCAATGGCTCACAAGCCAGTCTTTGGCACAC	+
Preference number: 3 (lower is better) Translates to: TNYELSVPFFSL*IQWLTSQSLAH Trigger: GTGTGCCAAAGACTGGCTTGTGAGCCATTGAATTCACAATGAAAAGAACGGTACTGACAGTTCATAATTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR GCA 72 bp	TATATAAGATTGTTGAGAATACTGTGTCCTGTTTCATaGAGACTTAAGGACCAGCCACCCACAATGAAACCT	+
Preference number: 3 (lower is better) Translates to: YIRLLRILCPVS*RLKDQPPTMKP Trigger: AGGTTTCATTGTGGGTGGCTGGTCCTTAAGTCTGCATGAAACAGGACACAGTATTCTCAACAATCTTATATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
3UTR-3UTR CAA 90 bp	CAGAGTTTAGGCCATAAACCTGTTACACAAAGTTATTCCTTTATTGTTTCTTCCCCTGTTGGAACTCCTTaGGTATTATTAAGTTTCACA	+
Preference number: 3 (lower is better) Translates to: QSLGHKPVTQSYSFIVSSPVGTP*VLLSFT Trigger: TGTGAAACTTAATAATACCAAAGGAGTTCCAACAGG...GGAAGAAACAATAAAGGAATAACTTTGTGTAACAGGTTTATGGCCTAAACTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
3UTR TCA 72 bp	TTAATTTCCCTTCAGCCATCTTTCCAAAGGTACAGCTaGGCTAACATTAGCGTAAATAAGGAAAATAACGAA	+
Preference number: 3 (lower is better) Translates to: LISLQPSFQRYS*ANISVNKENNE Trigger: TTCGTTATTTTCCTTATTTACGCTAATGTTAGCTCAGCTGTACCTTTGGAAAGATGGCTGAAGGGAAATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR CAA 72 bp	CTTGGGCTGGGAGCCGCGGTCTGGGAGGGAGTTTGTTaGCCAGGTCCTTGTCAACCTGATGGCTGGCTGGTG	+
Preference number: 4 (lower is better) Translates to: LGLGAAVWEGVC*PGPCQPDGWLV Trigger: CACCAGCCAGCCATCAGGTTGACAAGGACCTGGCAAACAAACTCCCTCCCAGACCGCGGCTCCCAGCCCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
CDS-3UTR GCA 90 bp	GTTCTGTACTTGCTTTGGATGCTCACCTTGGGCTGGGAGCCGCGGTCTGGGAGGGGCTCTCTGATCCTGTaGCCCAGGGCTGAGGTTCTC	+
Preference number: 4 (lower is better) Translates to: VLYLLWMLTLGWEPRSGRGSLIL*PRAEVL Trigger: GAGAACCTCAGCCCTGGGGCACAGGATCAGAGAGCC...CCTCCCAGACCGCGGCTCCCAGCCCAAGGTGAGCATCCAAAGCAAGTACAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
CDS-3UTR GCA 90 bp	TGGGGCCTGAACTCAGGTCATCAGGCCTGGCAGCAGGTGCTCTTACCCATGGAAGCAAGGCCATGGCTCTaGACTGGGAGCCAGACCTTG	+
Preference number: 4 (lower is better) Translates to: WGLNSGHQAWQQVLLPMEARPWL*TGSQTL Trigger: CAAGGTCTGGCTCCCAGTGCAGAGCCATGGCCTTGC...TTCCATGGGTAAGAGCACCTGCTGCCAGGCCTGATGACCTGAGTTCAGGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR GCA 90 bp	GTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGAGAAACAGGTCGCAAGGCCATGGCTCTaGACTGGGAGCCAGACCTTG	+
Preference number: 4 (lower is better) Translates to: VGTQRGQEARSWLLEKQVARPWL*TGSQTL Trigger: CAAGGTCTGGCTCCCAGTGCAGAGCCATGGCCTTGC...GACCTGTTTCTCAAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	AGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGCTCAGGCAAGGCCATaGCTCTGCACTGGGAGCCAG	+
Preference number: 4 (lower is better) Translates to: RLMDVGTQRGQEARSWLLAQARP*LCTGSQ Trigger: CTGGCTCCCAGTGCAGAGCCATGGCCTTGCCTGAGC...AAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	AGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCGCTCAGGCAAGGCCATaGCTCTGCACTGGGAGCCAG	+
Preference number: 4 (lower is better) Translates to: SRLVGKAYGCGDTERAGSAQARP*LCTGSQ Trigger: CTGGCTCCCAGTGCAGAGCCATGGCCTTGCCTGAGC...GCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCTACAAGCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	CTCCATTCAGGGAAGAGAAGGATCCATGGCCAGAGTAGGGGACGGGAGTTTCTGCCTGTGCCCCAGGGCTaGGGTTCTCATTCTGCAAGC	+
Preference number: 4 (lower is better) Translates to: LHSGKRRIHGQSRGREFLPVPQG*GSHSAS Trigger: GCTTGCAGAATGAGAACCTCAGCCCTGGGGCACAGG...CAGAAACTCCCGTCCCCTACTCTGGCCATGGATCCTTCTCTTCCCTGAATGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	GTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGAGAAACAGGTCTGCTCAGAATGCGGATaGGGTCACCCCGTTGGAAGG	+
Preference number: 4 (lower is better) Translates to: VGTQRGQEARSWLLEKQVCSECG*GHPVGR Trigger: CCTTCCAACGGGGTGACCTCATCCGCATTCTGAGCA...GACCTGTTTCTCAAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR GCA 90 bp	CTCACCTTGGGCTGGGAGCCGCGGTCTGGGAGGGAGTTTGTTTGCCAGGTCCTTCTGAGGTTCTCATTCTaGAAGCCTTCTGCCAGGAAG	+
Preference number: 4 (lower is better) Translates to: LTLGWEPRSGREFVCQVLLRFSF*KPSARK Trigger: CTTCCTGGCAGAAGGCTTGCAGAATGAGAACCTCAG...AAGGACCTGGCAAACAAACTCCCTCCCAGACCGCGGCTCCCAGCCCAAGGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
CDS-3UTR GCA 90 bp	ATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGAGAAACAGGGGCTCTCTGATCCTGTaGCCCAGGGCTGAGGTTCTC	+
Preference number: 4 (lower is better) Translates to: MWGHREGRKLEAGCLRNRGSLIL*PRAEVL Trigger: GAGAACCTCAGCCCTGGGGCACAGGATCAGAGAGCC...CCTGTTTCTCAAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	TGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAGCTCAGGCAAGGCCATaGCTCTGCACTGGGAGCCAG	+
Preference number: 4 (lower is better) Translates to: CSRLVGKAYGCGDTERAGAQARP*LCTGSQ Trigger: CTGGCTCCCAGTGCAGAGCCATGGCCTTGCCTGAGC...TCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCTACAAGCCTGCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	AGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTTCCGGCTGGTCACCATaGCAATCCCATAGGCCCTGG	+
Preference number: 4 (lower is better) Translates to: RLMDVGTQRGQEARSWLLSGWSP*QSHRPW Trigger: CCAGGGCCTATGGGATTGCCATGGTGACCAGCCGGA...AAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	TGTGGCACTGTCTTAGGAGCCCCACGTTATGCAATGGACCAAGAGCAGCCATCTCCTGTGCCCCAGGGCTaGGGTTCTCATTCTGCAAGC	+
Preference number: 4 (lower is better) Translates to: CGTVLGAPRYAMDQEQPSPVPQG*GSHSAS Trigger: GCTTGCAGAATGAGAACCTCAGCCCTGGGGCACAGG...AGATGGCTGCTCTTGGTCCATTGCATAACGTGGGGCTCCTAAGACAGTGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
CDS-3UTR TCA 90 bp	AGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGAATCTTTTCGCAGGTaGGGGGCCATCCGGACACTG	+
Preference number: 4 (lower is better) Translates to: RLMDVGTQRGQEARSWLLESFRR*GAIRTL Trigger: CAGTGTCCGGATGGCCCCTCACCTGCGAAAAGATTC...AAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR GCA 90 bp	CAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGGCTCTCTGATCCTGTaGCCCAGGGCTGAGGTTCTC	+
Preference number: 4 (lower is better) Translates to: QACRKGLWMWGHREGRKLGSLIL*PRAEVL Trigger: GAGAACCTCAGCCCTGGGGCACAGGATCAGAGAGCC...TAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCTACAAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	AGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTCATCAGAGCCGTCCTaGCCAAGGTCACCTCCTTGG	+
Preference number: 4 (lower is better) Translates to: RKGLWMWGHREGRKLEAGSSEPS*PRSPPW Trigger: CCAAGGAGGTGACCTTGGCCAGGACGGCTCTGATGA...GCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	TGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGATCCGGCTGGTCACCATaGCAATCCCATAGGCCCTGG	+
