Pregenerated sensors for SIX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038805Ensembl transcript IDs: ENSMUST00000162695.3, ENSMUST00000175898.4, ENSMUST00000176081.3
Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAAGTGGTCTCAACCCTCTGATGAGGAGTTGCGGTGTGGCCCTGTaGCTCAGAGGCCCTCGGAGGCCCACACTCTCAGCTCCAGGGGCA | + |
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Preference number: 1 (lower is better) Translates to: RSGLNPLMRSCGVAL*LRGPRRPTLSAPGA Trigger: TGCCCCTGGAGCTGAGAGTGTGGGCCTCCGAGGGCCTCTGAGTCACAGGGCCACACCGCAACTCCTCATCAGAGGGTTGAGACCACTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR GCA 90 bp | GTGGGAGGGAGAGCAACCGCATTTCAGGCCCTGAAGTCAGAAAACTaGCTCCTTCTCCCACCCACTCCCGACCCTTGTTCATCTGGGCCC | + |
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Preference number: 1 (lower is better) Translates to: VGGRATAFQALKSEN*LLLPPTPDPCSSGP Trigger: GGGCCCAGATGAACAAGGGTCGGGAGTGGGTGGGAGAAGGAGGCAGTTTTCTGACTTCAGGGCCTGAAATGCGGTTGCTCTCCCTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR GCA 90 bp | CAGGCTCACATGCGTGCCTCCAGTCCCACTGTAGATCAGCATCCCTaGCTGGCACCGTGGCGGCTTCTGTGCCATTTCTCTGAAGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: QAHMRASSPTVDQHP*LAPWRLLCHFSEVS Trigger: ACTGACTTCAGAGAAATGGCACAGAAGCCGCCACGGTGCCAGGCAGGGATGCTGATCTACAGTGGGACTGGAGGCACGCATGTGAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR GCA 90 bp | TGTGACAAACTAGCAGTGGGCTGGCAGAGGCTGGAGTCACTCCCCTaGCTCCACAGTCTCTCCCACTTGACCTGTCTAGGTCTATGCTGG | + |
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Preference number: 1 (lower is better) Translates to: CDKLAVGWQRLESLP*LHSLSHLTCLGLCW Trigger: CCAGCATAGACCTAGACAGGTCAAGTGGGAGAGACTGTGGAGGCAGGGGAGTGACTCCAGCCTCTGCCAGCCCACTGCTAGTTTGTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR GCA 90 bp | CTAGAAGGCTACCAAACATTCCAAGGGCTCACAAGCGCCGCGAGATaGAGCAAATCCAGGGTACAGCACTCCGGGGAGGATTCAGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: LEGYQTFQGLTSAAR*SKSRVQHSGEDSGL Trigger: CAGGCCTGAATCCTCCCCGGAGTGCTGTACCCTGGATTTGCTGCATCTCGCGGCGCTTGTGAGCCCTTGGAATGTTTGGTAGCCTTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR TCA 90 bp | AAAGGTCAGGGTAGTGCGCAAAGGAAGACAAGGAGTACAAGAGTCTaGGACACCCCTTGCCCTGGGGGAACTAGAGCATGGCCACTGCCC | + |
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Preference number: 1 (lower is better) Translates to: KGQGSAQRKTRSTRV*DTPCPGGTRAWPLP Trigger: GGGCAGTGGCCATGCTCTAGTTCCCCCAGGGCAAGGGGTGTCTCAGACTCTTGTACTCCTTGTCTTCCTTTGCGCACTACCCTGACCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR GCA 90 bp | GAGAGCAAGCGGGAAGCTGGGCTGTTACAGCACCCGGGAGCTGTTTaGCAGGGCGGACACAAACACCAGTCTCTGGGAGTGATAAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: ESKREAGLLQHPGAV*QGGHKHQSLGVIRK Trigger: TTTTCTTATCACTCCCAGAGACTGGTGTTTGTGTCCGCCCTGGCAAACAGCTCCCGGGTGCTGTAACAGCCCAGCTTCCCGCTTGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR GCA 90 bp | CTCTCCCACTTGACCTGTCTAGGTCTATGCTGGTCTTCCCAGTCCTaGGTTGGAACCAGCTCTGGAGTCAACATTGGGGTTACTGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: LSHLTCLGLCWSSQS*VGTSSGVNIGVTGP Trigger: GGGACCAGTAACCCCAATGTTGACTCCAGAGCTGGTTCCAACGCAGGACTGGGAAGACCAGCATAGACCTAGACAGGTCAAGTGGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR CCA 90 bp | AATGCATTAGAAGGGGAGGCAAGAAGCCCCCAGTCCACAGAGAAGTaGTCTCAACCCTCTGATGAGGAGTTGCGGTGTGGCCCTGTGACT | + |
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Preference number: 1 (lower is better) Translates to: NALEGEARSPQSTEK*SQPSDEELRCGPVT Trigger: AGTCACAGGGCCACACCGCAACTCCTCATCAGAGGGTTGAGACCACTTCTCTGTGGACTGGGGGCTTCTTGCCTCCCCTTCTAATGCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR CCA 90 bp | TCAGAGGTGGCAGCCAGTACTCCAGGTGACAGCCACACAATGGTCTaGGCAGTACAGAAAGGTCAGGGTAGTGCGCAAAGGAAGACAAGG | + |
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Preference number: 1 (lower is better) Translates to: SEVAASTPGDSHTMV*AVQKGQGSAQRKTR Trigger: CCTTGTCTTCCTTTGCGCACTACCCTGACCTTTCTGTACTGCCCAGACCATTGTGTGGCTGTCACCTGGAGTACTGGCTGCCACCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR CCA 90 bp | AAGCCTCAGAGGTGGCAGCCAGTACTCCAGGTGACAGCCACACAATaGTCTGGGCAGTACAGAAAGGTCAGGGTAGTGCGCAAAGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: KPQRWQPVLQVTATQ*SGQYRKVRVVRKGR Trigger: TCTTCCTTTGCGCACTACCCTGACCTTTCTGTACTGCCCAGACCATTGTGTGGCTGTCACCTGGAGTACTGGCTGCCACCTCTGAGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR CCA 90 bp | CTTTTGAAGAAGTACATAGGTGTCTGTGACAAACTAGCAGTGGGCTaGCAGAGGCTGGAGTCACTCCCCTGCCTCCACAGTCTCTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: LLKKYIGVCDKLAVG*QRLESLPCLHSLSH Trigger: GTGGGAGAGACTGTGGAGGCAGGGGAGTGACTCCAGCCTCTGCCAGCCCACTGCTAGTTTGTCACAGACACCTATGTACTTCTTCAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR TCA 90 bp | TCAGCATCCCTGCCTGGCACCGTGGCGGCTTCTGTGCCATTTCTCTaGAGTCAGTTGTGTATCTCACCAGGGATAATCAACTTCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: SASLPGTVAASVPFL*SQLCISPGIINFWA Trigger: TGCCCAGAAGTTGATTATCCCTGGTGAGATACACAACTGACTTCAGAGAAATGGCACAGAAGCCGCCACGGTGCCAGGCAGGGATGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR TCA 90 bp | GCCAGGCAGTTCCATTCCACTTTTGAAGAAGTACATAGGTGTCTGTaGCAAACTAGCAGTGGGCTGGCAGAGGCTGGAGTCACTCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: ARQFHSTFEEVHRCL*QTSSGLAEAGVTPL Trigger: CAGGGGAGTGACTCCAGCCTCTGCCAGCCCACTGCTAGTTTGTCACAGACACCTATGTACTTCTTCAAAAGTGGAATGGAACTGCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR CCA 90 bp | TCCCAGATACAAATAAATCGTCATGCAGGTGGGGTGCCGGGTCCGTaGGAACCAAAAGGAGAAGCCGTGCTTGTCCTAGAAAGTATACAA | + |
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Preference number: 1 (lower is better) Translates to: SQIQINRHAGGVPGP*EPKGEAVLVLESIQ Trigger: TTGTATACTTTCTAGGACAAGCACGGCTTCTCCTTTTGGTTCCCACGGACCCGGCACCCCACCTGCATGACGATTTATTTGTATCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| 3UTR GCA 90 bp | GAAGCCGTGCTTGTCCTAGAAAGTATACAATTGTCACCTCTTTTATaGTTTCTGCCCGCAACATCAGCGTTTGTGACTGTCTGTTGGCGT | + |
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Preference number: 1 (lower is better) Translates to: EAVLVLESIQLSPLL*FLPATSAFVTVCWR Trigger: ACGCCAACAGACAGTCACAAACGCTGATGTTGCGGGCAGAAAGCATAAAAGAGGTGACAATTGTATACTTTCTAGGACAAGCACGGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| 3UTR GCA 90 bp | GCATGTGTGTGCTATATTTATACAGAAATGGCTAGTAGCAAGGTATaGATACAACATGTGGCTAGGTATATTTGTATAAGTGTGTATGTG | + |
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Preference number: 1 (lower is better) Translates to: ACVCYIYTEMASSKV*IQHVARYICISVYV Trigger: CACATACACACTTATACAAATATACCTAGCCACATGTTGTATGCATACCTTGCTACTAGCCATTTCTGTATAAATATAGCACACACATGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR-3UTR CCA 90 bp | CTCGGGAGTTGTGCGGCCACAGCCGGCCAGGAAAGCTTGGGGCCAGCAGAGGAAGAGCAAGCGGGAAGCTaGGCTGTTACAGCACCCGGG | + |
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Preference number: 2 (lower is better) Translates to: LGSCAATAGQESLGPAEEEQAGS*AVTAPG Trigger: CCCGGGTGCTGTAACAGCCCAGCTTCCCGCTTGCTC...TTCCTCTGCTGGCCCCAAGCTTTCCTGGCCGGCTGTGGCCGCACAACTCCCGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCCCGGCTCTGGCTCTGGCGGCCAGCGAGTTAGAGAGAGCAAGCGGGAACAACATCAGCGTTTGTaGCTGTCTGTTGGCGTCGCG | + |
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Preference number: 2 (lower is better) Translates to: PLPGSGSGGQRVRESKREQHQRL*LSVGVA Trigger: CGCGACGCCAACAGACAGTCACAAACGCTGATGTTG...TTCCCGCTTGCTCTCTCTAACTCGCTGGCCGCCAGAGCCAGAGCCGGGGAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR-3UTR GCA 90 bp | CTGAAATCACCTCTTTGGCCCCTTCTCAAGCGCGCAGGCCGCCTTGGCCCAGAGGTCATGCAGGTGGGGTaGCGGGTCCGTGGGAACCAA | + |
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Preference number: 2 (lower is better) Translates to: LKSPLWPLLKRAGRLGPEVMQVG*RVRGNQ Trigger: TTGGTTCCCACGGACCCGGCACCCCACCTGCATGAC...CTCTGGGCCAAGGCGGCCTGCGCGCTTGAGAAGGGGCCAAAGAGGTGATTTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGGGAACTAGAGCATGGCCACTGCCCCACAGGCCTGATACTAGGCTACAGGCTGACCGGGAGCTCTaGGGTGGGGCTAGGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PGGTRAWPLPHRPDTRLQADREL*GGARKG Trigger: TCCCTTCCTAGCCCCACCCCAGAGCTCCCGGTCAGC...CTGTAGCCTAGTATCAGGCCTGTGGGGCAGTGGCCATGCTCTAGTTCCCCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGGGAACTAGAGCATGGCCACTGCCCCACAGGCCTGATACTAGGCTACAGTGGGCTGGCAGAGGCTaGAGTCACTCCCCTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: PGGTRAWPLPHRPDTRLQWAGRG*SHSPAS Trigger: GGAGGCAGGGGAGTGACTCCAGCCTCTGCCAGCCCA...CTGTAGCCTAGTATCAGGCCTGTGGGGCAGTGGCCATGCTCTAGTTCCCCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR-3UTR CCA 90 bp | AGCCGGCCAGGAAAGCTTGGGGCCAGCAGAGGAACGTGGTCAGCAAGGGGTAGTGGGGTGCCGGGTCCGTaGGAACCAAAAGGAGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: SRPGKLGASRGTWSARGSGVPGP*EPKGEA Trigger: GGCTTCTCCTTTTGGTTCCCACGGACCCGGCACCCC...ACTACCCCTTGCTGACCACGTTCCTCTGCTGGCCCCAAGCTTTCCTGGCCGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR-3UTR CCA 90 bp | AGTTGTAACCCCCTACCCTCATGCCCCCTTTGCCTTTCCCTCGGGATCCTGTTTCCCCCTCCCCGGCTCTaGCTCTGGCGGCCAGCGAGT | + |
