Pregenerated sensors for SIX5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040841Ensembl transcript IDs: ENSMUST00000049454.6
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCCACAGCCTCTGGCTGGGCTTTGTCCCCAGTTCTCTCTTGGGTaGGTTGTCTGGCAGGTAACCCTTACCCTCAATAGCTCTGTTGTC | + |
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Preference number: 1 (lower is better) Translates to: KPQPLAGLCPQFSLG*VVWQVTLTLNSSVV Trigger: GACAACAGAGCTATTGAGGGTAAGGGTTACCTGCCAGACAACCCACCCAAGAGAGAACTGGGGACAAAGCCCAGCCAGAGGCTGTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR CCA 90 bp | ACCCATCAGCCCTCCTCAACAGGAAGGGCTGTCCCTAGGCCACCCTaGTCTCTCAGGAAATTTTGGGAAATGGGTATCAGTGGGGCTATT | + |
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Preference number: 1 (lower is better) Translates to: THQPSSTGRAVPRPP*SLRKFWEMGISGAI Trigger: AATAGCCCCACTGATACCCATTTCCCAAAATTTCCTGAGAGACCAGGGTGGCCTAGGGACAGCCCTTCCTGTTGAGGAGGGCTGATGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR CCA 90 bp | ACAGGAAGGGCTGTCCCTAGGCCACCCTGGTCTCTCAGGAAATTTTaGGAAATGGGTATCAGTGGGGCTATTAATAGTGTTATAGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: TGRAVPRPPWSLRKF*EMGISGAINSVIVR Trigger: CCTCACTATAACACTATTAATAGCCCCACTGATACCCATTTCCCAAAATTTCCTGAGAGACCAGGGTGGCCTAGGGACAGCCCTTCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGCTCAAGTCCAGGGAAGCAGGGGAAGGGCCCTGTACACCCATCAGCCCTGGAAATTTTGGGAAATaGGTATCAGTGGGGCTATTA | + |
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Preference number: 2 (lower is better) Translates to: LELKSREAGEGPCTPISPGNFGK*VSVGLL Trigger: TAATAGCCCCACTGATACCCATTTCCCAAAATTTCC...AGGGCTGATGGGTGTACAGGGCCCTTCCCCTGCTTCCCTGGACTTGAGCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR-3UTR CCA 90 bp | CCTAGGCCACCCTGGTCTCTCAGGAAATTTTGGGAAATGGGTATCAGTGGGGCTTGGAAATTAGCCACTTaGCAGGGCCTTCTCACACTA | + |
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Preference number: 2 (lower is better) Translates to: PRPPWSLRKFWEMGISGAWKLAT*QGLLTL Trigger: TAGTGTGAGAAGGCCCTGCCAAGTGGCTAATTTCCA...AGCCCCACTGATACCCATTTCCCAAAATTTCCTGAGAGACCAGGGTGGCCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR-3UTR GCA 90 bp | ATGGGATCTGAGACCAGCCTGGGCTATATAAAACATGATCCCCATCTCACAACCCAAAGGGGCCAGAGTTaGCCTAGGGAACAGGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: MGSETSLGYIKHDPHLTTQRGQS*PREQGN Trigger: ATTTCCCTGTTCCCTAGGGCAACTCTGGCCCCTTTG...GGTTGTGAGATGGGGATCATGTTTTATATAGCCCAGGCTGGTCTCAGATCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR-3UTR CCA 90 bp | AGAGTTGCCCTAGGGAACAGGGAAATCTTTGGTCTGGGGCTGGATCCTGGAGCTTCTCTCAGGAAATTTTaGGAAATGGGTATCAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: RVALGNREIFGLGLDPGASLRKF*EMGISG Trigger: CCCACTGATACCCATTTCCCAAAATTTCCTGAGAGA...AGCTCCAGGATCCAGCCCCAGACCAAAGATTTCCCTGTTCCCTAGGGCAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR-3UTR CCA 90 bp | AAGATGGGATCTGAGACCAGCCTGGGCTATATAAAACATGATCCCCATCTCACAAGTGCCCACACATATTaGGCAGGCAGAGCAAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: KMGSETSLGYIKHDPHLTSAHTY*AGRARR Trigger: TCTCCTTGCTCTGCCTGCCCAATATGTGTGGGCACT...TGTGAGATGGGGATCATGTTTTATATAGCCCAGGCTGGTCTCAGATCCCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR CCA 72 bp | AGGGAACAGGGAAATCTTTGGTCTGGGGCTGGATCCTaGAGCTCAAGTCCAGGGAAGCAGGGGAAGGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: REQGNLWSGAGS*SSSPGKQGKGP Trigger: AGGGCCCTTCCCCTGCTTCCCTGGACTTGAGCTCCAGGATCCAGCCCCAGACCAAAGATTTCCCTGTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR CCA 72 bp | AGGGGCCAGAGTTGCCCTAGGGAACAGGGAAATCTTTaGTCTGGGGCTGGATCCTGGAGCTCAAGTCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: RGQSCPREQGNL*SGAGSWSSSPG Trigger: CCCTGGACTTGAGCTCCAGGATCCAGCCCCAGACCAAAGATTTCCCTGTTCCCTAGGGCAACTCTGGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR GCA 72 bp | GGGCAGGCAGAGCAAGGAGAGGGCTGTAACAAGATCTaGCATCAGGAGGACAGTTCCCTGACCTGTGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: GQAEQGEGCNKI*HQEDSSLTCGG Trigger: ACCACCACAGGTCAGGGAACTGTCCTCCTGATGGCAGATCTTGTTACAGCCCTCTCCTTGCTCTGCCTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR CCA 72 bp | ACAGCCTCTGGCTGGGCTTTGTCCCCAGTTCTCTCTTaGGTGGGTTGTCTGGCAGGTAACCCTTACCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: TASGWALSPVLS*VGCLAGNPYPQ Trigger: TTGAGGGTAAGGGTTACCTGCCAGACAACCCACCCAAGAGAGAACTGGGGACAAAGCCCAGCCAGAGGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR-3UTR CAA 90 bp | CTGGAGCTCAAGTCCAGGGAAGCAGGGGAAGGGCCCTGTACACCCATCAGCCCTGTCTCTCAGGAAATTTaGGGAAATGGGTATCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: LELKSREAGEGPCTPISPVSQEI*GNGYQW Trigger: CCACTGATACCCATTTCCCAAAATTTCCTGAGAGAC...AGGGCTGATGGGTGTACAGGGCCCTTCCCCTGCTTCCCTGGACTTGAGCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR TCA 72 bp | GCTGTAACAAGATCTGCCATCAGGAGGACAGTTCCCTaGCCTGTGGTGGTCCCTGTAGCTCCTGTAGGGCTT | + |