Preference number: 4 (lower is better) Translates to: CSRLVGKAYGCGDTERAGSGWSP*QSHRPW Trigger: CCAGGGCCTATGGGATTGCCATGGTGACCAGCCGGA...TCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCTACAAGCCTGCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	CTTGGCTCCATTCAGGGAAGAGAAGGATCCATGGCCAGAGTAGGGGACGGGAGTATGAGGTCACCCCGTTaGAAGGACAGTTCATCCGGC	+
Preference number: 4 (lower is better) Translates to: LGSIQGREGSMARVGDGSMRSPR*KDSSSG Trigger: GCCGGATGAACTGTCCTTCCAACGGGGTGACCTCAT...ACTCCCGTCCCCTACTCTGGCCATGGATCCTTCTCTTCCCTGAATGGAGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	CAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAATCTTTTCGCAGGTaGGGGGCCATCCGGACACTG	+
Preference number: 4 (lower is better) Translates to: QACRKGLWMWGHREGRKLESFRR*GAIRTL Trigger: CAGTGTCCGGATGGCCCCTCACCTGCGAAAAGATTC...TAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCTACAAGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	TGTGGCACTGTCTTAGGAGCCCCACGTTATGCAATGGACCAAGAGCAGCCATCTTCATCAGAGCCGTCCTaGCCAAGGTCACCTCCTTGG	+
Preference number: 4 (lower is better) Translates to: CGTVLGAPRYAMDQEQPSSSEPS*PRSPPW Trigger: CCAAGGAGGTGACCTTGGCCAGGACGGCTCTGATGA...AGATGGCTGCTCTTGGTCCATTGCATAACGTGGGGCTCCTAAGACAGTGCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
CDS-3UTR CCA 90 bp	TGTAGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTTCCGGCTGGTCACCATaGCAATCCCATAGGCCCTGG	+
Preference number: 4 (lower is better) Translates to: CRKGLWMWGHREGRKLEASGWSP*QSHRPW Trigger: CCAGGGCCTATGGGATTGCCATGGTGACCAGCCGGA...AGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
3UTR CAA 72 bp	CTGAGGCAGCACGCTTATTCGTATGAAGTTCTGTACTaGCTTTGGATGCTCACCTTGGGCTGGGAGCCGCGG	+
Preference number: 4 (lower is better) Translates to: LRQHAYSYEVLY*LWMLTLGWEPR Trigger: CCGCGGCTCCCAGCCCAAGGTGAGCATCCAAAGCAAGTACAGAACTTCATACGAATAAGCGTGCTGCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
CDS-3UTR TCA 90 bp	GTTCTGTACTTGCTTTGGATGCTCACCTTGGGCTGGGAGCCGCGGTCTGGGAGGAACAGTACCTGGATTTaGTTTGCTGGAAACCCCGAA	+
Preference number: 4 (lower is better) Translates to: VLYLLWMLTLGWEPRSGRNSTWI*FAGNPE Trigger: TTCGGGGTTTCCAGCAAATCAAATCCAGGTACTGTT...CCTCCCAGACCGCGGCTCCCAGCCCAAGGTGAGCATCCAAAGCAAGTACAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
CDS-3UTR TCA 90 bp	ACAGGCACCATCATCTCTTTCTACAGCCAAAATGGGCATAGAGAGACGCACCCTGTGAGGGGTGGGCCGTaGGTCCCACTCAGATTGTCA	+
Preference number: 4 (lower is better) Translates to: TGTIISFYSQNGHRETHPVRGGP*VPLRLS Trigger: TGACAATCTGAGTGGGACTCACGGCCCACCCCTCAC...AGGGTGCGTCTCTCTATGCCCATTTTGGCTGTAGAAAGAGATGATGGTGCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
CDS-3UTR TCA 90 bp	GGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGACGCTATCCAGCTCTTaGGCCCCTCTTAAGATGTCT	+
Preference number: 4 (lower is better) Translates to: GLWMWGHREGRKLEAGCLTLSSS*APLKMS Trigger: AGACATCTTAAGAGGGGCTCAAGAGCTGGATAGCGT...CAAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	GAGCGGCTGGTGCTGAGGCAGCACGCTTATTCGTATGAAGTTCTGTACTTGCTTTCATCAGAGCCGTCCTaGCCAAGGTCACCTCCTTGG	+
Preference number: 4 (lower is better) Translates to: ERLVLRQHAYSYEVLYLLSSEPS*PRSPPW Trigger: CCAAGGAGGTGACCTTGGCCAGGACGGCTCTGATGA...AAGCAAGTACAGAACTTCATACGAATAAGCGTGCTGCCTCAGCACCAGCCGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
CDS-3UTR CCA 90 bp	AGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGACAGTTCATCCGGCTaGTCACCATGGCAATCCCAT	+
Preference number: 4 (lower is better) Translates to: RLMDVGTQRGQEARSWLLDSSSG*SPWQSH Trigger: ATGGGATTGCCATGGTGACCAGCCGGATGAACTGTC...AAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	TGGGTATACATGTGGCACGGTACATGCACGGAGGTCAGAGGACAACATGTGGGTATGAGGTCACCCCGTTaGAAGGACAGTTCATCCGGC	+
Preference number: 4 (lower is better) Translates to: WVYMWHGTCTEVRGQHVGMRSPR*KDSSSG Trigger: GCCGGATGAACTGTCCTTCCAACGGGGTGACCTCAT...ACCCACATGTTGTCCTCTGACCTCCGTGCATGTACCGTGCCACATGTATACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR TCA 90 bp	ATCTCGCCAGCCCGTGATATTATGTCAGAAAGGAATTCAGCCCCACCATACAAGGTGAGGGGTGGGCCGTaGGTCCCACTCAGATTGTCA	+
Preference number: 4 (lower is better) Translates to: ISPARDIMSERNSAPPYKVRGGP*VPLRLS Trigger: TGACAATCTGAGTGGGACTCACGGCCCACCCCTCAC...CTTGTATGGTGGGGCTGAATTCCTTTCTGACATAATATCACGGGCTGGCGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR TCA 90 bp	CTTATTCGTATGAAGTTCTGTACTTGCTTTGGATGCTCACCTTGGGCTGGGAGCGTGAGGGGTGGGCCGTaGGTCCCACTCAGATTGTCA	+
Preference number: 4 (lower is better) Translates to: LIRMKFCTCFGCSPWAGSVRGGP*VPLRLS Trigger: TGACAATCTGAGTGGGACTCACGGCCCACCCCTCAC...GCTCCCAGCCCAAGGTGAGCATCCAAAGCAAGTACAGAACTTCATACGAATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
CDS-3UTR GCA 90 bp	AGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTTCTCCAGGTACCCTTaGTTGATGACGCTATCCAGC	+
Preference number: 4 (lower is better) Translates to: RKGLWMWGHREGRKLEAGFSRYP*LMTLSS Trigger: GCTGGATAGCGTCATCAAGCAAGGGTACCTGGAGAA...GCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR GCA 90 bp	TGTCTTCTTTGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACACAGAGGCAAGGCCATGGCTCTaGACTGGGAGCCAGACCTTG	+
Preference number: 4 (lower is better) Translates to: CLLCSRLVGKAYGCGDTEARPWL*TGSQTL Trigger: CAAGGTCTGGCTCCCAGTGCAGAGCCATGGCCTTGC...CTCTGTGTCCCCACATCCATAAGCCTTTCCTACAAGCCTGCTACAAAGAAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR GCA 90 bp	TATGAAGTTCTGTACTTGCTTTGGATGCTCACCTTGGGCTGGGAGCCGCGGTCTATGCAGCGAGTGATATaGGAGGCACCAGGAGGAAAG	+
Preference number: 4 (lower is better) Translates to: YEVLYLLWMLTLGWEPRSMQRVI*EAPGGK Trigger: CTTTCCTCCTGGTGCCTCGCATATCACTCGCTGCAT...AGACCGCGGCTCCCAGCCCAAGGTGAGCATCCAAAGCAAGTACAGAACTTCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
CDS-3UTR CCA 90 bp	ATACATGTGGCACGGTACATGCACGGAGGTCAGAGGACAACATGTGGGTCCTGGGAAGCAGCAGAGTCTTaGCTCCATTCAGGGAAGAGA	+
Preference number: 4 (lower is better) Translates to: IHVARYMHGGQRTTCGSWEAAES*LHSGKR Trigger: TCTCTTCCCTGAATGGAGCCAAGACTCTGCTGCTTC...CCAGGACCCACATGTTGTCCTCTGACCTCCGTGCATGTACCGTGCCACATGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
3UTR CAA 72 bp	CACCCTGTACTTCCCTTCCCCTCTTCATGGGCAAGTTaGCATAAGGATTTGTGGCACTGTCTTAGGAGCCCC	+
Preference number: 4 (lower is better) Translates to: HPVLPFPSSWAS*HKDLWHCLRSP Trigger: GGGGCTCCTAAGACAGTGCCACAAATCCTTATGCAAACTTGCCCATGAAGAGGGGAAGGGAAGTACAGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
CDS-3UTR TCA 90 bp	TGTCTTCTTTGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACACAGAGGAATCTTTTCGCAGGTaGGGGGCCATCCGGACACTG	+