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Preference number: 2 (lower is better) Translates to: SCNPLPSCPLCLSLGILFPPPRL*LWRPAS Trigger: ACTCGCTGGCCGCCAGAGCCAGAGCCGGGGAGGGGG...AAACAGGATCCCGAGGGAAAGGCAAAGGGGGCATGAGGGTAGGGGGTTACAACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR-3UTR TCA 90 bp | CTCGGGAGTTGTGCGGCCACAGCCGGCCAGGAAAGCTTGGGGCCAGCAGAGGAACCGCATTTCAGGCCCTaGAGTCAGAAAACTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LGSCAATAGQESLGPAEEPHFRP*SQKTAS Trigger: GGAGGCAGTTTTCTGACTTCAGGGCCTGAAATGCGG...TTCCTCTGCTGGCCCCAAGCTTTCCTGGCCGGCTGTGGCCGCACAACTCCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR-3UTR CCA 90 bp | ACTAGCAGTGGGCTGGCAGAGGCTGGAGTCACTCCCCTGCCTCCACAGTCTCTCCTGGGCAGCCAATTTTaGCAGGATTCAGAGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TSSGLAEAGVTPLPPQSLLGSQF*QDSEGR Trigger: CCTGCCCTCTGAATCCTGCCAAAATTGGCTGCCCAG...GAGAGACTGTGGAGGCAGGGGAGTGACTCCAGCCTCTGCCAGCCCACTGCTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR-3UTR GCA 90 bp | CTGAAATCACCTCTTTGGCCCCTTCTCAAGCGCGCAGGCCGCCTTGGCCCAGAGACAAATAAATCGTCATaGAGGTGGGGTGCCGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: LKSPLWPLLKRAGRLGPETNKSS*RWGAGS Trigger: GGACCCGGCACCCCACCTGCATGACGATTTATTTGT...CTCTGGGCCAAGGCGGCCTGCGCGCTTGAGAAGGGGCCAAAGAGGTGATTTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR-3UTR CCA 90 bp | GTAACCCCCTACCCTCATGCCCCCTTTGCCTTTCCCTCGGGATCCTGTTTGGGCTTTGTGACTGTCTGTTaGCGTCGCGGTCCTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: VTPYPHAPFAFPSGSCLGFVTVC*RRGPLG Trigger: CCCCAAAGGACCGCGACGCCAACAGACAGTCACAAA...GCCCAAACAGGATCCCGAGGGAAAGGCAAAGGGGGCATGAGGGTAGGGGGTTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR-3UTR TCA 90 bp | CCTCGGGAGTTGTGCGGCCACAGCCGGCCAGGAAAGCTTGGGGCCAGCAGAGGATGGTGGTGGGGTTGTTaGTGGTTTGAGGTTAATTTA | + |
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Preference number: 2 (lower is better) Translates to: PRELCGHSRPGKLGASRGWWWGC*WFEVNL Trigger: TAAATTAACCTCAAACCATCAACAACCCCACCACCA...TCCTCTGCTGGCCCCAAGCTTTCCTGGCCGGCTGTGGCCGCACAACTCCCGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR CAA 90 bp | AGAGAGCAAGCGGGAAGCTGGGCTGTTACAGCACCCGGGAGCTGTTaGCCAGGGCGGACACAAACACCAGTCTCTGGGAGTGATAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: REQAGSWAVTAPGSC*PGRTQTPVSGSDKK Trigger: TTTCTTATCACTCCCAGAGACTGGTGTTTGTGTCCGCCCTGGCAAACAGCTCCCGGGTGCTGTAACAGCCCAGCTTCCCGCTTGCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR-3UTR TCA 90 bp | CTGTTGGCGTCGCGGTCCTTTGGGGTGGCCGTGGTAGTAGGTGGTGGTGGGGTTTCTGTCTGTGTATCCTaGTTTCGGTTTGTTCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: LLASRSFGVAVVVGGGGVSVCVS*FRFVLG Trigger: CCCTAGAACAAACCGAAATCAGGATACACAGACAGA...AACCCCACCACCACCTACTACCACGGCCACCCCAAAGGACCGCGACGCCAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| 3UTR-3UTR GCA 90 bp | GGGCTCACAAGCGCCGCGAGATGCAGCAAATCCAGGGTACAGCACTCCGGGGAGCTCTTTTATGCTTTCTaGCCGCAACATCAGCGTTTG | + |
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Preference number: 2 (lower is better) Translates to: GLTSAARCSKSRVQHSGELFYAF*PQHQRL Trigger: CAAACGCTGATGTTGCGGGCAGAAAGCATAAAAGAG...CTCCCCGGAGTGCTGTACCCTGGATTTGCTGCATCTCGCGGCGCTTGTGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCACAGCCGGCCAGGAAAGCTTGGGGCCAGCAGAGGAACGTGGTCAGCAAGGTTGTCACCTCTTTTATaGTTTCTGCCCGCAACATCA | + |
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Preference number: 2 (lower is better) Translates to: GHSRPGKLGASRGTWSARLSPLL*FLPATS Trigger: TGATGTTGCGGGCAGAAAGCATAAAAGAGGTGACAA...CCTTGCTGACCACGTTCCTCTGCTGGCCCCAAGCTTTCCTGGCCGGCTGTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR-3UTR GCA 90 bp | AGAATACTACGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCGTCATGCAGGTGGGGTaGCGGGTCCGTGGGAACCAA | + |
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Preference number: 2 (lower is better) Translates to: RILRSHSLLSLATGSLSLVMQVG*RVRGNQ Trigger: TTGGTTCCCACGGACCCGGCACCCCACCTGCATGAC...GAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCGTAGTATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| 3UTR CAA 90 bp | TCTTTTATGCTTTCTGCCCGCAACATCAGCGTTTGTGACTGTCTGTaGGCGTCGCGGTCCTTTGGGGTGGCCGTGGTAGTAGGTGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: SFMLSARNISVCDCL*ASRSFGVAVVVGGG Trigger: ACCACCACCTACTACCACGGCCACCCCAAAGGACCGCGACGCCAACAGACAGTCACAAACGCTGATGTTGCGGGCAGAAAGCATAAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCCCGGCTCTGGCTCTGGCGGCCAGCGAGTTAGAGAGAGCAAGCGGGAATGCTTACGAAGAAAATaGTTGTCGGCTGAACAAAAA | + |
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Preference number: 2 (lower is better) Translates to: PLPGSGSGGQRVRESKRECLRRK*LSAEQK Trigger: TTTTTGTTCAGCCGACAATCATTTTCTTCGTAAGCA...TTCCCGCTTGCTCTCTCTAACTCGCTGGCCGCCAGAGCCAGAGCCGGGGAGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR-3UTR GCA 90 bp | GTCATGCAGGTGGGGTGCCGGGTCCGTGGGAACCAAAAGGAGAAGCCGTGCTTGCTCTTTTATGCTTTCTaGCCGCAACATCAGCGTTTG | + |
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Preference number: 2 (lower is better) Translates to: VMQVGCRVRGNQKEKPCLLFYAF*PQHQRL Trigger: CAAACGCTGATGTTGCGGGCAGAAAGCATAAAAGAG...CAAGCACGGCTTCTCCTTTTGGTTCCCACGGACCCGGCACCCCACCTGCATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| 3UTR-3UTR GCA 90 bp | TCCTGCCGAGTCCTGCCTGACACTGCAGAGCTCAATCAGCCACTGCATGAATACCCGTGGCGGCTTCTGTaGCATTTCTCTGAAGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: SCRVLPDTAELNQPLHEYPWRLL*HFSEVS Trigger: ACTGACTTCAGAGAAATGGCACAGAAGCCGCCACGG...GTATTCATGCAGTGGCTGATTGAGCTCTGCAGTGTCAGGCAGGACTCGGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR-3UTR GCA 90 bp | CTCGGGAGTTGTGCGGCCACAGCCGGCCAGGAAAGCTTGGGGCCAGCAGAGGAAGAAGGTAGAAACATTTaGTATTTCTCTCGAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: LGSCAATAGQESLGPAEEEGRNI*YFSRGV Trigger: AACTCCTCGAGAGAAATAGCAAATGTTTCTACCTTC...TTCCTCTGCTGGCCCCAAGCTTTCCTGGCCGGCTGTGGCCGCACAACTCCCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR-3UTR TCA 90 bp | AGAATACTACGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCCAACATCAGCGTTTGTaGCTGTCTGTTGGCGTCGCG | + |
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Preference number: 2 (lower is better) Translates to: RILRSHSLLSLATGSLSLQHQRL*LSVGVA Trigger: CGCGACGCCAACAGACAGTCACAAACGCTGATGTTG...GAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCGTAGTATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| 3UTR-3UTR GCA 90 bp | GCCACACAATGGTCTGGGCAGTACAGAAAGGTCAGGGTAGTGCGCAAAGGAAGAAGGGTTAGTGACCCCTaGAAGGCACTGGGTTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: ATQWSGQYRKVRVVRKGRRVSDP*KALGSK Trigger: TTTTGAACCCAGTGCCTTGCAGGGGTCACTAACCCT...TCTTCCTTTGCGCACTACCCTGACCTTTCTGTACTGCCCAGACCATTGTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGGGTGCCGGGTCCGTGGGAACCAAAAGGAGAAGCCGTGCTTGTCCTAGAAAATATATTTTTGGCTaGGGTGGGAGTGTGTATGGA | + |
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Preference number: 2 (lower is better) Translates to: RWGAGSVGTKRRSRACPRKYIFG*GGSVYG Trigger: TCCATACACACTCCCACCCCAGCCAAAAATATATTT...TCTAGGACAAGCACGGCTTCTCCTTTTGGTTCCCACGGACCCGGCACCCCACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| 3UTR CAA 90 bp | CCTGAAGTCAGAAAACTGCCTCCTTCTCCCACCCACTCCCGACCCTaGTTCATCTGGGCCCTAGTTAACCACTTTACATCTCCTCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: PEVRKLPPSPTHSRP*FIWALVNHFTSPPK Trigger: TTTTGGAGGAGATGTAAAGTGGTTAACTAGGGCCCAGATGAACAAGGGTCGGGAGTGGGTGGGAGAAGGAGGCAGTTTTCTGACTTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| 3UTR-3UTR TCA 90 bp | CCGTGGCGGCTTCTGTGCCATTTCTCTGAAGTCAGTTGTGTATCTCACCAGGGAACCATTGTTTGCCTCTaGGGGATGCAGAGAAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: PWRLLCHFSEVSCVSHQGTIVCL*GMQRRE Trigger: TTCTCTTCTCTGCATCCCTCAGAGGCAAACAATGGT...TCCCTGGTGAGATACACAACTGACTTCAGAGAAATGGCACAGAAGCCGCCACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| 3UTR-3UTR TCA 90 bp | ATGCTTTCTGCCCGCAACATCAGCGTTTGTGACTGTCTGTTGGCGTCGCGGTCCTGGTGGTGGGGTTGTTaGTGGTTTGAGGTTAATTTA | + |
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Preference number: 2 (lower is better) Translates to: MLSARNISVCDCLLASRSWWWGC*WFEVNL Trigger: TAAATTAACCTCAAACCATCAACAACCCCACCACCA...GGACCGCGACGCCAACAGACAGTCACAAACGCTGATGTTGCGGGCAGAAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| 3UTR-3UTR GCA 90 bp | TCCTGCCGAGTCCTGCCTGACACTGCAGAGCTCAATCAGCCACTGCATGAATACTCGAATGGAAAGTTGTaGTCAGCTGACCGGAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SCRVLPDTAELNQPLHEYSNGKL*SADRRN Trigger: ATTTCTCCGGTCAGCTGAGCACAACTTTCCATTCGA...GTATTCATGCAGTGGCTGATTGAGCTCTGCAGTGTCAGGCAGGACTCGGCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGCCGAGTCCTGCCTGACACTGCAGAGCTCAATCAGCCACTGCATGAATACATAAAGTCCTGGCACTaGGAAAGCTCCCAACCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: SCRVLPDTAELNQPLHEYIKSWH*ESSQPN Trigger: ATTAGGTTGGGAGCTTTCCCAGTGCCAGGACTTTAT...GTATTCATGCAGTGGCTGATTGAGCTCTGCAGTGTCAGGCAGGACTCGGCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR-3UTR TCA 90 bp | ACTAGTTGTAACCCCCTACCCTCATGCCCCCTTTGCCTTTCCCTCGGGATCCTGAAAATGATTGTCGGCTaGACAAAAACAGAGGATTGC | + |
|
Preference number: 2 (lower is better) Translates to: TSCNPLPSCPLCLSLGILKMIVG*TKTEDC Trigger: GCAATCCTCTGTTTTTGTTCAGCCGACAATCATTTT...CAGGATCCCGAGGGAAAGGCAAAGGGGGCATGAGGGTAGGGGGTTACAACTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAATACTACGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCTCTGTCTGTGTATCCTaGTTTCGGTTTGTTCTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: RILRSHSLLSLATGSLSLSVCVS*FRFVLG Trigger: CCCTAGAACAAACCGAAATCAGGATACACAGACAGA...GAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCGTAGTATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| 3UTR-3UTR CCA 90 bp | CGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCTTTCTCTCTAAATATATTTTTGGCTaGGGTGGGAGTGTGTATGGA | + |
|
