Pregenerated sensors for SKA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021965Ensembl transcript IDs: ENSMUST00000022536.3
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCTCAGAGTAGGTGTTCAGAATCTTCCAGGTAGAATCGGGATCTaGTGGGTGGTCAAGCTGGAAAGGCCACCACAGTGCGGTGAAACG | + |
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Preference number: 1 (lower is better) Translates to: WLRVGVQNLPGRIGI*WVVKLERPPQCGET Trigger: CGTTTCACCGCACTGTGGTGGCCTTTCCAGCTTGACCACCCAGCAGATCCCGATTCTACCTGGAAGATTCTGAACACCTACTCTGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR GCA 90 bp | GAGGGCAACGGATCCCATTACAGATGGTTGTTACCACCATGTGGTTaGTGGGAATTGAACTCAGGACCTCTGGAAGAACAGTCAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: EGNGSHYRWLLPPCG*WELNSGPLEEQSVL Trigger: GAGCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGTAACAACCATCTGTAATGGGATCCGTTGCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR CCA 90 bp | AGAAAGAAGACTGACTGCCAGCAGGAGCCCTCTCTCCACTTCTACTaGTCTGTGCTAACCAGTTATAATCCTGAGAACCTTAGTCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: RKKTDCQQEPSLHFY*SVLTSYNPENLSPA Trigger: AGCTGGACTAAGGTTCTCAGGATTATAACTGGTTAGCACAGACCAGTAGAAGTGGAGAGAGGGCTCCTGCTGGCAGTCAGTCTTCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR CCA 90 bp | GGCAACGGATCCCATTACAGATGGTTGTTACCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: GNGSHYRWLLPPCGC*ELNSGPLEEQSVLL Trigger: TAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGTAACAACCATCTGTAATGGGATCCGTTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR TCA 90 bp | ATTGAACTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTAACCACTaGGCCATCTCTCTAGCTCTCCACTTGATTTTCAATGCACAATTA | + |
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Preference number: 1 (lower is better) Translates to: IELRTSGRTVSALNH*AISLALHLIFNAQL Trigger: TAATTGTGCATTGAAAATCAAGTGGAGAGCTAGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR CCA 90 bp | AACTTGGAGAATTACTTTCTAACTGTTCTTGGATCAGAAGGATCTTaGGCTCAAAGGCCATTAGATAGTTCCAGAATCAAGACGTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: NLENYFLTVLGSEGS*AQRPLDSSRIKTFP Trigger: TGGGAACGTCTTGATTCTGGAACTATCTAATGGCCTTTGAGCCCAAGATCCTTCTGATCCAAGAACAGTTAGAAAGTAATTCTCCAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR GCA 90 bp | TATTGGGAGAAAGAAATTCCCAAAACTAGTCAGTCAACTGGTATTTaGCAATTATTTCTCAAAATTGTAGCTGGACTCTTCAGAACACCA | + |
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Preference number: 1 (lower is better) Translates to: YWEKEIPKTSQSTGI*QLFLKIVAGLFRTP Trigger: TGGTGTTCTGAAGAGTCCAGCTACAATTTTGAGAAATAATTGGCAAATACCAGTTGACTGACTAGTTTTGGGAATTTCTTTCTCCCAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR-3UTR CCA 90 bp | TGGACTCTTCAGAACACCAGCTCCTCATTCCCTACCTGGCTGCAGCACAAAGCTGCTGGGTGGTCAAGCTaGAAAGGCCACCACAGTGCG | + |
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Preference number: 2 (lower is better) Translates to: WTLQNTSSSFPTWLQHKAAGWSS*KGHHSA Trigger: CGCACTGTGGTGGCCTTTCCAGCTTGACCACCCAGC...AGCTTTGTGCTGCAGCCAGGTAGGGAATGAGGAGCTGGTGTTCTGAAGAGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCAGAACACCAGCTCCTCATTCCCTACCTGGCTGCAGCACAAAGCTCTCCCGTTCCCAAGGCTTCTaGCTCAGAGTAGGTGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: LFRTPAPHSLPGCSTKLSRSQGF*LRVGVQ Trigger: CTGAACACCTACTCTGAGCCAGAAGCCTTGGGAACG...GGAGAGCTTTGTGCTGCAGCCAGGTAGGGAATGAGGAGCTGGTGTTCTGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR-3UTR CCA 90 bp | GACTCTTCAGAACACCAGCTCCTCATTCCCTACCTGGCTGCAGCACAAAGCTCTAGAATCGGGATCTGCTaGGTGGTCAAGCTGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: DSSEHQLLIPYLAAAQSSRIGIC*VVKLER Trigger: CCTTTCCAGCTTGACCACCCAGCAGATCCCGATTCT...AGAGCTTTGTGCTGCAGCCAGGTAGGGAATGAGGAGCTGGTGTTCTGAAGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR CAA 90 bp | AGAGGGCAACGGATCCCATTACAGATGGTTGTTACCACCATGTGGTaGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGTCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: RGQRIPLQMVVTTMW*LGIELRTSGRTVSA Trigger: AGCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGTAACAACCATCTGTAATGGGATCCGTTGCCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR CAA 90 bp | GGATCCCATTACAGATGGTTGTTACCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTAACCACT | + |
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Preference number: 2 (lower is better) Translates to: GSHYRWLLPPCGCWE*NSGPLEEQSVLLTT Trigger: AGTGGTTAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGTAACAACCATCTGTAATGGGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR-3UTR CCA 90 bp | ATTGGGAGAAAGAAATTCCCAAAACTAGTCAGTCAACTGGTATTTGCCAATTATTCCTCATTCCCTACCTaGCTGCAGCACAAAGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: IGRKKFPKLVSQLVFANYSSFPT*LQHKAL Trigger: GAGAGCTTTGTGCTGCAGCCAGGTAGGGAATGAGGA...ATAATTGGCAAATACCAGTTGACTGACTAGTTTTGGGAATTTCTTTCTCCCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR-3UTR CCA 90 bp | ATTGGGAGAAAGAAATTCCCAAAACTAGTCAGTCAACTGGTATTTGCCAATTATTCTCTCCACTTCTACTaGTCTGTGCTAACCAGTTAT | + |
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Preference number: 2 (lower is better) Translates to: IGRKKFPKLVSQLVFANYSLHFY*SVLTSY Trigger: ATAACTGGTTAGCACAGACCAGTAGAAGTGGAGAGA...ATAATTGGCAAATACCAGTTGACTGACTAGTTTTGGGAATTTCTTTCTCCCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR CCA 72 bp | GGTGTTCAGAATCTTCCAGGTAGAATCGGGATCTGCTaGGTGGTCAAGCTGGAAAGGCCACCACAGTGCGGT | + |
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Preference number: 3 (lower is better) Translates to: GVQNLPGRIGIC*VVKLERPPQCG Trigger: ACCGCACTGTGGTGGCCTTTCCAGCTTGACCACCCAGCAGATCCCGATTCTACCTGGAAGATTCTGAACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR GCA 72 bp | GTAGGTGTTCAGAATCTTCCAGGTAGAATCGGGATCTaGTGGGTGGTCAAGCTGGAAAGGCCACCACAGTGC | + |
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Preference number: 3 (lower is better) Translates to: VGVQNLPGRIGI*WVVKLERPPQC Trigger: GCACTGTGGTGGCCTTTCCAGCTTGACCACCCAGCAGATCCCGATTCTACCTGGAAGATTCTGAACACCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR CCA 72 bp | TGGACTCTTCAGAACACCAGCTCCTCATTCCCTACCTaGCTGCAGCACAAAGCTCTCCCAAGTAGCACTGTC | + |
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Preference number: 3 (lower is better) Translates to: WTLQNTSSSFPT*LQHKALPSSTV Trigger: GACAGTGCTACTTGGGAGAGCTTTGTGCTGCAGCCAGGTAGGGAATGAGGAGCTGGTGTTCTGAAGAGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR CCA 72 bp | ACTGACTGCCAGCAGGAGCCCTCTCTCCACTTCTACTaGTCTGTGCTAACCAGTTATAATCCTGAGAACCTT | + |
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Preference number: 3 (lower is better) Translates to: TDCQQEPSLHFY*SVLTSYNPENL Trigger: AAGGTTCTCAGGATTATAACTGGTTAGCACAGACCAGTAGAAGTGGAGAGAGGGCTCCTGCTGGCAGTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR TCA 72 bp | AGGACCTCTGGAAGAACAGTCAGTGCTCTTAACCACTaGGCCATCTCTCTAGCTCTCCACTTGATTTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: RTSGRTVSALNH*AISLALHLIFN Trigger: ATTGAAAATCAAGTGGAGAGCTAGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGTTCTTCCAGAGGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR-3UTR CAA 90 bp | GAATCAAGACGTTCCCAAGGCTTCTGGCTCAGAGTAGGTGTTCAGAATCTTCCATGTCTAGCTTCTGTATaGGATGTATCCACTGTAGAA | + |
