Pregenerated sensors for SIX4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034460Ensembl transcript IDs: ENSMUST00000043208.8, ENSMUST00000175693.3
Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGGTGGACTGCTGTTGAGGCGTGGCTCACCTGCTCTTCAGCTGTaGGTACGATCTCACCCAGGGCAGCCTGGGTCATCGGGCCGGACA | + |
|
Preference number: 1 (lower is better) Translates to: PGGLLLRRGSPALQL*VRSHPGQPGSSGRT Trigger: TGTCCGGCCCGATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAGCCACGCCTCAACAGCAGTCCACCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTaGGTCATCGGGCCGGACAATAGGTCTTGCCCCGGAATAAGGGAA | + |
|
Preference number: 1 (lower is better) Translates to: LTCSSAVGTISPRAA*VIGPDNRSCPGIRE Trigger: TTCCCTTATTCCGGGGCAAGACCTATTGTCCGGCCCGATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR GCA 90 bp | TCTCTGACAAAATCCTGGTGGACTGCTGTTGAGGCGTGGCTCACCTaGTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTC | + |
|
Preference number: 1 (lower is better) Translates to: SLTKSWWTAVEAWLT*SSAVGTISPRAAWV Trigger: GACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAGCCACGCCTCAACAGCAGTCCACCAGGATTTTGTCAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 90 bp | AAGCGCTGTTCTCTGACAAAATCCTGGTGGACTGCTGTTGAGGCGTaGCTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: KRCSLTKSWWTAVEA*LTCSSAVGTISPRA Trigger: TGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAGCCACGCCTCAACAGCAGTCCACCAGGATTTTGTCAGAGAACAGCGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 90 bp | GGGACTGACTGCAGAACCAAGCGCTGTTCTCTGACAAAATCCTGGTaGACTGCTGTTGAGGCGTGGCTCACCTGCTCTTCAGCTGTGGGT | + |
|
Preference number: 1 (lower is better) Translates to: GTDCRTKRCSLTKSW*TAVEAWLTCSSAVG Trigger: ACCCACAGCTGAAGAGCAGGTGAGCCACGCCTCAACAGCAGTCCACCAGGATTTTGTCAGAGAACAGCGCTTGGTTCTGCAGTCAGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR TCA 90 bp | CAGAACCAAGCGCTGTTCTCTGACAAAATCCTGGTGGACTGCTGTTaGGGCGTGGCTCACCTGCTCTTCAGCTGTGGGTACGATCTCACC | + |
|
Preference number: 1 (lower is better) Translates to: QNQALFSDKILVDCC*GVAHLLFSCGYDLT Trigger: GGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAGCCACGCCTCAACAGCAGTCCACCAGGATTTTGTCAGAGAACAGCGCTTGGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 90 bp | ACCACTGCACTGGGGGTAAGAGGGCTCAGGAAAAGTTTACCGTGCTaGACTGTGGCTGGCTCACTTGTAAATGTGCTTCCGTCCGAAGTG | + |
|
Preference number: 1 (lower is better) Translates to: TTALGVRGLRKSLPC*TVAGSLVNVLPSEV Trigger: CACTTCGGACGGAAGCACATTTACAAGTGAGCCAGCCACAGTCCAGCACGGTAAACTTTTCCTGAGCCCTCTTACCCCCAGTGCAGTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 90 bp | AAACCGTGGGCGGCGGACACATTAACCAACGACGAGGTCAGAGGATaGAGGCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTGCATTT | + |
|
Preference number: 1 (lower is better) Translates to: KPWAADTLTNDEVRG*RPLPERFSEDRLAF Trigger: AAATGCAAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTCCATCCTCTGACCTCGTCGTTGGTTAATGTGTCCGCCGCCCACGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 90 bp | TTAGGGACTGACTGCAGAACCAAGCGCTGTTCTCTGACAAAATCCTaGTGGACTGCTGTTGAGGCGTGGCTCACCTGCTCTTCAGCTGTG | + |
|
Preference number: 1 (lower is better) Translates to: LGTDCRTKRCSLTKS*WTAVEAWLTCSSAV Trigger: CACAGCTGAAGAGCAGGTGAGCCACGCCTCAACAGCAGTCCACCAGGATTTTGTCAGAGAACAGCGCTTGGTTCTGCAGTCAGTCCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 90 bp | ACAGATGACACAGTACATTTGCTTGCCACAGGTGCAGACACGGGCTaGCTCTCGGCAAGGTCAGGGTTGAGCTCAGTGGGATTAAGTAGT | + |
|
Preference number: 1 (lower is better) Translates to: TDDTVHLLATGADTG*LSARSGLSSVGLSS Trigger: ACTACTTAATCCCACTGAGCTCAACCCTGACCTTGCCGAGAGCCAGCCCGTGTCTGCACCTGTGGCAAGCAAATGTACTGTGTCATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR GCA 90 bp | TATACCACTGCACTGGGGGTAAGAGGGCTCAGGAAAAGTTTACCGTaGTGGACTGTGGCTGGCTCACTTGTAAATGTGCTTCCGTCCGAA | + |
|
Preference number: 1 (lower is better) Translates to: YTTALGVRGLRKSLP*WTVAGSLVNVLPSE Trigger: TTCGGACGGAAGCACATTTACAAGTGAGCCAGCCACAGTCCAGCACGGTAAACTTTTCCTGAGCCCTCTTACCCCCAGTGCAGTGGTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 90 bp | AGCACTTGGAAGCAGAGACAAGCACATCAGAGTTTGAGGCCAGCCTaGTCTGCAGAATCAGGTCTAGGACAGCCAGGGATACCATGTCTT | + |
|
Preference number: 1 (lower is better) Translates to: STWKQRQAHQSLRPA*SAESGLGQPGIPCL Trigger: AAGACATGGTATCCCTGGCTGTCCTAGACCTGATTCTGCAGACCAGGCTGGCCTCAAACTCTGATGTGCTTGTCTCTGCTTCCAAGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 90 bp | ACCAGGCCTCTTTCTAAGCCTTCCTGTTTCACAGCTCCTACAGTCTaGCCTGAATTAGGAACGGTGTATACCACTGCACTGGGGGTAAGA | + |
|
Preference number: 1 (lower is better) Translates to: TRPLSKPSCFTAPTV*PELGTVYTTALGVR Trigger: TCTTACCCCCAGTGCAGTGGTATACACCGTTCCTAATTCAGGCCAGACTGTAGGAGCTGTGAAACAGGAAGGCTTAGAAAGAGGCCTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR TCA 90 bp | AAGGGAACAGTTCTGAAGGGTTGCATAGTTAGTGTTGCTGACAGATaGCACAGTACATTTGCTTGCCACAGGTGCAGACACGGGCTGGCT | + |
|
Preference number: 1 (lower is better) Translates to: KGTVLKGCIVSVADR*HSTFACHRCRHGLA Trigger: AGCCAGCCCGTGTCTGCACCTGTGGCAAGCAAATGTACTGTGTCATCTGTCAGCAACACTAACTATGCAACCCTTCAGAACTGTTCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR GCA 90 bp | AGATCTGTCTGCCTCTGCCTCCCAAGGGCGAGGATGAAAGACATGTaGCACCCACCATGCCTGGCTAGAACAAGATATTTAAGTATAGCT | + |
|
Preference number: 1 (lower is better) Translates to: RSVCLCLPRARMKDM*HPPCLARTRYLSIA Trigger: AGCTATACTTAAATATCTTGTTCTAGCCAGGCATGGTGGGTGGCACATGTCTTTCATCCTCGCCCTTGGGAGGCAGAGGCAGACAGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR GCA 90 bp | GCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTGCATTTACTTGTaGACTGTGATTGACAGGCATCAACTGAGAAAAGACCAGGCCTCT | + |
|
Preference number: 1 (lower is better) Translates to: ATPREIFRRQACIYL*TVIDRHQLRKDQAS Trigger: AGAGGCCTGGTCTTTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR GCA 90 bp | CAGAGGATGGAGGCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTaGATTTACTTGTGCACTGTGATTGACAGGCATCAACTGAGAAAA | + |
|
Preference number: 1 (lower is better) Translates to: QRMEATPREIFRRQA*IYLCTVIDRHQLRK Trigger: TTTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTCCATCCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 90 bp | CCGAGTCTTTACAAGGGGAAGGGAACTGATGGCGGTCGGATGACTTaGGTCCCCAAATATTATCAGAGAGAGAAAGATGAATTTAGGGAG | + |
|
Preference number: 1 (lower is better) Translates to: PSLYKGKGTDGGRMT*VPKYYQREKDEFRE Trigger: CTCCCTAAATTCATCTTTCTCTCTCTGATAATATTTGGGGACCCAAGTCATCCGACCGCCATCAGTTCCCTTCCCCTTGTAAAGACTCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 90 bp | CCAGGTCTTCACAGCCGGCTTCAACCATGCCGTCCAGGACGTACTTaGATTTCGAGTCTAACATCATTAAGTTGTTTGTTGCTTTGTTCT | + |
|
Preference number: 1 (lower is better) Translates to: PGLHSRLQPCRPGRT*ISSLTSLSCLLLCS Trigger: AGAACAAAGCAACAAACAACTTAATGATGTTAGACTCGAAATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR TCA 90 bp | AAGTCCTGCCTTATGCAGGGGTTCTGTGGTAAACTTAACCCTGTTTaGCGGTACAAAAGAACCATCAACACTGCTGTTGACACTTCTGTA | + |
|
Preference number: 1 (lower is better) Translates to: KSCLMQGFCGKLNPV*RYKRTINTAVDTSV Trigger: TACAGAAGTGTCAACAGCAGTGTTGATGGTTCTTTTGTACCGTCAAACAGGGTTAAGTTTACCACAGAACCCCTGCATAAGGCAGGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR GCA 90 bp | ACAAGATCACCATCTCCCACCTCTATGAGGCTCCTCAGCATCCTATaGCCAATTCTAACGGTTCCTATTTCAACACAGAGAAAAATGACA | + |
|
Preference number: 1 (lower is better) Translates to: TRSPSPTSMRLLSIL*PILTVPISTQRKMT Trigger: TGTCATTTTTCTCTGTGTTGAAATAGGAACCGTTAGAATTGGGCATAGGATGCTGAGGAGCCTCATAGAGGTGGGAGATGGTGATCTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR TCA 90 bp | GTTAAACTGATGCCAGAGAGTCAAAGGGTAGGGAGCCCGGTCATTTaGTCTTGGCTATTTTTGTTATTCTTACTCTTGGTAAATATCCCG | + |
|
Preference number: 1 (lower is better) Translates to: VKLMPESQRVGSPVI*SWLFLLFLLLVNIP Trigger: CGGGATATTTACCAAGAGTAAGAATAACAAAAATAGCCAAGATCAAATGACCGGGCTCCCTACCCTTTGACTCTCTGGCATCAGTTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR TCA 90 bp | CAAAATGATGGGCACAGAATTCTTCATAGGGCTCTTAATCTTGACTaGAAGTTCCCTTGTGTAACAACAAATGTTAAGTCCCCAGTGACC | + |
|
Preference number: 1 (lower is better) Translates to: QNDGHRILHRALNLD*KFPCVTTNVKSPVT Trigger: GGTCACTGGGGACTTAACATTTGTTGTTACACAAGGGAACTTTCAGTCAAGATTAAGAGCCCTATGAAGAATTCTGTGCCCATCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR TCA 90 bp | AAATGTAAACTATACTACAAGACCAGGATGCTAATCACATTAATATaGTCAGTAAATAACTGGGAGACGGGGGCAGCCAAGCTGTGTAAG | + |
|
Preference number: 1 (lower is better) Translates to: KCKLYYKTRMLITLI*SVNNWETGAAKLCK Trigger: CTTACACAGCTTGGCTGCCCCCGTCTCCCAGTTATTTACTGATCATATTAATGTGATTAGCATCCTGGTCTTGTAGTATAGTTTACATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR TCA 90 bp | AACCAAACACAACAACAACAACAAAACCCTGACTTTATTGCAGGTTaGCCTTTGGTAAAAATCTGGGCTTTCAAACCTGCTTTCAGGAGA | + |
|
Preference number: 1 (lower is better) Translates to: NQTQQQQQNPDFIAG*PLVKIWAFKPAFRR Trigger: TCTCCTGAAAGCAGGTTTGAAAGCCCAGATTTTTACCAAAGGTCAACCTGCAATAAAGTCAGGGTTTTGTTGTTGTTGTTGTGTTTGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR GCA 90 bp | TTTGCATTCTCCTCTGCTAACATGCATCCATGCTCATACTTTCTGTaGAACTTAGTTGTCTCTAGAATGCTTGGAAACTTTCATAAAGAG | + |
|
Preference number: 1 (lower is better) Translates to: FAFSSANMHPCSYFL*NLVVSRMLGNFHKE Trigger: CTCTTTATGAAAGTTTCCAAGCATTCTAGAGACAACTAAGTTGCACAGAAAGTATGAGCATGGATGCATGTTAGCAGAGGAGAATGCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR TCA 90 bp | ACAAACAAACAACAACCTCTGGCCCAAATTGCATATTTCAGCAATTaGGGGACATTCACCAATTTCACAAAAATGGGATTTAGGTTCTTG | + |
|
Preference number: 1 (lower is better) Translates to: TNKQQPLAQIAYFSN*GTFTNFTKMGFRFL Trigger: CAAGAACCTAAATCCCATTTTTGTGAAATTGGTGAATGTCCCTCAATTGCTGAAATATGCAATTTGGGCCAGAGGTTGTTGTTTGTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCTGCAGAGTCCCAGGCTaGGGACGCAGGCCGACTAAC | + |
|
Preference number: 2 (lower is better) Translates to: LTCSSAVGTISPRAAWVICRVPG*GRRPTN Trigger: GTTAGTCGGCCTGCGTCCTCAGCCTGGGACTCTGCA...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR TCA 90 bp | CTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCGGGCCGGACAATAGGTTCCCAAGGGCGAGGATaGAAGACATGTGCCACCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LWVRSHPGQPGSSGRTIGSQGRG*KTCATH Trigger: GTGGGTGGCACATGTCTTTCATCCTCGCCCTTGGGA...ACCTATTGTCCGGCCCGATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR TCA 90 bp | GTTCCCAGGTCTTCACAGCCGGCTTCAACCATGCCGTCCAGGACGTACTTGGATCTGGTGGACTGCTGTTaGGGCGTGGCTCACCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: VPRSSQPASTMPSRTYLDLVDCC*GVAHLL Trigger: GAGCAGGTGAGCCACGCCTCAACAGCAGTCCACCAG...ATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCACAGTACTCTGTATGTaGGGAAGTTCCCAGGGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LTCSSAVGTISPRAAWVITVLCM*GSSQGH Trigger: GTGGCCCTGGGAACTTCCTCACATACAGAGTACTGT...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR GCA 90 bp | GTTCCCAGGTCTTCACAGCCGGCTTCAACCATGCCGTCCAGGACGTACTTGGATAGATCTGTCTGCCTCTaGCTCCCAAGGGCGAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: VPRSSQPASTMPSRTYLDRSVCL*LPRARM Trigger: CATCCTCGCCCTTGGGAGGCAGAGGCAGACAGATCT...ATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR TCA 90 bp | CTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCGGGCCGGACAATAGGTTTGACAGGCATCAACTaGGAAAAGACCAGGCCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LWVRSHPGQPGSSGRTIGLTGIN*EKTRPL Trigger: AAGAGGCCTGGTCTTTTCTCAGTTGATGCCTGTCAA...ACCTATTGTCCGGCCCGATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR GCA 90 bp | CTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCGGGCCGGACAATAGGTATGTGCCACCCACCATaGCTGGCTAGAACAAGATAT | + |
|
Preference number: 2 (lower is better) Translates to: LWVRSHPGQPGSSGRTIGMCHPP*LARTRY Trigger: ATATCTTGTTCTAGCCAGGCATGGTGGGTGGCACAT...ACCTATTGTCCGGCCCGATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR GCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCCTGGGCTTTCAAACCTaGTTTCAGGAGAGAGGACAA | + |
|
Preference number: 2 (lower is better) Translates to: LTCSSAVGTISPRAAWVILGFQT*FQERGQ Trigger: TTGTCCTCTCTCCTGAAAGCAGGTTTGAAAGCCCAG...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR GCA 90 bp | GTTCCCAGGTCTTCACAGCCGGCTTCAACCATGCCGTCCAGGACGTACTTGGATAGGATGAAAGACATGTaGCACCCACCATGCCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: VPRSSQPASTMPSRTYLDRMKDM*HPPCLA Trigger: AGCCAGGCATGGTGGGTGGCACATGTCTTTCATCCT...ATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR CCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCTACAAACCCACACAGTaGAGACACCAACACACATCC | + |
|
Preference number: 2 (lower is better) Translates to: LTCSSAVGTISPRAAWVIYKPTQ*RHQHTS Trigger: GGATGTGTGTTGGTGTCTCCACTGTGTGGGTTTGTA...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CAA 90 bp | ATGTCTTCATCCAACTGGACGGTTTGGAGCTTGGCCAGCTCTTTTTaGTCCGTTCCCAGGTCTTCACAGCCGGCTTCAACCATGCCGTCC | + |
|
Preference number: 2 (lower is better) Translates to: MSSSNWTVWSLASSF*SVPRSSQPASTMPS Trigger: GGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGGGAACGGACAAAAAAGAGCTGGCCAAGCTCCAAACCGTCCAGTTGGATGAAGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCTCCAGGCCATACACATaGACAAACTGCCCCTATTTT | + |
|
Preference number: 2 (lower is better) Translates to: LTCSSAVGTISPRAAWVISRPYT*TNCPYF Trigger: AAAATAGGGGCAGTTTGTTCATGTGTATGGCCTGGA...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCGGGCCGGACAATAGGTGAGCTTTCTATCTGCTaGGTAAAGATTCAGTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: LWVRSHPGQPGSSGRTIGELSIC*VKIQSL Trigger: CAGTGACTGAATCTTTACCCAGCAGATAGAAAGCTC...ACCTATTGTCCGGCCCGATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR TCA 90 bp | GTTCCCAGGTCTTCACAGCCGGCTTCAACCATGCCGTCCAGGACGTACTTGGATTGCACTGCTGCTGACTaGACTCAGAGCTTTCTATCT | + |