Preference number: 4 (lower is better) Translates to: CLLCSRLVGKAYGCGDTEESFRR*GAIRTL Trigger: CAGTGTCCGGATGGCCCCTCACCTGCGAAAAGATTC...CTCTGTGTCCCCACATCCATAAGCCTTTCCTACAAGCCTGCTACAAAGAAGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	ATCTCGCCAGCCCGTGATATTATGTCAGAAAGGAATTCAGCCCCACCATACAAGTGCTCAGAATGCGGATaGGGTCACCCCGTTGGAAGG	+
Preference number: 4 (lower is better) Translates to: ISPARDIMSERNSAPPYKCSECG*GHPVGR Trigger: CCTTCCAACGGGGTGACCTCATCCGCATTCTGAGCA...CTTGTATGGTGGGGCTGAATTCCTTTCTGACATAATATCACGGGCTGGCGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR TCA 90 bp	TGTCTTCTTTGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACACAGAGTGCTCAGAATGCGGATaGGGTCACCCCGTTGGAAGG	+
Preference number: 4 (lower is better) Translates to: CLLCSRLVGKAYGCGDTECSECG*GHPVGR Trigger: CCTTCCAACGGGGTGACCTCATCCGCATTCTGAGCA...CTCTGTGTCCCCACATCCATAAGCCTTTCCTACAAGCCTGCTACAAAGAAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	TGTGGGTATACATGTGGCACGGTACATGCACGGAGGTCAGAGGACAACATGTGGGGGGACGGGAGTTTCTaGTGGTCTGAGAATATGTTC	+
Preference number: 4 (lower is better) Translates to: CGYTCGTVHARRSEDNMWGDGSF*WSENMF Trigger: GAACATATTCTCAGACCATCAGAAACTCCCGTCCCC...CCACATGTTGTCCTCTGACCTCCGTGCATGTACCGTGCCACATGTATACCCACA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR GCA 90 bp	TGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGACTGAGGTTCTCATTCTaGAAGCCTTCTGCCAGGAAG	+
Preference number: 4 (lower is better) Translates to: CSRLVGKAYGCGDTERAGLRFSF*KPSARK Trigger: CTTCCTGGCAGAAGGCTTGCAGAATGAGAACCTCAG...TCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCTACAAGCCTGCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR GCA 90 bp	GCTGGCAGATGGTCTCCGCTGGATCAAACACAGAAGAAATGCCCCCACTGTTTCCTGAGGTTCTCATTCTaGAAGCCTTCTGCCAGGAAG	+
Preference number: 4 (lower is better) Translates to: AGRWSPLDQTQKKCPHCFLRFSF*KPSARK Trigger: CTTCCTGGCAGAAGGCTTGCAGAATGAGAACCTCAG...GAAACAGTGGGGGCATTTCTTCTGTGTTTGATCCAGCGGAGACCATCTGCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
CDS-3UTR GCA 90 bp	TGGGTATACATGTGGCACGGTACATGCACGGAGGTCAGAGGACAACATGTGGGTTTCTCCAGGTACCCTTaGTTGATGACGCTATCCAGC	+
Preference number: 4 (lower is better) Translates to: WVYMWHGTCTEVRGQHVGFSRYP*LMTLSS Trigger: GCTGGATAGCGTCATCAAGCAAGGGTACCTGGAGAA...ACCCACATGTTGTCCTCTGACCTCCGTGCATGTACCGTGCCACATGTATACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR GCA 90 bp	TGTGGCACGGTACATGCACGGAGGTCAGAGGACAACATGTGGGTCCTGGGGCCTAGAAGCTATGATCTTTaGTTTTCTTCTCCAGGTACC	+
Preference number: 4 (lower is better) Translates to: CGTVHARRSEDNMWVLGPRSYDL*FSSPGT Trigger: GGTACCTGGAGAAGAAAAGCAAAGATCATAGCTTCT...AGGCCCCAGGACCCACATGTTGTCCTCTGACCTCCGTGCATGTACCGTGCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR CCA 90 bp	GTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGAGAAACAGGTCCTGGATTTGATTTGCTaGAAACCCCGAAGAATGTGG	+
Preference number: 4 (lower is better) Translates to: VGTQRGQEARSWLLEKQVLDLIC*KPRRMW Trigger: CCACATTCTTCGGGGTTTCCAGCAAATCAAATCCAG...GACCTGTTTCTCAAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	CTTGGCTCCATTCAGGGAAGAGAAGGATCCATGGCCAGAGTAGGGGACGGGAGTCTGGATTTGATTTGCTaGAAACCCCGAAGAATGTGG	+
Preference number: 4 (lower is better) Translates to: LGSIQGREGSMARVGDGSLDLIC*KPRRMW Trigger: CCACATTCTTCGGGGTTTCCAGCAAATCAAATCCAG...ACTCCCGTCCCCTACTCTGGCCATGGATCCTTCTCTTCCCTGAATGGAGCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	ACAGGGTACAGGCACACCTTTGCTGAGGGCTCTGGCAGACAGGGTGAAGACACTCTGGATTTGATTTGCTaGAAACCCCGAAGAATGTGG	+
Preference number: 4 (lower is better) Translates to: TGYRHTFAEGSGRQGEDTLDLIC*KPRRMW Trigger: CCACATTCTTCGGGGTTTCCAGCAAATCAAATCCAG...AGTGTCTTCACCCTGTCTGCCAGAGCCCTCAGCAAAGGTGTGCCTGTACCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
CDS-3UTR CCA 90 bp	CTTCGTTGCTGTCTTCTTTGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGTCATCAGAGCCGTCCTaGCCAAGGTCACCTCCTTGG	+
Preference number: 4 (lower is better) Translates to: LRCCLLCSRLVGKAYGCGSSEPS*PRSPPW Trigger: CCAAGGAGGTGACCTTGGCCAGGACGGCTCTGATGA...CCCACATCCATAAGCCTTTCCTACAAGCCTGCTACAAAGAAGACAGCAACGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	TGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGAGAAACAGGTCTGTCTCTGGCTTCAGCTaGACTAGAAGCTGTAAACTC	+
Preference number: 4 (lower is better) Translates to: WGHREGRKLEAGCLRNRSVSGFS*TRSCKL Trigger: GAGTTTACAGCTTCTAGTCCAGCTGAAGCCAGAGAC...AGACCTGTTTCTCAAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	TACGTCATCAAGTTTCTGAACATGGTTCATATCTGTTTCATCCCCGGGTCTCACCCTGTGCCCCAGGGCTaGGGTTCTCATTCTGCAAGC	+
Preference number: 4 (lower is better) Translates to: YVIKFLNMVHICFIPGSHPVPQG*GSHSAS Trigger: GCTTGCAGAATGAGAACCTCAGCCCTGGGGCACAGG...GTGAGACCCGGGGATGAAACAGATATGAACCATGTTCAGAAACTTGATGACGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
CDS-3UTR TCA 90 bp	TTATTTATTCATGTGTGTGGGTATACATGTGGCACGGTACATGCACGGAGGTCACCTGTGCCCCAGGGCTaGGGTTCTCATTCTGCAAGC	+
Preference number: 4 (lower is better) Translates to: LFIHVCGYTCGTVHARRSPVPQG*GSHSAS Trigger: GCTTGCAGAATGAGAACCTCAGCCCTGGGGCACAGG...TGACCTCCGTGCATGTACCGTGCCACATGTATACCCACACACATGAATAAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR TCA 90 bp	AGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCAACAGTACCTGGATTTaGTTTGCTGGAAACCCCGAA	+
Preference number: 4 (lower is better) Translates to: RKGLWMWGHREGRKLEAGNSTWI*FAGNPE Trigger: TTCGGGGTTTCCAGCAAATCAAATCCAGGTACTGTT...GCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	ATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGAGAAACAGGAACAGTACCTGGATTTaGTTTGCTGGAAACCCCGAA	+
Preference number: 4 (lower is better) Translates to: MWGHREGRKLEAGCLRNRNSTWI*FAGNPE Trigger: TTCGGGGTTTCCAGCAAATCAAATCCAGGTACTGTT...CCTGTTTCTCAAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	TTCCTTCGTTGCTGTCTTCTTTGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGTGAGGGGTGGGCCGTaGGTCCCACTCAGATTGTCA	+
Preference number: 4 (lower is better) Translates to: FLRCCLLCSRLVGKAYGCVRGGP*VPLRLS Trigger: TGACAATCTGAGTGGGACTCACGGCCCACCCCTCAC...ACATCCATAAGCCTTTCCTACAAGCCTGCTACAAAGAAGACAGCAACGAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	CTTCGTTGCTGTCTTCTTTGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGATGAGGTCACCCCGTTaGAAGGACAGTTCATCCGGC	+
Preference number: 4 (lower is better) Translates to: LRCCLLCSRLVGKAYGCGMRSPR*KDSSSG Trigger: GCCGGATGAACTGTCCTTCCAACGGGGTGACCTCAT...CCCACATCCATAAGCCTTTCCTACAAGCCTGCTACAAAGAAGACAGCAACGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
3UTR CAA 72 bp	GGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTaGAGAAACAGGTCTGATGAACTGTCTTCTTCCTAC	+