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Preference number: 3 (lower is better) Translates to: AVTRSAIRRTVP*PVVVPVAPVGL Trigger: AAGCCCTACAGGAGCTACAGGGACCACCACAGGTCAGGGAACTGTCCTCCTGATGGCAGATCTTGTTACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR CCA 72 bp | CCCTCCTCAACAGGAAGGGCTGTCCCTAGGCCACCCTaGTCTCTCAGGAAATTTTGGGAAATGGGTATCAGT | + |
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Preference number: 3 (lower is better) Translates to: PSSTGRAVPRPP*SLRKFWEMGIS Trigger: ACTGATACCCATTTCCCAAAATTTCCTGAGAGACCAGGGTGGCCTAGGGACAGCCCTTCCTGTTGAGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR CCA 72 bp | GGGCTTTGTCCCCAGTTCTCTCTTGGGTGGGTTGTCTaGCAGGTAACCCTTACCCTCAATAGCTCTGTTGTC | + |
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Preference number: 3 (lower is better) Translates to: GLCPQFSLGWVV*QVTLTLNSSVV Trigger: GACAACAGAGCTATTGAGGGTAAGGGTTACCTGCCAGACAACCCACCCAAGAGAGAACTGGGGACAAAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR CCA 72 bp | GCTGTCCCTAGGCCACCCTGGTCTCTCAGGAAATTTTaGGAAATGGGTATCAGTGGGGCTATTAATAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: AVPRPPWSLRKF*EMGISGAINSV Trigger: AACACTATTAATAGCCCCACTGATACCCATTTCCCAAAATTTCCTGAGAGACCAGGGTGGCCTAGGGACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR GCA 72 bp | AGATTTACAATACAAACTAGACAAAGGGGCCAGAGTTaGCCTAGGGAACAGGGAAATCTTTGGTCTGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: RFTIQTRQRGQS*PREQGNLWSGA Trigger: AGCCCCAGACCAAAGATTTCCCTGTTCCCTAGGGCAACTCTGGCCCCTTTGTCTAGTTTGTATTGTAAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR-3UTR CAA 90 bp | CCCTGGTCTCTCAGGAAATTTTGGGAAATGGGTATCAGTGGGGCTATTAATAGTTCCTGTCCTAGCACCTaGACACCATTGTCAGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: PWSLRKFWEMGISGAINSSCPST*TPLSEE Trigger: TTCTTCTGACAATGGTGTCAAGGTGCTAGGACAGGA...ACTATTAATAGCCCCACTGATACCCATTTCCCAAAATTTCCTGAGAGACCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR CCA 72 bp | TGTTATAGTGAGGGTGCCATCTGGAAATTAGCCACTTaGCAGGGCCTTCTCACACTAGTATTATGTAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: CYSEGAIWKLAT*QGLLTLVLCRG Trigger: TCCTCTACATAATACTAGTGTGAGAAGGCCCTGCCAAGTGGCTAATTTCCAGATGGCACCCTCACTATAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| 3UTR-3UTR CAA 90 bp | AAGATGGGATCTGAGACCAGCCTGGGCTATATAAAACATGATCCCCATCTCACAAGCACCTTGACACCATaGTCAGAAGAAGTGGTTAAA | + |
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Preference number: 3 (lower is better) Translates to: KMGSETSLGYIKHDPHLTSTLTP*SEEVVK Trigger: TTTAACCACTTCTTCTGACAATGGTGTCAAGGTGCT...TGTGAGATGGGGATCATGTTTTATATAGCCCAGGCTGGTCTCAGATCCCATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR TCA 90 bp | GGAAGGGCCCTGTACACCCATCAGCCCTCCTCAACAGGAAGGGCTGTCCCTAGGCGCGGTAGCAGGCCTTaGGCGCCGCTCGCGAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: GRALYTHQPSSTGRAVPRRGSRP*APLASA Trigger: AGCGCTCGCGAGCGGCGCTCAAGGCCTGCTACCGCG...CCTAGGGACAGCCCTTCCTGTTGAGGAGGGCTGATGGGTGTACAGGGCCCTTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR GCA 90 bp | CAGCCCTCCTCAACAGGAAGGGCTGTCCCTAGGCCACCCTGGTCTCTCAGGAAACACCGCCGGTCCCAGTaGGGTCGCGCTGTCGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: QPSSTGRAVPRPPWSLRKHRRSQ*GRAVAG Trigger: ACCGGCGACAGCGCGACCGCACTGGGACCGGCGGTG...TTTCCTGAGAGACCAGGGTGGCCTAGGGACAGCCCTTCCTGTTGAGGAGGGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | GGGGAAGGGCCCTGTACACCCATCAGCCCTCCTCAACAGGAAGGGCTGTCCCTAGACCCTCTGGGAGGGTaGGGCTGGGGCCCACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: GEGPCTPISPPQQEGLSLDPLGG*GWGPLG Trigger: TCCCAGTGGGCCCCAGCCCCACCCTCCCAGAGGGTC...TAGGGACAGCCCTTCCTGTTGAGGAGGGCTGATGGGTGTACAGGGCCCTTCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR GCA 90 bp | TCCAGGGAAGCAGGGGAAGGGCCCTGTACACCCATCAGCCCTCCTCAACAGGAAGGAGGCAGGGCACGTTaGAGGAGAGGTGGCCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: SREAGEGPCTPISPPQQEGGRAR*RRGGPR Trigger: GCGGGGGCCACCTCTCCTGCAACGTGCCCTGCCTCC...TTCCTGTTGAGGAGGGCTGATGGGTGTACAGGGCCCTTCCCCTGCTTCCCTGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR TCA 90 bp | TCTGGGGCTGGATCCTGGAGCTCAAGTCCAGGGAAGCAGGGGAAGGGCCCTGTAGGCAGGGTTACCACCTaGGAGGTGGGCACCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: SGAGSWSSSPGKQGKGPVGRVTT*EVGTTW