|
Preference number: 2 (lower is better) Translates to: VPRSSQPASTMPSRTYLDCTAAD*TQSFLS Trigger: AGATAGAAAGCTCTGAGTTCAGTCAGCAGCAGTGCA...ATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR GCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCACAGTTCTGAAGGGTTaGATAGTTAGTGTTGCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: LTCSSAVGTISPRAAWVITVLKG*IVSVAD Trigger: GTCAGCAACACTAACTATGCAACCCTTCAGAACTGT...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR CCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCGGGGGAGAATTAATATaGGGTACTTATCTACCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: LTCSSAVGTISPRAAWVIGGELI*GTYLPD Trigger: GTCAGGTAGATAAGTACCCCATATTAATTCTCCCCC...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR TCA 90 bp | GTTCCCAGGTCTTCACAGCCGGCTTCAACCATGCCGTCCAGGACGTACTTGGATCTTGTGCACTGTGATTaGCAGGCATCAACTGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VPRSSQPASTMPSRTYLDLVHCD*QASTEK Trigger: TTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAG...ATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR TCA 90 bp | GTTCCCAGGTCTTCACAGCCGGCTTCAACCATGCCGTCCAGGACGTACTTGGATAGTGTTGCTGACAGATaGCACAGTACATTTGCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: VPRSSQPASTMPSRTYLDSVADR*HSTFAC Trigger: GCAAGCAAATGTACTGTGTCATCTGTCAGCAACACT...ATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR GCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCACAGAACAGAACAAATaGAGGTGCAAAGGACAATTG | + |
|
Preference number: 2 (lower is better) Translates to: LTCSSAVGTISPRAAWVITEQNK*RCKGQL Trigger: CAATTGTCCTTTGCACCTGCATTTGTTCTGTTCTGT...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR GCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCTCAGAGCTTTCTATCTaGTGGGTAAAGATTCAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LTCSSAVGTISPRAAWVISELSI*WVKIQS Trigger: TGACTGAATCTTTACCCAGCAGATAGAAAGCTCTGA...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR GCA 90 bp | GACGAGGTCAGAGGATGGAGGCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTCTACTACAAAGGAGTTaGCTACTGGAACCATCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: DEVRGWRPLPERFSEDRLLLQRS*LLEPSG Trigger: ACCAGATGGTTCCAGTAGGCAACTCCTTTGTAGTAG...AAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTCCATCCTCTGACCTCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR CCA 90 bp | GACGAGGTCAGAGGATGGAGGCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTGTGCAGAAAATTAAGTaGGTCACTCAACGTTGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: DEVRGWRPLPERFSEDRLVQKIK*VTQRCP Trigger: AGGGCAACGTTGAGTGACCCACTTAATTTTCTGCAC...AAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTCCATCCTCTGACCTCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CAA 90 bp | GAGGCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTGCATTTACTaGTGCACTGTGATTGACAGGCATCAACTGAGAAAAGACCAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: EATPREIFRRQACIY*CTVIDRHQLRKDQA Trigger: GGCCTGGTCTTTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR TCA 90 bp | GACGAGGTCAGAGGATGGAGGCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTACAACAACAAAACCCTaGCTTTATTGCAGGTTGACC | + |
|
Preference number: 2 (lower is better) Translates to: DEVRGWRPLPERFSEDRLTTTKP*LYCRLT Trigger: GGTCAACCTGCAATAAAGTCAGGGTTTTGTTGTTGT...AAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTCCATCCTCTGACCTCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CAA 90 bp | CCCAGGTCTTCACAGCCGGCTTCAACCATGCCGTCCAGGACGTACTaGGATTTCGAGTCTAACATCATTAAGTTGTTTGTTGCTTTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: PRSSQPASTMPSRTY*DFESNIIKLFVALF Trigger: GAACAAAGCAACAAACAACTTAATGATGTTAGACTCGAAATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTTTGTCAGATATATGGGAGTTTTCCATCACACGCACGCAGACACCCACACACTCAGTTCACAGAGCCTaGAGGGAGACATACAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LLSDIWEFSITRTQTPTHSVHRA*RETYKV Trigger: TACCTTGTATGTCTCCCTTCAGGCTCTGTGAACTGA...GTGTGTGGGTGTCTGCGTGCGTGTGATGGAAAACTCCCATATATCTGACAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTTTGTCAGATATATGGGAGTTTTCCATCACACGCACGCAGACACCCACACACGGATGTGATGAGAAGTaGCAAAGTTCCAGTACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: LLSDIWEFSITRTQTPTHGCDEK*QSSSTG Trigger: CCCAGTACTGGAACTTTGTCACTTCTCATCACATCC...GTGTGTGGGTGTCTGCGTGCGTGTGATGGAAAACTCCCATATATCTGACAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCTTGCATTTACTTGTGCACTGTGATTGACAGGCATCAACTGAGAAAAGACACATTCCTGAGGAACTaGTGTGCCAGCCTCAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: QACIYLCTVIDRHQLRKDTFLRN*CASLRL Trigger: AAGCCTGAGGCTGGCACATCAGTTCCTCAGGAATGT...GTCTTTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR TCA 90 bp | AGGGAGCTTTCTGGGGGAGAATTAATATGGGGTACTTATCTACCTGACTCTTCAGTGACCAGGCTGATCTaGAACACACAGAGATCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: RELSGGELIWGTYLPDSSVTRLI*NTQRSV Trigger: GACAGATCTCTGTGTGTTTCAGATCAGCCTGGTCAC...TGAAGAGTCAGGTAGATAAGTACCCCATATTAATTCTCCCCCAGAAAGCTCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR GCA 90 bp | CTGATTCCTCATCAGGAATCACTAGAGGATCCTTTGCAGCATCTTCAAGCATTGGTGAAACGGAAGTCCTaGCTTATGCAGGGGTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LIPHQESLEDPLQHLQALVKRKS*LMQGFC Trigger: ACAGAACCCCTGCATAAGGCAGGACTTCCGTTTCAC...CAATGCTTGAAGATGCTGCAAAGGATCCTCTAGTGATTCCTGATGAGGAATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGATTCCTCATCAGGAATCACTAGAGGATCCTTTGCAGCATCTTCAAGCATTGTTGAATCCCGGTACTTaGAAGGCAGAGGCAGGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LIPHQESLEDPLQHLQALLNPGT*KAEAGE Trigger: TTCACCTGCCTCTGCCTTCCAAGTACCGGGATTCAA...CAATGCTTGAAGATGCTGCAAAGGATCCTCTAGTGATTCCTGATGAGGAATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTAGTCTGCCATACACGCCCAAGAATTCCAGCTTTAACATGCAGAATAACAAGAGCCAGCAGCAGGGGTaGGATTTAAAGGGGGTTATT | + |
|
Preference number: 2 (lower is better) Translates to: GSLPYTPKNSSFNMQNNKSQQQG*DLKGVI Trigger: AATAACCCCCTTTAAATCCCACCCCTGCTGCTGGCT...CTTGTTATTCTGCATGTTAAAGCTGGAATTCTTGGGCGTGTATGGCAGACTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR CAA 90 bp | CCTCATCAGGAATCACTAGAGGATCCTTTGCAGCATCTTCAAGCATaGGTTTATGTAAGAAGGATATTCTGCCACGTGAACTCCAAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: PHQESLEDPLQHLQA*VYVRRIFCHVNSKG Trigger: GCCCTTGGAGTTCACGTGGCAGAATATCCTTCTTACATAAACCAATGCTTGAAGATGCTGCAAAGGATCCTCTAGTGATTCCTGATGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGATGGCGGTCGGATGACTTGGGTCCCCAAATATTATCAGAGAGAGAAAGATGGGAGCCCGGTCATTTaGTCTTGGCTATTTTTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: TDGGRMTWVPKYYQREKDGSPVI*SWLFLL Trigger: TAACAAAAATAGCCAAGATCAAATGACCGGGCTCCC...ATCTTTCTCTCTCTGATAATATTTGGGGACCCAAGTCATCCGACCGCCATCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCTTGCATTTACTTGTGCACTGTGATTGACAGGCATCAACTGAGAAAAGACTTTTTGCACTGCTGCTaGCTGAACTCAGAGCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: QACIYLCTVIDRHQLRKDFLHCC*LNSELS Trigger: AGAAAGCTCTGAGTTCAGTCAGCAGCAGTGCAAAAA...GTCTTTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR CCA 90 bp | ACTGATGGCGGTCGGATGACTTGGGTCCCCAAATATTATCAGAGAGAGAAAGATTTTAATCCCAGCACTTaGAAGCAGAGACAAGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: TDGGRMTWVPKYYQREKDFNPST*KQRQAH Trigger: ATGTGCTTGTCTCTGCTTCCAAGTGCTGGGATTAAA...ATCTTTCTCTCTCTGATAATATTTGGGGACCCAAGTCATCCGACCGCCATCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CAA 90 bp | ACGGTTCCTATTTCAACACAGAGAAAAATGACAAGTGATACAGATTaGACTCACATTCCTGAGGAACTGATGTGCCAGCCTCAGGCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: TVPISTQRKMTSDTD*THIPEELMCQPQAY Trigger: GTAAGCCTGAGGCTGGCACATCAGTTCCTCAGGAATGTGAGTCAAATCTGTATCACTTGTCATTTTTCTCTGTGTTGAAATAGGAACCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR TCA 90 bp | GGTAGTCTGCCATACACGCCCAAGAATTCCAGCTTTAACATGCAGAATAACAAGGTGGAGTTATACTGCTaGCTAAATGATAGACGATGG | + |
|
Preference number: 2 (lower is better) Translates to: GSLPYTPKNSSFNMQNNKVELYC*LNDRRW Trigger: CCATCGTCTATCATTTAGTCAGCAGTATAACTCCAC...CTTGTTATTCTGCATGTTAAAGCTGGAATTCTTGGGCGTGTATGGCAGACTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTAGTCTGCCATACACGCCCAAGAATTCCAGCTTTAACATGCAGAATAACAAGCCTTATAGAACGTTTTaGCTTTCCCACTTCCCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: GSLPYTPKNSSFNMQNNKPYRTF*LSHFPY Trigger: GTAAGGGAAGTGGGAAAGTCAAAACGTTCTATAAGG...CTTGTTATTCTGCATGTTAAAGCTGGAATTCTTGGGCGTGTATGGCAGACTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCTTGCATTTACTTGTGCACTGTGATTGACAGGCATCAACTGAGAAAAGACAATGCCTCTAATAGTTaGAGTAGACCATGGCTACAG | + |
|
Preference number: 2 (lower is better) Translates to: QACIYLCTVIDRHQLRKDNASNS*SRPWLQ Trigger: CTGTAGCCATGGTCTACTTCAACTATTAGAGGCATT...GTCTTTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR GCA 90 bp | GGTAGTCTGCCATACACGCCCAAGAATTCCAGCTTTAACATGCAGAATAACAAGATCTGTCTATCCATGTaGATGGCAAACCTTCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: GSLPYTPKNSSFNMQNNKICLSM*MANLPH Trigger: ATGTGGAAGGTTTGCCATGCACATGGATAGACAGAT...CTTGTTATTCTGCATGTTAAAGCTGGAATTCTTGGGCGTGTATGGCAGACTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGATTCCTCATCAGGAATCACTAGAGGATCCTTTGCAGCATCTTCAAGCATTGTTCATAGTCATAGCCTaGAGAACTGCTGTTTCATGG | + |
|
Preference number: 2 (lower is better) Translates to: LIPHQESLEDPLQHLQALFIVIA*RTAVSW Trigger: CCATGAAACAGCAGTTCTGCAGGCTATGACTATGAA...CAATGCTTGAAGATGCTGCAAAGGATCCTCTAGTGATTCCTGATGAGGAATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGATGGCGGTCGGATGACTTGGGTCCCCAAATATTATCAGAGAGAGAAAGATCCTTTGGTAAAAATCTaGGCTTTCAAACCTGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: TDGGRMTWVPKYYQREKDPLVKI*AFKPAF Trigger: GAAAGCAGGTTTGAAAGCCCAGATTTTTACCAAAGG...ATCTTTCTCTCTCTGATAATATTTGGGGACCCAAGTCATCCGACCGCCATCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR TCA 90 bp | GGTAGTCTGCCATACACGCCCAAGAATTCCAGCTTTAACATGCAGAATAACAAGGTGTTTTCCTCTAAATaGATAGAAGCTCTCCATCCT | + |
|
Preference number: 2 (lower is better) Translates to: GSLPYTPKNSSFNMQNNKVFSSK*IEALHP Trigger: AGGATGGAGAGCTTCTATTCATTTAGAGGAAAACAC...CTTGTTATTCTGCATGTTAAAGCTGGAATTCTTGGGCGTGTATGGCAGACTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGATGGCGGTCGGATGACTTGGGTCCCCAAATATTATCAGAGAGAGAAAGATATCCCGATTGTAAAATaGAAAAAGATATCAGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: TDGGRMTWVPKYYQREKDIPIVK*KKISAG Trigger: GCCTGCTGATATCTTTTTTCATTTTACAATCGGGAT...ATCTTTCTCTCTCTGATAATATTTGGGGACCCAAGTCATCCGACCGCCATCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCTTGCATTTACTTGTGCACTGTGATTGACAGGCATCAACTGAGAAAAGACCTCTACCAGTTAGGATaGGAGAAAGTGCAAAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: QACIYLCTVIDRHQLRKDLYQLG*EKVQNK Trigger: TTTGTTTTGCACTTTCTCTCATCCTAACTGGTAGAG...GTCTTTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR GCA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATACCAGATGCGCTTGCTTaGAGAAGTACAGTGTTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: VSYILCRVSLQVRHSKTIPDALA*RSTVFS Trigger: GGAAAACACTGTACTTCTGCAAGCAAGCGCATCTGG...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTAAACTTAACCCTGTTTGACGGTACAAAAGAACCATCAACACTGCTGTTGACAAAGTTCCAGTACTaGGGGTTAACAGTTCCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: VVNLTLFDGTKEPSTLLLTKFQY*GLTVPV Trigger: AACAGGAACTGTTAACCCCCAGTACTGGAACTTTGT...CAACAGCAGTGTTGATGGTTCTTTTGTACCGTCAAACAGGGTTAAGTTTACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTAGTCTGCCATACACGCCCAAGAATTCCAGCTTTAACATGCAGAATAACAAGTCAAAACACTGGAAATaGGCTTCAGTTGAACAGATT | + |
|
Preference number: 2 (lower is better) Translates to: GSLPYTPKNSSFNMQNNKSKHWK*ASVEQI Trigger: AATCTGTTCAACTGAAGCTCATTTCCAGTGTTTTGA...CTTGTTATTCTGCATGTTAAAGCTGGAATTCTTGGGCGTGTATGGCAGACTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATAGACGTAACTAAGAGCTaGGTGCCAATTCTGGCTATA | + |
|
Preference number: 2 (lower is better) Translates to: VSYILCRVSLQVRHSKTIDVTKS*VPILAI Trigger: TATAGCCAGAATTGGCACTCAGCTCTTAGTTACGTC...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGCTTGCATTTACTTGTGCACTGTGATTGACAGGCATCAACTGAGAAAAGACCAACTCCTTTACAAGTaGAGAAAATTAAGTGGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: QACIYLCTVIDRHQLRKDQLLYK*RKLSGS Trigger: TGACCCACTTAATTTTCTGCACTTGTAAAGGAGTTG...GTCTTTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR TCA 90 bp | TGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACATTTGTGCTTAGCAACTaGGAAGTCACCTTAGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: CNSVQGDHGVYHIPFTHTFVLSN*EVTLEK Trigger: TTTTTCTAAGGTGACTTCTCAGTTGCTAAGCACAAA...TGTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATATCTGTCAAAAACACTTaGGAAAAGAGGACTCGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: VSYILCRVSLQVRHSKTISVKNT*EKRTRV Trigger: AACTCGAGTCCTCTTTTCTCAAGTGTTTTTGACAGA...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATATTACTCTGCCACGTTTaGCTATTAGCAATCACATTT | + |
|
Preference number: 2 (lower is better) Translates to: VSYILCRVSLQVRHSKTILLCHV*LLAITF Trigger: AAATGTGATTGCTAATAGTCAAACGTGGCAGAGTAA...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGAAGGGAGACATACAAGGTATAAATAAAAACTCACTGTACTTACTCAGATCTTCGCTTCCAAGAGCCTaGAGCTATTATTTAATCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LKGDIQGINKNSLYLLRSSLPRA*SYYLIS Trigger: GGAGATTAAATAATAGCTCCAGGCTCTTGGAAGCGA...AGATCTGAGTAAGTACAGTGAGTTTTTATTTATACCTTGTATGTCTCCCTTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATATACTTACTCAGATCTTaGTTAGAGACCTGTATTTAC | + |
|