Preference number: 4 (lower is better) Translates to: GHREGRKLEAGC*RNRSDELSSSY Trigger: GTAGGAAGAAGACAGTTCATCAGACCTGTTTCTCAAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
3UTR CAA 72 bp	GTGAGAACCTGGACTCGGAATGTGAAGCTGTCCGTCTaGAGGAGAGGAGGAGGTTTCACAAACAGCCACAAA	+
Preference number: 4 (lower is better) Translates to: VRTWTRNVKLSV*RRGGGFTNSHK Trigger: TTTGTGGCTGTTTGTGAAACCTCCTCCTCTCCTCAAGACGGACAGCTTCACATTCCGAGTCCAGGTTCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
CDS-3UTR TCA 90 bp	GGAAACATATCCAGACTTTATTTCTGCTTTGCAAGCCACAACCCATCAGTAACCCCTGTGCCCCAGGGCTaGGGTTCTCATTCTGCAAGC	+
Preference number: 4 (lower is better) Translates to: GNISRLYFCFASHNPSVTPVPQG*GSHSAS Trigger: GCTTGCAGAATGAGAACCTCAGCCCTGGGGCACAGG...GGTTACTGATGGGTTGTGGCTTGCAAAGCAGAAATAAAGTCTGGATATGTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	TATACATGTGGCACGGTACATGCACGGAGGTCAGAGGACAACATGTGGGTCCTGAACAGTACCTGGATTTaGTTTGCTGGAAACCCCGAA	+
Preference number: 4 (lower is better) Translates to: YTCGTVHARRSEDNMWVLNSTWI*FAGNPE Trigger: TTCGGGGTTTCCAGCAAATCAAATCCAGGTACTGTT...CAGGACCCACATGTTGTCCTCTGACCTCCGTGCATGTACCGTGCCACATGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR TCA 90 bp	TGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGAGAAACAGGTCTGACCCAAAGAAGCTATaGTCTTTGCTTTTCTTCTCC	+
Preference number: 4 (lower is better) Translates to: WGHREGRKLEAGCLRNRSDPKKL*SLLFFS Trigger: GGAGAAGAAAAGCAAAGATCATAGCTTCTTTGGGTC...AGACCTGTTTCTCAAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	CAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTATTGGAACAATTCCAATaGCGCTGTTCAGCTCTCCTA	+
Preference number: 4 (lower is better) Translates to: QACRKGLWMWGHREGRKLLEQFQ*RCSALL Trigger: TAGGAGAGCTGAACAGCGTCATTGGAATTGTTCCAA...TAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCTACAAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	TATACATGTGGCACGGTACATGCACGGAGGTCAGAGGACAACATGTGGGTCCTGGAGTTTCTGATGGTCTaGGAATATGTTCCCTTGCTC	+
Preference number: 4 (lower is better) Translates to: YTCGTVHARRSEDNMWVLEFLMV*EYVPLL Trigger: GAGCAAGGGAACATATTCTCAGACCATCAGAAACTC...CAGGACCCACATGTTGTCCTCTGACCTCCGTGCATGTACCGTGCCACATGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR GCA 90 bp	GAGGAGGAAGAAAAAGACCCTTATGCTCTGCTTAATTTCCCTTCAGCCATCTTTGGCTCTCTGATCCTGTaGCCCAGGGCTGAGGTTCTC	+
Preference number: 4 (lower is better) Translates to: EEEEKDPYALLNFPSAIFGSLIL*PRAEVL Trigger: GAGAACCTCAGCCCTGGGGCACAGGATCAGAGAGCC...AAAGATGGCTGAAGGGAAATTAAGCAGAGCATAAGGGTCTTTTTCTTCCTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
CDS-3UTR GCA 90 bp	GGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGAGAAGCTATGATCTTTaGTTTTCTTCTCCAGGTACC	+
Preference number: 4 (lower is better) Translates to: GLWMWGHREGRKLEAGCLRSYDL*FSSPGT Trigger: GGTACCTGGAGAAGAAAAGCAAAGATCATAGCTTCT...CAAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	CCCATGGAACCATCTCGCCAGCCCGTGATATTATGTCAGAAAGGAATTCAGCCCGTCTCTGGCTTCAGCTaGACTAGAAGCTGTAAACTC	+
Preference number: 4 (lower is better) Translates to: PMEPSRQPVILCQKGIQPVSGFS*TRSCKL Trigger: GAGTTTACAGCTTCTAGTCCAGCTGAAGCCAGAGAC...GGGCTGAATTCCTTTCTGACATAATATCACGGGCTGGCGAGATGGTTCCATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR CCA 90 bp	CTTCGTTGCTGTCTTCTTTGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACAGTTCATCCGGCTaGTCACCATGGCAATCCCAT	+
Preference number: 4 (lower is better) Translates to: LRCCLLCSRLVGKAYGCGDSSSG*SPWQSH Trigger: ATGGGATTGCCATGGTGACCAGCCGGATGAACTGTC...CCCACATCCATAAGCCTTTCCTACAAGCCTGCTACAAAGAAGACAGCAACGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	GAAACAGGTCTGATGAACTGTCTTCTTCCTACTCATCTTATCAGTGGCTTAAAGGTGAGGGGTGGGCCGTaGGTCCCACTCAGATTGTCA	+
Preference number: 4 (lower is better) Translates to: ETGLMNCLLPTHLISGLKVRGGP*VPLRLS Trigger: TGACAATCTGAGTGGGACTCACGGCCCACCCCTCAC...CTTTAAGCCACTGATAAGATGAGTAGGAAGAAGACAGTTCATCAGACCTGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	CTTCGTTGCTGTCTTCTTTGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGACGCTATCCAGCTCTTaGGCCCCTCTTAAGATGTCT	+
Preference number: 4 (lower is better) Translates to: LRCCLLCSRLVGKAYGCGTLSSS*APLKMS Trigger: AGACATCTTAAGAGGGGCTCAAGAGCTGGATAGCGT...CCCACATCCATAAGCCTTTCCTACAAGCCTGCTACAAAGAAGACAGCAACGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	CAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGACCCAAAGAAGCTATaGTCTTTGCTTTTCTTCTCC	+
Preference number: 4 (lower is better) Translates to: QACRKGLWMWGHREGRKLDPKKL*SLLFFS Trigger: GGAGAAGAAAAGCAAAGATCATAGCTTCTTTGGGTC...TAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCTACAAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR GCA 90 bp	TTAAGTTTCACAGAAGGAAATAATACACCGTGTTTGTGTCCATTGGCTCTGGCTGGCTCTCTGATCCTGTaGCCCAGGGCTGAGGTTCTC	+
Preference number: 4 (lower is better) Translates to: LSFTEGNNTPCLCPLALAGSLIL*PRAEVL Trigger: GAGAACCTCAGCCCTGGGGCACAGGATCAGAGAGCC...AGCCAGAGCCAATGGACACAAACACGGTGTATTATTTCCTTCTGTGAAACTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
CDS-3UTR GCA 90 bp	GAAACAGGTCTGATGAACTGTCTTCTTCCTACTCATCTTATCAGTGGCTTAAAGGGCTCTCTGATCCTGTaGCCCAGGGCTGAGGTTCTC	+
Preference number: 4 (lower is better) Translates to: ETGLMNCLLPTHLISGLKGSLIL*PRAEVL Trigger: GAGAACCTCAGCCCTGGGGCACAGGATCAGAGAGCC...CTTTAAGCCACTGATAAGATGAGTAGGAAGAAGACAGTTCATCAGACCTGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
CDS-3UTR GCA 90 bp	CTTCGTTGCTGTCTTCTTTGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGTTCTCCAGGTACCCTTaGTTGATGACGCTATCCAGC	+
Preference number: 4 (lower is better) Translates to: LRCCLLCSRLVGKAYGCGFSRYP*LMTLSS Trigger: GCTGGATAGCGTCATCAAGCAAGGGTACCTGGAGAA...CCCACATCCATAAGCCTTTCCTACAAGCCTGCTACAAAGAAGACAGCAACGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR GCA 90 bp	AGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTAGAAGCTATGATCTTTaGTTTTCTTCTCCAGGTACC	+
Preference number: 4 (lower is better) Translates to: RLMDVGTQRGQEARSWLLRSYDL*FSSPGT Trigger: GGTACCTGGAGAAGAAAAGCAAAGATCATAGCTTCT...AAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	ACAGGCACCATCATCTCTTTCTACAGCCAAAATGGGCATAGAGAGACGCACCCTAACAGTACCTGGATTTaGTTTGCTGGAAACCCCGAA	+
Preference number: 4 (lower is better) Translates to: TGTIISFYSQNGHRETHPNSTWI*FAGNPE Trigger: TTCGGGGTTTCCAGCAAATCAAATCCAGGTACTGTT...AGGGTGCGTCTCTCTATGCCCATTTTGGCTGTAGAAAGAGATGATGGTGCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
CDS-3UTR TCA 90 bp	TGTGTGTGGGTATACATGTGGCACGGTACATGCACGGAGGTCAGAGGACAACATGACCCAAAGAAGCTATaGTCTTTGCTTTTCTTCTCC	+