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Preference number: 3 (lower is better) Translates to: ESRRSQGFWLRVGVQNLPCLASV*DVSTVE Trigger: TTCTACAGTGGATACATCCAATACAGAAGCTAGACA...TGGAAGATTCTGAACACCTACTCTGAGCCAGAAGCCTTGGGAACGTCTTGATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR CCA 72 bp | AACTGGTATTTGCCAATTATTTCTCAAAATTGTAGCTaGACTCTTCAGAACACCAGCTCCTCATTCCCTACC | + |
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Preference number: 3 (lower is better) Translates to: NWYLPIISQNCS*TLQNTSSSFPT Trigger: GGTAGGGAATGAGGAGCTGGTGTTCTGAAGAGTCCAGCTACAATTTTGAGAAATAATTGGCAAATACCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR CCA 72 bp | TTATGCCACACAAAATTTCCTAAAGCTGCCAGACGGTaGTGGTACACATCTTTAATTTCTACTCAAGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: LCHTKFPKAARR*WYTSLISTQEA Trigger: TGCCTCTTGAGTAGAAATTAAAGATGTGTACCACCACCGTCTGGCAGCTTTAGGAAATTTTGTGTGGCATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CCA 90 bp | CAGGTAGAATCGGGATCTGCTGGGTGGTCAAGCTGGAAAGGCCACCACAGTGCGCCCCGCAGCTTACAGTaGAAACTCTGGATGGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: QVESGSAGWSSWKGHHSAPRSLQ*KLWMGF Trigger: GAACCCCATCCAGAGTTTCCACTGTAAGCTGCGGGG...CGCACTGTGGTGGCCTTTCCAGCTTGACCACCCAGCAGATCCCGATTCTACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR GCA 90 bp | CAGGTAGAATCGGGATCTGCTGGGTGGTCAAGCTGGAAAGGCCACCACAGTGCGGAGTTGTTCACTCTGTaGTCACAGCCTGAATCCTCC | + |
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Preference number: 4 (lower is better) Translates to: QVESGSAGWSSWKGHHSAELFTL*SQPESS Trigger: GGAGGATTCAGGCTGTGAGCACAGAGTGAACAACTC...CGCACTGTGGTGGCCTTTCCAGCTTGACCACCCAGCAGATCCCGATTCTACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CCA 90 bp | CTCTTCAGAACACCAGCTCCTCATTCCCTACCTGGCTGCAGCACAAAGCTCTCCCTGTCTGGGGAGGGTTaGCTGGGACTTGGGAAATTA | + |
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Preference number: 4 (lower is better) Translates to: LFRTPAPHSLPGCSTKLSLSGEG*LGLGKL Trigger: TAATTTCCCAAGTCCCAGCCAACCCTCCCCAGACAG...GGAGAGCTTTGTGCTGCAGCCAGGTAGGGAATGAGGAGCTGGTGTTCTGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CCA 90 bp | AGAGAGACTGGGAGAAAGAAGACTGACTGCCAGCAGGAGCCCTCTCTCCACTTCGGTGCCCTTCCTCCGTaGCATCACTTTAACATCCAA | + |
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Preference number: 4 (lower is better) Translates to: RETGRKKTDCQQEPSLHFGALPP*HHFNIQ Trigger: TTGGATGTTAAAGTGATGCCACGGAGGAAGGGCACC...GAAGTGGAGAGAGGGCTCCTGCTGGCAGTCAGTCTTCTTTCTCCCAGTCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CCA 90 bp | AAGAAGACTGACTGCCAGCAGGAGCCCTCTCTCCACTTCTACTGGTCTGTGCTACAGCTAACTCTGGGGTaGAGTTGTTCACTCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: KKTDCQQEPSLHFYWSVLQLTLG*SCSLCA Trigger: AGCACAGAGTGAACAACTCCACCCCAGAGTTAGCTG...TAGCACAGACCAGTAGAAGTGGAGAGAGGGCTCCTGCTGGCAGTCAGTCTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR TCA 90 bp | TGGACTCTTCAGAACACCAGCTCCTCATTCCCTACCTGGCTGCAGCACAAAGCTTTCACACCGGCCTTTTaGATGTCTTTACACACAGCT | + |