Preference number: 2 (lower is better) Translates to: RSHSLLSLATGSLSLFLSKYIFG*GGSVYG Trigger: TCCATACACACTCCCACCCCAGCCAAAAATATATTT...AGAGAGAAAGAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGCATGTGTGTGCTATATTTATACAGAAATGGCTAGTAAGGAGTACAAGAGTCTaGGACACCCCTTGCCCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: CVCVCVHVCAIFIQKWLVRSTRV*DTPCPG Trigger: CCCAGGGCAAGGGGTGTCTCAGACTCTTGTACTCCT...TACTAGCCATTTCTGTATAAATATAGCACACACATGCACACACACACACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR-3UTR GCA 90 bp | CGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCTTTCTCTCTGAAGGTAGAAACATTTaGTATTTCTCTCGAGGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: RSHSLLSLATGSLSLFLSEGRNI*YFSRGV Trigger: AACTCCTCGAGAGAAATAGCAAATGTTTCTACCTTC...AGAGAGAAAGAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAATACTACGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCTGCTTACGAAGAAAATaGTTGTCGGCTGAACAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: RILRSHSLLSLATGSLSLCLRRK*LSAEQK Trigger: TTTTTGTTCAGCCGACAATCATTTTCTTCGTAAGCA...GAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCGTAGTATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGCATGTGTGTGCTATATTTATACAGAAATGGCTAGTAAGCTCCAGGGGCAATTaGGTTTGTTTCCAGGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: CVCVCVHVCAIFIQKWLVSSRGN*VCFQEA Trigger: AGCCTCCTGGAAACAAACCCAATTGCCCCTGGAGCT...TACTAGCCATTTCTGTATAAATATAGCACACACATGCACACACACACACACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR-3UTR TCA 90 bp | ATATTTATACAGAAATGGCTAGTAGCAAGGTATGCATACAACATGTGGCTAGGTAAAGTTGTGCTCAGCTaGCCGGAGAAATTGGAGCGG | + |
|
Preference number: 2 (lower is better) Translates to: IFIQKWLVARYAYNMWLGKVVLS*PEKLER Trigger: CCGCTCCAATTTCTCCGGTCAGCTGAGCACAACTTT...ACCTAGCCACATGTTGTATGCATACCTTGCTACTAGCCATTTCTGTATAAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR-3UTR CCA 90 bp | ATATTTATACAGAAATGGCTAGTAGCAAGGTATGCATACAACATGTGGCTAGGTGGGATAATCAACTTCTaGGCAGCCAATTTTGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: IFIQKWLVARYAYNMWLGGIINF*AANFGR Trigger: CCTGCCAAAATTGGCTGCCCAGAAGTTGATTATCCC...ACCTAGCCACATGTTGTATGCATACCTTGCTACTAGCCATTTCTGTATAAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CCA 72 bp | GCTGGCTGGGACCAGGAAGGCTCAGTTCAGCTCAGCTaGGGCCCGGAAAGAGACCCGCCAGTGGGAGGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: AGWDQEGSVQLS*GPERDPPVGGG Trigger: GCCGCCTCCCACTGGCGGGTCTCTTTCCGGGCCCCAGCTGAGCTGAACTGAGCCTTCCTGGTCCCAGCCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CCA 72 bp | CCCCACCCCTCAGGCCAGACAGCCATCCCAGCCGGCTaGCTGGGACCAGGAAGGCTCAGTTCAGCTCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PHPSGQTAIPAG*LGPGRLSSAQL Trigger: CAGCTGAGCTGAACTGAGCCTTCCTGGTCCCAGCCAGCCGGCTGGGATGGCTGTCTGGCCTGAGGGGTGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR GCA 72 bp | AACCACTTCCTCCCAGCCAGCTCTCCTCGGGAGTTGTaGGGCCACAGCCGGCCAGGAAAGCTTGGGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: NHFLPASSPREL*GHSRPGKLGAS Trigger: GCTGGCCCCAAGCTTTCCTGGCCGGCTGTGGCCGCACAACTCCCGAGGAGAGCTGGCTGGGAGGAAGTGGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| 3UTR CCA 72 bp | ACCTCTTTGGCCCCTTCTCAAGCGCGCAGGCCGCCTTaGCCCAGAGCAGCAGAACCACTTCCTCCCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TSLAPSQARRPP*PRAAEPLPPSQ Trigger: CTGGCTGGGAGGAAGTGGTTCTGCTGCTCTGGGCCAAGGCGGCCTGCGCGCTTGAGAAGGGGCCAAAGAGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| 3UTR TCA 72 bp | CTCAACCCTCTGATGAGGAGTTGCGGTGTGGCCCTGTaGCTCAGAGGCCCTCGGAGGCCCACACTCTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LNPLMRSCGVAL*LRGPRRPTLSA Trigger: AGCTGAGAGTGTGGGCCTCCGAGGGCCTCTGAGTCACAGGGCCACACCGCAACTCCTCATCAGAGGGTTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR GCA 72 bp | CGGGAAGCTGGGCTGTTACAGCACCCGGGAGCTGTTTaGCAGGGCGGACACAAACACCAGTCTCTGGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: REAGLLQHPGAV*QGGHKHQSLGV Trigger: CACTCCCAGAGACTGGTGTTTGTGTCCGCCCTGGCAAACAGCTCCCGGGTGCTGTAACAGCCCAGCTTCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| 3UTR GCA 72 bp | ATGCGTGCCTCCAGTCCCACTGTAGATCAGCATCCCTaGCTGGCACCGTGGCGGCTTCTGTGCCATTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: MRASSPTVDQHP*LAPWRLLCHFS Trigger: AGAGAAATGGCACAGAAGCCGCCACGGTGCCAGGCAGGGATGCTGATCTACAGTGGGACTGGAGGCACGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR GCA 72 bp | ACACCCCTTGCCCTGGGGGAACTAGAGCATGGCCACTaGCCCACAGGCCTGATACTAGGCTACAGGGTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: TPLALGELEHGH*PTGLILGYRVS Trigger: ACTAACCCTGTAGCCTAGTATCAGGCCTGTGGGGCAGTGGCCATGCTCTAGTTCCCCCAGGGCAAGGGGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CCA 72 bp | GAAGGGGAGGCAAGAAGCCCCCAGTCCACAGAGAAGTaGTCTCAACCCTCTGATGAGGAGTTGCGGTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: EGEARSPQSTEK*SQPSDEELRCG Trigger: GCCACACCGCAACTCCTCATCAGAGGGTTGAGACCACTTCTCTGTGGACTGGGGGCTTCTTGCCTCCCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR-3UTR CAA 90 bp | GTAACCCCCTACCCTCATGCCCCCTTTGCCTTTCCCTCGGGATCCTGTTTGGGCGTTTTCCACTCACATTaGGCATCCTTCCCCCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VTPYPHAPFAFPSGSCLGVFHSH*ASFPLP Trigger: GGGGAGGGGGAAGGATGCCAAATGTGAGTGGAAAAC...GCCCAAACAGGATCCCGAGGGAAAGGCAAAGGGGGCATGAGGGTAGGGGGTTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| 3UTR CCA 72 bp | AGGTGGCAGCCAGTACTCCAGGTGACAGCCACACAATaGTCTGGGCAGTACAGAAAGGTCAGGGTAGTGCGC | + |
|
Preference number: 3 (lower is better) Translates to: RWQPVLQVTATQ*SGQYRKVRVVR Trigger: GCGCACTACCCTGACCTTTCTGTACTGCCCAGACCATTGTGTGGCTGTCACCTGGAGTACTGGCTGCCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTCCCCGGCTCTGGCTCTGGCGGCCAGCGAGTTAGAGAGAGCAAGCGGGAAACAGAGGATTGCATTTaGTTTGACCAATACTTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PLPGSGSGGQRVRESKRETEDCI*FDQYLD Trigger: GTCCAAGTATTGGTCAAACAAAATGCAATCCTCTGT...TTCCCGCTTGCTCTCTCTAACTCGCTGGCCGCCAGAGCCAGAGCCGGGGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| 3UTR TCA 72 bp | GTAGGGAGACTCAGCCCCAGTGTCCAGGGAGGATTTTaGAAAGCCTCAGAGGTGGCAGCCAGTACTCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: VGRLSPSVQGGF*KASEVAASTPG Trigger: ACCTGGAGTACTGGCTGCCACCTCTGAGGCTTTTCAAAATCCTCCCTGGACACTGGGGCTGAGTCTCCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CCA 72 bp | GCAGCCAGTACTCCAGGTGACAGCCACACAATGGTCTaGGCAGTACAGAAAGGTCAGGGTAGTGCGCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: AASTPGDSHTMV*AVQKGQGSAQR Trigger: CCTTTGCGCACTACCCTGACCTTTCTGTACTGCCCAGACCATTGTGTGGCTGTCACCTGGAGTACTGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGAAGCCCCCAGTCCACAGAGAAGTGGTCTCAACCCTCTGATGAGGAGTTGCAGGGGCAATTGGGTTaGTTTCCAGGAGGCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: ARSPQSTEKWSQPSDEELQGQLG*FPGGWT Trigger: TGTCCAGCCTCCTGGAAACAAACCCAATTGCCCCTG...CAACTCCTCATCAGAGGGTTGAGACCACTTCTCTGTGGACTGGGGGCTTCTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR TCA 72 bp | GGTAGTGCGCAAAGGAAGACAAGGAGTACAAGAGTCTaGGACACCCCTTGCCCTGGGGGAACTAGAGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: GSAQRKTRSTRV*DTPCPGGTRAW Trigger: CCATGCTCTAGTTCCCCCAGGGCAAGGGGTGTCTCAGACTCTTGTACTCCTTGTCTTCCTTTGCGCACTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR GCA 72 bp | GATCAGCATCCCTGCCTGGCACCGTGGCGGCTTCTGTaGCATTTCTCTGAAGTCAGTTGTGTATCTCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: DQHPCLAPWRLL*HFSEVSCVSHQ Trigger: CTGGTGAGATACACAACTGACTTCAGAGAAATGGCACAGAAGCCGCCACGGTGCCAGGCAGGGATGCTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR GCA 72 bp | CTCCACAGTCTCTCCCACTTGACCTGTCTAGGTCTATaGTGGTCTTCCCAGTCCTGCGTTGGAACCAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LHSLSHLTCLGL*WSSQSCVGTSS Trigger: AGAGCTGGTTCCAACGCAGGACTGGGAAGACCAGCATAGACCTAGACAGGTCAAGTGGGAGAGACTGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR GCA 72 bp | GAAACTAGTTGTAACCCCCTACCCTCATGCCCCCTTTaGCTTTCCCTCGGGATCCTGTTTGGGCTCCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ETSCNPLPSCPL*LSLGILFGLPF Trigger: GAAAGGGAGCCCAAACAGGATCCCGAGGGAAAGGCAAAGGGGGCATGAGGGTAGGGGGTTACAACTAGTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| 3UTR CCA 72 bp | AGTCCCACTGTAGATCAGCATCCCTGCCTGGCACCGTaGCGGCTTCTGTGCCATTTCTCTGAAGTCAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SPTVDQHPCLAP*RLLCHFSEVSC Trigger: ACAACTGACTTCAGAGAAATGGCACAGAAGCCGCCACGGTGCCAGGCAGGGATGCTGATCTACAGTGGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CCA 72 bp | AAGTACATAGGTGTCTGTGACAAACTAGCAGTGGGCTaGCAGAGGCTGGAGTCACTCCCCTGCCTCCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: KYIGVCDKLAVG*QRLESLPCLHS Trigger: ACTGTGGAGGCAGGGGAGTGACTCCAGCCTCTGCCAGCCCACTGCTAGTTTGTCACAGACACCTATGTACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CCA 72 bp | GTGTATGTGTCTGTGTGTGTCTGTGTGTGTGGTATGTaGTCTAGCTTCTGTCAGCCTGGCTCTGCCTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VYVSVCVCVCGM*SSFCQPGSASP Trigger: GGGGGAGGCAGAGCCAGGCTGACAGAAGCTAGACCACATACCACACACACAGACACACACAGACACATACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CCA 72 bp | CTCATGCCCCCTTTGCCTTTCCCTCGGGATCCTGTTTaGGCTCCCTTTCCCCAAGCAAGTGTTTGTTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LMPPLPFPRDPV*APFPQASVCFQ Trigger: CTGGAAACAAACACTTGCTTGGGGAAAGGGAGCCCAAACAGGATCCCGAGGGAAAGGCAAAGGGGGCATGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| 3UTR TCA 72 bp | TTGAAAAGCCTCAGAGGTGGCAGCCAGTACTCCAGGTaGCAGCCACACAATGGTCTGGGCAGTACAGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LKSLRGGSQYSR*QPHNGLGSTER Trigger: CCTTTCTGTACTGCCCAGACCATTGTGTGGCTGTCACCTGGAGTACTGGCTGCCACCTCTGAGGCTTTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR GCA 72 bp | GTCATGGAAGAAACTAGTTGTAACCCCCTACCCTCATaGCCCCTTTGCCTTTCCCTCGGGATCCTGTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VMEETSCNPLPS*PLCLSLGILFG Trigger: CCCAAACAGGATCCCGAGGGAAAGGCAAAGGGGGCATGAGGGTAGGGGGTTACAACTAGTTTCTTCCATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| 3UTR CCA 72 bp | CTGTCTAGGTCTATGCTGGTCTTCCCAGTCCTGCGTTaGAACCAGCTCTGGAGTCAACATTGGGGTTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: LSRSMLVFPVLR*NQLWSQHWGYW Trigger: CCAGTAACCCCAATGTTGACTCCAGAGCTGGTTCCAACGCAGGACTGGGAAGACCAGCATAGACCTAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CCA 72 bp | TCGAATGGAAAGTTGTGCTCAGCTGACCGGAGAAATTaGAGCGGGGCTAGTACTGCTACCTCCTCCCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: SNGKLCSADRRN*SGASTATSSQT Trigger: AGTCTGGGAGGAGGTAGCAGTACTAGCCCCGCTCCAATTTCTCCGGTCAGCTGAGCACAACTTTCCATTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CCA 72 bp | CAAATAAATCGTCATGCAGGTGGGGTGCCGGGTCCGTaGGAACCAAAAGGAGAAGCCGTGCTTGTCCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QINRHAGGVPGP*EPKGEAVLVLE Trigger: TTCTAGGACAAGCACGGCTTCTCCTTTTGGTTCCCACGGACCCGGCACCCCACCTGCATGACGATTTATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| 3UTR CCA 72 bp | GCACTCCGGGGAGGATTCAGGCCTGACATCTTGTCATaGAAGAAACTAGTTGTAACCCCCTACCCTCATGCC | + |