Preference number: 2 (lower is better) Translates to: VSYILCRVSLQVRHSKTIYLLRS*LETCIY Trigger: GTAAATACAGGTCTCTAAGCAAGATCTGAGTAAGTA...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATAGAGTTAAGGTCAGTGTaGAATTCAACTATGGATTTA | + |
|
Preference number: 2 (lower is better) Translates to: VSYILCRVSLQVRHSKTIELRSV*NSTMDL Trigger: TAAATCCATAGTTGAATTGCACACTGACCTTAACTC...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR CAA 90 bp | AAACAAGAACATCCAAAACAAACAAACAACAACCTCTGGCCCAAATaGCATATTTCAGCAATTGAGGGACATTCACCAATTTCACAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KQEHPKQTNNNLWPK*HISAIEGHSPISQK Trigger: TTTTTGTGAAATTGGTGAATGTCCCTCAATTGCTGAAATATGCAATTTGGGCCAGAGGTTGTTGTTTGTTTGTTTTGGATGTTCTTGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR CCA 72 bp | ACAGTACATTTGCTTGCCACAGGTGCAGACACGGGCTaGCTCTCGGCAAGGTCAGGGTTGAGCTCAGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TVHLLATGADTG*LSARSGLSSVG Trigger: TCCCACTGAGCTCAACCCTGACCTTGCCGAGAGCCAGCCCGTGTCTGCACCTGTGGCAAGCAAATGTACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR TCA 72 bp | GCGCTGTTCTCTGACAAAATCCTGGTGGACTGCTGTTaGGGCGTGGCTCACCTGCTCTTCAGCTGTGGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: ALFSDKILVDCC*GVAHLLFSCGY Trigger: GTACCCACAGCTGAAGAGCAGGTGAGCCACGCCTCAACAGCAGTCCACCAGGATTTTGTCAGAGAACAGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCGGGCCGGACAATAGGTCTTTCTCTGGGGTGTTaGCCTTTTGTCCTAAATTGG | + |
|
Preference number: 3 (lower is better) Translates to: LWVRSHPGQPGSSGRTIGLSLGC*PFVLNW Trigger: CCAATTTAGGACAAAAGGCAAACACCCCAGAGAAAG...ACCTATTGTCCGGCCCGATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCGTGGGTCACTCAACGTaGCCCTTCTTGAATTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LTCSSAVGTISPRAAWVIVGHST*PFLNLC Trigger: ACACAAATTCAAGAAGGGCAACGTTGAGTGACCCAC...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR TCA 72 bp | GCCTGTCGTGGAACTCACTCTGTGACCAGGCTGATCTaGAACACACAGAGATCTGTCTGCCTCTGCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ACRGTHSVTRLI*NTQRSVCLCLP Trigger: TGGGAGGCAGAGGCAGACAGATCTCTGTGTGTTTCAGATCAGCCTGGTCACAGAGTGAGTTCCACGACAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 72 bp | GACTGCAGAACCAAGCGCTGTTCTCTGACAAAATCCTaGTGGACTGCTGTTGAGGCGTGGCTCACCTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: DCRTKRCSLTKS*WTAVEAWLTCS Trigger: AGAGCAGGTGAGCCACGCCTCAACAGCAGTCCACCAGGATTTTGTCAGAGAACAGCGCTTGGTTCTGCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR GCA 72 bp | TGTCCGTTCCCAGGTCTTCACAGCCGGCTTCAACCATaGCGTCCAGGACGTACTTGGATTTCGAGTCTAACA | + |
|
Preference number: 3 (lower is better) Translates to: CPFPGLHSRLQP*RPGRTWISSLT Trigger: TGTTAGACTCGAAATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGGGAACGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 72 bp | GCAGGCCTAGGGAGAGGATCACCGAGGTGCAGGCCTTaGGTTCACGCCTCAGCATCACCAAAAATTAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: AGLGRGSPRCRP*VHASASPKIKT Trigger: TGTTTTAATTTTTGGTGATGCTGAGGCGTGAACCCAAGGCCTGCACCTCGGTGATCCTCTCCCTAGGCCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 72 bp | TCTCTGACAAAATCCTGGTGGACTGCTGTTGAGGCGTaGCTCACCTGCTCTTCAGCTGTGGGTACGATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SLTKSWWTAVEA*LTCSSAVGTIS Trigger: TGAGATCGTACCCACAGCTGAAGAGCAGGTGAGCCACGCCTCAACAGCAGTCCACCAGGATTTTGTCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCCAGGTCTTCACAGCCGGCTTCAACCATGCCGTCCAGGACGTACTTGGATACTACTACAAAGGAGTaGCCTACTGGAACCATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VPRSSQPASTMPSRTYLDTTTKE*PTGTIW Trigger: CCAGATGGTTCCAGTAGGCAACTCCTTTGTAGTAGT...ATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCAAAGAGGTGCATCTTTaGAGACCCCACTTTAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: LTCSSAVGTISPRAAWVIKEVHL*RPHFNG Trigger: ACCATTAAAGTGGGGTCTCAAAAGATGCACCTCTTT...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR GCA 72 bp | GCACTGGGGGTAAGAGGGCTCAGGAAAAGTTTACCGTaGTGGACTGTGGCTGGCTCACTTGTAAATGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: ALGVRGLRKSLP*WTVAGSLVNVL Trigger: AAGCACATTTACAAGTGAGCCAGCCACAGTCCAGCACGGTAAACTTTTCCTGAGCCCTCTTACCCCCAGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 72 bp | AAGCAGAGACAAGCACATCAGAGTTTGAGGCCAGCCTaGTCTGCAGAATCAGGTCTAGGACAGCCAGGGATA | + |
|
Preference number: 3 (lower is better) Translates to: KQRQAHQSLRPA*SAESGLGQPGI Trigger: TATCCCTGGCTGTCCTAGACCTGATTCTGCAGACCAGGCTGGCCTCAAACTCTGATGTGCTTGTCTCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 72 bp | AGGGCTCAGGAAAAGTTTACCGTGCTGGACTGTGGCTaGCTCACTTGTAAATGTGCTTCCGTCCGAAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RAQEKFTVLDCG*LTCKCASVRSA Trigger: AGCACTTCGGACGGAAGCACATTTACAAGTGAGCCAGCCACAGTCCAGCACGGTAAACTTTTCCTGAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTGATGGCGGTCGGATGACTTGGGTCCCCAAATATTATCAGAGAGAGAAAGATCAAGCACATCAGAGTTaGAGGCCAGCCTGGTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TDGGRMTWVPKYYQREKDQAHQS*RPAWSA Trigger: TGCAGACCAGGCTGGCCTCAAACTCTGATGTGCTTG...ATCTTTCTCTCTCTGATAATATTTGGGGACCCAAGTCATCCGACCGCCATCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCCAGGTCTTCACAGCCGGCTTCAACCATGCCGTCCAGGACGTACTTGGATGTGATAGCACTTTTCTaGATTACAGATGAGAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: VPRSSQPASTMPSRTYLDVIALF*ITDEKH Trigger: ATGCTTCTCATCTGTAATCAAGAAAAGTGCTATCAC...ATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR CAA 90 bp | GACGAGGTCAGAGGATGGAGGCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTAGGTGCAAAGGACAATaGTACAATGATGCTAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: DEVRGWRPLPERFSEDRLRCKGQ*YNDAKG Trigger: TCCTTTAGCATCATTGTACAATTGTCCTTTGCACCT...AAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTCCATCCTCTGACCTCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR TCA 72 bp | GTCTTTACAAGGGGAAGGGAACTGATGGCGGTCGGATaGCTTGGGTCCCCAAATATTATCAGAGAGAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VFTRGRELMAVG*LGSPNIIRERK Trigger: CTTTCTCTCTCTGATAATATTTGGGGACCCAAGTCATCCGACCGCCATCAGTTCCCTTCCCCTTGTAAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR GCA 72 bp | CCATCTCCCACCTCTATGAGGCTCCTCAGCATCCTATaGCCAATTCTAACGGTTCCTATTTCAACACAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PSPTSMRLLSIL*PILTVPISTQR Trigger: TCTCTGTGTTGAAATAGGAACCGTTAGAATTGGGCATAGGATGCTGAGGAGCCTCATAGAGGTGGGAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR GCA 72 bp | GAGGCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTaGATTTACTTGTGCACTGTGATTGACAGGCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: EATPREIFRRQA*IYLCTVIDRHQ Trigger: TTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR TCA 72 bp | GCAGACACCCACACACACCCGCCTTATAGAACGTTTTaGCTTTCCCACTTCCCTTACCAGACAGGTATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: ADTHTHPPYRTF*LSHFPYQTGIL Trigger: TAAAATACCTGTCTGGTAAGGGAAGTGGGAAAGTCAAAACGTTCTATAAGGCGGGTGTGTGTGGGTGTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR TCA 72 bp | CCGAAGACAGGCTTGCATTTACTTGTGCACTGTGATTaGCAGGCATCAACTGAGAAAAGACCAGGCCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PKTGLHLLVHCD*QASTEKRPGLF Trigger: AAAGAGGCCTGGTCTTTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTGTCTTCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR TCA 72 bp | GTTCTGAAGGGTTGCATAGTTAGTGTTGCTGACAGATaGCACAGTACATTTGCTTGCCACAGGTGCAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: VLKGCIVSVADR*HSTFACHRCRH Trigger: GTGTCTGCACCTGTGGCAAGCAAATGTACTGTGTCATCTGTCAGCAACACTAACTATGCAACCCTTCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 72 bp | TACAAGGGGAAGGGAACTGATGGCGGTCGGATGACTTaGGTCCCCAAATATTATCAGAGAGAGAAAGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: YKGKGTDGGRMT*VPKYYQREKDE Trigger: TTCATCTTTCTCTCTCTGATAATATTTGGGGACCCAAGTCATCCGACCGCCATCAGTTCCCTTCCCCTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CCA 72 bp | CACAGCCGGCTTCAACCATGCCGTCCAGGACGTACTTaGATTTCGAGTCTAACATCATTAAGTTGTTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: HSRLQPCRPGRT*ISSLTSLSCLL Trigger: CAACAAACAACTTAATGATGTTAGACTCGAAATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTAAACTTAACCCTGTTTGACGGTACAAAAGAACCATCAACACTGCTGTTGGCCAGATGCGCTTGCTaGCAGAAGTACAGTGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VVNLTLFDGTKEPSTLLLARCAC*QKYSVF Trigger: GAAAACACTGTACTTCTGCAAGCAAGCGCATCTGGC...CAACAGCAGTGTTGATGGTTCTTTTGTACCGTCAAACAGGGTTAAGTTTACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR TCA 72 bp | AAGAGGACTCGAGTTTATGCACTAATGTTCACATATTaGGGATGTAGCAGGGTAGTCTGCCATACACGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KRTRVYALMFTY*GCSRVVCHTRP Trigger: TGGGCGTGTATGGCAGACTACCCTGCTACATCCTCAATATGTGAACATTAGTGCATAAACTCGAGTCCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR GCA 72 bp | GATACAGATTTGACTCACATTCCTGAGGAACTGATGTaGCAGCCTCAGGCTTACTTCCTTTCTCTAACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: DTDLTHIPEELM*QPQAYFLSLTD Trigger: GTCTGTTAGAGAAAGGAAGTAAGCCTGAGGCTGGCACATCAGTTCCTCAGGAATGTGAGTCAAATCTGTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR GCA 72 bp | AGGTTGACCTTTGGTAAAAATCTGGGCTTTCAAACCTaGTTTCAGGAGAGAGGACAAGATCACCATCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RLTFGKNLGFQT*FQERGQDHHLP Trigger: TGGGAGATGGTGATCTTGTCCTCTCTCCTGAAAGCAGGTTTGAAAGCCCAGATTTTTACCAAAGGTCAACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAGCTTTCTGGGGGAGAATTAATATGGGGTACTTATCTACCTGACTCTTCAAGGGAGCCCGGTCATTaGATCTTGGCTATTTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: RELSGGELIWGTYLPDSSREPGH*ILAIFV Trigger: AACAAAAATAGCCAAGATCAAATGACCGGGCTCCCT...TGAAGAGTCAGGTAGATAAGTACCCCATATTAATTCTCCCCCAGAAAGCTCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR TCA 72 bp | CTTATGCAGGGGTTCTGTGGTAAACTTAACCCTGTTTaGCGGTACAAAAGAACCATCAACACTGCTGTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LMQGFCGKLNPV*RYKRTINTAVD Trigger: GTCAACAGCAGTGTTGATGGTTCTTTTGTACCGTCAAACAGGGTTAAGTTTACCACAGAACCCCTGCATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR CAA 90 bp | GCATCGACTATATCTGTCTATCCATGTGCATGGCAAACCTTCCACATGATATTTCCATCAACACTGCTGTaGACACTTCTGTACCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: ASTISVYPCAWQTFHMIFPSTLL*TLLYLT Trigger: AGTCAGGTACAGAAGTGTCAACAGCAGTGTTGATGG...AAATATCATGTGGAAGGTTTGCCATGCACATGGATAGACAGATATAGTCGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAGCTTTCTGGGGGAGAATTAATATGGGGTACTTATCTACCTGACTCTTCACAGATGAGAAGCATTTaGCATTCTCCTCTGCTAACA | + |
|
Preference number: 3 (lower is better) Translates to: RELSGGELIWGTYLPDSSQMRSI*HSPLLT Trigger: TGTTAGCAGAGGAGAATGCAAAATGCTTCTCATCTG...TGAAGAGTCAGGTAGATAAGTACCCCATATTAATTCTCCCCCAGAAAGCTCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCTTGCATTTACTTGTGCACTGTGATTGACAGGCATCAACTGAGAAAAGACGGTTTGGTACATTTTTaGGAGATGGACTCTCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: QACIYLCTVIDRHQLRKDGLVHF*EMDSHH Trigger: ATGGTGAGAGTCCATCTCCAAAAAATGTACCAAACC...GTCTTTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR TCA 72 bp | TATCTGTCTATCCATGTGCATGGCAAACCTTCCACATaGTATTTAGTGAAACGGAAGTCCTGCCTTATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: YLSIHVHGKPST*YLVKRKSCLMQ Trigger: CTGCATAAGGCAGGACTTCCGTTTCACTAAATATCATGTGGAAGGTTTGCCATGCACATGGATAGACAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR TCA 72 bp | ATGCCAGAGAGTCAAAGGGTAGGGAGCCCGGTCATTTaGTCTTGGCTATTTTTGTTATTCTTACTCTTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: MPESQRVGSPVI*SWLFLLFLLLV Trigger: TACCAAGAGTAAGAATAACAAAAATAGCCAAGATCAAATGACCGGGCTCCCTACCCTTTGACTCTCTGGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR GCA 72 bp | AGAGAGATTTTCCGAAGACAGGCTTGCATTTACTTGTaGACTGTGATTGACAGGCATCAACTGAGAAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: REIFRRQACIYL*TVIDRHQLRKD Trigger: GTCTTTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTGTCTTCGGAAAATCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR TCA 72 bp | AAACCAAGGAGTGGTACTATCTTTGTGCTTAGCAACTaGGAAGTCACCTTAGAAAAAGTCGCCTTCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KPRSGTIFVLSN*EVTLEKVAFFL Trigger: CAGAAAGAAGGCGACTTTTTCTAAGGTGACTTCTCAGTTGCTAAGCACAAAGATAGTACCACTCCTTGGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR CCA 72 bp | GATCACGGGGTTTACCATATTCCATTCACACATACATaGGCTGCATATCAACTGGCCCTTATTTTACTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: DHGVYHIPFTHT*AAYQLALILLK Trigger: TTTCAGTAAAATAAGGGCCAGTTGATATGCAGCCCATGTATGTGTGAATGGAATATGGTAAACCCCGTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR GCA 72 bp | CGGGGTTTACCATATTCCATTCACACATACATGGGCTaGATATCAACTGGCCCTTATTTTACTGAAAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: RGLPYSIHTYMG*ISTGPYFTERI Trigger: TATTCTTTCAGTAAAATAAGGGCCAGTTGATATGCAGCCCATGTATGTGTGAATGGAATATGGTAAACCCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR TCA 72 bp | AACACATCACGGCTGTTCTGTAACTGTGTAAACCAATaGTGTATCTGGACAATAACACGGATCTATAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: NTSRLFCNCVNQ*CIWTITRIYSF Trigger: AAAGCTATAGATCCGTGTTATTGTCCAGATACATCATTGGTTTACACAGTTACAGAACAGCCGTGATGTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR TCA 72 bp | TCTAGATACATTTTGTATTTCTTTTTGCACTGCTGCTaGCTGAACTCAGAGCTTTCTATCTGCTGGGTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SRYILYFFLHCC*LNSELSICWVK Trigger: CTTTACCCAGCAGATAGAAAGCTCTGAGTTCAGTCAGCAGCAGTGCAAAAAGAAATACAAAATGTATCTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATAGTACTTACTCAGATCTaGCTTAGAGACCTGTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: VSYILCRVSLQVRHSKTIVLTQI*LRDLYL Trigger: TAAATACAGGTCTCTAAGCAAGATCTGAGTAAGTAC...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATATGCATATTTCAGCAATaGAGGGACATTCACCAATTT | + |