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Preference number: 4 (lower is better) Translates to: WTLQNTSSSFPTWLQHKAFTPAF*MSLHTA Trigger: AGCTGTGTGTAAAGACATTCAAAAGGCCGGTGTGAA...AGCTTTGTGCTGCAGCCAGGTAGGGAATGAGGAGCTGGTGTTCTGAAGAGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR TCA 90 bp | TGGTGGTACACATCTTTAATTTCTACTCAAGAGGCAGAGACAGGAGGATCTAGCCTGAAGTCCAAAGTCTaGGAGCTGTGGGCTTCGCAG | + |
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Preference number: 4 (lower is better) Translates to: WWYTSLISTQEAETGGSSLKSKV*ELWASQ Trigger: CTGCGAAGCCCACAGCTCTCAGACTTTGGACTTCAG...GCTAGATCCTCCTGTCTCTGCCTCTTGAGTAGAAATTAAAGATGTGTACCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR CAA 72 bp | TACAGATGGTTGTTACCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAACAGTCAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: YRWLLPPCGCWE*NSGPLEEQSVL Trigger: GAGCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGTAACAACCATCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| 3UTR CAA 72 bp | CGGATCCCATTACAGATGGTTGTTACCACCATGTGGTaGCTGGGAATTGAACTCAGGACCTCTGGAAGAACA | + |
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Preference number: 4 (lower is better) Translates to: RIPLQMVVTTMW*LGIELRTSGRT Trigger: TGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGTAACAACCATCTGTAATGGGATCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CCA 90 bp | ACCCTGTATTGGGAGAAAGAAATTCCCAAAACTAGTCAGTCAACTGGTATTTGCGAACAGAGGGGTCTTTaGCAGGAGGGGTCTCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: TLYWEKEIPKTSQSTGICEQRGL*QEGSQL Trigger: TAGCTGAGACCCCTCCTGCCAAAGACCCCTCTGTTC...GCAAATACCAGTTGACTGACTAGTTTTGGGAATTTCTTTCTCCCAATACAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CCA 90 bp | CAAAATTGTAGCTGGACTCTTCAGAACACCAGCTCCTCATTCCCTACCTGGCTGTTTTCTTCCATCTGCTaGATTATGGGACCAGGAATG | + |
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Preference number: 4 (lower is better) Translates to: QNCSWTLQNTSSSFPTWLFSSIC*IMGPGM Trigger: CATTCCTGGTCCCATAATCCAGCAGATGGAAGAAAA...CAGCCAGGTAGGGAATGAGGAGCTGGTGTTCTGAAGAGTCCAGCTACAATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR TCA 90 bp | CCTGAGAACCTTAGTCCAGCTCACTTTCCTGTTCTGTCTAGCTTCTGTATTGGAACAAGAAGTAATTGCTaGAGAAGGGGGCTCTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: PENLSPAHFPVLSSFCIGTRSNC*RRGLCK Trigger: TTTGCAGAGCCCCCTTCTTCAGCAATTACTTCTTGT...TCCAATACAGAAGCTAGACAGAACAGGAAAGTGAGCTGGACTAAGGTTCTCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR GCA 90 bp | GACTCTTCAGAACACCAGCTCCTCATTCCCTACCTGGCTGCAGCACAAAGCTCTCATCAGTATTTTTGTTaGCTTTTTGAACCTTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: DSSEHQLLIPYLAAAQSSHQYFC*LFEPCA Trigger: AGCACAAGGTTCAAAAAGGCAACAAAAATACTGATG...AGAGCTTTGTGCTGCAGCCAGGTAGGGAATGAGGAGCTGGTGTTCTGAAGAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CCA 90 bp | CCTGAGAACCTTAGTCCAGCTCACTTTCCTGTTCTGTCTAGCTTCTGTATTGGACTGGAGAATGTCTTCTaGAATCGCAGTAACTTTCGG | + |
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Preference number: 4 (lower is better) Translates to: PENLSPAHFPVLSSFCIGLENVF*NRSNFR Trigger: CCGAAAGTTACTGCGATTCCAGAAGACATTCTCCAG...TCCAATACAGAAGCTAGACAGAACAGGAAAGTGAGCTGGACTAAGGTTCTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CCA 90 bp | CCTGAGAACCTTAGTCCAGCTCACTTTCCTGTTCTGTCTAGCTTCTGTATTGGAAACCTTGTGCTTTCTTaGTTCTCCAATCTTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: PENLSPAHFPVLSSFCIGNLVLS*FSNLAS Trigger: TGAAGCAAGATTGGAGAACCAAGAAAGCACAAGGTT...TCCAATACAGAAGCTAGACAGAACAGGAAAGTGAGCTGGACTAAGGTTCTCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CCA 90 bp | CCTGAGAACCTTAGTCCAGCTCACTTTCCTGTTCTGTCTAGCTTCTGTATTGGAAACTTTCGGAGGAGATaGTGTTGCAAAATTTTCACA | + |