|
Preference number: 3 (lower is better) Translates to: ALRGGFRPDILS*KKLVVTPYPHA Trigger: GGCATGAGGGTAGGGGGTTACAACTAGTTTCTTCCATGACAAGATGTCAGGCCTGAATCCTCCCCGGAGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| 3UTR GCA 72 bp | TTGACCTGTCTAGGTCTATGCTGGTCTTCCCAGTCCTaGGTTGGAACCAGCTCTGGAGTCAACATTGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LTCLGLCWSSQS*VGTSSGVNIGV Trigger: AACCCCAATGTTGACTCCAGAGCTGGTTCCAACGCAGGACTGGGAAGACCAGCATAGACCTAGACAGGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CCA 72 bp | CCTCCTTCTCCCACCCACTCCCGACCCTTGTTCATCTaGGCCCTAGTTAACCACTTTACATCTCCTCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PPSPTHSRPLFI*ALVNHFTSPPK Trigger: TTTTGGAGGAGATGTAAAGTGGTTAACTAGGGCCCAGATGAACAAGGGTCGGGAGTGGGTGGGAGAAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCGTGGGAACCAAAAGGAGAAGCCGTGCTTGTCCTAGAAAGTATACAATTGTCGTTTGTGACTGTCTGTaGGCGTCGCGGTCCTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SVGTKRRSRACPRKYTIVVCDCL*ASRSFG Trigger: CCCAAAGGACCGCGACGCCAACAGACAGTCACAAAC...GACAATTGTATACTTTCTAGGACAAGCACGGCTTCTCCTTTTGGTTCCCACGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| 3UTR GCA 72 bp | GAGTCCTGCCTGACACTGCAGAGCTCAATCAGCCACTaGATGAATACACTCGAATGGAAAGTTGTGCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ESCLTLQSSISH*MNTLEWKVVLS Trigger: GCTGAGCACAACTTTCCATTCGAGTGTATTCATGCAGTGGCTGATTGAGCTCTGCAGTGTCAGGCAGGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTAGTTGTAACCCCCTACCCTCATGCCCCCTTTGCCTTTCCCTCGGGATCCTGGCGGCTAGGAAAAACTaGAATAGCTTTTGCATAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TSCNPLPSCPLCLSLGILAARKN*NSFCIR Trigger: TCTTATGCAAAAGCTATTCAAGTTTTTCCTAGCCGC...CAGGATCCCGAGGGAAAGGCAAAGGGGGCATGAGGGTAGGGGGTTACAACTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| 3UTR-3UTR CAA 90 bp | TACCAAACATTCCAAGGGCTCACAAGCGCCGCGAGATGCAGCAAATCCAGGGTATCCCCAAGCAAGTGTTaGTTTCCAGTTTTCCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: YQTFQGLTSAARCSKSRVSPSKC*FPVFHS Trigger: TGAGTGGAAAACTGGAAACAAACACTTGCTTGGGGA...TACCCTGGATTTGCTGCATCTCGCGGCGCTTGTGAGCCCTTGGAATGTTTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| 3UTR TCA 72 bp | TTCCATTCCACTTTTGAAGAAGTACATAGGTGTCTGTaGCAAACTAGCAGTGGGCTGGCAGAGGCTGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: FHSTFEEVHRCL*QTSSGLAEAGV Trigger: GACTCCAGCCTCTGCCAGCCCACTGCTAGTTTGTCACAGACACCTATGTACTTCTTCAAAAGTGGAATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CCA 72 bp | ACGGTGTGTACCCTTAGGTATATAAAGTCCTGGCACTaGGAAAGCTCCCAACCTAATGCATTAGAAGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TVCTLRYIKSWH*ESSQPNALEGE Trigger: CTCCCCTTCTAATGCATTAGGTTGGGAGCTTTCCCAGTGCCAGGACTTTATATACCTAAGGGTACACACCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGCATGTGTGTGCTATATTTATACAGAAATGGCTAGTACCCTCTGATGAGGAGTaGCGGTGTGGCCCTGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVHVCAIFIQKWLVPSDEE*RCGPVT Trigger: AGTCACAGGGCCACACCGCAACTCCTCATCAGAGGG...TACTAGCCATTTCTGTATAAATATAGCACACACATGCACACACACACACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CCA 72 bp | CCATTGTTTGCCTCTGAGGGATGCAGAGAAGAGAATTaGATGTTACTCCTCAAACGGTGTGTACCCTTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PLFASEGCREEN*MLLLKRCVPLG Trigger: ACCTAAGGGTACACACCGTTTGAGGAGTAACATCCAATTCTCTTCTCTGCATCCCTCAGAGGCAAACAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR GCA 72 bp | CTTGTCCTAGAAAGTATACAATTGTCACCTCTTTTATaGTTTCTGCCCGCAACATCAGCGTTTGTGACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LVLESIQLSPLL*FLPATSAFVTV Trigger: GACAGTCACAAACGCTGATGTTGCGGGCAGAAAGCATAAAAGAGGTGACAATTGTATACTTTCTAGGACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| 3UTR GCA 72 bp | GCCTCCAAAGCGGCTAGGAAAAACTTGAATAGCTTTTaGATAAGAATACTACGGTCTCACTCTCTGCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ASKAARKNLNSF*IRILRSHSLLS Trigger: TGAAAGCAGAGAGTGAGACCGTAGTATTCTTATGCAAAAGCTATTCAAGTTTTTCCTAGCCGCTTTGGAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| 3UTR-3UTR CAA 90 bp | ATATTTATACAGAAATGGCTAGTAGCAAGGTATGCATACAACATGTGGCTAGGTAATTCTAGACAACCATaGTTTGCCTCTGAGGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: IFIQKWLVARYAYNMWLGNSRQP*FASEGC Trigger: GCATCCCTCAGAGGCAAACAATGGTTGTCTAGAATT...ACCTAGCCACATGTTGTATGCATACCTTGCTACTAGCCATTTCTGTATAAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CCA 72 bp | ACAGATTTTCACAGCTTCACAATCCACTCTTCTCCTTaGGTTTCCGATGCAAATTCTAGACAACCATTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: TDFHSFTIHSSP*VSDANSRQPLF Trigger: AAACAATGGTTGTCTAGAATTTGCATCGGAAACCCAAGGAGAAGAGTGGATTGTGAAGCTGTGAAAATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR-3UTR CAA 90 bp | ATATTTATACAGAAATGGCTAGTAGCAAGGTATGCATACAACATGTGGCTAGGTATGCAGAGAAGAGAATaGGATGTTACTCCTCAAACG | + |
|
Preference number: 3 (lower is better) Translates to: IFIQKWLVARYAYNMWLGMQRRE*DVTPQT Trigger: CGTTTGAGGAGTAACATCCAATTCTCTTCTCTGCAT...ACCTAGCCACATGTTGTATGCATACCTTGCTACTAGCCATTTCTGTATAAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR CCA 90 bp | CCTCGGGAGTTGTGCGGCCACAGCCGGCCAGGAAAGCTTGGGGCCAGCAGAGGAGCGCCTCGAGCCACATaGCTTGCAGCTTGCCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRELCGHSRPGKLGASRGAPRAT*LAACRE Trigger: CTCACGGCAAGCTGCAAGCCATGTGGCTCGAGGCGC...TCCTCTGCTGGCCCCAAGCTTTCCTGGCCGGCTGTGGCCGCACAACTCCCGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | GTAACCCCCTACCCTCATGCCCCCTTTGCCTTTCCCTCGGGATCCTGTTTGGGCCTGCTGAGCCGTGCGTaGGGCAGCCGGGCTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTPYPHAPFAFPSGSCLGLLSRA*GSRARP Trigger: TGGCCGAGCCCGGCTGCCCCACGCACGGCTCAGCAG...GCCCAAACAGGATCCCGAGGGAAAGGCAAAGGGGGCATGAGGGTAGGGGGTTAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | CTGTTGGCGTCGCGGTCCTTTGGGGTGGCCGTGGTAGTAGGTGGTGGTGGGGTTTCAGGCTGGACACACTaGTGGTCGGGCTGGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLASRSFGVAVVVGGGGVSGWTH*WSGWPP Trigger: CGGCGGCCAGCCCGACCACCAGTGTGTCCAGCCTGA...AACCCCACCACCACCTACTACCACGGCCACCCCAAAGGACCGCGACGCCAACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | GGGCTCACAAGCGCCGCGAGATGCAGCAAATCCAGGGTACAGCACTCCGGGGAGTCAGGCTGGACACACTaGTGGTCGGGCTGGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GLTSAARCSKSRVQHSGESGWTH*WSGWPP Trigger: CGGCGGCCAGCCCGACCACCAGTGTGTCCAGCCTGA...CTCCCCGGAGTGCTGTACCCTGGATTTGCTGCATCTCGCGGCGCTTGTGAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR TCA 90 bp | TCCCCGGCTCTGGCTCTGGCGGCCAGCGAGTTAGAGAGAGCAAGCGGGAAGCTGCTCGGCCCGATGGCCTaGTGCTGGAGCCTGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPALALAASELERASGKLLGPMA*CWSLFL Trigger: CAAGAACAGGCTCCAGCATCAGGCCATCGGGCCGAG...CAGCTTCCCGCTTGCTCTCTCTAACTCGCTGGCCGCCAGAGCCAGAGCCGGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | AGCCGGCCAGGAAAGCTTGGGGCCAGCAGAGGAACGTGGTCAGCAAGGGGTAGTCACTGGTGGTCGGGCTaGCCGCCGTGGACGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SRPGKLGASRGTWSARGSHWWSG*PPWTVT Trigger: AGTCACCGTCCACGGCGGCCAGCCCGACCACCAGTG...ACTACCCCTTGCTGACCACGTTCCTCTGCTGGCCCCAAGCTTTCCTGGCCGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR TCA 90 bp | ACCAGGAAGGCTCAGTTCAGCTCAGCTGGGGCCCGGAAAGAGACCCGCCAGTGGCTCGGCCCGATGGCCTaGTGCTGGAGCCTGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TRKAQFSSAGARKETRQWLGPMA*CWSLFL Trigger: CAAGAACAGGCTCCAGCATCAGGCCATCGGGCCGAG...CCACTGGCGGGTCTCTTTCCGGGCCCCAGCTGAGCTGAACTGAGCCTTCCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR GCA 90 bp | CTGTTGGCGTCGCGGTCCTTTGGGGTGGCCGTGGTAGTAGGTGGTGGTGGGGTTCAGACGCTGGCCACCTaGTCCGGCGAGAAGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLASRSFGVAVVVGGGGVQTLAT*SGEKLR Trigger: CCTCAACTTCTCGCCGGAGCAGGTGGCCAGCGTCTG...AACCCCACCACCACCTACTACCACGGCCACCCCAAAGGACCGCGACGCCAACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR GCA 90 bp | GGGCTCACAAGCGCCGCGAGATGCAGCAAATCCAGGGTACAGCACTCCGGGGAGCAGACGCTGGCCACCTaGTCCGGCGAGAAGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLTSAARCSKSRVQHSGEQTLAT*SGEKLR Trigger: CCTCAACTTCTCGCCGGAGCAGGTGGCCAGCGTCTG...CTCCCCGGAGTGCTGTACCCTGGATTTGCTGCATCTCGCGGCGCTTGTGAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR GCA 90 bp | GGCCCTGAAGTCAGAAAACTGCCTCCTTCTCCCACCCACTCCCGACCCTTGTTCGACTCTGCTGAGCCGTaGGTGGGGCAGCCGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GPEVRKLPPSPTHSRPLFDSAEP*VGQPGS Trigger: CGAGCCCGGCTGCCCCACGCACGGCTCAGCAGAGTC...GAACAAGGGTCGGGAGTGGGTGGGAGAAGGAGGCAGTTTTCTGACTTCAGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | CAGGCTCACATGCGTGCCTCCAGTCCCACTGTAGATCAGCATCCCTGCCTGGCACACTGGTGGTCGGGCTaGCCGCCGTGGACGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: QAHMRASSPTVDQHPCLAHWWSG*PPWTVT Trigger: AGTCACCGTCCACGGCGGCCAGCCCGACCACCAGTG...TGCCAGGCAGGGATGCTGATCTACAGTGGGACTGGAGGCACGCATGTGAGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGGTGCCGGGTCCGTGGGAACCAAAAGGAGAAGCCGTGCTTGTCCTAGACGCGCTCCGTCAGGCTaGACACACTGGTGGTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RWGAGSVGTKRRSRACPRRAPSG*THWWSG Trigger: GCCCGACCACCAGTGTGTCCAGCCTGACGGAGCGCG...TCTAGGACAAGCACGGCTTCTCCTTTTGGTTCCCACGGACCCGGCACCCCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR TCA 90 bp | CTGTTGGCGTCGCGGTCCTTTGGGGTGGCCGTGGTAGTAGGTGGTGGTGGGGTTGCTCCGGCGAGAAGTTaGGGGTGGGCAACTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LLASRSFGVAVVVGGGGVAPARS*GWATGT