Trigger: CCAGGTGGTGCCCACCTCTCAGGTGGTAACCCTGCC...TACAGGGCCCTTCCCCTGCTTCCCTGGACTTGAGCTCCAGGATCCAGCCCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR TCA 90 bp | CTGGAGCTCAAGTCCAGGGAAGCAGGGGAAGGGCCCTGTACACCCATCAGCCCTATTGGCCCCAGAGTGTaGCCCTCTGGGAGGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LELKSREAGEGPCTPISPIGPRV*PSGRVG Trigger: CCCCACCCTCCCAGAGGGTCACACTCTGGGGCCAAT...AGGGCTGATGGGTGTACAGGGCCCTTCCCCTGCTTCCCTGGACTTGAGCTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | ACCCATCAGCCCTCCTCAACAGGAAGGGCTGTCCCTAGGCCACCCTGGTCTCTCCTGCTGGGGGACTGCTaGCGGCCAGGAAGCTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: THQPSSTGRAVPRPPWSLLLGDC*RPGSSH Trigger: ATGGGAGCTTCCTGGCCGCCAGCAGTCCCCCAGCAG...GAGAGACCAGGGTGGCCTAGGGACAGCCCTTCCTGTTGAGGAGGGCTGATGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | AGGGGCCAGAGTTGCCCTAGGGAACAGGGAAATCTTTGGTCTGGGGCTGGATCCCTGGGAGGGTGGGGCTaGGGCCCACTGGGAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: RGQSCPREQGNLWSGAGSLGGWG*GPLGEL Trigger: GAGCTCTCCCAGTGGGCCCCAGCCCCACCCTCCCAG...GGATCCAGCCCCAGACCAAAGATTTCCCTGTTCCCTAGGGCAACTCTGGCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR GCA 90 bp | GGGGAAGGGCCCTGTACACCCATCAGCCCTCCTCAACAGGAAGGGCTGTCCCTAGCTGCCTGCAGAGTCTaGAGAAGCTGGCGCGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GEGPCTPISPPQQEGLSLAACRV*RSWRAS Trigger: GGAAGCGCGCCAGCTTCTGCAGACTCTGCAGGCAGC...TAGGGACAGCCCTTCCTGTTGAGGAGGGCTGATGGGTGTACAGGGCCCTTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR GCA 90 bp | GGAAGGGCCCTGTACACCCATCAGCCCTCCTCAACAGGAAGGGCTGTCCCTAGGGCTCAGTTCCAGCCCTaGTGGCCAGACTGGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: GRALYTHQPSSTGRAVPRAQFQP*WPDWHS Trigger: GCTGTGCCAGTCTGGCCAGCAGGGCTGGAACTGAGC...CCTAGGGACAGCCCTTCCTGTTGAGGAGGGCTGATGGGTGTACAGGGCCCTTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | CAGCCCTCCTCAACAGGAAGGGCTGTCCCTAGGCCACCCTGGTCTCTCAGGAAAGGGCCTCAGCAGCCATaGAGGCCACACCCCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: QPSSTGRAVPRPPWSLRKGPQQP*RPHPSP Trigger: TGGAGAGGGGTGTGGCCTCCATGGCTGCTGAGGCCC...TTTCCTGAGAGACCAGGGTGGCCTAGGGACAGCCCTTCCTGTTGAGGAGGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | TCCAGGGAAGCAGGGGAAGGGCCCTGTACACCCATCAGCCCTCCTCAACAGGAACCCAGAAGCAGTCCCTaGGGGTCAGGGTCTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SREAGEGPCTPISPPQQEPRSSP*GSGSGS Trigger: GCTGCCAGACCCTGACCCCCAGGGACTGCTTCTGGG...TTCCTGTTGAGGAGGGCTGATGGGTGTACAGGGCCCTTCCCCTGCTTCCCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | CAGCCCTCCTCAACAGGAAGGGCTGTCCCTAGGCCACCCTGGTCTCTCAGGAAAGCTTCTCGTCAGGCGTaGGATAGCGGTTGCCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: QPSSTGRAVPRPPWSLRKASRQA*DSGCRG Trigger: ACCGCGGCAACCGCTATCCCACGCCTGACGAGAAGC...TTTCCTGAGAGACCAGGGTGGCCTAGGGACAGCCCTTCCTGTTGAGGAGGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | TCCAGGGAAGCAGGGGAAGGGCCCTGTACACCCATCAGCCCTCCTCAACAGGAAACGTTGCAGGAGAGGTaGCCCCCGCCAGGAAGATGG | + |
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Preference number: 4 (lower is better) Translates to: SREAGEGPCTPISPPQQETLQER*PPPGRW Trigger: CCATCTTCCTGGCGGGGGCCACCTCTCCTGCAACGT...TTCCTGTTGAGGAGGGCTGATGGGTGTACAGGGCCCTTCCCCTGCTTCCCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | TCCAGGGAAGCAGGGGAAGGGCCCTGTACACCCATCAGCCCTCCTCAACAGGAAATTGAGGAGCACTGCTaGGGGACTGCTGGCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SREAGEGPCTPISPPQQEIEEHC*GTAGGQ Trigger: CTGGCCGCCAGCAGTCCCCCAGCAGTGCTCCTCAAT...TTCCTGTTGAGGAGGGCTGATGGGTGTACAGGGCCCTTCCCCTGCTTCCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | CAGCCCTCCTCAACAGGAAGGGCTGTCCCTAGGCCACCCTGGTCTCTCAGGAAAGGGCCTGGGACTACTTaGGGCAGGGCTCCTGGGATT | + |
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Preference number: 4 (lower is better) Translates to: QPSSTGRAVPRPPWSLRKGPGTT*GRAPGI Trigger: AATCCCAGGAGCCCTGCCCCAAGTAGTCCCAGGCCC...TTTCCTGAGAGACCAGGGTGGCCTAGGGACAGCCCTTCCTGTTGAGGAGGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | ATCTTTGGTCTGGGGCTGGATCCTGGAGCTCAAGTCCAGGGAAGCAGGGGAAGGTCAGCCGTGGGGAGGTaGGGCTCAGGCCTGTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: IFGLGLDPGAQVQGSRGRSAVGR*GSGLLG Trigger: ACCCAACAGGCCTGAGCCCCACCTCCCCACGGCTGA...CCTTCCCCTGCTTCCCTGGACTTGAGCTCCAGGATCCAGCCCCAGACCAAAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | GGGGAAGGGCCCTGTACACCCATCAGCCCTCCTCAACAGGAAGGGCTGTCCCTATCAGCACAGTGTGGGTaGCCTGTGTCCCCAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: GEGPCTPISPPQQEGLSLSAQCG*PVSPAL Trigger: AAGGGCTGGGGACACAGGCCACCCACACTGTGCTGA...TAGGGACAGCCCTTCCTGTTGAGGAGGGCTGATGGGTGTACAGGGCCCTTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | CTGGAGCTCAAGTCCAGGGAAGCAGGGGAAGGGCCCTGTACACCCATCAGCCCTGGTACCGACTGCAGCTaGGTCAGGACCTTGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LELKSREAGEGPCTPISPGTDCS*VRTLAS Trigger: TGAGGCCAAGGTCCTGACCCAGCTGCAGTCGGTACC...AGGGCTGATGGGTGTACAGGGCCCTTCCCCTGCTTCCCTGGACTTGAGCTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR GCA 90 bp | ATCTTTGGTCTGGGGCTGGATCCTGGAGCTCAAGTCCAGGGAAGCAGGGGAAGGCCAGGTCCTCTGGACTaGGGCTGGACTCATCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: IFGLGLDPGAQVQGSRGRPGPLD*GWTHPP Trigger: CGGAGGATGAGTCCAGCCGCAGTCCAGAGGACCTGG...CCTTCCCCTGCTTCCCTGGACTTGAGCTCCAGGATCCAGCCCCAGACCAAAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | ACCCATCAGCCCTCCTCAACAGGAAGGGCTGTCCCTAGGCCACCCTGGTCTCTCTTGGAGACTGGGCTGTaGTTGAGGGGCACTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: THQPSSTGRAVPRPPWSLLETGL*LRGTSS Trigger: GGAGGAAGTGCCCCTCAACCACAGCCCAGTCTCCAA...GAGAGACCAGGGTGGCCTAGGGACAGCCCTTCCTGTTGAGGAGGGCTGATGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | ACCCATCAGCCCTCCTCAACAGGAAGGGCTGTCCCTAGGCCACCCTGGTCTCTCTTACCACCTGAGAGGTaGGCACCACCTGGGGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: THQPSSTGRAVPRPPWSLLPPER*APPGAS Trigger: ACTTGCCCCAGGTGGTGCCCACCTCTCAGGTGGTAA...GAGAGACCAGGGTGGCCTAGGGACAGCCCTTCCTGTTGAGGAGGGCTGATGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR TCA 90 bp | ATCTTTGGTCTGGGGCTGGATCCTGGAGCTCAAGTCCAGGGAAGCAGGGGAAGGTCAGGGGCCTCAGACTaGGCCTCATCCAGTCGAACC | + |
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Preference number: 4 (lower is better) Translates to: IFGLGLDPGAQVQGSRGRSGASD*ASSSRT Trigger: GGTTCGACTGGATGAGGCTCAGTCTGAGGCCCCTGA...CCTTCCCCTGCTTCCCTGGACTTGAGCTCCAGGATCCAGCCCCAGACCAAAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR GCA 90 bp | ATCTTTGGTCTGGGGCTGGATCCTGGAGCTCAAGTCCAGGGAAGCAGGGGAAGGATTGGTAGGCCCCGCTaGAGCTGCCACCTTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: IFGLGLDPGAQVQGSRGRIGRPR*SCHLHR Trigger: CCTGTGAAGGTGGCAGCTGCAGCGGGGCCTACCAAT...CCTTCCCCTGCTTCCCTGGACTTGAGCTCCAGGATCCAGCCCCAGACCAAAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR GCA 90 bp | ATCTTTGGTCTGGGGCTGGATCCTGGAGCTCAAGTCCAGGGAAGCAGGGGAAGGTCCACGGGTACCGACTaGAGCTGGGTCAGGACCTTG | + |
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Preference number: 4 (lower is better) Translates to: IFGLGLDPGAQVQGSRGRSTGTD*SWVRTL Trigger: CAAGGTCCTGACCCAGCTGCAGTCGGTACCCGTGGA...CCTTCCCCTGCTTCCCTGGACTTGAGCTCCAGGATCCAGCCCCAGACCAAAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | ATCTTTGGTCTGGGGCTGGATCCTGGAGCTCAAGTCCAGGGAAGCAGGGGAAGGAGAGTCTGCAGAAGCTaGCGCGCTTCCTCCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: IFGLGLDPGAQVQGSRGRRVCRS*RASSSC Trigger: GCAGGAGGAGGAAGCGCGCCAGCTTCTGCAGACTCT...CCTTCCCCTGCTTCCCTGGACTTGAGCTCCAGGATCCAGCCCCAGACCAAAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | CCTGTAGCTCCTGTAGGGCTTATAGCTTATCCAGGTAGGAGAGCTGTAGTGTGGTGCAGGAAGGCGTGGTaGGCGGCGGGGAAAGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PVAPVGLIAYPGRRAVVWCRKAW*AAGKGR Trigger: CCGCCCTTTCCCCGCCGCCCACCACGCCTTCCTGCA...CCACACTACAGCTCTCCTACCTGGATAAGCTATAAGCCCTACAGGAGCTACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR TCA 90 bp | AGAGTTGCCCTAGGGAACAGGGAAATCTTTGGTCTGGGGCTGGATCCTGGAGCTGGGCACTTCCTCCTGTaGGTAGCAAGGGCCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVALGNREIFGLGLDPGAGHFLL*VARAPS Trigger: GCTTGGGGCCCTTGCTACTCACAGGAGGAAGTGCCC...AGCTCCAGGATCCAGCCCCAGACCAAAGATTTCCCTGTTCCCTAGGGCAACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR GCA 90 bp | CCTAGGCCACCCTGGTCTCTCAGGAAATTTTGGGAAATGGGTATCAGTGGGGCTACTGCCTGGCCCAGCTaGCAACAGCTGGAGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRPPWSLRKFWEMGISGATAWPS*QQLEWP Trigger: GGGCCACTCCAGCTGTTGGCAGCTGGGCCAGGCAGT...AGCCCCACTGATACCCATTTCCCAAAATTTCCTGAGAGACCAGGGTGGCCTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | GCTGTCCCTAGGCCACCCTGGTCTCTCAGGAAATTTTGGGAAATGGGTATCAGTTCCTGCAGGAAGGCGTaGTGGGCGGCGGGGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVPRPPWSLRKFWEMGISSCRKA*WAAGKG Trigger: CCCTTTCCCCGCCGCCCACCACGCCTTCCTGCAGGA...ACTGATACCCATTTCCCAAAATTTCCTGAGAGACCAGGGTGGCCTAGGGACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | TGCCCTAGGGAACAGGGAAATCTTTGGTCTGGGGCTGGATCCTGGAGCTCAAGTTGCCAACAGCTGGAGTaGCCCCACAGCCTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPREQGNLWSGAGSWSSSCQQLE*PHSLRQ Trigger: CTGCCTCAGGCTGTGGGGCCACTCCAGCTGTTGGCA...ACTTGAGCTCCAGGATCCAGCCCCAGACCAAAGATTTCCCTGTTCCCTAGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | CAGCCCTCCTCAACAGGAAGGGCTGTCCCTAGGCCACCCTGGTCTCTCAGGAAAAGTTTCCTGGAGCAGTaGACGAGGGAAGTTGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QPSSTGRAVPRPPWSLRKSFLEQ*TREVAA Trigger: CGCTGCAACTTCCCTCGTCCACTGCTCCAGGAAACT...TTTCCTGAGAGACCAGGGTGGCCTAGGGACAGCCCTTCCTGTTGAGGAGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | CCTGTAGCTCCTGTAGGGCTTATAGCTTATCCAGGTAGGAGAGCTGTAGTGTGGGGGGCTGGGGCCCACTaGGAGAGCTCCTTCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PVAPVGLIAYPGRRAVVWGAGAH*ESSFRH Trigger: GTGCCTGAAGGAGCTCTCCCAGTGGGCCCCAGCCCC...CCACACTACAGCTCTCCTACCTGGATAAGCTATAAGCCCTACAGGAGCTACAGG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | TGCCCTAGGGAACAGGGAAATCTTTGGTCTGGGGCTGGATCCTGGAGCTCAAGTCAGTTCCAGCCCTGCTaGCCAGACTGGCACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CPREQGNLWSGAGSWSSSQFQPC*PDWHSC Trigger: GCAGCTGTGCCAGTCTGGCCAGCAGGGCTGGAACTG...ACTTGAGCTCCAGGATCCAGCCCCAGACCAAAGATTTCCCTGTTCCCTAGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR GCA 90 bp | CCTAGGCCACCCTGGTCTCTCAGGAAATTTTGGGAAATGGGTATCAGTGGGGCTTCCCCCTCGGCTGCCTaGAGAGTCTGCAGAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRPPWSLRKFWEMGISGASPSAA*RVCRSW Trigger: CCAGCTTCTGCAGACTCTGCAGGCAGCCGAGGGGGA...AGCCCCACTGATACCCATTTCCCAAAATTTCCTGAGAGACCAGGGTGGCCTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR GCA 90 bp | ATGGGATCTGAGACCAGCCTGGGCTATATAAAACATGATCCCCATCTCACAACCGCAGCACCGGATCGCTaGCACGTAGGCGCTCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: MGSETSLGYIKHDPHLTTAAPDR*HVGARP Trigger: CGGCCGAGCGCCTACGTGGCAGCGATCCGGTGCTGC...GGTTGTGAGATGGGGATCATGTTTTATATAGCCCAGGCTGGTCTCAGATCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR GCA 90 bp | ATCTTTGGTCTGGGGCTGGATCCTGGAGCTCAAGTCCAGGGAAGCAGGGGAAGGGTGATAGCTGGCTCTTaGTTCAGGGGCAGGGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IFGLGLDPGAQVQGSRGRVIAGS*FRGRAR Trigger: TCTAGCCCTGCCCCTGAAGCAAGAGCCAGCTATCAC...CCTTCCCCTGCTTCCCTGGACTTGAGCTCCAGGATCCAGCCCCAGACCAAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | CCTGTAGCTCCTGTAGGGCTTATAGCTTATCCAGGTAGGAGAGCTGTAGTGTGGGCGTATTCACCCCGCTaGAAGGCCACTAGGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PVAPVGLIAYPGRRAVVWAYSPR*KATRAR Trigger: GCGGGCCCTAGTGGCCTTCCAGCGGGGTGAATACGC...CCACACTACAGCTCTCCTACCTGGATAAGCTATAAGCCCTACAGGAGCTACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | AGGGGCCAGAGTTGCCCTAGGGAACAGGGAAATCTTTGGTCTGGGGCTGGATCCTCCCATGAACCCCTTTaGTCTCAGGGGCCTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: RGQSCPREQGNLWSGAGSSHEPL*SQGPQT Trigger: AGTCTGAGGCCCCTGAGACCAAAGGGGTTCATGGGA...GGATCCAGCCCCAGACCAAAGATTTCCCTGTTCCCTAGGGCAACTCTGGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | TGCCCTAGGGAACAGGGAAATCTTTGGTCTGGGGCTGGATCCTGGAGCTCAAGTGGGGCTCAGGCCTGTTaGGTACCCAGAAGAAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CPREQGNLWSGAGSWSSSGAQAC*VPRRRG Trigger: TCCCCTTCTTCTGGGTACCCAACAGGCCTGAGCCCC...ACTTGAGCTCCAGGATCCAGCCCCAGACCAAAGATTTCCCTGTTCCCTAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | CCTAGGCCACCCTGGTCTCTCAGGAAATTTTGGGAAATGGGTATCAGTGGGGCTAGCCTCAGCACAGTGTaGGTGGCCTGTGTCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRPPWSLRKFWEMGISGASLSTV*VACVPS Trigger: GCTGGGGACACAGGCCACCCACACTGTGCTGAGGCT...AGCCCCACTGATACCCATTTCCCAAAATTTCCTGAGAGACCAGGGTGGCCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | CCTAGGCCACCCTGGTCTCTCAGGAAATTTTGGGAAATGGGTATCAGTGGGGCTCTGGGGGTCAGGGTCTaGCAGCCTCAGCACAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRPPWSLRKFWEMGISGALGVRV*QPQHSV Trigger: CACACTGTGCTGAGGCTGCCAGACCCTGACCCCCAG...AGCCCCACTGATACCCATTTCCCAAAATTTCCTGAGAGACCAGGGTGGCCTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR TCA 90 bp | TGCCCTAGGGAACAGGGAAATCTTTGGTCTGGGGCTGGATCCTGGAGCTCAAGTCTCGCGAGCGCTCCTTaGAGCAATAGACGGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CPREQGNLWSGAGSWSSSLASAP*SNRRSP Trigger: AGGAGACCGTCTATTGCTTCAAGGAGCGCTCGCGAG...ACTTGAGCTCCAGGATCCAGCCCCAGACCAAAGATTTCCCTGTTCCCTAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR GCA 90 bp | ATGGGATCTGAGACCAGCCTGGGCTATATAAAACATGATCCCCATCTCACAACCGCACTGCTGGGGGACTaGTGGCGGCCAGGAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MGSETSLGYIKHDPHLTTALLGD*WRPGSS Trigger: GGAGCTTCCTGGCCGCCAGCAGTCCCCCAGCAGTGC...GGTTGTGAGATGGGGATCATGTTTTATATAGCCCAGGCTGGTCTCAGATCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | CCTAGGCCACCCTGGTCTCTCAGGAAATTTTGGGAAATGGGTATCAGTGGGGCTAAAGGTGGAGGCAGGTaGGGGGCCTGGGACTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRPPWSLRKFWEMGISGAKGGGR*GAWDYL