|
Preference number: 3 (lower is better) Translates to: VSYILCRVSLQVRHSKTICIFQQ*RDIHQF Trigger: AAATTGGTGAATGTCCCTCAATTGCTGAAATATGCA...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR CCA 72 bp | AAACAAGAACATCCAAAACAAACAAACAACAACCTCTaGCCCAAATTGCATATTTCAGCAATTGAGGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: KQEHPKQTNNNL*PKLHISAIEGH Trigger: ATGTCCCTCAATTGCTGAAATATGCAATTTGGGCCAGAGGTTGTTGTTTGTTTGTTTTGGATGTTCTTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR TCA 72 bp | CAGTCATGTATACCGACCAATTCAAAACACTGGAAATaGGCTTCAGTTGAACAGATTTTTAGTACAATTTAC | + |
|
Preference number: 3 (lower is better) Translates to: QSCIPTNSKHWK*ASVEQIFSTIY Trigger: GTAAATTGTACTAAAAATCTGTTCAACTGAAGCTCATTTCCAGTGTTTTGAATTGGTCGGTATACATGACTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR GCA 72 bp | GGTATAAATAAAAACTCACTGTACTTACTCAGATCTTaGTTAGAGACCTGTATTTACATTCGTACCCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GINKNSLYLLRS*LETCIYIRTQV Trigger: AACTTGGGTACGAATGTAAATACAGGTCTCTAAGCAAGATCTGAGTAAGTACAGTGAGTTTTTATTTATACC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCGCGGCGGCTGCGTGCTaGTGCCTGCCCAGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTCSSAVGTISPRAAWVIAAAAC*CLPRSS Trigger: GGAACTTCTGGGCAGGCACCAGCACGCAGCCGCCGC...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CCA 90 bp | CTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCGGGCCGGACAATAGGTGCAGCAGCGGATGGTTaGCCGACTCGAAGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LWVRSHPGQPGSSGRTIGAAADG*PTRSCG Trigger: GCCACAGCTTCGAGTCGGCCAACCATCCGCTGCTGC...ACCTATTGTCCGGCCCGATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | GTTCCCAGGTCTTCACAGCCGGCTTCAACCATGCCGTCCAGGACGTACTTGGATGCGGCTGCGTGCTGGTaGCTGCCCAGAAGTTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPRSSQPASTMPSRTYLDAAACW*LPRSSE Trigger: CTCGGAACTTCTGGGCAGGCACCAGCACGCAGCCGC...ATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGGGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | CTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCGGGCCGGACAATAGGTGCCTTGTACCAGAGCTaGTGCAGCAGCGGATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWVRSHPGQPGSSGRTIGALYQS*CSSGWL Trigger: CAACCATCCGCTGCTGCAGCAGCTCTGGTACAAGGC...ACCTATTGTCCGGCCCGATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR TCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCTATCAGCCCTGGGAATaGCACAGGGGCACTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTCSSAVGTISPRAAWVIYQPWE*HRGTRA Trigger: AGCCCTAGTGCCCCTGTGTCATTCCCAGGGCTGATA...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR TCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCTCCCATTCTCCTGCTTaGTGTCCGCCGCACTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTCSSAVGTISPRAAWVISHSPA*CPPHLQ Trigger: TTGCAAGTGCGGCGGACATCAAGCAGGAGAATGGGA...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCGCAAGGGGAATTTCCTaGGCAGCCGGTACTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTCSSAVGTISPRAAWVIARGIS*AAGTCP Trigger: TGGACAAGTACCGGCTGCGCAGGAAATTCCCCTTGC...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | GACGAGGTCAGAGGATGGAGGCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTCTGCGTGCTGGTGCCTaGCCAGAAGTTCCGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DEVRGWRPLPERFSEDRLLRAGA*PEVPSG Trigger: TCCACTCGGAACTTCTGGGCAGGCACCAGCACGCAG...AAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTCCATCCTCTGACCTCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | CTTTTGTCAGATATATGGGAGTTTTCCATCACACGCACGCAGACACCCACACACTGCGCGGCGGCTGCGTaGTGGTGCCTGCCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSDIWEFSITRTQTPTHCAAAA*WCLPRS Trigger: ACTTCTGGGCAGGCACCAGCACGCAGCCGCCGCGCA...GTGTGTGGGTGTCTGCGTGCGTGTGATGGAAAACTCCCATATATCTGACAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCCAGGTCTTCACAGCCGGCTTCAACCATGCCGTCCAGGACGTACTTGGATTCCATCCCATTCTCCTaGTTGATGTCCGCCGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: VPRSSQPASTMPSRTYLDSIPFS*LMSAAL Trigger: AAGTGCGGCGGACATCAAGCAGGAGAATGGGATGGA...ATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | GTAGAGTTGGCAAGGTCTGCTAGAAACGGTACTTTTCCATTCTGTTTGGGGGAATGCGCGGCGGCTGCGTaGTGGTGCCTGCCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VELARSARNGTFPFCLGECAAAA*WCLPRS Trigger: ACTTCTGGGCAGGCACCAGCACGCAGCCGCCGCGCA...TTCCCCCAAACAGAATGGAAAAGTACCGTTTCTAGCAGACCTTGCCAACTCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CCA 90 bp | GACGAGGTCAGAGGATGGAGGCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTGATTCGCTTTTGGACTaGGTCTCGGAGGGGTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: DEVRGWRPLPERFSEDRLDSLLD*VSEGFR Trigger: CCGAAACCCCTCCGAGACCCAGTCCAAAAGCGAATC...AAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTCCATCCTCTGACCTCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CAA 72 bp | TGGTTGTTGTCAAGCTGGGTAGTGGTGGCCCATGCCTaGAATCCCGGTACTTGGAAGGCAGAGGCAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WLLSSWVVVAHA*NPGTWKAEAGE Trigger: TTCACCTGCCTCTGCCTTCCAAGTACCGGGATTCAAGGCATGGGCCACCACTACCCAGCTTGACAACAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR CAA 72 bp | TCCAACTGGACGGTTTGGAGCTTGGCCAGCTCTTTTTaGTCCGTTCCCAGGTCTTCACAGCCGGCTTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: SNWTVWSLASSF*SVPRSSQPAST Trigger: GGTTGAAGCCGGCTGTGAAGACCTGGGAACGGACAAAAAAGAGCTGGCCAAGCTCCAAACCGTCCAGTTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | CAGGCTTGCATTTACTTGTGCACTGTGATTGACAGGCATCAACTGAGAAAAGACCCAGGCGGTCCAGGTTaGCCCCCTGCTGCAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QACIYLCTVIDRHQLRKDPGGPG*PPAATP Trigger: AGGCGTTGCAGCAGGGGGGCAACCTGGACCGCCTGG...GTCTTTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | GACGAGGTCAGAGGATGGAGGCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTTCAGAAGGCTCTCGTTaGCACGTAGCAGATCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DEVRGWRPLPERFSEDRLSEGSR*HVADRS Trigger: AGAGCGATCTGCTACGTGGCAACGAGAGCCTTCTGA...AAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTCCATCCTCTGACCTCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCTGTCTGTCATGGCTATaGCATTGCCCACAATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTCSSAVGTISPRAAWVICLSWL*HCPQCL Trigger: CAAACATTGTGGGCAATGGCATAGCCATGACAGACA...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CCA 90 bp | GACGAGGTCAGAGGATGGAGGCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTATTCATCCTCGGTACTaGGGTTGCCATCCGATTCGC | + |
|
Preference number: 4 (lower is better) Translates to: DEVRGWRPLPERFSEDRLIHPRY*GCHPIR Trigger: GCGAATCGGATGGCAACCCCAGTACCGAGGATGAAT...AAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTCCATCCTCTGACCTCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR TCA 90 bp | GACGAGGTCAGAGGATGGAGGCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTTGGGAGGCCACTGTCTaGATGCCTTCTCTTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: DEVRGWRPLPERFSEDRLWEATV*MPSLFT Trigger: AGTGAAAAGAGAAGGCATTCAGACAGTGGCCTCCCA...AAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTCCATCCTCTGACCTCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | GACGAGGTCAGAGGATGGAGGCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTTGTGGCTCTCGAGGATaGTGTACAACTCAGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DEVRGWRPLPERFSEDRLCGSRG*CTTQGR Trigger: TCTACCCTGAGTTGTACAGCATCCTCGAGAGCCACA...AAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTCCATCCTCTGACCTCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | GACGAGGTCAGAGGATGGAGGCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTCTCTTTTCACTTCAGTaGAGGGTATCAGCCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DEVRGWRPLPERFSEDRLLFSLQ*RVSALG Trigger: TCCCAGGGCTGATACCCTGCACTGAAGTGAAAAGAG...AAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTCCATCCTCTGACCTCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CCA 90 bp | GTAGAGTTGGCAAGGTCTGCTAGAAACGGTACTTTTCCATTCTGTTTGGGGGAACACACGCAGGCGACATaGTCCGGCGAGAAGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VELARSARNGTFPFCLGEHTQAT*SGEKAS Trigger: ACTGGCCTTCTCGCCGGACCATGTCGCCTGCGTGTG...TTCCCCCAAACAGAATGGAAAAGTACCGTTTCTAGCAGACCTTGCCAACTCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | CTGATTCCTCATCAGGAATCACTAGAGGATCCTTTGCAGCATCTTCAAGCATTGGATGTCCGCCGCACTTaGAATCTGCCCGGTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LIPHQESLEDPLQHLQALDVRRT*NLPGGG Trigger: TCCCCCACCGGGCAGATTGCAAGTGCGGCGGACATC...CAATGCTTGAAGATGCTGCAAAGGATCCTCTAGTGATTCCTGATGAGGAATCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | TGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACACCCGCCACTTCTCGGTaGGCCTCCTGTCCTTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CNSVQGDHGVYHIPFTHTPATSR*ASCPSE Trigger: CTCGGAAGGACAGGAGGCGCACCGAGAAGTGGCGGG...TGTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCCCATACTGGTTAATTTaGACGGGTGTAGTAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTCSSAVGTISPRAAWVIPYWLI*TGVVKV Trigger: GACTTTTACTACACCCGTGCAAATTAACCAGTATGG...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CCA 90 bp | GGTAGTCTGCCATACACGCCCAAGAATTCCAGCTTTAACATGCAGAATAACAAGCACACGCAGGCGACATaGTCCGGCGAGAAGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSLPYTPKNSSFNMQNNKHTQAT*SGEKAS Trigger: ACTGGCCTTCTCGCCGGACCATGTCGCCTGCGTGTG...CTTGTTATTCTGCATGTTAAAGCTGGAATTCTTGGGCGTGTATGGCAGACTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | ACTGATGGCGGTCGGATGACTTGGGTCCCCAAATATTATCAGAGAGAGAAAGATTGCTGCAGCAGCGGATaGTTGGCCGACTCGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TDGGRMTWVPKYYQREKDCCSSG*LADSKL Trigger: CAGCTTCGAGTCGGCCAACCATCCGCTGCTGCAGCA...ATCTTTCTCTCTCTGATAATATTTGGGGACCCAAGTCATCCGACCGCCATCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CCA 90 bp | CTGATTCCTCATCAGGAATCACTAGAGGATCCTTTGCAGCATCTTCAAGCATTGTCACCCAGGGCAGCCTaGGTCATCGGGCCGGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LIPHQESLEDPLQHLQALSPRAA*VIGPDN Trigger: ATTGTCCGGCCCGATGACCCAGGCTGCCCTGGGTGA...CAATGCTTGAAGATGCTGCAAAGGATCCTCTAGTGATTCCTGATGAGGAATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCACTCCATTGTGTCCCTaGATAAAAGAATTGCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: LTCSSAVGTISPRAAWVITPLCP*IKELPL Trigger: TAATGGCAATTCTTTTATTCAGGGACACAATGGAGT...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR TCA 90 bp | TTGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACCTGGTGGACTGCTGTTaGGGCGTGGCTCACCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQFCARRSRGLPYSIHTYLVDCC*GVAHLL Trigger: GAGCAGGTGAGCCACGCCTCAACAGCAGTCCACCAG...GTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | TTGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACGCCGCACTTGCAATCTaGCCGGTGGGGGAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQFCARRSRGLPYSIHTYAALAI*PVGEEE Trigger: CTCTTCCTCCCCCACCGGGCAGATTGCAAGTGCGGC...GTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | TGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACAGTGATCTTGGCCAGGTaGCGCTTCTCAGCCGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CNSVQGDHGVYHIPFTHTVILAR*RFSAGE Trigger: CTCGCCGGCTGAGAAGCGGCACCTGGCCAAGATCAC...TGTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTTCAAAAATACAAACCCACACAGTGGAGACACCAACACACATCCAGAGCAGTGATCTTGGCCAGGTaGCGCTTCTCAGCCGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CFQKYKPTQWRHQHTSRAVILAR*RFSAGE Trigger: CTCGCCGGCTGAGAAGCGGCACCTGGCCAAGATCAC...TGCTCTGGATGTGTGTTGGTGTCTCCACTGTGTGGGTTTGTATTTTTGAAAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CCA 90 bp | TTGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACGCAGCAGCGGATGGTTaGCCGACTCGAAGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQFCARRSRGLPYSIHTYAAADG*PTRSCG Trigger: GCCACAGCTTCGAGTCGGCCAACCATCCGCTGCTGC...GTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | CTGATTCCTCATCAGGAATCACTAGAGGATCCTTTGCAGCATCTTCAAGCATTGTGCTGCAGCAGCGGATaGTTGGCCGACTCGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIPHQESLEDPLQHLQALCCSSG*LADSKL Trigger: CAGCTTCGAGTCGGCCAACCATCCGCTGCTGCAGCA...CAATGCTTGAAGATGCTGCAAAGGATCCTCTAGTGATTCCTGATGAGGAATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCCAGGTCTTCACAGCCGGCTTCAACCATGCCGTCCAGGACGTACTTGGATTGGACAATGCCATACTaGTTAATTTGCACGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VPRSSQPASTMPSRTYLDWTMPY*LICTGV Trigger: TACACCCGTGCAAATTAACCAGTATGGCATTGTCCA...ATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CCA 90 bp | GTTCCCAGGTCTTCACAGCCGGCTTCAACCATGCCGTCCAGGACGTACTTGGATCCAGAATTAGGGATCTaGACAATGCCATACTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VPRSSQPASTMPSRTYLDPELGI*TMPYWL Trigger: TAACCAGTATGGCATTGTCCAGATCCCTAATTCTGG...ATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CAA 72 bp | AGCTCTCCATCCTCGGGGCTTCGCAAAGAAAAGGATTaGCTCCTGTTAAAGCAGAGAAGGAGGGATGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSPSSGLRKEKD*LLLKQRRRDVE Trigger: CTCCACATCCCTCCTTCTCTGCTTTAACAGGAGCAAATCCTTTTCTTTGCGAAGCCCCGAGGATGGAGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | GGTAGTCTGCCATACACGCCCAAGAATTCCAGCTTTAACATGCAGAATAACAAGGCTTGTAGAGCTCCTTaGGCGCGTTGCGCGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSLPYTPKNSSFNMQNNKACRAP*ARCATS Trigger: AGAAGTCGCGCAACGCGCTCAAGGAGCTCTACAAGC...CTTGTTATTCTGCATGTTAAAGCTGGAATTCTTGGGCGTGTATGGCAGACTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATAGCGGCTGCGTGCTGGTaGCTGCCCAGAAGTTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSYILCRVSLQVRHSKTIAAACW*LPRSSE Trigger: CTCGGAACTTCTGGGCAGGCACCAGCACGCAGCCGC...