Trigger: TGTTCCAGTTGCCCACCCTCAACTTCTCGCCGGAGC...AACCCCACCACCACCTACTACCACGGCCACCCCAAAGGACCGCGACGCCAACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | GCAAGAAGCCCCCAGTCCACAGAGAAGTGGTCTCAACCCTCTGATGAGGAGTTGCTGCTGAGCCGTGCGTaGGGCAGCCGGGCTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARSPQSTEKWSQPSDEELLLSRA*GSRARP Trigger: TGGCCGAGCCCGGCTGCCCCACGCACGGCTCAGCAG...CAACTCCTCATCAGAGGGTTGAGACCACTTCTCTGTGGACTGGGGGCTTCTTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR TCA 90 bp | AGGTGGGGTGCCGGGTCCGTGGGAACCAAAAGGAGAAGCCGTGCTTGTCCTAGACTCGGCCCGATGGCCTaGTGCTGGAGCCTGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RWGAGSVGTKRRSRACPRLGPMA*CWSLFL Trigger: CAAGAACAGGCTCCAGCATCAGGCCATCGGGCCGAG...TCTAGGACAAGCACGGCTTCTCCTTTTGGTTCCCACGGACCCGGCACCCCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR GCA 90 bp | TACCAAACATTCCAAGGGCTCACAAGCGCCGCGAGATGCAGCAAATCCAGGGTAGTTCTTGGCCGCCGCTaGGCGGTCGCGCTGTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YQTFQGLTSAARCSKSRVVLGRR*AVALSP Trigger: CGGCGACAGCGCGACCGCGCAGCGGCGGCCAAGAAC...TACCCTGGATTTGCTGCATCTCGCGGCGCTTGTGAGCCCTTGGAATGTTTGGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | CAGGCTCACATGCGTGCCTCCAGTCCCACTGTAGATCAGCATCCCTGCCTGGCAGCGCCTCGAGCCACATaGCTTGCAGCTTGCCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QAHMRASSPTVDQHPCLAAPRAT*LAACRE Trigger: CTCACGGCAAGCTGCAAGCCATGTGGCTCGAGGCGC...TGCCAGGCAGGGATGCTGATCTACAGTGGGACTGGAGGCACGCATGTGAGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR CCA 90 bp | TTGGTCTGTCTTTCCTCCCGGTGGGGAGGGGTTAGGAGCAGGGTCTTGGACACATCCCGCTCGGCCCGATaGCCTGATGCTGGAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVCLSSRWGGVRSRVLDTSRSAR*PDAGAC Trigger: ACAGGCTCCAGCATCAGGCCATCGGGCCGAGCGGGA...TGTGTCCAAGACCCTGCTCCTAACCCCTCCCCACCGGGAGGAAAGACAGACCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR CCA 90 bp | ACTAGTTGTAACCCCCTACCCTCATGCCCCCTTTGCCTTTCCCTCGGGATCCTGTCGGGCTGGCCGCCGTaGACGGTGACTCTGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSCNPLPSCPLCLSLGILSGWPP*TVTLLS Trigger: GCTCAGCAGAGTCACCGTCCACGGCGGCCAGCCCGA...CAGGATCCCGAGGGAAAGGCAAAGGGGGCATGAGGGTAGGGGGTTACAACTAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | TCCCCGGCTCTGGCTCTGGCGGCCAGCGAGTTAGAGAGAGCAAGCGGGAAGCTGCACATTCCGAGTCGCTaGAGGTTACCGAGAGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: SPALALAASELERASGKLHIPSR*RLPRGS Trigger: CGATCCTCTCGGTAACCTCCAGCGACTCGGAATGTG...CAGCTTCCCGCTTGCTCTCTCTAACTCGCTGGCCGCCAGAGCCAGAGCCGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR GCA 90 bp | AACCAGGCTCACATGCGTGCCTCCAGTCCCACTGTAGATCAGCATCCCTGCCTGCAGACGCTGGCCACCTaGTCCGGCGAGAAGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NQAHMRASSPTVDQHPCLQTLAT*SGEKLR Trigger: CCTCAACTTCTCGCCGGAGCAGGTGGCCAGCGTCTG...CAGGCAGGGATGCTGATCTACAGTGGGACTGGAGGCACGCATGTGAGCCTGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR GCA 90 bp | AGAATACTACGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCGTTCTTGGCCGCCGCTaGGCGGTCGCGCTGTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RILRSHSLLSLATGSLSLVLGRR*AVALSP Trigger: CGGCGACAGCGCGACCGCGCAGCGGCGGCCAAGAAC...GAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCGTAGTATTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR GCA 90 bp | CGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCTTTCTCTCTGACTCTGCTGAGCCGTaGGTGGGGCAGCCGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RSHSLLSLATGSLSLFLSDSAEP*VGQPGS Trigger: CGAGCCCGGCTGCCCCACGCACGGCTCAGCAGAGTC...AGAGAGAAAGAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | AGAATACTACGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCCTGCTGAGCCGTGCGTaGGGCAGCCGGGCTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RILRSHSLLSLATGSLSLLLSRA*GSRARP Trigger: TGGCCGAGCCCGGCTGCCCCACGCACGGCTCAGCAG...GAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCGTAGTATTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | GCCACACAATGGTCTGGGCAGTACAGAAAGGTCAGGGTAGTGCGCAAAGGAAGAGGCTGGACACACTGGTaGTCGGGCTGGCCGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATQWSGQYRKVRVVRKGRGWTHW*SGWPPW Trigger: CCACGGCGGCCAGCCCGACCACCAGTGTGTCCAGCC...TCTTCCTTTGCGCACTACCCTGACCTTTCTGTACTGCCCAGACCATTGTGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR TCA 90 bp | GTCATGCAGGTGGGGTGCCGGGTCCGTGGGAACCAAAAGGAGAAGCCGTGCTTGAGTAGGGAGCAGTGGTaGGAATCGGCGAAGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VMQVGCRVRGNQKEKPCLSREQW*ESAKFG Trigger: GCCAAACTTCGCCGATTCTCACCACTGCTCCCTACT...CAAGCACGGCTTCTCCTTTTGGTTCCCACGGACCCGGCACCCCACCTGCATGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR TCA 90 bp | ACTAGTTGTAACCCCCTACCCTCATGCCCCCTTTGCCTTTCCCTCGGGATCCTGTCGACTCGTGTTTGTTaGTGGCCTCGCACGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TSCNPLPSCPLCLSLGILSTRVC*WPRTPR Trigger: CCGGGGCGTGCGAGGCCATCAACAAACACGAGTCGA...CAGGATCCCGAGGGAAAGGCAAAGGGGGCATGAGGGTAGGGGGTTACAACTAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR GCA 90 bp | CTGTTGGCGTCGCGGTCCTTTGGGGTGGCCGTGGTAGTAGGTGGTGGTGGGGTTAAGCAATGGGTCTTCTaGTCGCCATCCCAGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLASRSFGVAVVVGGGGVKQWVF*SPSQMV Trigger: CACCATCTGGGATGGCGAGCAGAAGACCCATTGCTT...AACCCCACCACCACCTACTACCACGGCCACCCCAAAGGACCGCGACGCCAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | TACCAAACATTCCAAGGGCTCACAAGCGCCGCGAGATGCAGCAAATCCAGGGTACGCGCTCCGTCAGGCTaGACACACTGGTGGTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YQTFQGLTSAARCSKSRVRAPSG*THWWSG Trigger: GCCCGACCACCAGTGTGTCCAGCCTGACGGAGCGCG...TACCCTGGATTTGCTGCATCTCGCGGCGCTTGTGAGCCCTTGGAATGTTTGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| 3UTR CAA 72 bp | TCCACAGAGAAGTGGTCTCAACCCTCTGATGAGGAGTaGCGGTGTGGCCCTGTGACTCAGAGGCCCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: STEKWSQPSDEE*RCGPVTQRPSE Trigger: CTCCGAGGGCCTCTGAGTCACAGGGCCACACCGCAACTCCTCATCAGAGGGTTGAGACCACTTCTCTGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR TCA 90 bp | GTCATGCAGGTGGGGTGCCGGGTCCGTGGGAACCAAAAGGAGAAGCCGTGCTTGGCTTGCAGCTTGCCGTaGGACTCCTTAGTGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VMQVGCRVRGNQKEKPCLACSLP*DSLVNL Trigger: CAAGTTCACTAAGGAGTCTCACGGCAAGCTGCAAGC...CAAGCACGGCTTCTCCTTTTGGTTCCCACGGACCCGGCACCCCACCTGCATGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGGTGCCGGGTCCGTGGGAACCAAAAGGAGAAGCCGTGCTTGTCCTAGAGTTCGCGTTTCTTGCTaGGGTTGGGGTAGGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RWGAGSVGTKRRSRACPRVRVSC*GWGRDP Trigger: AGGATCCCTACCCCAACCCCAGCAAGAAACGCGAAC...TCTAGGACAAGCACGGCTTCTCCTTTTGGTTCCCACGGACCCGGCACCCCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | AGAATACTACGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCTCGGGCTGGCCGCCGTaGACGGTGACTCTGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RILRSHSLLSLATGSLSLSGWPP*TVTLLS Trigger: GCTCAGCAGAGTCACCGTCCACGGCGGCCAGCCCGA...GAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCGTAGTATTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR TCA 90 bp | GTACAAGAGTCTGAGACACCCCTTGCCCTGGGGGAACTAGAGCATGGCCACTGCAGTAGGGAGCAGTGGTaGGAATCGGCGAAGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQESETPLALGELEHGHCSREQW*ESAKFG Trigger: GCCAAACTTCGCCGATTCTCACCACTGCTCCCTACT...GCAGTGGCCATGCTCTAGTTCCCCCAGGGCAAGGGGTGTCTCAGACTCTTGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR TCA 90 bp | CGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCTTTCTCTCTTCGACTCGTGTTTGTTaGTGGCCTCGCACGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RSHSLLSLATGSLSLFLSSTRVC*WPRTPR Trigger: CCGGGGCGTGCGAGGCCATCAACAAACACGAGTCGA...AGAGAGAAAGAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | CTGTTGGCGTCGCGGTCCTTTGGGGTGGCCGTGGTAGTAGGTGGTGGTGGGGTTAGAATCGGCGAAGTTTaGCAACAAGAAGTGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLASRSFGVAVVVGGGGVRIGEV*QQEVGG Trigger: TCCTCCCACTTCTTGTTGCCAAACTTCGCCGATTCT...AACCCCACCACCACCTACTACCACGGCCACCCCAAAGGACCGCGACGCCAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | AGAATACTACGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCTCCCGCTCGGCCCGATaGCCTGATGCTGGAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RILRSHSLLSLATGSLSLSRSAR*PDAGAC Trigger: ACAGGCTCCAGCATCAGGCCATCGGGCCGAGCGGGA...GAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCGTAGTATTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | AGGGATAATCAACTTCTGGGCAGCCAATTTTGGCAGGATTCAGAGGGCAGGAAGTCAGGCTGGACACACTaGTGGTCGGGCTGGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RDNQLLGSQFWQDSEGRKSGWTH*WSGWPP Trigger: CGGCGGCCAGCCCGACCACCAGTGTGTCCAGCCTGA...CTTCCTGCCCTCTGAATCCTGCCAAAATTGGCTGCCCAGAAGTTGATTATCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CAA 72 bp | CTGGAGTCACTCCCCTGCCTCCACAGTCTCTCCCACTaGACCTGTCTAGGTCTATGCTGGTCTTCCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LESLPCLHSLSH*TCLGLCWSSQS Trigger: GGACTGGGAAGACCAGCATAGACCTAGACAGGTCAAGTGGGAGAGACTGTGGAGGCAGGGGAGTGACTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CAA 72 bp | CTTTCTGCCCGCAACATCAGCGTTTGTGACTGTCTGTaGGCGTCGCGGTCCTTTGGGGTGGCCGTGGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSARNISVCDCL*ASRSFGVAVVV Trigger: TACTACCACGGCCACCCCAAAGGACCGCGACGCCAACAGACAGTCACAAACGCTGATGTTGCGGGCAGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR TCA 90 bp | ACTAGTTGTAACCCCCTACCCTCATGCCCCCTTTGCCTTTCCCTCGGGATCCTGAGTAGGGAGCAGTGGTaGGAATCGGCGAAGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSCNPLPSCPLCLSLGILSREQW*ESAKFG Trigger: GCCAAACTTCGCCGATTCTCACCACTGCTCCCTACT...CAGGATCCCGAGGGAAAGGCAAAGGGGGCATGAGGGTAGGGGGTTACAACTAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR GCA 90 bp | GAGGGATGCAGAGAAGAGAATTGGATGTTACTCCTCAAACGGTGTGTACCCTTAGACTCTGCTGAGCCGTaGGTGGGGCAGCCGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EGCREENWMLLLKRCVPLDSAEP*VGQPGS