Trigger: CAAGTAGTCCCAGGCCCCCCACCTGCCTCCACCTTT...AGCCCCACTGATACCCATTTCCCAAAATTTCCTGAGAGACCAGGGTGGCCTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | TCCAGGGAAGCAGGGGAAGGGCCCTGTACACCCATCAGCCCTCCTCAACAGGAAGACAACAGAAGCAGGTaGCAGTGGCTGAGTAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SREAGEGPCTPISPPQQEDNRSR*QWLSRD Trigger: ATCTCTACTCAGCCACTGCCACCTGCTTCTGTTGTC...TTCCTGTTGAGGAGGGCTGATGGGTGTACAGGGCCCTTCCCCTGCTTCCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | AGAGTTGCCCTAGGGAACAGGGAAATCTTTGGTCTGGGGCTGGATCCTGGAGCTTTGGGGCAGGGCTCCTaGGATTTCCTCTCCAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVALGNREIFGLGLDPGALGQGS*DFLSSS Trigger: ACTACTGGAGAGGAAATCCCAGGAGCCCTGCCCCAA...AGCTCCAGGATCCAGCCCCAGACCAAAGATTTCCCTGTTCCCTAGGGCAACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR TCA 90 bp | GCTGTCCCTAGGCCACCCTGGTCTCTCAGGAAATTTTGGGAAATGGGTATCAGTCGAACCTCTCCTGTCTaGGGGTCCAGGACCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AVPRPPWSLRKFWEMGISRTSPV*GSRTRE Trigger: TTCTCTGGTCCTGGACCCTCAGACAGGAGAGGTTCG...ACTGATACCCATTTCCCAAAATTTCCTGAGAGACCAGGGTGGCCTAGGGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR TCA 90 bp | CCTGTAGCTCCTGTAGGGCTTATAGCTTATCCAGGTAGGAGAGCTGTAGTGTGGTGGCACAGCTGCAGGTaGCAACATCAGACCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVAPVGLIAYPGRRAVVWWHSCR*QHQTFR Trigger: CCTGAAGGTCTGATGTTGTCACCTGCAGCTGTGCCA...CCACACTACAGCTCTCCTACCTGGATAAGCTATAAGCCCTACAGGAGCTACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | GCTGTCCCTAGGCCACCCTGGTCTCTCAGGAAATTTTGGGAAATGGGTATCAGTAGGCACTGTGATAGCTaGCTCTTGCTTCAGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVPRPPWSLRKFWEMGISRHCDS*LLLQGQ Trigger: CTGCCCCTGAAGCAAGAGCCAGCTATCACAGTGCCT...ACTGATACCCATTTCCCAAAATTTCCTGAGAGACCAGGGTGGCCTAGGGACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR TCA 90 bp | AAGATGGGATCTGAGACCAGCCTGGGCTATATAAAACATGATCCCCATCTCACAAGACTGGGCTGTGGTTaGGGGGCACTTCCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KMGSETSLGYIKHDPHLTRLGCG*GALPPV Trigger: CACAGGAGGAAGTGCCCCTCAACCACAGCCCAGTCT...TGTGAGATGGGGATCATGTTTTATATAGCCCAGGCTGGTCTCAGATCCCATCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | AAGATGGGATCTGAGACCAGCCTGGGCTATATAAAACATGATCCCCATCTCACACCTCGCCATCCCAGATaGTCTTGGGCAGAGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KMGSETSLGYIKHDPHLTPRHPR*SWAEGT Trigger: AGTTCCCTCTGCCCAAGACCATCTGGGATGGCGAGG...TGTGAGATGGGGATCATGTTTTATATAGCCCAGGCTGGTCTCAGATCCCATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | ATGGGATCTGAGACCAGCCTGGGCTATATAAAACATGATCCCCATCTCACAACCTACCAGACACAGGGTTaGCCAGGAGGAAGTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MGSETSLGYIKHDPHLTTYQTQG*PGGSFL Trigger: CAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGTA...GGTTGTGAGATGGGGATCATGTTTTATATAGCCCAGGCTGGTCTCAGATCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CCA 90 bp | TTACCCTCAATAGCTCTGTTGTCTGTTTACTTGACTTTAATTGAAATGGAGGCAGCAGGAGGCAGGACCTaGGAGACGAGCATGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSIALLSVYLTLIEMEAAGGRT*ETSMLV Trigger: CACCAGCATGCTCGTCTCCCAGGTCCTGCCTCCTGC...TGCCTCCATTTCAATTAAAGTCAAGTAAACAGACAACAGAGCTATTGAGGGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS GCA 90 bp | CGCCGCCGCATCTCCCGCCCCGGCCGCCGCCGCCTCCCCCTCGGCTaGCTGCAGAGTCTGCAGAAGCTGGCGCGCTTCCTCCTCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RRRISRPGRRRLPLG*LQSLQKLARFLLLL Trigger: GAGCAGGAGGAGGAAGCGCGCCAGCTTCTGCAGACTCTGCAGGCAGCCGAGGGGGAGGCGGCGGCGGCCGGGGCGGGAGATGCGGCGGCG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS CCA 90 bp | AGGAGGCAGGGCACGTTGCAGGAGAGGTGGCCCCCGCCAGGAAGATaGAACTCTGGGCGGGGGCCTCAGCAGCCATGGAGGCCACACCCC | + |
|
Preference number: 5 (lower is better) Translates to: RRQGTLQERWPPPGR*NSGRGPQQPWRPHP Trigger: GGGGTGTGGCCTCCATGGCTGCTGAGGCCCCCGCCCAGAGTTCCATCTTCCTGGCGGGGGCCACCTCTCCTGCAACGTGCCCTGCCTCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS CCA 90 bp | GCAGTCCCTGGGGGTCAGGGTCTGGCAGCCTCAGCACAGTGTGGGTaGCCTGTGTCCCCAGCCCTTCTACTCCTGTGCTCAGTTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVPGGQGLAASAQCG*PVSPALLLLCSVPA Trigger: GGCTGGAACTGAGCACAGGAGTAGAAGGGCTGGGGACACAGGCCACCCACACTGTGCTGAGGCTGCCAGACCCTGACCCCCAGGGACTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS CCA 90 bp | AGAAGCAGTCCCTGGGGGTCAGGGTCTGGCAGCCTCAGCACAGTGTaGGTGGCCTGTGTCCCCAGCCCTTCTACTCCTGTGCTCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSSPWGSGSGSLSTV*VACVPSPSTPVLSS