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | CTGATTCCTCATCAGGAATCACTAGAGGATCCTTTGCAGCATCTTCAAGCATTGTTGTACCAGAGCTGCTaGAGCAGCGGATGGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIPHQESLEDPLQHLQALLYQSC*SSGWLA Trigger: GGCCAACCATCCGCTGCTGCAGCAGCTCTGGTACAA...CAATGCTTGAAGATGCTGCAAAGGATCCTCTAGTGATTCCTGATGAGGAATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCTTTCTGGGGGAGAATTAATATGGGGTACTTATCTACCTGACTCTTCATTGTACCAGAGCTGCTaGAGCAGCGGATGGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RELSGGELIWGTYLPDSSLYQSC*SSGWLA Trigger: GGCCAACCATCCGCTGCTGCAGCAGCTCTGGTACAA...TGAAGAGTCAGGTAGATAAGTACCCCATATTAATTCTCCCCCAGAAAGCTCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | GGTAGTCTGCCATACACGCCCAAGAATTCCAGCTTTAACATGCAGAATAACAAGGCCTTGTACCAGAGCTaGTGCAGCAGCGGATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSLPYTPKNSSFNMQNNKALYQS*CSSGWL Trigger: CAACCATCCGCTGCTGCAGCAGCTCTGGTACAAGGC...CTTGTTATTCTGCATGTTAAAGCTGGAATTCTTGGGCGTGTATGGCAGACTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | ACTGATGGCGGTCGGATGACTTGGGTCCCCAAATATTATCAGAGAGAGAAAGATCATCCGATTCGCTTTTaGACTGGGTCTCGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TDGGRMTWVPKYYQREKDHPIRF*TGSRRG Trigger: ACCCCTCCGAGACCCAGTCCAAAAGCGAATCGGATG...ATCTTTCTCTCTCTGATAATATTTGGGGACCCAAGTCATCCGACCGCCATCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCTTTCTGGGGGAGAATTAATATGGGGTACTTATCTACCTGACTCTTCAGGCTGTAGGAGGTGGTaGCTGCTGAGTTCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RELSGGELIWGTYLPDSSGCRRW*LLSSQQ Trigger: CTGCTGTGAACTCAGCAGCCACCACCTCCTACAGCC...TGAAGAGTCAGGTAGATAAGTACCCCATATTAATTCTCCCCCAGAAAGCTCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CCA 90 bp | CTGATTCCTCATCAGGAATCACTAGAGGATCCTTTGCAGCATCTTCAAGCATTGCCTGCTCTTCAGCTGTaGGTACGATCTCACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LIPHQESLEDPLQHLQALPALQL*VRSHPG Trigger: CCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGG...CAATGCTTGAAGATGCTGCAAAGGATCCTCTAGTGATTCCTGATGAGGAATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGTCAGATATATGGGAGTTTTCCATCACACGCACGCAGACACCCACACACTGCGCGACTTCTCCTTaGAACAATACACCGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSDIWEFSITRTQTPTHCATSP*NNTPSP Trigger: AGGAGACGGTGTATTGTTTCAAGGAGAAGTCGCGCA...GTGTGTGGGTGTCTGCGTGCGTGTGATGGAAAACTCCCATATATCTGACAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | TTGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACGGAGGTGGTGGCTGCTaGGTTCACAGCAGAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQFCARRSRGLPYSIHTYGGGGC*VHSRTL Trigger: CAGAGTTCTGCTGTGAACTCAGCAGCCACCACCTCC...GTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCAAAAATACAAACCCACACAGTGGAGACACCAACACACATCCAGAGCAGGAGGTGGTGGCTGCTaGGTTCACAGCAGAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CFQKYKPTQWRHQHTSRAGGGGC*VHSRTL Trigger: CAGAGTTCTGCTGTGAACTCAGCAGCCACCACCTCC...TGCTCTGGATGTGTGTTGGTGTCTCCACTGTGTGGGTTTGTATTTTTGAAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | GCATCGACTATATCTGTCTATCCATGTGCATGGCAAACCTTCCACATGATATTTCTGCGTGCTGGTGCCTaGCCAGAAGTTCCGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASTISVYPCAWQTFHMIFLRAGA*PEVPSG Trigger: TCCACTCGGAACTTCTGGGCAGGCACCAGCACGCAG...AAATATCATGTGGAAGGTTTGCCATGCACATGGATAGACAGATATAGTCGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAGGGAGACATACAAGGTATAAATAAAAACTCACTGTACTTACTCAGATCTCCAGGCGGTCCAGGTTaGCCCCCTGCTGCAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKGDIQGINKNSLYLLRSPGGPG*PPAATP Trigger: AGGCGTTGCAGCAGGGGGGCAACCTGGACCGCCTGG...AGATCTGAGTAAGTACAGTGAGTTTTTATTTATACCTTGTATGTCTCCCTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCTTGCATTTACTTGTGCACTGTGATTGACAGGCATCAACTGAGAAAAGACACAACTCAGGGTAGATaGCCTGGTGGAAGGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: QACIYLCTVIDRHQLRKDTTQGR*PGGRPR Trigger: TCGTGGCCTTCCACCAGGGCATCTACCCTGAGTTGT...GTCTTTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | CTTTTGTCAGATATATGGGAGTTTTCCATCACACGCACGCAGACACCCACACACCTCTTTTCACTTCAGTaGAGGGTATCAGCCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLSDIWEFSITRTQTPTHLFSLQ*RVSALG Trigger: TCCCAGGGCTGATACCCTGCACTGAAGTGAAAAGAG...GTGTGTGGGTGTCTGCGTGCGTGTGATGGAAAACTCCCATATATCTGACAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGGGAGACATACAAGGTATAAATAAAAACTCACTGTACTTACTCAGATCTGCGGCGGCTGCGTGCTaGTGCCTGCCCAGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKGDIQGINKNSLYLLRSAAAAC*CLPRSS Trigger: GGAACTTCTGGGCAGGCACCAGCACGCAGCCGCCGC...AGATCTGAGTAAGTACAGTGAGTTTTTATTTATACCTTGTATGTCTCCCTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | GTAGAGTTGGCAAGGTCTGCTAGAAACGGTACTTTTCCATTCTGTTTGGGGGAATATACTGGCTCCACGTaGCTAGAGAGGCTGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VELARSARNGTFPFCLGEYTGST*LERLRL Trigger: CAACCTCAGCCTCTCTAGCCACGTGGAGCCAGTATA...TTCCCCCAAACAGAATGGAAAAGTACCGTTTCTAGCAGACCTTGCCAACTCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTCAGATATATGGGAGTTTTCCATCACACGCACGCAGACACCCACACACGTGCTGGACTGTGGCTaGCTCACTTGTAAATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSDIWEFSITRTQTPTHVLDCG*LTCKCA Trigger: AGCACATTTACAAGTGAGCCAGCCACAGTCCAGCAC...GTGTGTGGGTGTCTGCGTGCGTGTGATGGAAAACTCCCATATATCTGACAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | ACTGATGGCGGTCGGATGACTTGGGTCCCCAAATATTATCAGAGAGAGAAAGATTGCGCGACTTCTCCTTaGAACAATACACCGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGGRMTWVPKYYQREKDCATSP*NNTPSP Trigger: AGGAGACGGTGTATTGTTTCAAGGAGAAGTCGCGCA...ATCTTTCTCTCTCTGATAATATTTGGGGACCCAAGTCATCCGACCGCCATCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR TCA 90 bp | CTTTTGTCAGATATATGGGAGTTTTCCATCACACGCACGCAGACACCCACACACTTTGGGTGGGTTCAGTaGCACTGTCTGTGTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSDIWEFSITRTQTPTHFGWVQ*HCLCIS Trigger: GGAAATACACAGACAGTGTCACTGAACCCACCCAAA...GTGTGTGGGTGTCTGCGTGCGTGTGATGGAAAACTCCCATATATCTGACAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | GCATCGACTATATCTGTCTATCCATGTGCATGGCAAACCTTCCACATGATATTTTATCAGCCCTGGGAATaGCACAGGGGCACTAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASTISVYPCAWQTFHMIFYQPWE*HRGTRA Trigger: AGCCCTAGTGCCCCTGTGTCATTCCCAGGGCTGATA...AAATATCATGTGGAAGGTTTGCCATGCACATGGATAGACAGATATAGTCGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | GGTAGTCTGCCATACACGCCCAAGAATTCCAGCTTTAACATGCAGAATAACAAGTCCATCCCATTCTCCTaGTTGATGTCCGCCGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GSLPYTPKNSSFNMQNNKSIPFS*LMSAAL Trigger: AAGTGCGGCGGACATCAAGCAGGAGAATGGGATGGA...CTTGTTATTCTGCATGTTAAAGCTGGAATTCTTGGGCGTGTATGGCAGACTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | TTGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACACAACTCAGGGTAGATaGCCTGGTGGAAGGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: LQFCARRSRGLPYSIHTYTTQGR*PGGRPR Trigger: TCGTGGCCTTCCACCAGGGCATCTACCCTGAGTTGT...GTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTAAACTTAACCCTGTTTGACGGTACAAAAGAACCATCAACACTGCTGTTGCATCCGATTCGCTTTTaGACTGGGTCTCGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VVNLTLFDGTKEPSTLLLHPIRF*TGSRRG Trigger: ACCCCTCCGAGACCCAGTCCAAAAGCGAATCGGATG...CAACAGCAGTGTTGATGGTTCTTTTGTACCGTCAAACAGGGTTAAGTTTACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCTTTCTGGGGGAGAATTAATATGGGGTACTTATCTACCTGACTCTTCACCTCATGTCCCTTGCTaGATTCATCCTCGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RELSGGELIWGTYLPDSSPHVPC*IHPRYW Trigger: CCAGTACCGAGGATGAATCCAGCAAGGGACATGAGG...TGAAGAGTCAGGTAGATAAGTACCCCATATTAATTCTCCCCCAGAAAGCTCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CCA 90 bp | GCATCGACTATATCTGTCTATCCATGTGCATGGCAAACCTTCCACATGATATTTGGCTGTAGGAGGTGGTaGCTGCTGAGTTCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASTISVYPCAWQTFHMIFGCRRW*LLSSQQ Trigger: CTGCTGTGAACTCAGCAGCCACCACCTCCTACAGCC...AAATATCATGTGGAAGGTTTGCCATGCACATGGATAGACAGATATAGTCGATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | GCATCGACTATATCTGTCTATCCATGTGCATGGCAAACCTTCCACATGATATTTTCCCATTCTCCTGCTTaGTGTCCGCCGCACTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASTISVYPCAWQTFHMIFSHSPA*CPPHLQ Trigger: TTGCAAGTGCGGCGGACATCAAGCAGGAGAATGGGA...AAATATCATGTGGAAGGTTTGCCATGCACATGGATAGACAGATATAGTCGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCTTTCTGGGGGAGAATTAATATGGGGTACTTATCTACCTGACTCTTCAGCGCCTGAAAGTGGATaGGGAGACAAATCCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: RELSGGELIWGTYLPDSSAPESG*GDKSSC Trigger: ACATGAGGATTTGTCTCCTCATCCACTTTCAGGCGC...TGAAGAGTCAGGTAGATAAGTACCCCATATTAATTCTCCCCCAGAAAGCTCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR TCA 90 bp | GTGGTAAACTTAACCCTGTTTGACGGTACAAAAGAACCATCAACACTGCTGTTGGCCATCAGATGCGCCTaGAAGTGGATGAGGAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: VVNLTLFDGTKEPSTLLLAIRCA*KWMRRQ Trigger: TTGTCTCCTCATCCACTTTCAGGCGCATCTGATGGC...CAACAGCAGTGTTGATGGTTCTTTTGTACCGTCAAACAGGGTTAAGTTTACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCAAAAATACAAACCCACACAGTGGAGACACCAACACACATCCAGAGCAGCCATCAGATGCGCCTaGAAGTGGATGAGGAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: CFQKYKPTQWRHQHTSRAAIRCA*KWMRRQ Trigger: TTGTCTCCTCATCCACTTTCAGGCGCATCTGATGGC...TGCTCTGGATGTGTGTTGGTGTCTCCACTGTGTGGGTTTGTATTTTTGAAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | GTGGTAAACTTAACCCTGTTTGACGGTACAAAAGAACCATCAACACTGCTGTTGTCAGAAGGCTCTCGTTaGCACGTAGCAGATCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVNLTLFDGTKEPSTLLLSEGSR*HVADRS Trigger: AGAGCGATCTGCTACGTGGCAACGAGAGCCTTCTGA...CAACAGCAGTGTTGATGGTTCTTTTGTACCGTCAAACAGGGTTAAGTTTACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | GTGGTAAACTTAACCCTGTTTGACGGTACAAAAGAACCATCAACACTGCTGTTGCACAGTACATTTGCTTaGCACAGGTGCAGACACGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVNLTLFDGTKEPSTLLLHSTFA*HRCRHG Trigger: CCCGTGTCTGCACCTGTGGCAAGCAAATGTACTGTG...CAACAGCAGTGTTGATGGTTCTTTTGTACCGTCAAACAGGGTTAAGTTTACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | TGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACAATTCATCCTCGGTACTaGGGTTGCCATCCGATTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CNSVQGDHGVYHIPFTHTIHPRY*GCHPIR Trigger: GCGAATCGGATGGCAACCCCAGTACCGAGGATGAAT...TGTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | TTGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACCCTCATGTCCCTTGCTaGATTCATCCTCGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQFCARRSRGLPYSIHTYPHVPC*IHPRYW Trigger: CCAGTACCGAGGATGAATCCAGCAAGGGACATGAGG...GTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTCAGATATATGGGAGTTTTCCATCACACGCACGCAGACACCCACACACTTGTTGCATATATACTaGCTCCACGTGGCTAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSDIWEFSITRTQTPTHLLHIY*LHVARE Trigger: CTCTCTAGCCACGTGGAGCCAGTATATATGCAACAA...GTGTGTGGGTGTCTGCGTGCGTGTGATGGAAAACTCCCATATATCTGACAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | CTGATTCCTCATCAGGAATCACTAGAGGATCCTTTGCAGCATCTTCAAGCATTGATGTCTTCATCCAACTaGACGGTTTGGAGCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIPHQESLEDPLQHLQALMSSSN*TVWSLA Trigger: GGCCAAGCTCCAAACCGTCCAGTTGGATGAAGACAT...CAATGCTTGAAGATGCTGCAAAGGATCCTCTAGTGATTCCTGATGAGGAATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTAAACTTAACCCTGTTTGACGGTACAAAAGAACCATCAACACTGCTGTTGGCGCCTGAAAGTGGATaGGGAGACAAATCCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VVNLTLFDGTKEPSTLLLAPESG*GDKSSC Trigger: ACATGAGGATTTGTCTCCTCATCCACTTTCAGGCGC...CAACAGCAGTGTTGATGGTTCTTTTGTACCGTCAAACAGGGTTAAGTTTACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTAAACTTAACCCTGTTTGACGGTACAAAAGAACCATCAACACTGCTGTTGTGGGAGGCCACTGTCTaGATGCCTTCTCTTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: VVNLTLFDGTKEPSTLLLWEATV*MPSLFT Trigger: AGTGAAAAGAGAAGGCATTCAGACAGTGGCCTCCCA...CAACAGCAGTGTTGATGGTTCTTTTGTACCGTCAAACAGGGTTAAGTTTACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | TGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACATGTGGCTCTCGAGGATaGTGTACAACTCAGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CNSVQGDHGVYHIPFTHTCGSRG*CTTQGR Trigger: TCTACCCTGAGTTGTACAGCATCCTCGAGAGCCACA...TGTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | GGTAGTCTGCCATACACGCCCAAGAATTCCAGCTTTAACATGCAGAATAACAAGAATCCTCATGTCCCTTaGTGGATTCATCCTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GSLPYTPKNSSFNMQNNKNPHVP*WIHPRY Trigger: GTACCGAGGATGAATCCAGCAAGGGACATGAGGATT...CTTGTTATTCTGCATGTTAAAGCTGGAATTCTTGGGCGTGTATGGCAGACTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCTTGCATTTACTTGTGCACTGTGATTGACAGGCATCAACTGAGAAAAGACAATCCTCATGTCCCTTaGTGGATTCATCCTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QACIYLCTVIDRHQLRKDNPHVP*WIHPRY Trigger: GTACCGAGGATGAATCCAGCAAGGGACATGAGGATT...GTCTTTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | GCATCGACTATATCTGTCTATCCATGTGCATGGCAAACCTTCCACATGATATTTCCGGACAATAGGTCTTaGCCCGGAATAAGGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ASTISVYPCAWQTFHMIFPDNRS*PGIREQ Trigger: CTGTTCCCTTATTCCGGGGCAAGACCTATTGTCCGG...AAATATCATGTGGAAGGTTTGCCATGCACATGGATAGACAGATATAGTCGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATACGTAGCAGATCGCTCTaGGGCAGGGACCAAAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSYILCRVSLQVRHSKTIRSRSL*GRDQRN Trigger: GTTTCTTTGGTCCCTGCCCCAGAGCGATCTGCTACG...