Preference number: 4 (lower is better) Translates to: CVWVYMWHGTCTEVRGQHDPKKL*SLLFFS Trigger: GGAGAAGAAAAGCAAAGATCATAGCTTCTTTGGGTC...ATGTTGTCCTCTGACCTCCGTGCATGTACCGTGCCACATGTATACCCACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR CCA 90 bp	CAAGGAAACATATCCAGACTTTATTTCTGCTTTGCAAGCCACAACCCATCAGTATCATCAGAGCCGTCCTaGCCAAGGTCACCTCCTTGG	+
Preference number: 4 (lower is better) Translates to: QGNISRLYFCFASHNPSVSSEPS*PRSPPW Trigger: CCAAGGAGGTGACCTTGGCCAGGACGGCTCTGATGA...TACTGATGGGTTGTGGCTTGCAAAGCAGAAATAAAGTCTGGATATGTTTCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR TCA 90 bp	GAATTCAGCCCCACCATACAAGGCAAGGAAACATATCCAGACTTTATTTCTGCTACGCTATCCAGCTCTTaGGCCCCTCTTAAGATGTCT	+
Preference number: 4 (lower is better) Translates to: EFSPTIQGKETYPDFISATLSSS*APLKMS Trigger: AGACATCTTAAGAGGGGCTCAAGAGCTGGATAGCGT...AGCAGAAATAAAGTCTGGATATGTTTCCTTGCCTTGTATGGTGGGGCTGAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR GCA 90 bp	CGTGATATTATGTCAGAAAGGAATTCAGCCCCACCATACAAGGCAAGGAAACATCTGAGGTTCTCATTCTaGAAGCCTTCTGCCAGGAAG	+
Preference number: 4 (lower is better) Translates to: RDIMSERNSAPPYKARKHLRFSF*KPSARK Trigger: CTTCCTGGCAGAAGGCTTGCAGAATGAGAACCTCAG...ATGTTTCCTTGCCTTGTATGGTGGGGCTGAATTCCTTTCTGACATAATATCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR CCA 90 bp	ATTTATTCATGTGTGTGGGTATACATGTGGCACGGTACATGCACGGAGGTCAGACTGGATTTGATTTGCTaGAAACCCCGAAGAATGTGG	+
Preference number: 4 (lower is better) Translates to: IYSCVWVYMWHGTCTEVRLDLIC*KPRRMW Trigger: CCACATTCTTCGGGGTTTCCAGCAAATCAAATCCAG...TCTGACCTCCGTGCATGTACCGTGCCACATGTATACCCACACACATGAATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR CCA 90 bp	CTTCGTTGCTGTCTTCTTTGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGAGCAGGATTCTTTCTTaGAATCTTTTCGCAGGTGAG	+
Preference number: 4 (lower is better) Translates to: LRCCLLCSRLVGKAYGCGSRILS*NLFAGE Trigger: CTCACCTGCGAAAAGATTCCAAGAAAGAATCCTGCT...CCCACATCCATAAGCCTTTCCTACAAGCCTGCTACAAAGAAGACAGCAACGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	GAAACAGGTCTGATGAACTGTCTTCTTCCTACTCATCTTATCAGTGGCTTAAAGGACAGTTCATCCGGCTaGTCACCATGGCAATCCCAT	+
Preference number: 4 (lower is better) Translates to: ETGLMNCLLPTHLISGLKDSSSG*SPWQSH Trigger: ATGGGATTGCCATGGTGACCAGCCGGATGAACTGTC...CTTTAAGCCACTGATAAGATGAGTAGGAAGAAGACAGTTCATCAGACCTGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
CDS-3UTR GCA 90 bp	CTTTCCAGAATTGTAGGTCCTGATTCTCACATATACCATTCTCTGATCTCAAGGCTGAGGTTCTCATTCTaGAAGCCTTCTGCCAGGAAG	+
Preference number: 4 (lower is better) Translates to: LSRIVGPDSHIYHSLISRLRFSF*KPSARK Trigger: CTTCCTGGCAGAAGGCTTGCAGAATGAGAACCTCAG...CCTTGAGATCAGAGAATGGTATATGTGAGAATCAGGACCTACAATTCTGGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
CDS-3UTR CCA 90 bp	GGAAACATATCCAGACTTTATTTCTGCTTTGCAAGCCACAACCCATCAGTAACCGTCTCTGGCTTCAGCTaGACTAGAAGCTGTAAACTC	+
Preference number: 4 (lower is better) Translates to: GNISRLYFCFASHNPSVTVSGFS*TRSCKL Trigger: GAGTTTACAGCTTCTAGTCCAGCTGAAGCCAGAGAC...GGTTACTGATGGGTTGTGGCTTGCAAAGCAGAAATAAAGTCTGGATATGTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
3UTR CAA 72 bp	TTCACAGAAGGAAATAATACACCGTGTTTGTGTCCATaGGCTCTGGCTTTCACTTCCAACAGTGAGCGTGTA	+
Preference number: 4 (lower is better) Translates to: FTEGNNTPCLCP*ALAFTSNSERV Trigger: TACACGCTCACTGTTGGAAGTGAAAGCCAGAGCCAATGGACACAAACACGGTGTATTATTTCCTTCTGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
3UTR CAA 72 bp	AAGGAAAATAACGAAGTGCTCCAGAGGGACCTAATTTaGTTGCCTAGGAATAGAGCGATGAGCTGGAACAAG	+
Preference number: 4 (lower is better) Translates to: KENNEVLQRDLI*LPRNRAMSWNK Trigger: CTTGTTCCAGCTCATCGCTCTATTCCTAGGCAACAAAATTAGGTCCCTCTGGAGCACTTCGTTATTTTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
CDS-3UTR TCA 90 bp	GGAAACATATCCAGACTTTATTTCTGCTTTGCAAGCCACAACCCATCAGTAACCTTTCAAAGGCGGTGGTaGGATAGTCCTTTGGAACAA	+
Preference number: 4 (lower is better) Translates to: GNISRLYFCFASHNPSVTFQRRW*DSPLEQ Trigger: TTGTTCCAAAGGACTATCTCACCACCGCCTTTGAAA...GGTTACTGATGGGTTGTGGCTTGCAAAGCAGAAATAAAGTCTGGATATGTTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
3UTR CAA 72 bp	ATATACCATTCTCTGATCTCAAGGGGGAACCACCATTaGAGTAAAGCTACACTTTCCCCATCTGTAAGATGG	+
Preference number: 4 (lower is better) Translates to: IYHSLISRGNHH*SKATLSPSVRW Trigger: CCATCTTACAGATGGGGAAAGTGTAGCTTTACTCAAATGGTGGTTCCCCCTTGAGATCAGAGAATGGTATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
CDS-3UTR TCA 90 bp	GAAACAGGTCTGATGAACTGTCTTCTTCCTACTCATCTTATCAGTGGCTTAAAGTTTCAAAGGCGGTGGTaGGATAGTCCTTTGGAACAA	+
Preference number: 4 (lower is better) Translates to: ETGLMNCLLPTHLISGLKFQRRW*DSPLEQ Trigger: TTGTTCCAAAGGACTATCTCACCACCGCCTTTGAAA...CTTTAAGCCACTGATAAGATGAGTAGGAAGAAGACAGTTCATCAGACCTGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
CDS-3UTR CCA 90 bp	TTAAGTTTCACAGAAGGAAATAATACACCGTGTTTGTGTCCATTGGCTCTGGCTCTGGATTTGATTTGCTaGAAACCCCGAAGAATGTGG	+
Preference number: 4 (lower is better) Translates to: LSFTEGNNTPCLCPLALALDLIC*KPRRMW Trigger: CCACATTCTTCGGGGTTTCCAGCAAATCAAATCCAG...AGCCAGAGCCAATGGACACAAACACGGTGTATTATTTCCTTCTGTGAAACTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
CDS-3UTR CCA 90 bp	GAATTCAGCCCCACCATACAAGGCAAGGAAACATATCCAGACTTTATTTCTGCTAGCAGGATTCTTTCTTaGAATCTTTTCGCAGGTGAG	+
Preference number: 4 (lower is better) Translates to: EFSPTIQGKETYPDFISASRILS*NLFAGE Trigger: CTCACCTGCGAAAAGATTCCAAGAAAGAATCCTGCT...AGCAGAAATAAAGTCTGGATATGTTTCCTTGCCTTGTATGGTGGGGCTGAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR GCA 90 bp	CACAAAGTTCAAAAAGAGCAGAAATTACCGCTTGTTTTTGTTCATTTGGCTGCACATTTTCTAGATGCCTaGGAGCTGTCAAGAAGCCGA	+
Preference number: 4 (lower is better) Translates to: HKVQKEQKLPLVFVHLAAHFLDA*ELSRSR Trigger: TCGGCTTCTTGACAGCTCGCAGGCATCTAGAAAATG...TGCAGCCAAATGAACAAAAACAAGCGGTAATTTCTGCTCTTTTTGAACTTTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
CDS-3UTR CCA 90 bp	AGAAACAGGTCTGATGAACTGTCTTCTTCCTACTCATCTTATCAGTGGCTTAAAAGCAGGATTCTTTCTTaGAATCTTTTCGCAGGTGAG	+
Preference number: 4 (lower is better) Translates to: RNRSDELSSSYSSYQWLKSRILS*NLFAGE Trigger: CTCACCTGCGAAAAGATTCCAAGAAAGAATCCTGCT...TTTAAGCCACTGATAAGATGAGTAGGAAGAAGACAGTTCATCAGACCTGTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
3UTR CAA 72 bp	CAAAAAGAGCAGAAATTACCGCTTGTTTTTGTTCATTaGGCTGCAATGCTCCCTTCTTATGGCCTATCAAAC	+
Preference number: 4 (lower is better) Translates to: QKEQKLPLVFVH*AAMLPSYGLSN Trigger: GTTTGATAGGCCATAAGAAGGGAGCATTGCAGCCAAATGAACAAAAACAAGCGGTAATTTCTGCTCTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
3UTR CAA 72 bp	AAATACACAAAGTTCAAAAAGAGCAGAAATTACCGCTaGTTTTTGTTCATTTGGCTGCAATGCTCCCTTCTT	+