Trigger: CGAGCCCGGCTGCCCCACGCACGGCTCAGCAGAGTC...TAAGGGTACACACCGTTTGAGGAGTAACATCCAATTCTCTTCTCTGCATCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR CCA 90 bp | ACTAGCAGTGGGCTGGCAGAGGCTGGAGTCACTCCCCTGCCTCCACAGTCTCTCAGAATCGGCGAAGTTTaGCAACAAGAAGTGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSSGLAEAGVTPLPPQSLRIGEV*QQEVGG Trigger: TCCTCCCACTTCTTGTTGCCAAACTTCGCCGATTCT...GAGAGACTGTGGAGGCAGGGGAGTGACTCCAGCCTCTGCCAGCCCACTGCTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR CCA 90 bp | TCCGTGGGAACCAAAAGGAGAAGCCGTGCTTGTCCTAGAAAGTATACAATTGTCGGCTGGACACACTGGTaGTCGGGCTGGCCGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVGTKRRSRACPRKYTIVGWTHW*SGWPPW Trigger: CCACGGCGGCCAGCCCGACCACCAGTGTGTCCAGCC...GACAATTGTATACTTTCTAGGACAAGCACGGCTTCTCCTTTTGGTTCCCACGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | ATGCTTTCTGCCCGCAACATCAGCGTTTGTGACTGTCTGTTGGCGTCGCGGTCCCACATTCCGAGTCGCTaGAGGTTACCGAGAGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: MLSARNISVCDCLLASRSHIPSR*RLPRGS Trigger: CGATCCTCTCGGTAACCTCCAGCGACTCGGAATGTG...GGACCGCGACGCCAACAGACAGTCACAAACGCTGATGTTGCGGGCAGAAAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR GCA 90 bp | GAAGCCCCCAGTCCACAGAGAAGTGGTCTCAACCCTCTGATGAGGAGTTGCGGTAAGCAATGGGTCTTCTaGTCGCCATCCCAGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EAPSPQRSGLNPLMRSCGKQWVF*SPSQMV Trigger: CACCATCTGGGATGGCGAGCAGAAGACCCATTGCTT...ACCGCAACTCCTCATCAGAGGGTTGAGACCACTTCTCTGTGGACTGGGGGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR GCA 90 bp | ACTAGTTGTAACCCCCTACCCTCATGCCCCCTTTGCCTTTCCCTCGGGATCCTGAAGCAATGGGTCTTCTaGTCGCCATCCCAGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSCNPLPSCPLCLSLGILKQWVF*SPSQMV Trigger: CACCATCTGGGATGGCGAGCAGAAGACCCATTGCTT...CAGGATCCCGAGGGAAAGGCAAAGGGGGCATGAGGGTAGGGGGTTACAACTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR GCA 90 bp | AGTTGTAACCCCCTACCCTCATGCCCCCTTTGCCTTTCCCTCGGGATCCTGTTTCCAGTTCGCGTTTCTTaGTGGGGTTGGGGTAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SCNPLPSCPLCLSLGILFPVRVS*WGWGRD Trigger: ATCCCTACCCCAACCCCAGCAAGAAACGCGAACTGG...AAACAGGATCCCGAGGGAAAGGCAAAGGGGGCATGAGGGTAGGGGGTTACAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR GCA 90 bp | CCGTGGCGGCTTCTGTGCCATTTCTCTGAAGTCAGTTGTGTATCTCACCAGGGATGCCCAGCCATCCCATaGGACTTGACTGCTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PWRLLCHFSEVSCVSHQGCPAIP*DLTALA Trigger: GGCCAAAGCAGTCAAGTCGCATGGGATGGCTGGGCA...TCCCTGGTGAGATACACAACTGACTTCAGAGAAATGGCACAGAAGCCGCCACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR CCA 90 bp | GTACAAGAGTCTGAGACACCCCTTGCCCTGGGGGAACTAGAGCATGGCCACTGCTTGAGGGTGGGCAACTaGAACATGGACAACTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VQESETPLALGELEHGHCLRVGN*NMDNSS Trigger: GGAAGAGTTGTCCATGTTCCAGTTGCCCACCCTCAA...GCAGTGGCCATGCTCTAGTTCCCCCAGGGCAAGGGGTGTCTCAGACTCTTGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR CCA 90 bp | GCAAGAAGCCCCCAGTCCACAGAGAAGTGGTCTCAACCCTCTGATGAGGAGTTGGTTCGCGTTTCTTGCTaGGGTTGGGGTAGGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ARSPQSTEKWSQPSDEELVRVSC*GWGRDP Trigger: AGGATCCCTACCCCAACCCCAGCAAGAAACGCGAAC...CAACTCCTCATCAGAGGGTTGAGACCACTTCTCTGTGGACTGGGGGCTTCTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR CCA 90 bp | GAGGGATGCAGAGAAGAGAATTGGATGTTACTCCTCAAACGGTGTGTACCCTTACGCGCTCCGTCAGGCTaGACACACTGGTGGTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGCREENWMLLLKRCVPLRAPSG*THWWSG Trigger: GCCCGACCACCAGTGTGTCCAGCCTGACGGAGCGCG...TAAGGGTACACACCGTTTGAGGAGTAACATCCAATTCTCTTCTCTGCATCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CAA 72 bp | CCTCATGCCCCCTTTGCCTTTCCCTCGGGATCCTGTTaGGGCTCCCTTTCCCCAAGCAAGTGTTTGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHAPFAFPSGSC*GSLSPSKCLFP Trigger: TGGAAACAAACACTTGCTTGGGGAAAGGGAGCCCAAACAGGATCCCGAGGGAAAGGCAAAGGGGGCATGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR TCA 90 bp | AGGGATAATCAACTTCTGGGCAGCCAATTTTGGCAGGATTCAGAGGGCAGGAAGGCTCCGGCGAGAAGTTaGGGGTGGGCAACTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: RDNQLLGSQFWQDSEGRKAPARS*GWATGT Trigger: TGTTCCAGTTGCCCACCCTCAACTTCTCGCCGGAGC...CTTCCTGCCCTCTGAATCCTGCCAAAATTGGCTGCCCAGAAGTTGATTATCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR TCA 90 bp | ATAATCAACTTCTGGGCAGCCAATTTTGGCAGGATTCAGAGGGCAGGAAGAAGGTCGACTCGTGTTTGTTaGTGGCCTCGCACGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IINFWAANFGRIQRAGRRSTRVC*WPRTPR Trigger: CCGGGGCGTGCGAGGCCATCAACAAACACGAGTCGA...CCTTCTTCCTGCCCTCTGAATCCTGCCAAAATTGGCTGCCCAGAAGTTGATTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR GCA 90 bp | GCCACACAATGGTCTGGGCAGTACAGAAAGGTCAGGGTAGTGCGCAAAGGAAGACCAGTTCGCGTTTCTTaGTGGGGTTGGGGTAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ATQWSGQYRKVRVVRKGRPVRVS*WGWGRD Trigger: ATCCCTACCCCAACCCCAGCAAGAAACGCGAACTGG...TCTTCCTTTGCGCACTACCCTGACCTTTCTGTACTGCCCAGACCATTGTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR GCA 90 bp | CGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCTTTCTCTCTCCAGTTCGCGTTTCTTaGTGGGGTTGGGGTAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RSHSLLSLATGSLSLFLSPVRVS*WGWGRD Trigger: ATCCCTACCCCAACCCCAGCAAGAAACGCGAACTGG...AGAGAGAAAGAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | GGCCCTGAAGTCAGAAAACTGCCTCCTTCTCCCACCCACTCCCGACCCTTGTTCAGAATCGGCGAAGTTTaGCAACAAGAAGTGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPEVRKLPPSPTHSRPLFRIGEV*QQEVGG Trigger: TCCTCCCACTTCTTGTTGCCAAACTTCGCCGATTCT...GAACAAGGGTCGGGAGTGGGTGGGAGAAGGAGGCAGTTTTCTGACTTCAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | GTAACCCCCTACCCTCATGCCCCCTTTGCCTTTCCCTCGGGATCCTGTTTGGGCTCCTTAGTGAACTTGTaGTTCTCCAGGATGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VTPYPHAPFAFPSGSCLGSLVNL*FSRMWY Trigger: GTACCACATCCTGGAGAACCACAAGTTCACTAAGGA...GCCCAAACAGGATCCCGAGGGAAAGGCAAAGGGGGCATGAGGGTAGGGGGTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | GCCGTGGTAGTAGGTGGTGGTGGGGTTGTTGATGGTTTGAGGTTAATTTATTTTCACTGGTGGTCGGGCTaGCCGCCGTGGACGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: AVVVGGGGVVDGLRLIYFHWWSG*PPWTVT Trigger: AGTCACCGTCCACGGCGGCCAGCCCGACCACCAGTG...AAAATAAATTAACCTCAAACCATCAACAACCCCACCACCACCTACTACCACGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR TCA 90 bp | AGAATACTACGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCTCCGAGTCCGCTCCTTaGAGCAATGGGTCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RILRSHSLLSLATGSLSLSESAP*SNGSSA Trigger: AGCAGAAGACCCATTGCTTCAAGGAGCGGACTCGGA...GAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCGTAGTATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGCATGTGTGTGCTATATTTATACAGAAATGGCTAGTAGTTCTTGGCCGCCGCTaGGCGGTCGCGCTGTCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVHVCAIFIQKWLVVLGRR*AVALSP Trigger: CGGCGACAGCGCGACCGCGCAGCGGCGGCCAAGAAC...TACTAGCCATTTCTGTATAAATATAGCACACACATGCACACACACACACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR CCA 90 bp | TCCGTGGGAACCAAAAGGAGAAGCCGTGCTTGTCCTAGAAAGTATACAATTGTCGCGCCTCGAGCCACATaGCTTGCAGCTTGCCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVGTKRRSRACPRKYTIVAPRAT*LAACRE Trigger: CTCACGGCAAGCTGCAAGCCATGTGGCTCGAGGCGC...GACAATTGTATACTTTCTAGGACAAGCACGGCTTCTCCTTTTGGTTCCCACGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | GCCGTGGTAGTAGGTGGTGGTGGGGTTGTTGATGGTTTGAGGTTAATTTATTTTTCCCGCTCGGCCCGATaGCCTGATGCTGGAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AVVVGGGGVVDGLRLIYFSRSAR*PDAGAC Trigger: ACAGGCTCCAGCATCAGGCCATCGGGCCGAGCGGGA...AAAATAAATTAACCTCAAACCATCAACAACCCCACCACCACCTACTACCACGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR TCA 90 bp | AGAATACTACGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCGCTTGCAGCTTGCCGTaGGACTCCTTAGTGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RILRSHSLLSLATGSLSLACSLP*DSLVNL Trigger: CAAGTTCACTAAGGAGTCTCACGGCAAGCTGCAAGC...GAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCGTAGTATTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR GCA 90 bp | GCCGTGGTAGTAGGTGGTGGTGGGGTTGTTGATGGTTTGAGGTTAATTTATTTTACAGGTCGCGGAAGTTaGCGGTGTGGAAGGCGACGA | + |
|
Preference number: 4 (lower is better) Translates to: AVVVGGGGVVDGLRLIYFTGRGS*RCGRRR Trigger: TCGTCGCCTTCCACACCGGCAACTTCCGCGACCTGT...AAAATAAATTAACCTCAAACCATCAACAACCCCACCACCACCTACTACCACGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGCATGTGTGTGCTATATTTATACAGAAATGGCTAGTATCGGGCTGGCCGCCGTaGACGGTGACTCTGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVHVCAIFIQKWLVSGWPP*TVTLLS Trigger: GCTCAGCAGAGTCACCGTCCACGGCGGCCAGCCCGA...TACTAGCCATTTCTGTATAAATATAGCACACACATGCACACACACACACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR TCA 90 bp | GTTGTGTATCTCACCAGGGATAATCAACTTCTGGGCAGCCAATTTTGGCAGGATTCCGAGTCCGCTCCTTaGAGCAATGGGTCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VVYLTRDNQLLGSQFWQDSESAP*SNGSSA Trigger: AGCAGAAGACCCATTGCTTCAAGGAGCGGACTCGGA...ATCCTGCCAAAATTGGCTGCCCAGAAGTTGATTATCCCTGGTGAGATACACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR TCA 90 bp | GCCGTGGTAGTAGGTGGTGGTGGGGTTGTTGATGGTTTGAGGTTAATTTATTTTTCCGAGTCCGCTCCTTaGAGCAATGGGTCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVVVGGGGVVDGLRLIYFSESAP*SNGSSA Trigger: AGCAGAAGACCCATTGCTTCAAGGAGCGGACTCGGA...AAAATAAATTAACCTCAAACCATCAACAACCCCACCACCACCTACTACCACGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | AGAATACTACGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCTCCTTAGTGAACTTGTaGTTCTCCAGGATGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RILRSHSLLSLATGSLSLSLVNL*FSRMWY Trigger: GTACCACATCCTGGAGAACCACAAGTTCACTAAGGA...GAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCGTAGTATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | GCCGTGGTAGTAGGTGGTGGTGGGGTTGTTGATGGTTTGAGGTTAATTTATTTTGTTCGCGTTTCTTGCTaGGGTTGGGGTAGGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVVVGGGGVVDGLRLIYFVRVSC*GWGRDP Trigger: AGGATCCCTACCCCAACCCCAGCAAGAAACGCGAAC...AAAATAAATTAACCTCAAACCATCAACAACCCCACCACCACCTACTACCACGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| 3UTR CAA 72 bp | GGATCCTGTTTGGGCTCCCTTTCCCCAAGCAAGTGTTaGTTTCCAGTTTTCCACTCACATTTGGCATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSCLGSLSPSKC*FPVFHSHLASF Trigger: GAAGGATGCCAAATGTGAGTGGAAAACTGGAAACAAACACTTGCTTGGGGAAAGGGAGCCCAAACAGGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