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | GCATCGACTATATCTGTCTATCCATGTGCATGGCAAACCTTCCACATGATATTTTATACTGGCTCCACGTaGCTAGAGAGGCTGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASTISVYPCAWQTFHMIFYTGST*LERLRL Trigger: CAACCTCAGCCTCTCTAGCCACGTGGAGCCAGTATA...AAATATCATGTGGAAGGTTTGCCATGCACATGGATAGACAGATATAGTCGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | ACTGATGGCGGTCGGATGACTTGGGTCCCCAAATATTATCAGAGAGAGAAAGATTTGTTGCATATATACTaGCTCCACGTGGCTAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TDGGRMTWVPKYYQREKDLLHIY*LHVARE Trigger: CTCTCTAGCCACGTGGAGCCAGTATATATGCAACAA...ATCTTTCTCTCTCTGATAATATTTGGGGACCCAAGTCATCCGACCGCCATCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCTTTCTGGGGGAGAATTAATATGGGGTACTTATCTACCTGACTCTTCACTCCCATTAAGGAACTaGCCGTTGGCTCCAGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: RELSGGELIWGTYLPDSSLPLRN*PLAPEL Trigger: TAATTCTGGAGCCAACGGCCAGTTCCTTAATGGGAG...TGAAGAGTCAGGTAGATAAGTACCCCATATTAATTCTCCCCCAGAAAGCTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCAAAAATACAAACCCACACAGTGGAGACACCAACACACATCCAGAGCATTTGGGTGGGTTCAGTaGCACTGTCTGTGTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFQKYKPTQWRHQHTSRAFGWVQ*HCLCIS Trigger: GGAAATACACAGACAGTGTCACTGAACCCACCCAAA...TGCTCTGGATGTGTGTTGGTGTCTCCACTGTGTGGGTTTGTATTTTTGAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCTTTCTGGGGGAGAATTAATATGGGGTACTTATCTACCTGACTCTTCAAACTCTGGAGGACTTTaGATTCTTTCACATCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RELSGGELIWGTYLPDSSNSGGL*ILSHPG Trigger: CCCAGGATGTGAAAGAATTCAAAGTCCTCCAGAGTT...TGAAGAGTCAGGTAGATAAGTACCCCATATTAATTCTCCCCCAGAAAGCTCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATAAACGGTGTATACCACTaGACTGGGGGTAAGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSYILCRVSLQVRHSKTINGVYH*TGGKRA Trigger: AGCCCTCTTACCCCCAGTGCAGTGGTATACACCGTT...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | CTGATTCCTCATCAGGAATCACTAGAGGATCCTTTGCAGCATCTTCAAGCATTGATGACACAGTACATTTaGTTGCCACAGGTGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LIPHQESLEDPLQHLQALMTQYI*LPQVQT Trigger: TGTCTGCACCTGTGGCAAGCAAATGTACTGTGTCAT...CAATGCTTGAAGATGCTGCAAAGGATCCTCTAGTGATTCCTGATGAGGAATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR CAA 72 bp | GATGCCAGAGAGTCAAAGGGTAGGGAGCCCGGTCATTaGATCTTGGCTATTTTTGTTATTCTTACTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DARESKGREPGH*ILAIFVILTLG Trigger: ACCAAGAGTAAGAATAACAAAAATAGCCAAGATCAAATGACCGGGCTCCCTACCCTTTGACTCTCTGGCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR TCA 90 bp | TGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACAAACTCTGGAGGACTTTaGATTCTTTCACATCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CNSVQGDHGVYHIPFTHTNSGGL*ILSHPG Trigger: CCCAGGATGTGAAAGAATTCAAAGTCCTCCAGAGTT...TGTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | TTGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACAGTGTTGCTGACAGATaGCACAGTACATTTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQFCARRSRGLPYSIHTYSVADR*HSTFAC Trigger: GCAAGCAAATGTACTGTGTCATCTGTCAGCAACACT...GTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAGGGAGACATACAAGGTATAAATAAAAACTCACTGTACTTACTCAGATCTGCAAGGGGAATTTCCTaGGCAGCCGGTACTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKGDIQGINKNSLYLLRSARGIS*AAGTCP Trigger: TGGACAAGTACCGGCTGCGCAGGAAATTCCCCTTGC...AGATCTGAGTAAGTACAGTGAGTTTTTATTTATACCTTGTATGTCTCCCTTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | TGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACATTCCGAAGACAGGCTTaGATTTACTTGTGCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CNSVQGDHGVYHIPFTHTFRRQA*IYLCTV Trigger: CACAGTGCACAAGTAAATGCAAGCCTGTCTTCGGAA...TGTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGGGAGACATACAAGGTATAAATAAAAACTCACTGTACTTACTCAGATCTGATTCGCTTTTGGACTaGGTCTCGGAGGGGTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LKGDIQGINKNSLYLLRSDSLLD*VSEGFR Trigger: CCGAAACCCCTCCGAGACCCAGTCCAAAAGCGAATC...AGATCTGAGTAAGTACAGTGAGTTTTTATTTATACCTTGTATGTCTCCCTTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCTTTCTGGGGGAGAATTAATATGGGGTACTTATCTACCTGACTCTTCATGTTTGAAGACATTTTaGGTGGGTTCAGTGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: RELSGGELIWGTYLPDSSCLKTF*VGSVTL Trigger: CAGTGTCACTGAACCCACCCAAAATGTCTTCAAACA...TGAAGAGTCAGGTAGATAAGTACCCCATATTAATTCTCCCCCAGAAAGCTCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CCA 90 bp | GCATCGACTATATCTGTCTATCCATGTGCATGGCAAACCTTCCACATGATATTTCTCCCATTAAGGAACTaGCCGTTGGCTCCAGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: ASTISVYPCAWQTFHMIFLPLRN*PLAPEL Trigger: TAATTCTGGAGCCAACGGCCAGTTCCTTAATGGGAG...AAATATCATGTGGAAGGTTTGCCATGCACATGGATAGACAGATATAGTCGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR CAA 72 bp | GCTAGAATTAATGCCTCTGTCAAAGAGGTGCATCTTTaGAGACCCCACTTTAATGGTCCATGGAGACTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ARINASVKEVHL*RPHFNGPWRLE Trigger: TTCTAGTCTCCATGGACCATTAAAGTGGGGTCTCAAAAGATGCACCTCTTTGACAGAGGCATTAATTCTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | TGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACATCATGGCTATGCCATTaGCCACAATGTTTGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: CNSVQGDHGVYHIPFTHTSWLCH*PQCLKT Trigger: TGTCTTCAAACATTGTGGGCAATGGCATAGCCATGA...TGTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTTCAAAAATACAAACCCACACAGTGGAGACACCAACACACATCCAGAGCATCATGGCTATGCCATTaGCCACAATGTTTGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: CFQKYKPTQWRHQHTSRASWLCH*PQCLKT Trigger: TGTCTTCAAACATTGTGGGCAATGGCATAGCCATGA...TGCTCTGGATGTGTGTTGGTGTCTCCACTGTGTGGGTTTGTATTTTTGAAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CCA 90 bp | TGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACATGGACAATGCCATACTaGTTAATTTGCACGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CNSVQGDHGVYHIPFTHTWTMPY*LICTGV Trigger: TACACCCGTGCAAATTAACCAGTATGGCATTGTCCA...TGTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR CAA 72 bp | GAATCACTAGAGGATCCTTTGCAGCATCTTCAAGCATaGGTTTATGTAAGAAGGATATTCTGCCACGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ESLEDPLQHLQA*VYVRRIFCHVN Trigger: GTTCACGTGGCAGAATATCCTTCTTACATAAACCAATGCTTGAAGATGCTGCAAAGGATCCTCTAGTGATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | CTGATTCCTCATCAGGAATCACTAGAGGATCCTTTGCAGCATCTTCAAGCATTGACTCCATTGTGTCCCTaGATAAAAGAATTGCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: LIPHQESLEDPLQHLQALTPLCP*IKELPL Trigger: TAATGGCAATTCTTTTATTCAGGGACACAATGGAGT...CAATGCTTGAAGATGCTGCAAAGGATCCTCTAGTGATTCCTGATGAGGAATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATACTTGTGCACTGTGATTaGCAGGCATCAACTGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSYILCRVSLQVRHSKTILVHCD*QASTEK Trigger: TTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAG...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTTCAAAAATACAAACCCACACAGTGGAGACACCAACACACATCCAGAGCAATTGCTGGTACCAAATaGAGCTTTTACCTTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CFQKYKPTQWRHQHTSRAIAGTK*SFYLVK Trigger: CTTCACAAGGTAAAAGCTTCATTTGGTACCAGCAAT...TGCTCTGGATGTGTGTTGGTGTCTCCACTGTGTGGGTTTGTATTTTTGAAAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATATGTCTGTCATGGCTATaGCATTGCCCACAATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSYILCRVSLQVRHSKTICLSWL*HCPQCL Trigger: CAAACATTGTGGGCAATGGCATAGCCATGACAGACA...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | GCATCGACTATATCTGTCTATCCATGTGCATGGCAAACCTTCCACATGATATTTACAGTTCTGAAGGGTTaGATAGTTAGTGTTGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASTISVYPCAWQTFHMIFTVLKG*IVSVAD Trigger: GTCAGCAACACTAACTATGCAACCCTTCAGAACTGT...AAATATCATGTGGAAGGTTTGCCATGCACATGGATAGACAGATATAGTCGATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR TCA 90 bp | CTGAAGGGAGACATACAAGGTATAAATAAAAACTCACTGTACTTACTCAGATCTTTGACAGGCATCAACTaGGAAAAGACCAGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKGDIQGINKNSLYLLRSLTGIN*EKTRPL Trigger: AAGAGGCCTGGTCTTTTCTCAGTTGATGCCTGTCAA...AGATCTGAGTAAGTACAGTGAGTTTTTATTTATACCTTGTATGTCTCCCTTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATAGCTTGCATTTACTTGTaGACTGTGATTGACAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSYILCRVSLQVRHSKTIACIYL*TVIDRH Trigger: ATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGC...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATACCAGAATTAGGGATCTaGACAATGCCATACTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VSYILCRVSLQVRHSKTIPELGI*TMPYWL Trigger: TAACCAGTATGGCATTGTCCAGATCCCTAATTCTGG...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR CAA 72 bp | ATTCTGATTCCTCATCAGGAATCACTAGAGGATCCTTaGCAGCATCTTCAAGCATTGGTTTATGTAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILIPHQESLEDP*QHLQALVYVRR Trigger: CCTTCTTACATAAACCAATGCTTGAAGATGCTGCAAAGGATCCTCTAGTGATTCCTGATGAGGAATCAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR CAA 72 bp | ACAACAACCTCTGGCCCAAATTGCATATTTCAGCAATaGAGGGACATTCACCAATTTCACAAAAATGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: TTTSGPNCIFQQ*RDIHQFHKNGI Trigger: AATCCCATTTTTGTGAAATTGGTGAATGTCCCTCAATTGCTGAAATATGCAATTTGGGCCAGAGGTTGTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR CAA 72 bp | AGAGAGTCAAAGGGTAGGGAGCCCGGTCATTTGATCTaGGCTATTTTTGTTATTCTTACTCTTGGTAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: RESKGREPGHLI*AIFVILTLGKY Trigger: ATATTTACCAAGAGTAAGAATAACAAAAATAGCCAAGATCAAATGACCGGGCTCCCTACCCTTTGACTCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CCA 90 bp | CTGAAGGGAGACATACAAGGTATAAATAAAAACTCACTGTACTTACTCAGATCTTGTTTGAAGACATTTTaGGTGGGTTCAGTGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LKGDIQGINKNSLYLLRSCLKTF*VGSVTL Trigger: CAGTGTCACTGAACCCACCCAAAATGTCTTCAAACA...AGATCTGAGTAAGTACAGTGAGTTTTTATTTATACCTTGTATGTCTCCCTTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR CAA 72 bp | CTATTTTTGTTATTCTTACTCTTGGTAAATATCCCGTaGAAAAACTATTGTTGGGCAGTGGTGGCTCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LFLLFLLLVNIP*KNYCWAVVAHD Trigger: GTCATGAGCCACCACTGCCCAACAATAGTTTTTCAACGGGATATTTACCAAGAGTAAGAATAACAAAAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| 3UTR CAA 72 bp | AGTGTAAGTTTGATTTGCTTTGGTTTGGTACATTTTTaGGAGATGGACTCTCACCATGTAACCTACTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSLICFGLVHF*EMDSHHVTYFS Trigger: GCTAAAGTAGGTTACATGGTGAGAGTCCATCTCCAAAAAATGTACCAAACCAAAGCAAATCAAACTTACACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR GCA 90 bp | CTGAAGGGAGACATACAAGGTATAAATAAAAACTCACTGTACTTACTCAGATCTCCATACTGGTTAATTTaGACGGGTGTAGTAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKGDIQGINKNSLYLLRSPYWLI*TGVVKV Trigger: GACTTTTACTACACCCGTGCAAATTAACCAGTATGG...AGATCTGAGTAAGTACAGTGAGTTTTTATTTATACCTTGTATGTCTCCCTTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| 3UTR CAA 72 bp | ACATTCACCAATTTCACAAAAATGGGATTTAGGTTCTaGATCAAAATGATGGGCACAGAATTCTTCATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFTNFTKMGFRF*IKMMGTEFFIG Trigger: CCCTATGAAGAATTCTGTGCCCATCATTTTGATCAAGAACCTAAATCCCATTTTTGTGAAATTGGTGAATGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS GCA 90 bp | AAGTTCCGAGTGGAGTTGTACCTGATCTGCCGCTCCCGCCGCCGCTaGCCCTTCCTCCCGGCTTACCCTGGAGGCAGCCGCGGCGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KFRVELYLICRSRRR*PFLPAYPGGSRGVP Trigger: GGGGACGCCGCGGCTGCCTCCAGGGTAAGCCGGGAGGAAGGGGCAGCGGCGGCGGGAGCGGCAGATCAGGTACAACTCCACTCGGAACTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS GCA 90 bp | GCGAGAAGGCCAGTGGGGGCTGCGCGGCGGCTGCGTGCTGGTGCCTaGCCAGAAGTTCCGAGTGGAGTTGTACCTGATCTGCCGCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ARRPVGAARRLRAGA*PEVPSGVVPDLPLP Trigger: CGGGAGCGGCAGATCAGGTACAACTCCACTCGGAACTTCTGGGCAGGCACCAGCACGCAGCCGCCGCGCAGCCCCCACTGGCCTTCTCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS GCA 90 bp | GGCGACATGGTCCGGCGAGAAGGCCAGTGGGGGCTGCGCGGCGGCTaGGTGCTGGTGCCTGCCCAGAAGTTCCGAGTGGAGTTGTACCTG | + |
|
Preference number: 5 (lower is better) Translates to: GDMVRREGQWGLRGG*VLVPAQKFRVELYL Trigger: CAGGTACAACTCCACTCGGAACTTCTGGGCAGGCACCAGCACGCAGCCGCCGCGCAGCCCCCACTGGCCTTCTCGCCGGACCATGTCGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | CTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCGGGCCGGACAATAGGTCTGCGCAGCCGGTACTaGTCCACGGCGCCCAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LWVRSHPGQPGSSGRTIGLRSRY*STAPSG Trigger: GCCGCTGGGCGCCGTGGACAAGTACCGGCTGCGCAG...ACCTATTGTCCGGCCCGATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS CCA 90 bp | GCTCGCGCCTTCAGAAGGCTCTCGTTGCCACGTAGCAGATCGCTCTaGGGCAGGGACCAAAGAAACCGGGCCAGGCGGTCCAGGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ARAFRRLSLPRSRSL*GRDQRNRARRSRLP Trigger: GGGCAACCTGGACCGCCTGGCCCGGTTTCTTTGGTCCCTGCCCCAGAGCGATCTGCTACGTGGCAACGAGAGCCTTCTGAAGGCGCGAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS GCA 90 bp | CCTGGTGGAAGGCCACGAGCGCTCGCGCCTTCAGAAGGCTCTCGTTaGCACGTAGCAGATCGCTCTGGGGCAGGGACCAAAGAAACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGGRPRALAPSEGSR*HVADRSGAGTKETG Trigger: CCCGGTTTCTTTGGTCCCTGCCCCAGAGCGATCTGCTACGTGGCAACGAGAGCCTTCTGAAGGCGCGAGCGCTCGTGGCCTTCCACCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS TCA 90 bp | GCGCCTCCTGTCCTTCCGAGGCGCTTTCCATCCCATTCTCCTGCTTaGTGTCCGCCGCACTTGCAATCTGCCCGGTGGGGGAGGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: APPVLPRRFPSHSPA*CPPHLQSARWGRKR Trigger: CCTCTTCCTCCCCCACCGGGCAGATTGCAAGTGCGGCGGACATCAAGCAGGAGAATGGGATGGAAAGCGCCTCGGAAGGACAGGAGGCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS GCA 90 bp | CGGTGCGCCTCCTGTCCTTCCGAGGCGCTTTCCATCCCATTCTCCTaGTTGATGTCCGCCGCACTTGCAATCTGCCCGGTGGGGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RCASCPSEALSIPFS*LMSAALAICPVGEE Trigger: TTCCTCCCCCACCGGGCAGATTGCAAGTGCGGCGGACATCAAGCAGGAGAATGGGATGGAAAGCGCCTCGGAAGGACAGGAGGCGCACCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCGGGCCGGACAATAGGTCTAGAGAGGCTGAGGTaGGTGACGCCATCAGATGCG | + |
|