Preference number: 4 (lower is better) Translates to: KYTKFKKSRNYR*FLFIWLQCSLL Trigger: AAGAAGGGAGCATTGCAGCCAAATGAACAAAAACAAGCGGTAATTTCTGCTCTTTTTGAACTTTGTGTATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
CDS-3UTR CAA 90 bp	TGTGGCACGGTACATGCACGGAGGTCAGAGGACAACATGTGGGTCCTGGGGCCTGCCAAGGTCACCTCCTaGGGGCTGAAAATCCCAACA	+
Preference number: 5 (lower is better) Translates to: CGTVHARRSEDNMWVLGPAKVTS*GLKIPT Trigger: TGTTGGGATTTTCAGCCCCAAGGAGGTGACCTTGGC...AGGCCCCAGGACCCACATGTTGTCCTCTGACCTCCGTGCATGTACCGTGCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR CAA 90 bp	AGTTCTGTACTTGCTTTGGATGCTCACCTTGGGCTGGGAGCCGCGGTCTGGGAGGCCAAGGTCACCTCCTaGGGGCTGAAAATCCCAACA	+
Preference number: 5 (lower is better) Translates to: SSVLALDAHLGLGAAVWEAKVTS*GLKIPT Trigger: TGTTGGGATTTTCAGCCCCAAGGAGGTGACCTTGGC...CTCCCAGACCGCGGCTCCCAGCCCAAGGTGAGCATCCAAAGCAAGTACAGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
CDS-3UTR CAA 90 bp	GTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGAGAAACAGGTCACTGGGAGCCAGACCTaGGGGAGTCAAAGCCATCGA	+
Preference number: 5 (lower is better) Translates to: VGTQRGQEARSWLLEKQVTGSQT*GSQSHR Trigger: TCGATGGCTTTGACTCCCCAAGGTCTGGCTCCCAGT...GACCTGTTTCTCAAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS CCA 90 bp	TCCTCCTCTTTCTCAGTAGGCTCAGGCAAGGCCATGGCTCTGCACTaGGAGCCAGACCTTGGGGAGTCAAAGCCATCGACGTCATTGTAC	+
Preference number: 5 (lower is better) Translates to: SSSFSVGSGKAMALH*EPDLGESKPSTSLY Trigger: GTACAATGACGTCGATGGCTTTGACTCCCCAAGGTCTGGCTCCCAGTGCAGAGCCATGGCCTTGCCTGAGCCTACTGAGAAAGAGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CAA 90 bp	GTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGAGAAACAGGTCGCCAAGGTCACCTCCTaGGGGCTGAAAATCCCAACA	+
Preference number: 5 (lower is better) Translates to: VGTQRGQEARSWLLEKQVAKVTS*GLKIPT Trigger: TGTTGGGATTTTCAGCCCCAAGGAGGTGACCTTGGC...GACCTGTTTCTCAAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CAA 90 bp	CTCCATTCAGGGAAGAGAAGGATCCATGGCCAGAGTAGGGGACGGGAGTTTCTGACTGGGAGCCAGACCTaGGGGAGTCAAAGCCATCGA	+
Preference number: 5 (lower is better) Translates to: LHSGKRRIHGQSRGREFLTGSQT*GSQSHR Trigger: TCGATGGCTTTGACTCCCCAAGGTCTGGCTCCCAGT...CAGAAACTCCCGTCCCCTACTCTGGCCATGGATCCTTCTCTTCCCTGAATGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
CDS-3UTR CAA 90 bp	AGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGATGAGGTCACCCCGTaGGAAGGACAGTTCATCCGG	+
Preference number: 5 (lower is better) Translates to: RLMDVGTQRGQEARSWLLDEVTP*EGQFIR Trigger: CCGGATGAACTGTCCTTCCAACGGGGTGACCTCATC...AAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CAA 90 bp	AGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCGCCAAGGTCACCTCCTaGGGGCTGAAAATCCCAACA	+
Preference number: 5 (lower is better) Translates to: RKGLWMWGHREGRKLEAGAKVTS*GLKIPT Trigger: TGTTGGGATTTTCAGCCCCAAGGAGGTGACCTTGGC...GCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CAA 90 bp	GTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTGAGAAACAGGTCTCCAGGTACCCTTGCTaGATGACGCTATCCAGCTCT	+
Preference number: 5 (lower is better) Translates to: VGTQRGQEARSWLLEKQVSRYPC*MTLSSS Trigger: AGAGCTGGATAGCGTCATCAAGCAAGGGTACCTGGA...GACCTGTTTCTCAAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS TCA 90 bp	GATGACCCTCGTCCTGATAATCTGACCAAAAGGATGCTTCTGACGTaGGGGGTGGGCCGTGAGTCCCACTCAGATTGTCATCAGAGCCGT	+
Preference number: 5 (lower is better) Translates to: DDPRPDNLTKRMLLT*GVGRESHSDCHQSR Trigger: ACGGCTCTGATGACAATCTGAGTGGGACTCACGGCCCACCCCTCACGTCAGAAGCATCCTTTTGGTCAGATTATCAGGACGAGGGTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
CDS-3UTR CAA 90 bp	AGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCTGCTTCTTCTCCAGGTACCCTaGCTTGATGACGCTATCCAG	+
Preference number: 5 (lower is better) Translates to: RLMDVGTQRGQEARSWLLLLQVP*LDDAIQ Trigger: CTGGATAGCGTCATCAAGCAAGGGTACCTGGAGAAG...AAGCAGCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CAA 90 bp	CAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGGAAGCAGCAGAGTCTaGGCTCCATTCAGGGAAGAG	+
Preference number: 5 (lower is better) Translates to: QACRKGLWMWGHREGRKLGSSRV*APFREE Trigger: CTCTTCCCTGAATGGAGCCAAGACTCTGCTGCTTCC...TAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCTACAAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS TCA 90 bp	CTATTCCCTCGTCCTGATAATCTGACCAAAAGGATGCTTCTGACGTaGGGGGTGGGCCGTGAGTCCCACTCAGATTGTCATCAGAGCCGT	+
Preference number: 5 (lower is better) Translates to: LFPRPDNLTKRMLLT*GVGRESHSDCHQSR Trigger: ACGGCTCTGATGACAATCTGAGTGGGACTCACGGCCCACCCCTCACGTCAGAAGCATCCTTTTGGTCAGATTATCAGGACGAGGGAATAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS TCA 90 bp	CAGCTGGATTTGATTTGCTGGAAACCCCGAAGAATGTGGGCTCTCTaGTCCTGTGCCCCAGGGCTGAGGTTCTCATTCTGCAAGCCTTCT	+
Preference number: 5 (lower is better) Translates to: QLDLICWKPRRMWAL*SCAPGLRFSFCKPS Trigger: AGAAGGCTTGCAGAATGAGAACCTCAGCCCTGGGGCACAGGATCAGAGAGCCCACATTCTTCGGGGTTTCCAGCAAATCAAATCCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
CDS CCA 90 bp	TACATGTTGTACTCCTTGCTCAGAATGCGGATGAGGTCACCCCGTTaGAAGGACAGTTCATCCGGCTGGTCACCATGGCAATCCCATAGG	+
Preference number: 5 (lower is better) Translates to: YMLYSLLRMRMRSPR*KDSSSGWSPWQSHR Trigger: CCTATGGGATTGCCATGGTGACCAGCCGGATGAACTGTCCTTCCAACGGGGTGACCTCATCCGCATTCTGAGCAAGGAGTACAACATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
CDS TCA 90 bp	TACCTGGATTTGATTTGCTGGAAACCCCGAAGAATGTGGGCTCTCTaGTCCTGTGCCCCAGGGCTGAGGTTCTCATTCTGCAAGCCTTCT	+
Preference number: 5 (lower is better) Translates to: YLDLICWKPRRMWAL*SCAPGLRFSFCKPS Trigger: AGAAGGCTTGCAGAATGAGAACCTCAGCCCTGGGGCACAGGATCAGAGAGCCCACATTCTTCGGGGTTTCCAGCAAATCAAATCCAGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11 ENSMUST00000107662.9 ENSMUST00000107663.4
CDS TCA 90 bp	AGATTGTCATCAGAGCCGTCCTGGCCAAGGTCACCTCCTTGGGGCTaGAAATCCCAACAGTACCTGGATTTGATTTGCTGGAAACCCCGA	+
Preference number: 5 (lower is better) Translates to: RLSSEPSWPRSPPWG*KSQQYLDLICWKPR Trigger: TCGGGGTTTCCAGCAAATCAAATCCAGGTACTGTTGGGATTTTCAGCCCCAAGGAGGTGACCTTGGCCAGGACGGCTCTGATGACAATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11 ENSMUST00000107662.9 ENSMUST00000107663.4
CDS TCA 90 bp	ATCTTTCCTCGTCCTGATAATCTGACCAAAAGGATGCTTCTGACGTaGGGGGTGGGCCGTGAGTCCCACTCAGATTGTCATCAGAGCCGT	+
Preference number: 5 (lower is better) Translates to: IFPRPDNLTKRMLLT*GVGRESHSDCHQSR Trigger: ACGGCTCTGATGACAATCTGAGTGGGACTCACGGCCCACCCCTCACGTCAGAAGCATCCTTTTGGTCAGATTATCAGGACGAGGAAAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
CDS-3UTR CAA 90 bp	TGGGGCCTGAACTCAGGTCATCAGGCCTGGCAGCAGGTGCTCTTACCCATGGAAAAGCCATCGACGTCATaGTACATTTCTTCCTCTTCT	+