Trigger: GGAACTGAGCACAGGAGTAGAAGGGCTGGGGACACAGGCCACCCACACTGTGCTGAGGCTGCCAGACCCTGACCCCCAGGGACTGCTTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS CCA 90 bp | CCCTCATCAACCTCAGTCCCTGTTGTAGCCCCCAGAAGCAGTCCCTaGGGGTCAGGGTCTGGCAGCCTCAGCACAGTGTGGGTGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSSTSVPVVAPRSSP*GSGSGSLSTVWVAC Trigger: ACAGGCCACCCACACTGTGCTGAGGCTGCCAGACCCTGACCCCCAGGGACTGCTTCTGGGGGCTACAACAGGGACTGAGGTTGATGAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CAA 90 bp | CTGGAGCTCAAGTCCAGGGAAGCAGGGGAAGGGCCCTGTACACCCATCAGCCCTGGCCTCACTGACCCCTaGGAGACTGGGCTGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LELKSREAGEGPCTPISPGLTDP*ETGLWL Trigger: CAACCACAGCCCAGTCTCCAAGGGGTCAGTGAGGCC...AGGGCTGATGGGTGTACAGGGCCCTTCCCCTGCTTCCCTGGACTTGAGCTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CAA 90 bp | TCCAGGGAAGCAGGGGAAGGGCCCTGTACACCCATCAGCCCTCCTCAACAGGAATTGCGCAGCCGGTATTaGTCCACAGCGCCCAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SREAGEGPCTPISPPQQELRSRY*STAPSA Trigger: TGCGCTGGGCGCTGTGGACAAATACCGGCTGCGCAA...TTCCTGTTGAGGAGGGCTGATGGGTGTACAGGGCCCTTCCCCTGCTTCCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS TCA 90 bp | CCTCTCCTGTCTGAGGGTCCAGGACCAGAGAATTCTTGGCCTCACTaGCCCCTTGGAGACTGGGCTGTGGTTGAGGGGCACTTCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLLSEGPGPENSWPH*PLGDWAVVEGHFLL Trigger: CAGGAGGAAGTGCCCCTCAACCACAGCCCAGTCTCCAAGGGGTCAGTGAGGCCAAGAATTCTCTGGTCCTGGACCCTCAGACAGGAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CAA 90 bp | TCCAGGGAAGCAGGGGAAGGGCCCTGTACACCCATCAGCCCTCCTCAACAGGAAGCGGCTCTCGAGAAGTaGGTAGAGCTCGGCGTATTC | + |
|
Preference number: 5 (lower is better) Translates to: SREAGEGPCTPISPPQQEAALEK*VELGVF Trigger: GAATACGCCGAGCTCTACCAACTTCTCGAGAGCCGC...TTCCTGTTGAGGAGGGCTGATGGGTGTACAGGGCCCTTCCCCTGCTTCCCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CAA 90 bp | GGGGAAGGGCCCTGTACACCCATCAGCCCTCCTCAACAGGAAGGGCTGTCCCTACTACCAGACACAGGGTaGGCCAGGAGGAAGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GEGPCTPISPPQQEGLSLLPDTG*ARRKFP Trigger: AGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGTAG...TAGGGACAGCCCTTCCTGTTGAGGAGGGCTGATGGGTGTACAGGGCCCTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CAA 90 bp | AGGGGCCAGAGTTGCCCTAGGGAACAGGGAAATCTTTGGTCTGGGGCTGGATCCATGACTGGGCTACCATaGAGGAGCACTGCTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RGQSCPREQGNLWSGAGSMTGLP*RSTAGG Trigger: TCCCCCAGCAGTGCTCCTCAATGGTAGCCCAGTCAT...GGATCCAGCCCCAGACCAAAGATTTCCCTGTTCCCTAGGGCAACTCTGGCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CAA 90 bp | CAGCCCTCCTCAACAGGAAGGGCTGTCCCTAGGCCACCCTGGTCTCTCAGGAAAAGGACCAGAGAATTCTaGGCCTCACTGACCCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QPSSTGRAVPRPPWSLRKRTREF*ASLTPW Trigger: CCAAGGGGTCAGTGAGGCCAAGAATTCTCTGGTCCT...TTTCCTGAGAGACCAGGGTGGCCTAGGGACAGCCCTTCCTGTTGAGGAGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CAA 90 bp | TCTGGGGCTGGATCCTGGAGCTCAAGTCCAGGGAAGCAGGGGAAGGGCCCTGTACCTAGGGCCAAGCTATaGATAATGACTGGGCTACCA | + |
|
Preference number: 5 (lower is better) Translates to: SGAGSWSSSPGKQGKGPVPRAKL*IMTGLP Trigger: TGGTAGCCCAGTCATTATCAATAGCTTGGCCCTAGG...TACAGGGCCCTTCCCCTGCTTCCCTGGACTTGAGCTCCAGGATCCAGCCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CAA 90 bp | CCCTGGTCTCTCAGGAAATTTTGGGAAATGGGTATCAGTGGGGCTATTAATAGTGGGGCCTGGGACTACTaGGGGCAGGGCTCCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PWSLRKFWEMGISGAINSGAWDY*GQGSWD Trigger: ATCCCAGGAGCCCTGCCCCAAGTAGTCCCAGGCCCC...ACTATTAATAGCCCCACTGATACCCATTTCCCAAAATTTCCTGAGAGACCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS-3UTR CAA 90 bp | ATGGGATCTGAGACCAGCCTGGGCTATATAAAACATGATCCCCATCTCACAACCGGCAGAGGGAACTTCTaGCGCAGCCGGTATTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: MGSETSLGYIKHDPHLTTGRGNF*RSRYLS Trigger: GGACAAATACCGGCTGCGCAAGAAGTTCCCTCTGCC...GGTTGTGAGATGGGGATCATGTTTTATATAGCCCAGGCTGGTCTCAGATCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS GCA 72 bp | AGGCCACTAGGGCCCGCGCGCGCAGCACCGGATCGCTaGCACGTAGGCGCTCGGCCGGGGGCAGCGCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RPLGPARAAPDR*HVGARPGAARP Trigger: TGGGCGCGCTGCCCCCGGCCGAGCGCCTACGTGGCAGCGATCCGGTGCTGCGCGCGCGGGCCCTAGTGGCCT 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS CCA 72 bp | CGCATGCCACCTGTTCGGGCGAGAAGCGAAGGCCAGTaGGCACCTCGGTCACGGTCTCCCGGGGAGACCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RMPPVRARSEGQ*APRSRSPGETP Trigger: CGGGGTCTCCCCGGGAGACCGTGACCGAGGTGCCCACTGGCCTTCGCTTCTCGCCCGAACAGGTGGCATGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS CCA 72 bp | GCAGGAGAGGTGGCCCCCGCCAGGAAGATGGAACTCTaGGCGGGGGCCTCAGCAGCCATGGAGGCCACACCC | + |