Preference number: 5 (lower is better) Translates to: LWVRSHPGQPGSSGRTIGLERLR*VTPSDA Trigger: CGCATCTGATGGCGTCACCAACCTCAGCCTCTCTAG...ACCTATTGTCCGGCCCGATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | GACGAGGTCAGAGGATGGAGGCCACTCCCAGAGAGATTTTCCGAAGACAGGCTTGAGAGGCCGGTGATCTaGGCCAGGTGCCGCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: DEVRGWRPLPERFSEDRLERPVI*ARCRFS Trigger: TGAGAAGCGGCACCTGGCCAAGATCACCGGCCTCTC...AAGCCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTCCATCCTCTGACCTCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | CTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCGGGCCGGACAATAGGTGTCATGGCTATGCCATaGCCCACAATGTTTGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LWVRSHPGQPGSSGRTIGVMAMP*PTMFED Trigger: GTCTTCAAACATTGTGGGCAATGGCATAGCCATGAC...ACCTATTGTCCGGCCCGATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | GTGGTAAACTTAACCCTGTTTGACGGTACAAAAGAACCATCAACACTGCTGTTGCTGCGCAGCCGGTACTaGTCCACGGCGCCCAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VVNLTLFDGTKEPSTLLLLRSRY*STAPSG Trigger: GCCGCTGGGCGCCGTGGACAAGTACCGGCTGCGCAG...CAACAGCAGTGTTGATGGTTCTTTTGTACCGTCAAACAGGGTTAAGTTTACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS TCA 90 bp | CACGTGGCTAGAGAGGCTGAGGTTGGTGACGCCATCAGATGCGCCTaGAAGTGGATGAGGAGACAAATCCTCATGTCCCTTGCTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: HVAREAEVGDAIRCA*KWMRRQILMSLAGF Trigger: GAATCCAGCAAGGGACATGAGGATTTGTCTCCTCATCCACTTTCAGGCGCATCTGATGGCGTCACCAACCTCAGCCTCTCTAGCCACGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCCATTGCCCACAATGTTaGAAGACATTTTGGGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LTCSSAVGTISPRAAWVIHCPQC*KTFWVG Trigger: ACCCACCCAAAATGTCTTCAAACATTGTGGGCAATG...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | CTCACCTGCTCTTCAGCTGTGGGTACGATCTCACCCAGGGCAGCCTGGGTCATCGAACTCTGGAGGACTTaGAATTCTTTCACATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LTCSSAVGTISPRAAWVIELWRT*NSFTSW Trigger: CCAGGATGTGAAAGAATTCAAAGTCCTCCAGAGTTC...GATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGAAGAGCAGGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | GTTCCCAGGTCTTCACAGCCGGCTTCAACCATGCCGTCCAGGACGTACTTGGATTTAAGGAACTGGCCGTaGGCTCCAGAATTAGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: VPRSSQPASTMPSRTYLDLRNWP*APELGI Trigger: GATCCCTAATTCTGGAGCCAACGGCCAGTTCCTTAA...ATCCAAGTACGTCCTGGACGGCATGGTTGAAGCCGGCTGTGAAGACCTGGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS TCA 90 bp | GAGAGGCTGAGGTTGGTGACGCCATCAGATGCGCCTGAAAGTGGATaGGGAGACAAATCCTCATGTCCCTTGCTGGATTCATCCTCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ERLRLVTPSDAPESG*GDKSSCPLLDSSSV Trigger: TACCGAGGATGAATCCAGCAAGGGACATGAGGATTTGTCTCCTCATCCACTTTCAGGCGCATCTGATGGCGTCACCAACCTCAGCCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CCA 90 bp | GGAGGCAGCTGCAGTGGAGAGAATCCAATGCTCCCATTAAGGAACTaGCCGTTGGCTCCAGAATTAGGGATCTGGACAATGCCATACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGSCSGENPMLPLRN*PLAPELGIWTMPYW Trigger: CCAGTATGGCATTGTCCAGATCCCTAATTCTGGAGCCAACGGCCAGTTCCTTAATGGGAGCATTGGATTCTCTCCACTGCAGCTGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | CTTTTGTCAGATATATGGGAGTTTTCCATCACACGCACGCAGACACCCACACACCCATCCGATTCGCTTTaGGACTGGGTCTCGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLSDIWEFSITRTQTPTHPSDSL*DWVSEG Trigger: CCCCTCCGAGACCCAGTCCAAAAGCGAATCGGATGG...GTGTGTGGGTGTCTGCGTGCGTGTGATGGAAAACTCCCATATATCTGACAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS GCA 90 bp | CAGATGCGCCTGAAAGTGGATGAGGAGACAAATCCTCATGTCCCTTaGTGGATTCATCCTCGGTACTGGGGTTGCCATCCGATTCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QMRLKVDEETNPHVP*WIHPRYWGCHPIRF Trigger: AAAGCGAATCGGATGGCAACCCCAGTACCGAGGATGAATCCAGCAAGGGACATGAGGATTTGTCTCCTCATCCACTTTCAGGCGCATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CCA 90 bp | ATGCGCCTGAAAGTGGATGAGGAGACAAATCCTCATGTCCCTTGCTaGATTCATCCTCGGTACTGGGGTTGCCATCCGATTCGCTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: MRLKVDEETNPHVPC*IHPRYWGCHPIRFW Trigger: CCAAAAGCGAATCGGATGGCAACCCCAGTACCGAGGATGAATCCAGCAAGGGACATGAGGATTTGTCTCCTCATCCACTTTCAGGCGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | GGTAGTCTGCCATACACGCCCAAGAATTCCAGCTTTAACATGCAGAATAACAAGTGCAGCAGCGGATGGTaGGCCGACTCGAAGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSLPYTPKNSSFNMQNNKCSSGW*ADSKLW Trigger: CCACAGCTTCGAGTCGGCCAACCATCCGCTGCTGCA...CTTGTTATTCTGCATGTTAAAGCTGGAATTCTTGGGCGTGTATGGCAGACTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGCTTTCTGGGGGAGAATTAATATGGGGTACTTATCTACCTGACTCTTCATGCAGCAGCGGATGGTaGGCCGACTCGAAGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RELSGGELIWGTYLPDSSCSSGW*ADSKLW Trigger: CCACAGCTTCGAGTCGGCCAACCATCCGCTGCTGCA...TGAAGAGTCAGGTAGATAAGTACCCCATATTAATTCTCCCCCAGAAAGCTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | TGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACAGAGAGGCCGGTGATCTaGGCCAGGTGCCGCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CNSVQGDHGVYHIPFTHTERPVI*ARCRFS Trigger: TGAGAAGCGGCACCTGGCCAAGATCACCGGCCTCTC...TGTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGCTTTCTGGGGGAGAATTAATATGGGGTACTTATCTACCTGACTCTTCACCATCCGATTCGCTTTaGGACTGGGTCTCGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RELSGGELIWGTYLPDSSPSDSL*DWVSEG Trigger: CCCCTCCGAGACCCAGTCCAAAAGCGAATCGGATGG...TGAAGAGTCAGGTAGATAAGTACCCCATATTAATTCTCCCCCAGAAAGCTCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS GCA 90 bp | TTGGCTCCAGAATTAGGGATCTGGACAATGCCATACTGGTTAATTTaGACGGGTGTAGTAAAAGTCACCACAGAGCCACCGTCCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LAPELGIWTMPYWLI*TGVVKVTTEPPSWE Trigger: CTCCCAGGACGGTGGCTCTGTGGTGACTTTTACTACACCCGTGCAAATTAACCAGTATGGCATTGTCCAGATCCCTAATTCTGGAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CCA 90 bp | AACTGGCCGTTGGCTCCAGAATTAGGGATCTGGACAATGCCATACTaGTTAATTTGCACGGGTGTAGTAAAAGTCACCACAGAGCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: NWPLAPELGIWTMPY*LICTGVVKVTTEPP Trigger: CGGTGGCTCTGTGGTGACTTTTACTACACCCGTGCAAATTAACCAGTATGGCATTGTCCAGATCCCTAATTCTGGAGCCAACGGCCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | GTAGAGTTGGCAAGGTCTGCTAGAAACGGTACTTTTCCATTCTGTTTGGGGGAAATCCCATTCTCCTGCTaGATGTCCGCCGCACTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VELARSARNGTFPFCLGEIPFSC*MSAALA Trigger: TGCAAGTGCGGCGGACATCAAGCAGGAGAATGGGAT...TTCCCCCAAACAGAATGGAAAAGTACCGTTTCTAGCAGACCTTGCCAACTCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | ACTGATGGCGGTCGGATGACTTGGGTCCCCAAATATTATCAGAGAGAGAAAGATAGCTCCTTGAGCGCGTaGCGCGACTTCTCCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TDGGRMTWVPKYYQREKDSSLSA*RDFSLK Trigger: TTTCAAGGAGAAGTCGCGCAACGCGCTCAAGGAGCT...ATCTTTCTCTCTCTGATAATATTTGGGGACCCAAGTCATCCGACCGCCATCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | GGTAGTCTGCCATACACGCCCAAGAATTCCAGCTTTAACATGCAGAATAACAAGAGCTCCTTGAGCGCGTaGCGCGACTTCTCCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GSLPYTPKNSSFNMQNNKSSLSA*RDFSLK Trigger: TTTCAAGGAGAAGTCGCGCAACGCGCTCAAGGAGCT...CTTGTTATTCTGCATGTTAAAGCTGGAATTCTTGGGCGTGTATGGCAGACTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | TTGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACCTAGAGAGGCTGAGGTaGGTGACGCCATCAGATGCG | + |
|
Preference number: 5 (lower is better) Translates to: LQFCARRSRGLPYSIHTYLERLR*VTPSDA Trigger: CGCATCTGATGGCGTCACCAACCTCAGCCTCTCTAG...GTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS CCA 90 bp | GATATCTTAGCATTTCCAATTTGTTGCATATATACTGGCTCCACGTaGCTAGAGAGGCTGAGGTTGGTGACGCCATCAGATGCGCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: DILAFPICCIYTGST*LERLRLVTPSDAPE Trigger: TTCAGGCGCATCTGATGGCGTCACCAACCTCAGCCTCTCTAGCCACGTGGAGCCAGTATATATGCAACAAATTGGAAATGCTAAGATATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | TGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACAATCCCATTCTCCTGCTaGATGTCCGCCGCACTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CNSVQGDHGVYHIPFTHTIPFSC*MSAALA Trigger: TGCAAGTGCGGCGGACATCAAGCAGGAGAATGGGAT...TGTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTTCAAAAATACAAACCCACACAGTGGAGACACCAACACACATCCAGAGCAAAGTTCCGAGTGGAGTaGTACCTGATCTGCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CFQKYKPTQWRHQHTSRAKFRVE*YLICRS Trigger: GGAGCGGCAGATCAGGTACAACTCCACTCGGAACTT...TGCTCTGGATGTGTGTTGGTGTCTCCACTGTGTGGGTTTGTATTTTTGAAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | TTGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACTTCAGAAGGCTCTCGTaGCCACGTAGCAGATCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LQFCARRSRGLPYSIHTYFRRLS*PRSRSL Trigger: GAGCGATCTGCTACGTGGCAACGAGAGCCTTCTGAA...GTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | GGTAGTCTGCCATACACGCCCAAGAATTCCAGCTTTAACATGCAGAATAACAAGATCCAACTGGACGGTTaGGAGCTTGGCCAGCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSLPYTPKNSSFNMQNNKIQLDG*ELGQLF Trigger: AAAGAGCTGGCCAAGCTCCAAACCGTCCAGTTGGAT...CTTGTTATTCTGCATGTTAAAGCTGGAATTCTTGGGCGTGTATGGCAGACTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | GTAGAGTTGGCAAGGTCTGCTAGAAACGGTACTTTTCCATTCTGTTTGGGGGAAACATGCCCTGGTGCATaGCTGGTACCAAATGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VELARSARNGTFPFCLGETCPGA*LVPNEA Trigger: AGCTTCATTTGGTACCAGCAATGCACCAGGGCATGT...TTCCCCCAAACAGAATGGAAAAGTACCGTTTCTAGCAGACCTTGCCAACTCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS CCA 90 bp | ATGCTCCCATTAAGGAACTGGCCGTTGGCTCCAGAATTAGGGATCTaGACAATGCCATACTGGTTAATTTGCACGGGTGTAGTAAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: MLPLRNWPLAPELGI*TMPYWLICTGVVKV Trigger: GACTTTTACTACACCCGTGCAAATTAACCAGTATGGCATTGTCCAGATCCCTAATTCTGGAGCCAACGGCCAGTTCCTTAATGGGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | GTAGAGTTGGCAAGGTCTGCTAGAAACGGTACTTTTCCATTCTGTTTGGGGGAAAAATCCTCATGTCCCTaGCTGGATTCATCCTCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VELARSARNGTFPFCLGEKSSCP*LDSSSV Trigger: TACCGAGGATGAATCCAGCAAGGGACATGAGGATTT...TTCCCCCAAACAGAATGGAAAAGTACCGTTTCTAGCAGACCTTGCCAACTCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | TGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACATCGGCAAGGTCAGGGTaGAGCTCAGTGGGATTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CNSVQGDHGVYHIPFTHTSARSG*SSVGLS Trigger: ACTTAATCCCACTGAGCTCAACCCTGACCTTGCCGA...TGTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | GGTAGTCTGCCATACACGCCCAAGAATTCCAGCTTTAACATGCAGAATAACAAGTTGGCCAGCTCTTTTTaGTCCGTTCCCAGGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSLPYTPKNSSFNMQNNKLASSF*SVPRSS Trigger: TGAAGACCTGGGAACGGACAAAAAAGAGCTGGCCAA...CTTGTTATTCTGCATGTTAAAGCTGGAATTCTTGGGCGTGTATGGCAGACTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS CCA 90 bp | TGTCTGTCATGGCTATGCCATTGCCCACAATGTTTGAAGACATTTTaGGTGGGTTCAGTGACACTGTCTGTGTATTTCCCACATTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: CLSWLCHCPQCLKTF*VGSVTLSVYFPHSV Trigger: GACTGAATGTGGGAAATACACAGACAGTGTCACTGAACCCACCCAAAATGTCTTCAAACATTGTGGGCAATGGCATAGCCATGACAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATAAAGTTCCGAGTGGAGTaGTACCTGATCTGCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSYILCRVSLQVRHSKTIKFRVE*YLICRS Trigger: GGAGCGGCAGATCAGGTACAACTCCACTCGGAACTT...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | TTGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACTTGCGCGACTTCTCCTaGAAACAATACACCGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQFCARRSRGLPYSIHTYLRDFS*KQYTVS Trigger: GGAGACGGTGTATTGTTTCAAGGAGAAGTCGCGCAA...GTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTTCAAAAATACAAACCCACACAGTGGAGACACCAACACACATCCAGAGCATTGCGCGACTTCTCCTaGAAACAATACACCGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CFQKYKPTQWRHQHTSRALRDFS*KQYTVS Trigger: GGAGACGGTGTATTGTTTCAAGGAGAAGTCGCGCAA...TGCTCTGGATGTGTGTTGGTGTCTCCACTGTGTGGGTTTGTATTTTTGAAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | ACTGATGGCGGTCGGATGACTTGGGTCCCCAAATATTATCAGAGAGAGAAAGATAGACAGGTGAAGTACTaGCAGGTACTAAGCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TDGGRMTWVPKYYQREKDRQVKY*QVLSFH Trigger: ATGGAAGCTTAGTACCTGCAAGTACTTCACCTGTCT...ATCTTTCTCTCTCTGATAATATTTGGGGACCCAAGTCATCCGACCGCCATCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | CTGATTCCTCATCAGGAATCACTAGAGGATCCTTTGCAGCATCTTCAAGCATTGGTCATGGCTATGCCATaGCCCACAATGTTTGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LIPHQESLEDPLQHLQALVMAMP*PTMFED Trigger: GTCTTCAAACATTGTGGGCAATGGCATAGCCATGAC...CAATGCTTGAAGATGCTGCAAAGGATCCTCTAGTGATTCCTGATGAGGAATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | TGCAATTCTGTGCAAGGAGATCACGGGGTTTACCATATTCCATTCACACATACATTAAGGAACTGGCCGTaGGCTCCAGAATTAGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: CNSVQGDHGVYHIPFTHTLRNWP*APELGI Trigger: GATCCCTAATTCTGGAGCCAACGGCCAGTTCCTTAA...TGTATGTGTGAATGGAATATGGTAAACCCCGTGATCTCCTTGCACAGAATTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS GCA 90 bp | AAAACTCCAGACGAGCTTAGTGATATCTTAGCATTTCCAATTTGTTaGATATATACTGGCTCCACGTGGCTAGAGAGGCTGAGGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KTPDELSDILAFPIC*IYTGSTWLERLRLV Trigger: CACCAACCTCAGCCTCTCTAGCCACGTGGAGCCAGTATATATGCAACAAATTGGAAATGCTAAGATATCACTAAGCTCGTCTGGAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | GGTAGTCTGCCATACACGCCCAAGAATTCCAGCTTTAACATGCAGAATAACAAGAGACAGGTGAAGTACTaGCAGGTACTAAGCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSLPYTPKNSSFNMQNNKRQVKY*QVLSFH Trigger: ATGGAAGCTTAGTACCTGCAAGTACTTCACCTGTCT...CTTGTTATTCTGCATGTTAAAGCTGGAATTCTTGGGCGTGTATGGCAGACTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGCTTTCTGGGGGAGAATTAATATGGGGTACTTATCTACCTGACTCTTCAGCCATACTGGTTAATTaGCACGGGTGTAGTAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RELSGGELIWGTYLPDSSAILVN*HGCSKS Trigger: ACTTTTACTACACCCGTGCAAATTAACCAGTATGGC...TGAAGAGTCAGGTAGATAAGTACCCCATATTAATTCTCCCCCAGAAAGCTCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | GTGGTAAACTTAACCCTGTTTGACGGTACAAAAGAACCATCAACACTGCTGTTGTTTCCGAAGACAGGCTaGCATTTACTTGTGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VVNLTLFDGTKEPSTLLLFPKTG*HLLVHC Trigger: ACAGTGCACAAGTAAATGCAAGCCTGTCTTCGGAAA...CAACAGCAGTGTTGATGGTTCTTTTGTACCGTCAAACAGGGTTAAGTTTACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATAAAATCCTCATGTCCCTaGCTGGATTCATCCTCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VSYILCRVSLQVRHSKTIKSSCP*LDSSSV Trigger: TACCGAGGATGAATCCAGCAAGGGACATGAGGATTT...