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Preference number: 4 (lower is better) Translates to: PENLSPAHFPVLSSFCIGNFRRR*CCKIFT Trigger: TGTGAAAATTTTGCAACACCATCTCCTCCGAAAGTT...TCCAATACAGAAGCTAGACAGAACAGGAAAGTGAGCTGGACTAAGGTTCTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CCA 90 bp | CCAATTATTTCTCAAAATTGTAGCTGGACTCTTCAGAACACCAGCTCCTCATTCTTATGGGACCAGGAATaGCAAAAGAATTATCACTGG | + |
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Preference number: 4 (lower is better) Translates to: PIISQNCSWTLQNTSSSFLWDQE*QKNYHW Trigger: CCAGTGATAATTCTTTTGCCATTCCTGGTCCCATAA...GAATGAGGAGCTGGTGTTCTGAAGAGTCCAGCTACAATTTTGAGAAATAATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CCA 90 bp | ACCCTGTATTGGGAGAAAGAAATTCCCAAAACTAGTCAGTCAACTGGTATTTGCTGCTTTGTTATCATCTaGAGAATGTCTTCTGGAATC | + |
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Preference number: 4 (lower is better) Translates to: TLYWEKEIPKTSQSTGICCFVII*RMSSGI Trigger: GATTCCAGAAGACATTCTCCAGATGATAACAAAGCA...GCAAATACCAGTTGACTGACTAGTTTTGGGAATTTCTTTCTCCCAATACAGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR GCA 90 bp | GAGAAAGAAATTCCCAAAACTAGTCAGTCAACTGGTATTTGCCAATTATTTCTCGCTAGGTTTGAGCTGTaGTTTGTTATCATCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: EKEIPKTSQSTGICQLFLARFEL*FVIIWR Trigger: TCTCCAGATGATAACAAAGCACAGCTCAAACCTAGC...GAGAAATAATTGGCAAATACCAGTTGACTGACTAGTTTTGGGAATTTCTTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CCA 90 bp | GAGAAAGAAATTCCCAAAACTAGTCAGTCAACTGGTATTTGCCAATTATTTCTCATGCAAAATTCTCCCTaGAGAATCTTCAAAGTCGCT | + |
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Preference number: 4 (lower is better) Translates to: EKEIPKTSQSTGICQLFLMQNSP*RIFKVA Trigger: AGCGACTTTGAAGATTCTCCAGGGAGAATTTTGCAT...GAGAAATAATTGGCAAATACCAGTTGACTGACTAGTTTTGGGAATTTCTTTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR TCA 90 bp | TCAACTGGTATTTGCCAATTATTTCTCAAAATTGTAGCTGGACTCTTCAGAACATTTTTGTTGCCTTTTTaGACCTTGTGCTTTCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: STGICQLFLKIVAGLFRTFLLPF*TLCFLG Trigger: ACCAAGAAAGCACAAGGTTCAAAAAGGCAACAAAAA...TGTTCTGAAGAGTCCAGCTACAATTTTGAGAAATAATTGGCAAATACCAGTTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS CCA 90 bp | CGCCGTCCAGCGCTCTCAGCAGCCGGGCCGTCTCGCTGTCCAGCGTaGTGGCCAGACCCCGCAGCTTACAGTGGAAACTCTGGATGGGGT | + |
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Preference number: 5 (lower is better) Translates to: RRPALSAAGPSRCPA*WPDPAAYSGNSGWG Trigger: ACCCCATCCAGAGTTTCCACTGTAAGCTGCGGGGTCTGGCCACCACGCTGGACAGCGAGACGGCCCGGCTGCTGAGAGCGCTGGACGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS CCA 90 bp | CGTCCAGCGCTCTCAGCAGCCGGGCCGTCTCGCTGTCCAGCGTGGTaGCCAGACCCCGCAGCTTACAGTGGAAACTCTGGATGGGGTTCA | + |
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Preference number: 5 (lower is better) Translates to: RPALSAAGPSRCPAW*PDPAAYSGNSGWGS Trigger: TGAACCCCATCCAGAGTTTCCACTGTAAGCTGCGGGGTCTGGCCACCACGCTGGACAGCGAGACGGCCCGGCTGCTGAGAGCGCTGGACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS TCA 90 bp | GCTGTCTGGGGAGGGTTGGCTGGGACTTGGGAAATTATGTACCGCTaGAGTCCAAAGTCTGAGAGCTGTGGGCTTCGCAGAGGCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: AVWGGLAGTWEIMYR*SPKSESCGLRRGSS Trigger: TGAAGAGCCTCTGCGAAGCCCACAGCTCTCAGACTTTGGACTTCAGCGGTACATAATTTCCCAAGTCCCAGCCAACCCTCCCCAGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CAA 90 bp | TGGACTCTTCAGAACACCAGCTCCTCATTCCCTACCTGGCTGCAGCACAAAGCTGCTGTCTGGGGAGGGTaGGCTGGGACTTGGGAAATT | + |