|
Preference number: 6 (lower is better) Translates to: AGEVAPARKMEL*AGASAAMEATP Trigger: GGGTGTGGCCTCCATGGCTGCTGAGGCCCCCGCCCAGAGTTCCATCTTCCTGGCGGGGGCCACCTCTCCTGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS CCA 72 bp | GGCACGTTGCAGGAGAGGTGGCCCCCGCCAGGAAGATaGAACTCTGGGCGGGGGCCTCAGCAGCCATGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GTLQERWPPPGR*NSGRGPQQPWR Trigger: CCTCCATGGCTGCTGAGGCCCCCGCCCAGAGTTCCATCTTCCTGGCGGGGGCCACCTCTCCTGCAACGTGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS CCA 72 bp | TGTAGCCCCCAGAAGCAGTCCCTGGGGGTCAGGGTCTaGCAGCCTCAGCACAGTGTGGGTGGCCTGTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: CSPQKQSLGVRV*QPQHSVGGLCP Trigger: GGGACACAGGCCACCCACACTGTGCTGAGGCTGCCAGACCCTGACCCCCAGGGACTGCTTCTGGGGGCTACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS CCA 72 bp | GGGGGTCAGGGTCTGGCAGCCTCAGCACAGTGTGGGTaGCCTGTGTCCCCAGCCCTTCTACTCCTGTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: GGQGLAASAQCG*PVSPALLLLCS Trigger: TGAGCACAGGAGTAGAAGGGCTGGGGACACAGGCCACCCACACTGTGCTGAGGCTGCCAGACCCTGACCCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS CAA 72 bp | TCATCCTCCGTAGTGGGGTTCCCATCAGACTCGCTTTaGCAAGGCGCTCCACCGCCGGTCCCAGTGCGGTCG | + |
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Preference number: 6 (lower is better) Translates to: SSSVVGFPSDSL*QGAPPPVPVRS Trigger: CGACCGCACTGGGACCGGCGGTGGAGCGCCTTGCAAAAGCGAGTCTGATGGGAACCCCACTACGGAGGATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS CCA 72 bp | AGTTCCAAGGGCTCCTCCACGGGTACCGACTGCAGCTaGGTCAGGACCTTGGCCTCAGCTTCTAGCCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SSKGSSTGTDCS*VRTLASASSPS Trigger: TGAGGGGCTAGAAGCTGAGGCCAAGGTCCTGACCCAGCTGCAGTCGGTACCCGTGGAGGAGCCCTTGGAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS CCA 72 bp | ACACAGGGTTGGCCAGGAGGAAGTTTCCTGGAGCAGTaGACGAGGGAAGTTGCAGCGCAGTCACTCCCACAC | + |
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Preference number: 6 (lower is better) Translates to: TQGWPGGSFLEQ*TREVAAQSLPH Trigger: GTGTGGGAGTGACTGCGCTGCAACTTCCCTCGTCCACTGCTCCAGGAAACTTCCTCCTGGCCAACCCTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS CAA 72 bp | CCTAGGGCCAAGCTATTGATAATGACTGGGCTACCATaGAGGAGCACTGCTGGGGGACTGCTGGCGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: PRAKLLIMTGLP*RSTAGGLLAAR Trigger: CCTGGCCGCCAGCAGTCCCCCAGCAGTGCTCCTCAATGGTAGCCCAGTCATTATCAATAGCTTGGCCCTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS CAA 90 bp | TGCTGCACAGCTACCCCAGTGACAATGGGGCTACCAGACACAGGGTaGGCCAGGAGGAAGTTTCCTGGAGCAGTGGACGAGGGAAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: CCTATPVTMGLPDTG*ARRKFPGAVDEGSC Trigger: GCAACTTCCCTCGTCCACTGCTCCAGGAAACTTCCTCCTGGCCAACCCTGTGTCTGGTAGCCCCATTGTCACTGGGGTAGCTGTGCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS GCA 72 bp | TGCAGCGCAGTCACTCCCACACTAGAGTTTATCAGGTaGACATTGGTAGGCCCCGCTGCAGCTGCCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: CSAVTPTLEFIR*TLVGPAAAATF Trigger: GAAGGTGGCAGCTGCAGCGGGGCCTACCAATGTGCACCTGATAAACTCTAGTGTGGGAGTGACTGCGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS CAA 90 bp | AGTAGCAAGGGCCCCAAGCTGGAGTTCTCTCCTAGGGCCAAGCTATaGATAATGACTGGGCTACCATTGAGGAGCACTGCTGGGGGACTG | + |
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Preference number: 6 (lower is better) Translates to: SSKGPKLEFSPRAKL*IMTGLPLRSTAGGL Trigger: CAGTCCCCCAGCAGTGCTCCTCAATGGTAGCCCAGTCATTATCAATAGCTTGGCCCTAGGAGAGAACTCCAGCTTGGGGCCCTTGCTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS GCA 72 bp | AGGAGGAAGTTTCCTGGAGCAGTGGACGAGGGAAGTTaGAGCGCAGTCACTCCCACACTAGAGTTTATCAGG | + |
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Preference number: 6 (lower is better) Translates to: RRKFPGAVDEGS*SAVTPTLEFIR Trigger: CCTGATAAACTCTAGTGTGGGAGTGACTGCGCTGCAACTTCCCTCGTCCACTGCTCCAGGAAACTTCCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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| CDS CAA 72 bp | CAGGAGGAAGTTTCCTGGAGCAGTGGACGAGGGAAGTaGCAGCGCAGTCACTCCCACACTAGAGTTTATCAG | + |
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Preference number: 6 (lower is better) Translates to: QEEVSWSSGRGK*QRSHSHTRVYQ Trigger: CTGATAAACTCTAGTGTGGGAGTGACTGCGCTGCAACTTCCCTCGTCCACTGCTCCAGGAAACTTCCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049454.6 |
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