Preference number: 5 (lower is better) Translates to: WGLNSGHQAWQQVLLPMEKPSTS*YISSSS Trigger: AGAAGAGGAAGAAATGTACAATGACGTCGATGGCTT...TTCCATGGGTAAGAGCACCTGCTGCCAGGCCTGATGACCTGAGTTCAGGCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR CAA 90 bp	CTTCGTTGCTGTCTTCTTTGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGTCCAGGTACCCTTGCTaGATGACGCTATCCAGCTCT	+
Preference number: 5 (lower is better) Translates to: LRCCLLCSRLVGKAYGCGSRYPC*MTLSSS Trigger: AGAGCTGGATAGCGTCATCAAGCAAGGGTACCTGGA...CCCACATCCATAAGCCTTTCCTACAAGCCTGCTACAAAGAAGACAGCAACGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CAA 90 bp	TGTCTTCTTTGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACACAGAGCTTCTCCAGGTACCCTaGCTTGATGACGCTATCCAG	+
Preference number: 5 (lower is better) Translates to: CLLCSRLVGKAYGCGDTELLQVP*LDDAIQ Trigger: CTGGATAGCGTCATCAAGCAAGGGTACCTGGAGAAG...CTCTGTGTCCCCACATCCATAAGCCTTTCCTACAAGCCTGCTACAAAGAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CAA 90 bp	AGGAAAGGCTTATGGATGTGGGGACACAGAGAGGGCAGGAAGCTAGAAGCTGGCAAGCCATCGACGTCATaGTACATTTCTTCCTCTTCT	+
Preference number: 5 (lower is better) Translates to: RKGLWMWGHREGRKLEAGKPSTS*YISSSS Trigger: AGAAGAGGAAGAAATGTACAATGACGTCGATGGCTT...GCCAGCTTCTAGCTTCCTGCCCTCTCTGTGTCCCCACATCCATAAGCCTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CAA 90 bp	TTATTTATTCATGTGTGTGGGTATACATGTGGCACGGTACATGCACGGAGGTCAACTGGGAGCCAGACCTaGGGGAGTCAAAGCCATCGA	+
Preference number: 5 (lower is better) Translates to: LFIHVCGYTCGTVHARRSTGSQT*GSQSHR Trigger: TCGATGGCTTTGACTCCCCAAGGTCTGGCTCCCAGT...TGACCTCCGTGCATGTACCGTGCCACATGTATACCCACACACATGAATAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR CAA 90 bp	CTTTTGTCCAAAGCATACTGCTGGGGCTCAGTGAGAACCTGGACTCGGAATGTGGCAGCTGGATTTGATTaGCTGGAAACCCCGAAGAAT	+
Preference number: 5 (lower is better) Translates to: LLSKAYCWGSVRTWTRNVAAGFD*LETPKN Trigger: ATTCTTCGGGGTTTCCAGCAAATCAAATCCAGCTGC...CACATTCCGAGTCCAGGTTCTCACTGAGCCCCAGCAGTATGCTTTGGACAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
CDS-3UTR CAA 90 bp	AGGATTTGTGGCACTGTCTTAGGAGCCCCACGTTATGCAATGGACCAAGAGCAGGTACCTGGATTTGATTaGCTGGAAACCCCGAAGAAT	+
Preference number: 5 (lower is better) Translates to: RICGTVLGAPRYAMDQEQVPGFD*LETPKN Trigger: ATTCTTCGGGGTTTCCAGCAAATCAAATCCAGGTAC...CTGCTCTTGGTCCATTGCATAACGTGGGGCTCCTAAGACAGTGCCACAAATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
CDS-3UTR CAA 90 bp	GCAAGGCATAAGCACTTGGAATCATGCAGTAGATCCCTGAGCAGAGATGGGTGGGTACCTGGATTTGATTaGCTGGAAACCCCGAAGAAT	+
Preference number: 5 (lower is better) Translates to: ARHKHLESCSRSLSRDGWVPGFD*LETPKN Trigger: ATTCTTCGGGGTTTCCAGCAAATCAAATCCAGGTAC...CCACCCATCTCTGCTCAGGGATCTACTGCATGATTCCAAGTGCTTATGCCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107663.4
CDS-3UTR CAA 90 bp	CATGATTTCCTTCGTTGCTGTCTTCTTTGTAGCAGGCTTGTAGGAAAGGCTTATGATGAGGTCACCCCGTaGGAAGGACAGTTCATCCGG	+
Preference number: 5 (lower is better) Translates to: HDFLRCCLLCSRLVGKAYDEVTP*EGQFIR Trigger: CCGGATGAACTGTCCTTCCAACGGGGTGACCTCATC...ATAAGCCTTTCCTACAAGCCTGCTACAAAGAAGACAGCAACGAAGGAAATCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CAA 90 bp	GGCCGTCTTTTGTCCAAAGCATACTGCTGGGGCTCAGTGAGAACCTGGACTCGGGAATGTAATCCCTCCTaGGTACATTTTCAAGTACAA	+
Preference number: 5 (lower is better) Translates to: GRLLSKAYCWGSVRTWTRECNPS*VHFQVQ Trigger: TTGTACTTGAAAATGTACCAAGGAGGGATTACATTC...CCGAGTCCAGGTTCTCACTGAGCCCCAGCAGTATGCTTTGGACAAAAGACGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100519.11
CDS-3UTR CAA 90 bp	TTACCGCTTGTTTTTGTTCATTTGGCTGCAATGCTCCCTTCTTATGGCCTATCAGCCAAGGTCACCTCCTaGGGGCTGAAAATCCCAACA	+
Preference number: 5 (lower is better) Translates to: LPLVFVHLAAMLPSYGLSAKVTS*GLKIPT Trigger: TGTTGGGATTTTCAGCCCCAAGGAGGTGACCTTGGC...TGATAGGCCATAAGAAGGGAGCATTGCAGCCAAATGAACAAAAACAAGCGGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
CDS-3UTR CAA 90 bp	TGTCTTCTTTGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACACAGAGGTACCTGGATTTGATTaGCTGGAAACCCCGAAGAAT	+
Preference number: 5 (lower is better) Translates to: CLLCSRLVGKAYGCGDTEVPGFD*LETPKN Trigger: ATTCTTCGGGGTTTCCAGCAAATCAAATCCAGGTAC...CTCTGTGTCCCCACATCCATAAGCCTTTCCTACAAGCCTGCTACAAAGAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CAA 90 bp	CCATACAAGGCAAGGAAACATATCCAGACTTTATTTCTGCTTTGCAAGCCACAACTTCTCCAGGTACCCTaGCTTGATGACGCTATCCAG	+
Preference number: 5 (lower is better) Translates to: PYKARKHIQTLFLLCKPQLLQVP*LDDAIQ Trigger: CTGGATAGCGTCATCAAGCAAGGGTACCTGGAGAAG...TTGTGGCTTGCAAAGCAGAAATAAAGTCTGGATATGTTTCCTTGCCTTGTATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR CAA 90 bp	TGTCTTCTTTGTAGCAGGCTTGTAGGAAAGGCTTATGGATGTGGGGACACAGAGAAGCCATCGACGTCATaGTACATTTCTTCCTCTTCT	+
Preference number: 5 (lower is better) Translates to: CLLCSRLVGKAYGCGDTEKPSTS*YISSSS Trigger: AGAAGAGGAAGAAATGTACAATGACGTCGATGGCTT...CTCTGTGTCCCCACATCCATAAGCCTTTCCTACAAGCCTGCTACAAAGAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS-3UTR CAA 90 bp	AGAAACAGGTCTGATGAACTGTCTTCTTCCTACTCATCTTATCAGTGGCTTAAATCCAGGTACCCTTGCTaGATGACGCTATCCAGCTCT	+
Preference number: 5 (lower is better) Translates to: RNRSDELSSSYSSYQWLKSRYPC*MTLSSS Trigger: AGAGCTGGATAGCGTCATCAAGCAAGGGTACCTGGA...TTTAAGCCACTGATAAGATGAGTAGGAAGAAGACAGTTCATCAGACCTGTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
CDS-3UTR CAA 90 bp	AGGCAAGGAAACATATCCAGACTTTATTTCTGCTTTGCAAGCCACAACCCATCAGTACCTGGATTTGATTaGCTGGAAACCCCGAAGAAT	+
Preference number: 5 (lower is better) Translates to: RQGNISRLYFCFASHNPSVPGFD*LETPKN Trigger: ATTCTTCGGGGTTTCCAGCAAATCAAATCCAGGTAC...TGATGGGTTGTGGCTTGCAAAGCAGAAATAAAGTCTGGATATGTTTCCTTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS-3UTR CAA 90 bp	CAAGGAAACATATCCAGACTTTATTTCTGCTTTGCAAGCCACAACCCATCAGTAGTACCTGGATTTGATTaGCTGGAAACCCCGAAGAAT	+
Preference number: 5 (lower is better) Translates to: QGNISRLYFCFASHNPSVVPGFD*LETPKN Trigger: ATTCTTCGGGGTTTCCAGCAAATCAAATCCAGGTAC...TACTGATGGGTTGTGGCTTGCAAAGCAGAAATAAAGTCTGGATATGTTTCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS TCA 72 bp	GACCAAAAGGATGCTTCTGACGTGAGGGGTGGGCCGTaGGTCCCACTCAGATTGTCATCAGAGCCGTCCTGG	+
Preference number: 6 (lower is better) Translates to: DQKDASDVRGGP*VPLRLSSEPSW Trigger: CCAGGACGGCTCTGATGACAATCTGAGTGGGACTCACGGCCCACCCCTCACGTCAGAAGCATCCTTTTGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11 ENSMUST00000107662.9 ENSMUST00000107663.4
CDS CCA 72 bp	GTTCCCTTGCTCAGAATGCGGATGAGGTCACCCCGTTaGAAGGACAGTTCATCCGGCTGGTCACCATGGCAA	+
Preference number: 6 (lower is better) Translates to: VPLLRMRMRSPR*KDSSSGWSPWQ Trigger: TTGCCATGGTGACCAGCCGGATGAACTGTCCTTCCAACGGGGTGACCTCATCCGCATTCTGAGCAAGGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS CAA 72 bp	GTACTCCTTGCTCAGAATGCGGATGAGGTCACCCCGTaGGAAGGACAGTTCATCCGGCTGGTCACCATGGCA	+