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Preference number: 5 (lower is better) Translates to: WTLQNTSSSFPTWLQHKAAVWGG*AGTWEI Trigger: AATTTCCCAAGTCCCAGCCAACCCTCCCCAGACAGC...AGCTTTGTGCTGCAGCCAGGTAGGGAATGAGGAGCTGGTGTTCTGAAGAGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS TCA 90 bp | GTTGGCTGGGACTTGGGAAATTATGTACCGCTGAAGTCCAAAGTCTaGGAGCTGTGGGCTTCGCAGAGGCTCTTCAGAAACAGAACCGCT | + |
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Preference number: 5 (lower is better) Translates to: VGWDLGNYVPLKSKV*ELWASQRLFRNRTA Trigger: AGCGGTTCTGTTTCTGAAGAGCCTCTGCGAAGCCCACAGCTCTCAGACTTTGGACTTCAGCGGTACATAATTTCCCAAGTCCCAGCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CAA 90 bp | AGAGAGACTGGGAGAAAGAAGACTGACTGCCAGCAGGAGCCCTCTCTCCACTTCCTTCACACCGGCCTTTaGAATGTCTTTACACACAGC | + |
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Preference number: 5 (lower is better) Translates to: RETGRKKTDCQQEPSLHFLHTGL*NVFTHS Trigger: GCTGTGTGTAAAGACATTCAAAAGGCCGGTGTGAAG...GAAGTGGAGAGAGGGCTCCTGCTGGCAGTCAGTCTTCTTTCTCCCAGTCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS CCA 90 bp | TCACACCGGCCTTTTGAATGTCTTTACACACAGCTAACTCTGGGGTaGAGTTGTTCACTCTGTGCTCACAGCCTGAATCCTCCTTGTCAC | + |
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Preference number: 5 (lower is better) Translates to: SHRPFECLYTQLTLG*SCSLCAHSLNPPCH Trigger: GTGACAAGGAGGATTCAGGCTGTGAGCACAGAGTGAACAACTCCACCCCAGAGTTAGCTGTGTGTAAAGACATTCAAAAGGCCGGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CAA 90 bp | ATAAGAGAGACTGGGAGAAAGAAGACTGACTGCCAGCAGGAGCCCTCTCTCCACGGTTTGAGCTGTGCTTaGTTATCATCTGGAGAATGT | + |
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Preference number: 5 (lower is better) Translates to: IRETGRKKTDCQQEPSLHGLSCA*LSSGEC Trigger: ACATTCTCCAGATGATAACAAAGCACAGCTCAAACC...GTGGAGAGAGGGCTCCTGCTGGCAGTCAGTCTTCTTTCTCCCAGTCTCTCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CAA 90 bp | CCAATTATTTCTCAAAATTGTAGCTGGACTCTTCAGAACACCAGCTCCTCATTCGCTACACGTTCTTCTTaGAGGCTGGCAGCTGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: PIISQNCSWTLQNTSSSFATRSS*RLAAVW Trigger: CCAGACAGCTGCCAGCCTCAAAGAAGAACGTGTAGC...GAATGAGGAGCTGGTGTTCTGAAGAGTCCAGCTACAATTTTGAGAAATAATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CAA 90 bp | GAATCAAGACGTTCCCAAGGCTTCTGGCTCAGAGTAGGTGTTCAGAATCTTCCAAGGGAGAAGCTAGGTTaGAGCTGTGCTTTGTTATCA | + |
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Preference number: 5 (lower is better) Translates to: ESRRSQGFWLRVGVQNLPREKLG*SCALLS Trigger: TGATAACAAAGCACAGCTCAAACCTAGCTTCTCCCT...TGGAAGATTCTGAACACCTACTCTGAGCCAGAAGCCTTGGGAACGTCTTGATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS CCA 90 bp | ATTCCACATCGTTTTCTTCCATCTGCTGGATTATGGGACCAGGAATaGCAAAAGAATTATCACTGGTCACAGGCCCAGTTCCTATGGCTT | + |
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Preference number: 5 (lower is better) Translates to: IPHRFLPSAGLWDQE*QKNYHWSQAQFLWL Trigger: AAGCCATAGGAACTGGGCCTGTGACCAGTGATAATTCTTTTGCCATTCCTGGTCCCATAATCCAGCAGATGGAAGAAAACGATGTGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS CCA 90 bp | GTGAACTTACGTATTCCACATCGTTTTCTTCCATCTGCTGGATTATaGGACCAGGAATGGCAAAAGAATTATCACTGGTCACAGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: VNLRIPHRFLPSAGL*DQEWQKNYHWSQAQ Trigger: CTGGGCCTGTGACCAGTGATAATTCTTTTGCCATTCCTGGTCCCATAATCCAGCAGATGGAAGAAAACGATGTGGAATACGTAAGTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS GCA 90 bp | GGTGGCAATGGTGAACTTACGTATTCCACATCGTTTTCTTCCATCTaGTGGATTATGGGACCAGGAATGGCAAAAGAATTATCACTGGTC | + |