||
| CDS-3UTR CCA 90 bp | TCCGTGGGAACCAAAAGGAGAAGCCGTGCTTGTCCTAGAAAGTATACAATTGTCTTGAGGGTGGGCAACTaGAACATGGACAACTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVGTKRRSRACPRKYTIVLRVGN*NMDNSS Trigger: GGAAGAGTTGTCCATGTTCCAGTTGCCCACCCTCAA...GACAATTGTATACTTTCTAGGACAAGCACGGCTTCTCCTTTTGGTTCCCACGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS-3UTR TCA 90 bp | GATTTTCACAGCTTCACAATCCACTCTTCTCCTTGGGTTTCCGATGCAAATTCTGCTTGCAGCTTGCCGTaGGACTCCTTAGTGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: DFHSFTIHSSPWVSDANSACSLP*DSLVNL Trigger: CAAGTTCACTAAGGAGTCTCACGGCAAGCTGCAAGC...AGAATTTGCATCGGAAACCCAAGGAGAAGAGTGGATTGTGAAGCTGTGAAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR GCA 90 bp | ATATTTATACAGAAATGGCTAGTAGCAAGGTATGCATACAACATGTGGCTAGGTACAGGTCGCGGAAGTTaGCGGTGTGGAAGGCGACGA | + |
|
Preference number: 4 (lower is better) Translates to: IFIQKWLVARYAYNMWLGTGRGS*RCGRRR Trigger: TCGTCGCCTTCCACACCGGCAACTTCCGCGACCTGT...ACCTAGCCACATGTTGTATGCATACCTTGCTACTAGCCATTTCTGTATAAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| CDS-3UTR CCA 90 bp | CAAACGGTGTGTACCCTTAGGTATATAAAGTCCTGGCACTGGGAAAGCTCCCAATCCTTAGTGAACTTGTaGTTCTCCAGGATGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QTVCTLRYIKSWHWESSQSLVNL*FSRMWY Trigger: GTACCACATCCTGGAGAACCACAAGTTCACTAAGGA...TTGGGAGCTTTCCCAGTGCCAGGACTTTATATACCTAAGGGTACACACCGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CAA 72 bp | TCTCCTTGGGTTTCCGATGCAAATTCTAGACAACCATaGTTTGCCTCTGAGGGATGCAGAGAAGAGAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPWVSDANSRQP*FASEGCREENW Trigger: CCAATTCTCTTCTCTGCATCCCTCAGAGGCAAACAATGGTTGTCTAGAATTTGCATCGGAAACCCAAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CAA 72 bp | CTTGGGTTTCCGATGCAAATTCTAGACAACCATTGTTaGCCTCTGAGGGATGCAGAGAAGAGAATTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LGFPMQILDNHC*PLRDAEKRIGC Trigger: ACATCCAATTCTCTTCTCTGCATCCCTCAGAGGCAAACAATGGTTGTCTAGAATTTGCATCGGAAACCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CAA 72 bp | TGGGTTCAAAATGTGCCAGGCAGTTCCATTCCACTTTaGAAGAAGTACATAGGTGTCTGTGACAAACTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WVQNVPGSSIPL*KKYIGVCDKLA Trigger: TGCTAGTTTGTCACAGACACCTATGTACTTCTTCAAAAGTGGAATGGAACTGCCTGGCACATTTTGAACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
||
| 3UTR CAA 72 bp | AAAGGAGAAGCCGTGCTTGTCCTAGAAAGTATACAATaGTCACCTCTTTTATGCTTTCTGCCCGCAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: KGEAVLVLESIQ*SPLLCFLPATS Trigger: TGATGTTGCGGGCAGAAAGCATAAAAGAGGTGACAATTGTATACTTTCTAGGACAAGCACGGCTTCTCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS GCA 90 bp | CTGGTGGTCGGGCTGGCCGCCGTGGACGGTGACTCTGCTGAGCCGTaGGTGGGGCAGCCGGGCTCGGCCAGCGAGCGCATCCCGCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVVGLAAVDGDSAEP*VGQPGSASERIPLG Trigger: GCCGAGCGGGATGCGCTCGCTGGCCGAGCCCGGCTGCCCCACGCACGGCTCAGCAGAGTCACCGTCCACGGCGGCCAGCCCGACCACCAG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162695.3 ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS CCA 90 bp | CGCGCTCCGTCAGGCTGGACACACTGGTGGTCGGGCTGGCCGCCGTaGACGGTGACTCTGCTGAGCCGTGCGTGGGGCAGCCGGGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RAPSGWTHWWSGWPP*TVTLLSRAWGSRAR Trigger: CCGAGCCCGGCTGCCCCACGCACGGCTCAGCAGAGTCACCGTCCACGGCGGCCAGCCCGACCACCAGTGTGTCCAGCCTGACGGAGCGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162695.3 ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS CCA 90 bp | CGGTGTCCGCGCGCTCCGTCAGGCTGGACACACTGGTGGTCGGGCTaGCCGCCGTGGACGGTGACTCTGCTGAGCCGTGCGTGGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RCPRAPSGWTHWWSG*PPWTVTLLSRAWGS Trigger: GCTGCCCCACGCACGGCTCAGCAGAGTCACCGTCCACGGCGGCCAGCCCGACCACCAGTGTGTCCAGCCTGACGGAGCGCGCGGACACCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000162695.3 ENSMUST00000175898.4 ENSMUST00000176081.3 |
||
| CDS CCA 90 bp | TCGAAGTGCCGGTGTCCGCGCGCTCCGTCAGGCTGGACACACTGGTaGTCGGGCTGGCCGCCGTGGACGGTGACTCTGCTGAGCCGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SKCRCPRAPSGWTHW*SGWPPWTVTLLSRA Trigger: CGCACGGCTCAGCAGAGTCACCGTCCACGGCGGCCAGCCCGACCACCAGTGTGTCCAGCCTGACGGAGCGCGCGGACACCGGCACTTCGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162695.3 ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS CCA 90 bp | GGGGCGAGAGGATCGAAGTGCCGGTGTCCGCGCGCTCCGTCAGGCTaGACACACTGGTGGTCGGGCTGGCCGCCGTGGACGGTGACTCTG | + |
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Preference number: 5 (lower is better) Translates to: GARGSKCRCPRAPSG*THWWSGWPPWTVTL Trigger: CAGAGTCACCGTCCACGGCGGCCAGCCCGACCACCAGTGTGTCCAGCCTGACGGAGCGCGCGGACACCGGCACTTCGATCCTCTCGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| CDS CCA 90 bp | GGATCGAAGTGCCGGTGTCCGCGCGCTCCGTCAGGCTGGACACACTaGTGGTCGGGCTGGCCGCCGTGGACGGTGACTCTGCTGAGCCGT | + |
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Preference number: 5 (lower is better) Translates to: GSKCRCPRAPSGWTH*WSGWPPWTVTLLSR Trigger: ACGGCTCAGCAGAGTCACCGTCCACGGCGGCCAGCCCGACCACCAGTGTGTCCAGCCTGACGGAGCGCGCGGACACCGGCACTTCGATCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162695.3 ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS-3UTR CAA 90 bp | GGCCACAGCCGGCCAGGAAAGCTTGGGGCCAGCAGAGGAACGTGGTCAGCAAGGTTGCGCACGCGGTACTaGTCCACCGGGCCGAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: GHSRPGKLGASRGTWSARLRTRY*STGPSG Trigger: CCCGCTCGGCCCGGTGGACAAGTACCGCGTGCGCAA...CCTTGCTGACCACGTTCCTCTGCTGGCCCCAAGCTTTCCTGGCCGGCTGTGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| CDS CCA 90 bp | TTACCGAGAGGATCGAAGTGCCGGTGTCCGCGCGCTCCGTCAGGCTaGACACACTGGTGGTCGGGCTGGCCGCCGTGGACGGTGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPRGSKCRCPRAPSG*THWWSGWPPWTVTL Trigger: CAGAGTCACCGTCCACGGCGGCCAGCCCGACCACCAGTGTGTCCAGCCTGACGGAGCGCGCGGACACCGGCACTTCGATCCTCTCGGTAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS-3UTR CAA 90 bp | CCTCGGGAGTTGTGCGGCCACAGCCGGCCAGGAAAGCTTGGGGCCAGCAGAGGAATCGACTCGTGTTTGTaGATGGCCTCGCACGCCCCG | + |
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Preference number: 5 (lower is better) Translates to: PRELCGHSRPGKLGASRGIDSCL*MASHAP Trigger: CGGGGCGTGCGAGGCCATCAACAAACACGAGTCGAT...TCCTCTGCTGGCCCCAAGCTTTCCTGGCCGGCTGTGGCCGCACAACTCCCGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| CDS-3UTR CAA 90 bp | AGGTGGGGTGCCGGGTCCGTGGGAACCAAAAGGAGAAGCCGTGCTTGTCCTAGATGCTGGAGCCTGTTCTaGGCCGCCGCTGCGCGGTCG | + |
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Preference number: 5 (lower is better) Translates to: RWGAGSVGTKRRSRACPRCWSLF*AAAARS Trigger: CGACCGCGCAGCGGCGGCCAAGAACAGGCTCCAGCA...TCTAGGACAAGCACGGCTTCTCCTTTTGGTTCCCACGGACCCGGCACCCCACCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS-3UTR CAA 90 bp | GTACAAGAGTCTGAGACACCCCTTGCCCTGGGGGAACTAGAGCATGGCCACTGCTGCTGGAGCCTGTTCTaGGCCGCCGCTGCGCGGTCG | + |
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Preference number: 5 (lower is better) Translates to: VQESETPLALGELEHGHCCWSLF*AAAARS Trigger: CGACCGCGCAGCGGCGGCCAAGAACAGGCTCCAGCA...GCAGTGGCCATGCTCTAGTTCCCCCAGGGCAAGGGGTGTCTCAGACTCTTGTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| CDS CCA 90 bp | GCTATGCCCAGCCATCCCATGCGACTTGACTGCTTTGGCCATAGATaGGGGCGAGAGGATCGAAGTGCCGGTGTCCGCGCGCTCCGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AMPSHPMRLDCFGHR*GREDRSAGVRALRQ Trigger: CTGACGGAGCGCGCGGACACCGGCACTTCGATCCTCTCGCCCCCATCTATGGCCAAAGCAGTCAAGTCGCATGGGATGGCTGGGCATAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| CDS-3UTR CAA 90 bp | GGCCACAGCCGGCCAGGAAAGCTTGGGGCCAGCAGAGGAACGTGGTCAGCAAGGCTCCGAGTCCGCTCCTaGAAGCAATGGGTCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GHSRPGKLGASRGTWSARLRVRS*KQWVFC Trigger: GCAGAAGACCCATTGCTTCAAGGAGCGGACTCGGAG...CCTTGCTGACCACGTTCCTCTGCTGGCCCCAAGCTTTCCTGGCCGGCTGTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| CDS-3UTR CAA 90 bp | ATGCTTTCTGCCCGCAACATCAGCGTTTGTGACTGTCTGTTGGCGTCGCGGTCCTGCTGGAGCCTGTTCTaGGCCGCCGCTGCGCGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: MLSARNISVCDCLLASRSCWSLF*AAAARS Trigger: CGACCGCGCAGCGGCGGCCAAGAACAGGCTCCAGCA...GGACCGCGACGCCAACAGACAGTCACAAACGCTGATGTTGCGGGCAGAAAGCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS-3UTR CAA 90 bp | ACTAGCAGTGGGCTGGCAGAGGCTGGAGTCACTCCCCTGCCTCCACAGTCTCTCTGCTCCGGCGAGAAGTaGAGGGTGGGCAACTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TSSGLAEAGVTPLPPQSLCSGEK*RVGNWN Trigger: GTTCCAGTTGCCCACCCTCAACTTCTCGCCGGAGCA...GAGAGACTGTGGAGGCAGGGGAGTGACTCCAGCCTCTGCCAGCCCACTGCTAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| CDS-3UTR CAA 90 bp | CCAGACAGCCATCCCAGCCGGCTGGCTGGGACCAGGAAGGCTCAGTTCAGCTCATGCGACTTGACTGCTTaGGCCATAGATGGGGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: PDSHPSRLAGTRKAQFSSCDLTA*AIDGGE Trigger: CTCGCCCCCATCTATGGCCAAAGCAGTCAAGTCGCA...TGAGCTGAACTGAGCCTTCCTGGTCCCAGCCAGCCGGCTGGGATGGCTGTCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| CDS GCA 90 bp | ATACATCACATTCCGAGTCGCTGGAGGTTACCGAGAGGATCGAAGTaGCGGTGTCCGCGCGCTCCGTCAGGCTGGACACACTGGTGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: IHHIPSRWRLPRGSK*RCPRAPSGWTHWWS Trigger: CGACCACCAGTGTGTCCAGCCTGACGGAGCGCGCGGACACCGGCACTTCGATCCTCTCGGTAACCTCCAGCGACTCGGAATGTGATGTAT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS-3UTR CAA 90 bp | AGGTGGGGTGCCGGGTCCGTGGGAACCAAAAGGAGAAGCCGTGCTTGTCCTAGAATCGACTCGTGTTTGTaGATGGCCTCGCACGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RWGAGSVGTKRRSRACPRIDSCL*MASHAP Trigger: CGGGGCGTGCGAGGCCATCAACAAACACGAGTCGAT...TCTAGGACAAGCACGGCTTCTCCTTTTGGTTCCCACGGACCCGGCACCCCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS-3UTR CAA 90 bp | AGAATACTACGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCTTGCGCACGCGGTACTaGTCCACCGGGCCGAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RILRSHSLLSLATGSLSLLRTRY*STGPSG Trigger: CCCGCTCGGCCCGGTGGACAAGTACCGCGTGCGCAA...GAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCGTAGTATTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS-3UTR CAA 90 bp | ACTAGCAGTGGGCTGGCAGAGGCTGGAGTCACTCCCCTGCCTCCACAGTCTCTCGAGAATCGGCGAAGTTaGGCAACAAGAAGTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSSGLAEAGVTPLPPQSLENRRS*ATRSGR Trigger: CCTCCCACTTCTTGTTGCCAAACTTCGCCGATTCTC...GAGAGACTGTGGAGGCAGGGGAGTGACTCCAGCCTCTGCCAGCCCACTGCTAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| CDS-3UTR CAA 90 bp | GCAAGAAGCCCCCAGTCCACAGAGAAGTGGTCTCAACCCTCTGATGAGGAGTTGCTCGAGCCACATGGCTaGCAGCTTGCCGTGAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: ARSPQSTEKWSQPSDEELLEPHG*QLAVRL Trigger: GAGTCTCACGGCAAGCTGCAAGCCATGTGGCTCGAG...CAACTCCTCATCAGAGGGTTGAGACCACTTCTCTGTGGACTGGGGGCTTCTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| CDS-3UTR CAA 90 bp | CGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCTTTCTCTCTTGCTCCGGCGAGAAGTaGAGGGTGGGCAACTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RSHSLLSLATGSLSLFLSCSGEK*RVGNWN Trigger: GTTCCAGTTGCCCACCCTCAACTTCTCGCCGGAGCA...AGAGAGAAAGAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS-3UTR CAA 90 bp | CGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCTTTCTCTCTCTCGAGCCACATGGCTaGCAGCTTGCCGTGAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: RSHSLLSLATGSLSLFLSLEPHG*QLAVRL Trigger: GAGTCTCACGGCAAGCTGCAAGCCATGTGGCTCGAG...AGAGAGAAAGAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS-3UTR CAA 90 bp | GTTGTGTATCTCACCAGGGATAATCAACTTCTGGGCAGCCAATTTTGGCAGGATTTGCGCACGCGGTACTaGTCCACCGGGCCGAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: VVYLTRDNQLLGSQFWQDLRTRY*STGPSG Trigger: CCCGCTCGGCCCGGTGGACAAGTACCGCGTGCGCAA...ATCCTGCCAAAATTGGCTGCCCAGAAGTTGATTATCCCTGGTGAGATACACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| CDS-3UTR CAA 90 bp | TACCAAACATTCCAAGGGCTCACAAGCGCCGCGAGATGCAGCAAATCCAGGGTAAGGATCGACTCGTGTTaGTTGATGGCCTCGCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: YQTFQGLTSAARCSKSRVRIDSC*LMASHA Trigger: GGCGTGCGAGGCCATCAACAAACACGAGTCGATCCT...TACCCTGGATTTGCTGCATCTCGCGGCGCTTGTGAGCCCTTGGAATGTTTGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| CDS-3UTR CAA 90 bp | CACCGTGGCGGCTTCTGTGCCATTTCTCTGAAGTCAGTTGTGTATCTCACCAGGCTCCGAGTCCGCTCCTaGAAGCAATGGGTCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HRGGFCAISLKSVVYLTRLRVRS*KQWVFC Trigger: GCAGAAGACCCATTGCTTCAAGGAGCGGACTCGGAG...CCTGGTGAGATACACAACTGACTTCAGAGAAATGGCACAGAAGCCGCCACGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| CDS-3UTR CAA 90 bp | AGAATACTACGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCCTCCGAGTCCGCTCCTaGAAGCAATGGGTCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RILRSHSLLSLATGSLSLLRVRS*KQWVFC Trigger: GCAGAAGACCCATTGCTTCAAGGAGCGGACTCGGAG...GAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCGTAGTATTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS-3UTR CAA 90 bp | CGGTCTCACTCTCTGCTTTCACTAGCGACAGGGTCCCTCTCTCTCTTTCTCTCTGAGAATCGGCGAAGTTaGGCAACAAGAAGTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSHSLLSLATGSLSLFLSENRRS*ATRSGR Trigger: CCTCCCACTTCTTGTTGCCAAACTTCGCCGATTCTC...AGAGAGAAAGAGAGAGAGGGACCCTGTCGCTAGTGAAAGCAGAGAGTGAGACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS-3UTR CAA 90 bp | TACCAAACATTCCAAGGGCTCACAAGCGCCGCGAGATGCAGCAAATCCAGGGTAGAGAATCGGCGAAGTTaGGCAACAAGAAGTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YQTFQGLTSAARCSKSRVENRRS*ATRSGR Trigger: CCTCCCACTTCTTGTTGCCAAACTTCGCCGATTCTC...TACCCTGGATTTGCTGCATCTCGCGGCGCTTGTGAGCCCTTGGAATGTTTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176081.3 |
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| CDS-3UTR CAA 90 bp | CACCGTGGCGGCTTCTGTGCCATTTCTCTGAAGTCAGTTGTGTATCTCACCAGGGCCATCCCATGCGACTaGACTGCTTTGGCCATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HRGGFCAISLKSVVYLTRAIPCD*TALAID Trigger: ATCTATGGCCAAAGCAGTCAAGTCGCATGGGATGGC...CCTGGTGAGATACACAACTGACTTCAGAGAAATGGCACAGAAGCCGCCACGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| CDS-3UTR CAA 90 bp | GTTGTGTATCTCACCAGGGATAATCAACTTCTGGGCAGCCAATTTTGGCAGGATATCGACTCGTGTTTGTaGATGGCCTCGCACGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VVYLTRDNQLLGSQFWQDIDSCL*MASHAP Trigger: CGGGGCGTGCGAGGCCATCAACAAACACGAGTCGAT...ATCCTGCCAAAATTGGCTGCCCAGAAGTTGATTATCCCTGGTGAGATACACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| CDS-3UTR CAA 90 bp | GAGGGATGCAGAGAAGAGAATTGGATGTTACTCCTCAAACGGTGTGTACCCTTAAGGATCGACTCGTGTTaGTTGATGGCCTCGCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: EGCREENWMLLLKRCVPLRIDSC*LMASHA Trigger: GGCGTGCGAGGCCATCAACAAACACGAGTCGATCCT...TAAGGGTACACACCGTTTGAGGAGTAACATCCAATTCTCTTCTCTGCATCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| CDS-3UTR CAA 90 bp | GCCGTGGTAGTAGGTGGTGGTGGGGTTGTTGATGGTTTGAGGTTAATTTATTTTAGGATCGACTCGTGTTaGTTGATGGCCTCGCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVVVGGGGVVDGLRLIYFRIDSC*LMASHA Trigger: GGCGTGCGAGGCCATCAACAAACACGAGTCGATCCT...AAAATAAATTAACCTCAAACCATCAACAACCCCACCACCACCTACTACCACGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS TCA 72 bp | TCGGCCAGCGAGCGCATCCCGCTCGGCCCGATGGCCTaGTGCTGGAGCCTGTTCTTGGCCGCCGCTGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SASERIPLGPMA*CWSLFLAAAAR Trigger: CCGCGCAGCGGCGGCCAAGAACAGGCTCCAGCATCAGGCCATCGGGCCGAGCGGGATGCGCTCGCTGGCCGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162695.3 ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS CCA 72 bp | CGGGCTCGGCCAGCGAGCGCATCCCGCTCGGCCCGATaGCCTGATGCTGGAGCCTGTTCTTGGCCGCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RARPASASRSAR*PDAGACSWPPL Trigger: CAGCGGCGGCCAAGAACAGGCTCCAGCATCAGGCCATCGGGCCGAGCGGGATGCGCTCGCTGGCCGAGCCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162695.3 ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS CCA 72 bp | CGGTGTCCGCGCGCTCCGTCAGGCTGGACACACTGGTaGTCGGGCTGGCCGCCGTGGACGGTGACTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RCPRAPSGWTHW*SGWPPWTVTLL Trigger: CAGCAGAGTCACCGTCCACGGCGGCCAGCCCGACCACCAGTGTGTCCAGCCTGACGGAGCGCGCGGACACCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162695.3 ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS CCA 72 bp | TGCCGGTGTCCGCGCGCTCCGTCAGGCTGGACACACTaGTGGTCGGGCTGGCCGCCGTGGACGGTGACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CRCPRAPSGWTH*WSGWPPWTVTL Trigger: CAGAGTCACCGTCCACGGCGGCCAGCCCGACCACCAGTGTGTCCAGCCTGACGGAGCGCGCGGACACCGGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162695.3 ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS CCA 72 bp | GGATCGAAGTGCCGGTGTCCGCGCGCTCCGTCAGGCTaGACACACTGGTGGTCGGGCTGGCCGCCGTGGACG | + |
|
Preference number: 6 (lower is better) Translates to: GSKCRCPRAPSG*THWWSGWPPWT Trigger: CGTCCACGGCGGCCAGCCCGACCACCAGTGTGTCCAGCCTGACGGAGCGCGCGGACACCGGCACTTCGATCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162695.3 ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS GCA 72 bp | ATTCCGAGTCGCTGGAGGTTACCGAGAGGATCGAAGTaGCGGTGTCCGCGCGCTCCGTCAGGCTGGACACAC | + |
|
Preference number: 6 (lower is better) Translates to: IPSRWRLPRGSK*RCPRAPSGWTH Trigger: GTGTGTCCAGCCTGACGGAGCGCGCGGACACCGGCACTTCGATCCTCTCGGTAACCTCCAGCGACTCGGAAT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS CCA 72 bp | AGCCATCCCATGCGACTTGACTGCTTTGGCCATAGATaGGGGCGAGAGGATCGAAGTGCCGGTGTCCGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: SHPMRLDCFGHR*GREDRSAGVRA Trigger: CGCGCGGACACCGGCACTTCGATCCTCTCGCCCCCATCTATGGCCAAAGCAGTCAAGTCGCATGGGATGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| CDS GCA 72 bp | AGCTCCTTCTCCGGGCAGCTATGCCCAGCCATCCCATaGGACTTGACTGCTTTGGCCATAGATGGGGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSFSGQLCPAIP*DLTALAIDGGE Trigger: CTCGCCCCCATCTATGGCCAAAGCAGTCAAGTCGCATGGGATGGCTGGGCATAGCTGCCCGGAGAAGGAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| CDS TCA 72 bp | CCGCCGCCGCTACTCGCCAGAAGTAGGGAGCAGTGGTaGGAATCGGCGAAGTTTGGCAACAAGAAGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PPPLLARSREQW*ESAKFGNKKWE Trigger: CTCCCACTTCTTGTTGCCAAACTTCGCCGATTCTCACCACTGCTCCCTACTTCTGGCGAGTAGCGGCGGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000162695.3 ENSMUST00000175898.4 ENSMUST00000176081.3 |
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| CDS CAA 72 bp | CAGCTATGCCCAGCCATCCCATGCGACTTGACTGCTTaGGCCATAGATGGGGGCGAGAGGATCGAAGTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: QLCPAIPCDLTA*AIDGGERIEVP Trigger: CGGCACTTCGATCCTCTCGCCCCCATCTATGGCCAAAGCAGTCAAGTCGCATGGGATGGCTGGGCATAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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| CDS CAA 72 bp | TTCTCCGGGCAGCTATGCCCAGCCATCCCATGCGACTaGACTGCTTTGGCCATAGATGGGGGCGAGAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: FSGQLCPAIPCD*TALAIDGGERI Trigger: GATCCTCTCGCCCCCATCTATGGCCAAAGCAGTCAAGTCGCATGGGATGGCTGGGCATAGCTGCCCGGAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162695.3 |
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