Preference number: 6 (lower is better) Translates to: VLLAQNADEVTP*EGQFIRLVTMA Trigger: TGCCATGGTGACCAGCCGGATGAACTGTCCTTCCAACGGGGTGACCTCATCCGCATTCTGAGCAAGGAGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
CDS CAA 72 bp	TGTTCCCTTGCTCAGAATGCGGATGAGGTCACCCCGTaGGAAGGACAGTTCATCCGGCTGGTCACCATGGCA	+
Preference number: 6 (lower is better) Translates to: CSLAQNADEVTP*EGQFIRLVTMA Trigger: TGCCATGGTGACCAGCCGGATGAACTGTCCTTCCAACGGGGTGACCTCATCCGCATTCTGAGCAAGGGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS GCA 72 bp	TGCCCCAGGGCTGAGGTTCTCATTCTGCAAGCCTTCTaGCAGGAAGTCTTCGGTATCTTCCAGGAGCCAACA	+
Preference number: 6 (lower is better) Translates to: CPRAEVLILQAF*QEVFGIFQEPT Trigger: TGTTGGCTCCTGGAAGATACCGAAGACTTCCTGGCAGAAGGCTTGCAGAATGAGAACCTCAGCCCTGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000071510.14 ENSMUST00000100519.11 ENSMUST00000100521.10 ENSMUST00000103154.11 ENSMUST00000107662.9 ENSMUST00000107663.4
CDS CCA 72 bp	AGGCAAGGCCATGGCTCTGCACTGGGAGCCAGACCTTaGGGAGTCAAAGCCATCGACGTCATTGTACATTTC	+
Preference number: 6 (lower is better) Translates to: RQGHGSALGARP*GVKAIDVIVHF Trigger: GAAATGTACAATGACGTCGATGGCTTTGACTCCCCAAGGTCTGGCTCCCAGTGCAGAGCCATGGCCTTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS CCA 72 bp	TACTCCTTGCTCAGAATGCGGATGAGGTCACCCCGTTaGAAGGACAGTTCATCCGGCTGGTCACCATGGCAA	+
Preference number: 6 (lower is better) Translates to: YSLLRMRMRSPR*KDSSSGWSPWQ Trigger: TTGCCATGGTGACCAGCCGGATGAACTGTCCTTCCAACGGGGTGACCTCATCCGCATTCTGAGCAAGGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
CDS CAA 72 bp	CAGGCAAGGCCATGGCTCTGCACTGGGAGCCAGACCTaGGGGAGTCAAAGCCATCGACGTCATTGTACATTT	+
Preference number: 6 (lower is better) Translates to: QARPWLCTGSQT*GSQSHRRHCTF Trigger: AAATGTACAATGACGTCGATGGCTTTGACTCCCCAAGGTCTGGCTCCCAGTGCAGAGCCATGGCCTTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS TCA 72 bp	TTGATTTGCTGGAAACCCCGAAGAATGTGGGCTCTCTaGTCCTGTGCCCCAGGGCTGAGGTTCTCATTCTGC	+
Preference number: 6 (lower is better) Translates to: LICWKPRRMWAL*SCAPGLRFSFC Trigger: GCAGAATGAGAACCTCAGCCCTGGGGCACAGGATCAGAGAGCCCACATTCTTCGGGGTTTCCAGCAAATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000071510.14 ENSMUST00000100519.11 ENSMUST00000100521.10 ENSMUST00000103154.11 ENSMUST00000107662.9 ENSMUST00000107663.4
CDS TCA 72 bp	TCAGAGCCGTCCTGGCCAAGGTCACCTCCTTGGGGCTaGAAATCCCAACAGTACCTGGATTTGATTTGCTGG	+
Preference number: 6 (lower is better) Translates to: SEPSWPRSPPWG*KSQQYLDLICW Trigger: CCAGCAAATCAAATCCAGGTACTGTTGGGATTTTCAGCCCCAAGGAGGTGACCTTGGCCAGGACGGCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11 ENSMUST00000107662.9 ENSMUST00000107663.4
CDS TCA 72 bp	AGCCGTACATGTTGTACTCCTTGCTCAGAATGCGGATaGGGTCACCCCGTTGGAAGGACAGTTCATCCGGCT	+
Preference number: 6 (lower is better) Translates to: SRTCCTPCSECG*GHPVGRTVHPA Trigger: AGCCGGATGAACTGTCCTTCCAACGGGGTGACCTCATCCGCATTCTGAGCAAGGAGTACAACATGTACGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
CDS TCA 72 bp	CGTCCTGATAATCTGACCAAAAGGATGCTTCTGACGTaGGGGGTGGGCCGTGAGTCCCACTCAGATTGTCAT	+
Preference number: 6 (lower is better) Translates to: RPDNLTKRMLLT*GVGRESHSDCH Trigger: ATGACAATCTGAGTGGGACTCACGGCCCACCCCTCACGTCAGAAGCATCCTTTTGGTCAGATTATCAGGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11 ENSMUST00000107662.9 ENSMUST00000107663.4
CDS TCA 72 bp	TGGTCTGAGAATATGTTCCCTTGCTCAGAATGCGGATaGGGTCACCCCGTTGGAAGGACAGTTCATCCGGCT	+
Preference number: 6 (lower is better) Translates to: WSENMFPCSECG*GHPVGRTVHPA Trigger: AGCCGGATGAACTGTCCTTCCAACGGGGTGACCTCATCCGCATTCTGAGCAAGGGAACATATTCTCAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS TCA 72 bp	CATGGCCAGAGTAGGGGACGGGAGTTTCTGATGGTCTaGGAATATGTTCCCTTGCTCAGAATGCGGATGAGG	+
Preference number: 6 (lower is better) Translates to: HGQSRGREFLMV*EYVPLLRMRMR Trigger: CCTCATCCGCATTCTGAGCAAGGGAACATATTCTCAGACCATCAGAAACTCCCGTCCCCTACTCTGGCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100521.10
CDS CAA 90 bp	CCCACTCAGATTGTCATCAGAGCCGTCCTGGCCAAGGTCACCTCCTaGGGGCTGAAAATCCCAACAGTACCTGGATTTGATTTGCTGGAA	+
Preference number: 6 (lower is better) Translates to: PTQIVIRAVLAKVTS*GLKIPTVPGFDLLE Trigger: TTCCAGCAAATCAAATCCAGGTACTGTTGGGATTTTCAGCCCCAAGGAGGTGACCTTGGCCAGGACGGCTCTGATGACAATCTGAGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11 ENSMUST00000107662.9 ENSMUST00000107663.4
CDS CAA 90 bp	CTGCACTGGGAGCCAGACCTTGGGGAGTCAAAGCCATCGACGTCATaGTACATTTCTTCCTCTTCTTTCTCTTCTTCCTCCTCTTCCTCC	+
Preference number: 6 (lower is better) Translates to: LHWEPDLGESKPSTS*YISSSSFSSSSSSS Trigger: GGAGGAAGAGGAGGAAGAAGAGAAAGAAGAGGAAGAAATGTACAATGACGTCGATGGCTTTGACTCCCCAAGGTCTGGCTCCCAGTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS TCA 72 bp	TCCAGGTACCCTTGCTTGATGACGCTATCCAGCTCTTaGGCCCCTCTTAAGATGTCTTCTATTCCCTCGTCC	+
Preference number: 6 (lower is better) Translates to: SRYPCLMTLSSS*APLKMSSIPSS Trigger: GGACGAGGGAATAGAAGACATCTTAAGAGGGGCTCAAGAGCTGGATAGCGTCATCAAGCAAGGGTACCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11
CDS CAA 72 bp	ATTGTCATCAGAGCCGTCCTGGCCAAGGTCACCTCCTaGGGGCTGAAAATCCCAACAGTACCTGGATTTGAT	+
Preference number: 6 (lower is better) Translates to: IVIRAVLAKVTS*GLKIPTVPGFD Trigger: ATCAAATCCAGGTACTGTTGGGATTTTCAGCCCCAAGGAGGTGACCTTGGCCAGGACGGCTCTGATGACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000071510.14 ENSMUST00000100521.10 ENSMUST00000103154.11 ENSMUST00000107662.9 ENSMUST00000107663.4
CDS CCA 72 bp	TCCTTCCATTTCAAAGGCGGTGGTGAGATAGTCCTTTaGAACAATTCCAATGACGCTGTTCAGCTCTCCTAC	+
Preference number: 6 (lower is better) Translates to: SFHFKGGGEIVL*NNSNDAVQLSY Trigger: GTAGGAGAGCTGAACAGCGTCATTGGAATTGTTCCAAAGGACTATCTCACCACCGCCTTTGAAATGGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071510.14 ENSMUST00000103154.11
CDS GCA 72 bp	GATTTCATAAAGACAGGAAGTGGAGCATTTTCTAGATaGCTGCGAGCTGTCAAGAAGCCGAATGATGGTGTC	+
Preference number: 6 (lower is better) Translates to: DFIKTGSGAFSR*LRAVKKPNDGV Trigger: GACACCATCATTCGGCTTCTTGACAGCTCGCAGGCATCTAGAAAATGCTCCACTTCCTGTCTTTATGAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107662.9
CDS CCA 72 bp	TTTCTTTTGTCCTATGTGAAGAATGTAATCCCTCCTTaGTACATTTTCAAGTACAATAATGCAGCTGGATTT	+
Preference number: 6 (lower is better) Translates to: FLLSYVKNVIPP*YIFKYNNAAGF Trigger: AAATCCAGCTGCATTATTGTACTTGAAAATGTACCAAGGAGGGATTACATTCTTCACATAGGACAAAAGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100519.11

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