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Preference number: 5 (lower is better) Translates to: GGNGELTYSTSFSSI*WIMGPGMAKELSLV Trigger: GACCAGTGATAATTCTTTTGCCATTCCTGGTCCCATAATCCAGCAGATGGAAGAAAACGATGTGGAATACGTAAGTTCACCATTGCCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS-3UTR CAA 90 bp | TGGTGGTACACATCTTTAATTTCTACTCAAGAGGCAGAGACAGGAGGATCTAGCGAACCTTGTGCTTTCTaGGTTCTCCAATCTTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: WWYTSLISTQEAETGGSSEPCAF*VLQSCF Trigger: GAAGCAAGATTGGAGAACCAAGAAAGCACAAGGTTC...GCTAGATCCTCCTGTCTCTGCCTCTTGAGTAGAAATTAAAGATGTGTACCACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS CCA 90 bp | GGCAATGGTGAACTTACGTATTCCACATCGTTTTCTTCCATCTGCTaGATTATGGGACCAGGAATGGCAAAAGAATTATCACTGGTCACA | + |
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Preference number: 5 (lower is better) Translates to: GNGELTYSTSFSSIC*IMGPGMAKELSLVT Trigger: TGTGACCAGTGATAATTCTTTTGCCATTCCTGGTCCCATAATCCAGCAGATGGAAGAAAACGATGTGGAATACGTAAGTTCACCATTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS TCA 90 bp | AGAAGGAATTTTCAAACCAGGAGTGCAGAATTTAGGTGGCAATGGTaGACTTACGTATTCCACATCGTTTTCTTCCATCTGCTGGATTAT | + |
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Preference number: 5 (lower is better) Translates to: RRNFQTRSAEFRWQW*TYVFHIVFFHLLDY Trigger: ATAATCCAGCAGATGGAAGAAAACGATGTGGAATACGTAAGTTCACCATTGCCACCTAAATTCTGCACTCCTGGTTTGAAAATTCCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS CCA 72 bp | GCGCTCTCAGCAGCCGGGCCGTCTCGCTGTCCAGCGTaGTGGCCAGACCCCGCAGCTTACAGTGGAAACTCT | + |
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Preference number: 6 (lower is better) Translates to: ALSAAGPSRCPA*WPDPAAYSGNS Trigger: AGAGTTTCCACTGTAAGCTGCGGGGTCTGGCCACCACGCTGGACAGCGAGACGGCCCGGCTGCTGAGAGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS CCA 72 bp | CTCTCAGCAGCCGGGCCGTCTCGCTGTCCAGCGTGGTaGCCAGACCCCGCAGCTTACAGTGGAAACTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LSAAGPSRCPAW*PDPAAYSGNSG Trigger: TCCAGAGTTTCCACTGTAAGCTGCGGGGTCTGGCCACCACGCTGGACAGCGAGACGGCCCGGCTGCTGAGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS TCA 72 bp | CTTTGGCAGGAGGGGTCTCAGCTACACGTTCTTCTTTaGGGCTGGCAGCTGTCTGGGGAGGGTTGGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LWQEGSQLHVLL*GWQLSGEGWLG Trigger: TCCCAGCCAACCCTCCCCAGACAGCTGCCAGCCTCAAAGAAGAACGTGTAGCTGAGACCCCTCCTGCCAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS GCA 72 bp | CACACAGCTAACTCTGGGGTGGAGTTGTTCACTCTGTaGTCACAGCCTGAATCCTCCTTGTCACGCGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: HTANSGVELFTL*SQPESSLSRAW Trigger: CCAAGCGCGTGACAAGGAGGATTCAGGCTGTGAGCACAGAGTGAACAACTCCACCCCAGAGTTAGCTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS TCA 72 bp | GGAGGGTTGGCTGGGACTTGGGAAATTATGTACCGCTaGAGTCCAAAGTCTGAGAGCTGTGGGCTTCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GGLAGTWEIMYR*SPKSESCGLRR Trigger: TCTGCGAAGCCCACAGCTCTCAGACTTTGGACTTCAGCGGTACATAATTTCCCAAGTCCCAGCCAACCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS CCA 72 bp | TTCTTTGAGGCTGGCAGCTGTCTGGGGAGGGTTGGCTaGGACTTGGGAAATTATGTACCGCTGAAGTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: FFEAGSCLGRVG*DLGNYVPLKSK Trigger: TTTGGACTTCAGCGGTACATAATTTCCCAAGTCCCAGCCAACCCTCCCCAGACAGCTGCCAGCCTCAAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS CCA 72 bp | TCAGCTACACGTTCTTCTTTGAGGCTGGCAGCTGTCTaGGGAGGGTTGGCTGGGACTTGGGAAATTATGTAC | + |