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCTTGCATTTACTTGTGCACTGTGATTGACAGGCATCAACTGAGAAAAGACCTTAGCATTTCCAATTaGTTGCATATATACTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QACIYLCTVIDRHQLRKDLSISN*LHIYWL Trigger: GAGCCAGTATATATGCAACAAATTGGAAATGCTAAG...GTCTTTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATACATTGCCCACAATGTTaGAAGACATTTTGGGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSYILCRVSLQVRHSKTIHCPQC*KTFWVG Trigger: ACCCACCCAAAATGTCTTCAAACATTGTGGGCAATG...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAGGGAGACATACAAGGTATAAATAAAAACTCACTGTACTTACTCAGATCTCAGGCTTGCATTTACTaGTGCACTGTGATTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LKGDIQGINKNSLYLLRSQACIY*CTVIDR Trigger: CCTGTCAATCACAGTGCACAAGTAAATGCAAGCCTG...AGATCTGAGTAAGTACAGTGAGTTTTTATTTATACCTTGTATGTCTCCCTTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS TCA 90 bp | GTATTTCCCACATTCAGTCCATTAAGGATAACTCCATTGTGTCCCTaGATAAAAGAATTGCCATTAAGGAAGACAGGTGAAGTACTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VFPTFSPLRITPLCP*IKELPLRKTGEVLA Trigger: TGCAAGTACTTCACCTGTCTTCCTTAATGGCAATTCTTTTATTCAGGGACACAATGGAGTTATCCTTAATGGACTGAATGTGGGAAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS-3UTR CAA 90 bp | CTGAAGGGAGACATACAAGGTATAAATAAAAACTCACTGTACTTACTCAGATCTGAACTCTGGAGGACTTaGAATTCTTTCACATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LKGDIQGINKNSLYLLRSELWRT*NSFTSW Trigger: CCAGGATGTGAAAGAATTCAAAGTCCTCCAGAGTTC...AGATCTGAGTAAGTACAGTGAGTTTTTATTTATACCTTGTATGTCTCCCTTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | GTGTCATACATTCTGTGTAGAGTTTCTCTTCAGGTAAGGCACAGTAAAACCATACTTAGCATTTCCAATTaGTTGCATATATACTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VSYILCRVSLQVRHSKTILSISN*LHIYWL Trigger: GAGCCAGTATATATGCAACAAATTGGAAATGCTAAG...TATGGTTTTACTGTGCCTTACCTGAAGAGAAACTCTACACAGAATGTATGACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAGGGAGACATACAAGGTATAAATAAAAACTCACTGTACTTACTCAGATCTGCCATACTGGTTAATTaGCACGGGTGTAGTAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LKGDIQGINKNSLYLLRSAILVN*HGCSKS Trigger: ACTTTTACTACACCCGTGCAAATTAACCAGTATGGC...AGATCTGAGTAAGTACAGTGAGTTTTTATTTATACCTTGTATGTCTCCCTTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS GCA 72 bp | CAGGCGACATGGTCCGGCGAGAAGGCCAGTGGGGGCTaGGCGGCGGCTGCGTGCTGGTGCCTGCCCAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: QATWSGEKASGG*AAAACWCLPRS Trigger: ACTTCTGGGCAGGCACCAGCACGCAGCCGCCGCGCAGCCCCCACTGGCCTTCTCGCCGGACCATGTCGCCTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CCA 72 bp | GAGAAGGCCAGTGGGGGCTGCGCGGCGGCTGCGTGCTaGTGCCTGCCCAGAAGTTCCGAGTGGAGTTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: EKASGGCAAAAC*CLPRSSEWSCT Trigger: GGTACAACTCCACTCGGAACTTCTGGGCAGGCACCAGCACGCAGCCGCCGCGCAGCCCCCACTGGCCTTCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS TCA 72 bp | TGGTGCCTGCCCAGAAGTTCCGAGTGGAGTTGTACCTaGTCTGCCGCTCCCGCCGCCGCTGCCCCTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WCLPRSSEWSCT*SAAPAAAAPSS Trigger: GGAGGAAGGGGCAGCGGCGGCGGGAGCGGCAGATCAGGTACAACTCCACTCGGAACTTCTGGGCAGGCACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CAA 90 bp | CCCTGGTGGAAGGCCACGAGCGCTCGCGCCTTCAGAAGGCTCTCGTaGCCACGTAGCAGATCGCTCTGGGGCAGGGACCAAAGAAACCGG | + |
|
Preference number: 6 (lower is better) Translates to: PWWKATSARAFRRLS*PRSRSLWGRDQRNR Trigger: CCGGTTTCTTTGGTCCCTGCCCCAGAGCGATCTGCTACGTGGCAACGAGAGCCTTCTGAAGGCGCGAGCGCTCGTGGCCTTCCACCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS GCA 72 bp | AGGCCACGAGCGCTCGCGCCTTCAGAAGGCTCTCGTTaGCACGTAGCAGATCGCTCTGGGGCAGGGACCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RPRALAPSEGSR*HVADRSGAGTK Trigger: TTTGGTCCCTGCCCCAGAGCGATCTGCTACGTGGCAACGAGAGCCTTCTGAAGGCGCGAGCGCTCGTGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CAA 72 bp | AAGGCCACGAGCGCTCGCGCCTTCAGAAGGCTCTCGTaGCCACGTAGCAGATCGCTCTGGGGCAGGGACCAA | + |
|
Preference number: 6 (lower is better) Translates to: KATSARAFRRLS*PRSRSLWGRDQ Trigger: TTGGTCCCTGCCCCAGAGCGATCTGCTACGTGGCAACGAGAGCCTTCTGAAGGCGCGAGCGCTCGTGGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CAA 90 bp | TGCGCCTCCTGTCCTTCCGAGGCGCTTTCCATCCCATTCTCCTGCTaGATGTCCGCCGCACTTGCAATCTGCCCGGTGGGGGAGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: CASCPSEALSIPFSC*MSAALAICPVGEEE Trigger: CTCTTCCTCCCCCACCGGGCAGATTGCAAGTGCGGCGGACATCAAGCAGGAGAATGGGATGGAAAGCGCCTCGGAAGGACAGGAGGCGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS CCA 72 bp | TTCAGAAGGCTCTCGTTGCCACGTAGCAGATCGCTCTaGGGCAGGGACCAAAGAAACCGGGCCAGGCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FRRLSLPRSRSL*GRDQRNRARRS Trigger: GGACCGCCTGGCCCGGTTTCTTTGGTCCCTGCCCCAGAGCGATCTGCTACGTGGCAACGAGAGCCTTCTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CAA 72 bp | TGTCCTTCCGAGGCGCTTTCCATCCCATTCTCCTGCTaGATGTCCGCCGCACTTGCAATCTGCCCGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CPSEALSIPFSC*MSAALAICPVG Trigger: CCCCACCGGGCAGATTGCAAGTGCGGCGGACATCAAGCAGGAGAATGGGATGGAAAGCGCCTCGGAAGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043208.8 |
||
| CDS GCA 72 bp | GATGGTTGGCCGACTCGAAGCTGTGGCTCTCGAGGATaGTGTACAACTCAGGGTAGATGCCCTGGTGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: DGWPTRSCGSRG*CTTQGRCPGGR Trigger: CCTTCCACCAGGGCATCTACCCTGAGTTGTACAGCATCCTCGAGAGCCACAGCTTCGAGTCGGCCAACCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS GCA 72 bp | CATGTCCCTTGCTGGATTCATCCTCGGTACTGGGGTTaGCATCCGATTCGCTTTTGGACTGGGTCTCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HVPCWIHPRYWG*HPIRFWTGSRR Trigger: CCTCCGAGACCCAGTCCAAAAGCGAATCGGATGGCAACCCCAGTACCGAGGATGAATCCAGCAAGGGACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS GCA 72 bp | CCACAGAGCCACCGTCCTGGGAGGCCACTGTCTGAATaGCTTCTCTTTTCACTTCAGTGCAGGGTATCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PQSHRPGRPLSE*LLFSLQCRVSA Trigger: GGCTGATACCCTGCACTGAAGTGAAAAGAGAAGGCATTCAGACAGTGGCCTCCCAGGACGGTGGCTCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CAA 72 bp | TCATGTCCCTTGCTGGATTCATCCTCGGTACTGGGGTaGCCATCCGATTCGCTTTTGGACTGGGTCTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SCPLLDSSSVLG*PSDSLLDWVSE Trigger: CTCCGAGACCCAGTCCAAAAGCGAATCGGATGGCAACCCCAGTACCGAGGATGAATCCAGCAAGGGACATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS TCA 72 bp | AGAGAGGCTGAGGTTGGTGACGCCATCAGATGCGCCTaGAAGTGGATGAGGAGACAAATCCTCATGTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: REAEVGDAIRCA*KWMRRQILMSL Trigger: AAGGGACATGAGGATTTGTCTCCTCATCCACTTTCAGGCGCATCTGATGGCGTCACCAACCTCAGCCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS GCA 72 bp | CTGAAAGTGGATGAGGAGACAAATCCTCATGTCCCTTaGTGGATTCATCCTCGGTACTGGGGTTGCCATCCG | + |
|
Preference number: 6 (lower is better) Translates to: LKVDEETNPHVP*WIHPRYWGCHP Trigger: CGGATGGCAACCCCAGTACCGAGGATGAATCCAGCAAGGGACATGAGGATTTGTCTCCTCATCCACTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CCA 72 bp | AATCCTCATGTCCCTTGCTGGATTCATCCTCGGTACTaGGGTTGCCATCCGATTCGCTTTTGGACTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: NPHVPCWIHPRY*GCHPIRFWTGS Trigger: AGACCCAGTCCAAAAGCGAATCGGATGGCAACCCCAGTACCGAGGATGAATCCAGCAAGGGACATGAGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CAA 90 bp | GTTGGCTCCAGAATTAGGGATCTGGACAATGCCATACTGGTTAATTaGCACGGGTGTAGTAAAAGTCACCACAGAGCCACCGTCCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VGSRIRDLDNAILVN*HGCSKSHHRATVLG Trigger: TCCCAGGACGGTGGCTCTGTGGTGACTTTTACTACACCCGTGCAAATTAACCAGTATGGCATTGTCCAGATCCCTAATTCTGGAGCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CCA 72 bp | AAAGTGGATGAGGAGACAAATCCTCATGTCCCTTGCTaGATTCATCCTCGGTACTGGGGTTGCCATCCGATT | + |
|
Preference number: 6 (lower is better) Translates to: KVDEETNPHVPC*IHPRYWGCHPI Trigger: AATCGGATGGCAACCCCAGTACCGAGGATGAATCCAGCAAGGGACATGAGGATTTGTCTCCTCATCCACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CCA 72 bp | TGCAGTGGAGAGAATCCAATGCTCCCATTAAGGAACTaGCCGTTGGCTCCAGAATTAGGGATCTGGACAATG | + |
|
Preference number: 6 (lower is better) Translates to: CSGENPMLPLRN*PLAPELGIWTM Trigger: CATTGTCCAGATCCCTAATTCTGGAGCCAACGGCCAGTTCCTTAATGGGAGCATTGGATTCTCTCCACTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CAA 72 bp | GGAGAGAATCCAATGCTCCCATTAAGGAACTGGCCGTaGGCTCCAGAATTAGGGATCTGGACAATGCCATAC | + |
|
Preference number: 6 (lower is better) Translates to: GENPMLPLRNWP*APELGIWTMPY Trigger: GTATGGCATTGTCCAGATCCCTAATTCTGGAGCCAACGGCCAGTTCCTTAATGGGAGCATTGGATTCTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CAA 90 bp | ACATCCTGGGAGGTAGATCCCAGGATGTCTGTCATGGCTATGCCATaGCCCACAATGTTTGAAGACATTTTGGGTGGGTTCAGTGACACT | + |
|
Preference number: 6 (lower is better) Translates to: TSWEVDPRMSVMAMP*PTMFEDILGGFSDT Trigger: AGTGTCACTGAACCCACCCAAAATGTCTTCAAACATTGTGGGCAATGGCATAGCCATGACAGACATCCTGGGATCTACCTCCCAGGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CCA 72 bp | GCATTTCCAATTTGTTGCATATATACTGGCTCCACGTaGCTAGAGAGGCTGAGGTTGGTGACGCCATCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: AFPICCIYTGST*LERLRLVTPSD Trigger: ATCTGATGGCGTCACCAACCTCAGCCTCTCTAGCCACGTGGAGCCAGTATATATGCAACAAATTGGAAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CCA 72 bp | GCAGAACTCTGGAGGACTTTGAATTCTTTCACATCCTaGGAGGTAGATCCCAGGATGTCTGTCATGGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: AELWRTLNSFTS*EVDPRMSVMAM Trigger: CATAGCCATGACAGACATCCTGGGATCTACCTCCCAGGATGTGAAAGAATTCAAAGTCCTCCAGAGTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CAA 72 bp | GAGGTAGATCCCAGGATGTCTGTCATGGCTATGCCATaGCCCACAATGTTTGAAGACATTTTGGGTGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: EVDPRMSVMAMP*PTMFEDILGGF Trigger: GAACCCACCCAAAATGTCTTCAAACATTGTGGGCAATGGCATAGCCATGACAGACATCCTGGGATCTACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CAA 90 bp | AGCTGCAGTGGAGAGAATCCAATGCTCCCATTAAGGAACTGGCCGTaGGCTCCAGAATTAGGGATCTGGACAATGCCATACTGGTTAATT | + |
|
Preference number: 6 (lower is better) Translates to: SCSGENPMLPLRNWP*APELGIWTMPYWLI Trigger: AATTAACCAGTATGGCATTGTCCAGATCCCTAATTCTGGAGCCAACGGCCAGTTCCTTAATGGGAGCATTGGATTCTCTCCACTGCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS TCA 72 bp | AACCAACACATGCCCTGGTGCATTGCTGGTACCAAATaGAGCTTTTACCTTGTGAAGCTGCTACTGAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: NQHMPWCIAGTK*SFYLVKLLLRQ Trigger: CTGTCTCAGTAGCAGCTTCACAAGGTAAAAGCTTCATTTGGTACCAGCAATGCACCAGGGCATGTGTTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175693.3 |
||
| CDS GCA 72 bp | GAATTAGGGATCTGGACAATGCCATACTGGTTAATTTaGACGGGTGTAGTAAAAGTCACCACAGAGCCACCG | + |
|
Preference number: 6 (lower is better) Translates to: ELGIWTMPYWLI*TGVVKVTTEPP Trigger: CGGTGGCTCTGTGGTGACTTTTACTACACCCGTGCAAATTAACCAGTATGGCATTGTCCAGATCCCTAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CCA 72 bp | TTAAGGAACTGGCCGTTGGCTCCAGAATTAGGGATCTaGACAATGCCATACTGGTTAATTTGCACGGGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LRNWPLAPELGI*TMPYWLICTGV Trigger: TACACCCGTGCAAATTAACCAGTATGGCATTGTCCAGATCCCTAATTCTGGAGCCAACGGCCAGTTCCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CAA 72 bp | GGATGTCTGTCATGGCTATGCCATTGCCCACAATGTTaGAAGACATTTTGGGTGGGTTCAGTGACACTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GCLSWLCHCPQC*KTFWVGSVTLS Trigger: AGACAGTGTCACTGAACCCACCCAAAATGTCTTCAAACATTGTGGGCAATGGCATAGCCATGACAGACATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CCA 72 bp | TGGCTATGCCATTGCCCACAATGTTTGAAGACATTTTaGGTGGGTTCAGTGACACTGTCTGTGTATTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WLCHCPQCLKTF*VGSVTLSVYFP Trigger: TGGGAAATACACAGACAGTGTCACTGAACCCACCCAAAATGTCTTCAAACATTGTGGGCAATGGCATAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CAA 72 bp | ATGGCTATGCCATTGCCCACAATGTTTGAAGACATTTaGGGTGGGTTCAGTGACACTGTCTGTGTATTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: MAMPLPTMFEDI*GGFSDTVCVFP Trigger: GGGAAATACACAGACAGTGTCACTGAACCCACCCAAAATGTCTTCAAACATTGTGGGCAATGGCATAGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CAA 72 bp | AGAATTAGGGATCTGGACAATGCCATACTGGTTAATTaGCACGGGTGTAGTAAAAGTCACCACAGAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: RIRDLDNAILVN*HGCSKSHHRAT Trigger: GGTGGCTCTGTGGTGACTTTTACTACACCCGTGCAAATTAACCAGTATGGCATTGTCCAGATCCCTAATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS CAA 90 bp | ATGTCTGTCATGGCTATGCCATTGCCCACAATGTTTGAAGACATTTaGGGTGGGTTCAGTGACACTGTCTGTGTATTTCCCACATTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: MSVMAMPLPTMFEDI*GGFSDTVCVFPTFS Trigger: ACTGAATGTGGGAAATACACAGACAGTGTCACTGAACCCACCCAAAATGTCTTCAAACATTGTGGGCAATGGCATAGCCATGACAGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||
| CDS TCA 72 bp | ACATTCAGTCCATTAAGGATAACTCCATTGTGTCCCTaGATAAAAGAATTGCCATTAAGGAAGACAGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TFSPLRITPLCP*IKELPLRKTGE Trigger: TTCACCTGTCTTCCTTAATGGCAATTCTTTTATTCAGGGACACAATGGAGTTATCCTTAATGGACTGAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043208.8 ENSMUST00000175693.3 |
||