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Preference number: 6 (lower is better) Translates to: SATRSSLRLAAV*GGLAGTWEIMY Trigger: GTACATAATTTCCCAAGTCCCAGCCAACCCTCCCCAGACAGCTGCCAGCCTCAAAGAAGAACGTGTAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS TCA 72 bp | GACTTGGGAAATTATGTACCGCTGAAGTCCAAAGTCTaGGAGCTGTGGGCTTCGCAGAGGCTCTTCAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: DLGNYVPLKSKV*ELWASQRLFRN Trigger: GTTTCTGAAGAGCCTCTGCGAAGCCCACAGCTCTCAGACTTTGGACTTCAGCGGTACATAATTTCCCAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS CCA 72 bp | CCTTTTGAATGTCTTTACACACAGCTAACTCTGGGGTaGAGTTGTTCACTCTGTGCTCACAGCCTGAATCCT | + |
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Preference number: 6 (lower is better) Translates to: PFECLYTQLTLG*SCSLCAHSLNP Trigger: AGGATTCAGGCTGTGAGCACAGAGTGAACAACTCCACCCCAGAGTTAGCTGTGTGTAAAGACATTCAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS CCA 72 bp | CGTTTTCTTCCATCTGCTGGATTATGGGACCAGGAATaGCAAAAGAATTATCACTGGTCACAGGCCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: RFLPSAGLWDQE*QKNYHWSQAQF Trigger: GAACTGGGCCTGTGACCAGTGATAATTCTTTTGCCATTCCTGGTCCCATAATCCAGCAGATGGAAGAAAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS CCA 72 bp | GGAGAAGCTAGGTTTGAGCTGTGCTTTGTTATCATCTaGAGAATGTCTTCTGGAATCGCAGTAACTTTCGGA | + |
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Preference number: 6 (lower is better) Translates to: GEARFELCFVII*RMSSGIAVTFG Trigger: TCCGAAAGTTACTGCGATTCCAGAAGACATTCTCCAGATGATAACAAAGCACAGCTCAAACCTAGCTTCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS CCA 72 bp | CGTATTCCACATCGTTTTCTTCCATCTGCTGGATTATaGGACCAGGAATGGCAAAAGAATTATCACTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: RIPHRFLPSAGL*DQEWQKNYHWS Trigger: TGACCAGTGATAATTCTTTTGCCATTCCTGGTCCCATAATCCAGCAGATGGAAGAAAACGATGTGGAATACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS TCA 72 bp | TTTCAAACCAGGAGTGCAGAATTTAGGTGGCAATGGTaGACTTACGTATTCCACATCGTTTTCTTCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: FQTRSAEFRWQW*TYVFHIVFFHL Trigger: CAGATGGAAGAAAACGATGTGGAATACGTAAGTTCACCATTGCCACCTAAATTCTGCACTCCTGGTTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS GCA 72 bp | GGTGAACTTACGTATTCCACATCGTTTTCTTCCATCTaGTGGATTATGGGACCAGGAATGGCAAAAGAATTA | + |
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Preference number: 6 (lower is better) Translates to: GELTYSTSFSSI*WIMGPGMAKEL Trigger: TAATTCTTTTGCCATTCCTGGTCCCATAATCCAGCAGATGGAAGAAAACGATGTGGAATACGTAAGTTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS CCA 72 bp | GAACTTACGTATTCCACATCGTTTTCTTCCATCTGCTaGATTATGGGACCAGGAATGGCAAAAGAATTATCA | + |
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Preference number: 6 (lower is better) Translates to: ELTYSTSFSSIC*IMGPGMAKELS Trigger: TGATAATTCTTTTGCCATTCCTGGTCCCATAATCCAGCAGATGGAAGAAAACGATGTGGAATACGTAAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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| CDS TCA 72 bp | GCATTAACATTATCCTTTAGAGTCTGGACTTCTGAATaGAGGTCATGCAAAATTCTCCCTGGAGAATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: ALTLSFRVWTSE*RSCKILPGESS Trigger: TGAAGATTCTCCAGGGAGAATTTTGCATGACCTTCATTCAGAAGTCCAGACTCTAAAGGATAATGTTAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022536.3 |
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