Pregenerated sensors for SIX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024134Ensembl transcript IDs: ENSMUST00000024947.8, ENSMUST00000163568.4
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAACATTCACATGAGGGCGTAAAATGGAACAGGCAAGTCTGCGGCTaGGGAGGCACTCTGGGCTGGGAGCACGGAGGTCACAGTCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: EHSHEGVKWNRQVCG*GGTLGWEHGGHSPR Trigger: CCTGGGACTGTGACCTCCGTGCTCCCAGCCCAGAGTGCCTCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| 3UTR GCA 90 bp | CCCGACGAACATTCACATGAGGGCGTAAAATGGAACAGGCAAGTCTaGGGCTGCGGAGGCACTCTGGGCTGGGAGCACGGAGGTCACAGT | + |
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Preference number: 1 (lower is better) Translates to: PDEHSHEGVKWNRQV*GCGGTLGWEHGGHS Trigger: ACTGTGACCTCCGTGCTCCCAGCCCAGAGTGCCTCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTCGTCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| 3UTR CCA 90 bp | AAAGCAGAAATATCTCCCGACGAACATTCACATGAGGGCGTAAAATaGAACAGGCAAGTCTGCGGCTGCGGAGGCACTCTGGGCTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: KAEISPDEHSHEGVK*NRQVCGCGGTLGWE Trigger: CTCCCAGCCCAGAGTGCCTCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTCGTCGGGAGATATTTCTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| 3UTR CCA 90 bp | GTTGAGAAAGGAACTCAAATAGATGACACCAGAAGGAAGAAAGACTaGGGATACAATGTGAGAAATGAGAGAGAGAGAGAGAGAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: VEKGTQIDDTRRKKD*GYNVRNERERERER Trigger: TCTCTCTCTCTCTCTCTCTCTCTCATTTCTCACATTGTATCCCCAGTCTTTCTTCCTTCTGGTGTCATCTATTTGAGTTCCTTTCTCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163568.4 |
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| 3UTR-3UTR TCA 90 bp | CAAGTCTGCGGCTGCGGAGGCACTCTGGGCTGGGAGCACGGAGGTCACAGTCCCCGACGAACATTCACATaGGGGCGTAAAATGGAACAG | + |
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Preference number: 2 (lower is better) Translates to: QVCGCGGTLGWEHGGHSPRRTFT*GRKMEQ Trigger: CTGTTCCATTTTACGCCCTCATGTGAATGTTCGTCG...GGGACTGTGACCTCCGTGCTCCCAGCCCAGAGTGCCTCCGCAGCCGCAGACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| 3UTR-3UTR TCA 90 bp | CAAGTCTGCGGCTGCGGAGGCACTCTGGGCTGGGAGCACGGAGGTCACAGTCCCATACAATGTGAGAAATaGGAGAGAGAGAGAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: QVCGCGGTLGWEHGGHSPIQCEK*ERERER Trigger: TCTCTCTCTCTCTCTCTCTCATTTCTCACATTGTAT...GGGACTGTGACCTCCGTGCTCCCAGCCCAGAGTGCCTCCGCAGCCGCAGACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163568.4 |
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| 3UTR-3UTR TCA 90 bp | GACGAACATTCACATGAGGGCGTAAAATGGAACAGGCAAGTCTGCGGCTGCGGAGGAGGGAGATGTCTTTaGGGACCGAAGACCCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: DEHSHEGVKWNRQVCGCGGGRCL*GPKTQN Trigger: ATTCTGGGTCTTCGGTCCTCAAAGACATCTCCCTCC...TCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163568.4 |
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| 3UTR-3UTR GCA 90 bp | GACGAACATTCACATGAGGGCGTAAAATGGAACAGGCAAGTCTGCGGCTGCGGACAGGTGCTTCTGGGGTaGAGCCTTTCTTGCTCATTT | + |
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Preference number: 2 (lower is better) Translates to: DEHSHEGVKWNRQVCGCGQVLLG*SLSCSF Trigger: AAATGAGCAAGAAAGGCTGCACCCCAGAAGCACCTG...TCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163568.4 |
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| 3UTR-3UTR TCA 90 bp | GAACATTCACATGAGGGCGTAAAATGGAACAGGCAAGTCTGCGGCTGCGGAGGCACTGGGGATACAATGTaGGAAATGAGAGAGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: EHSHEGVKWNRQVCGCGGTGDTM*EMRERE Trigger: CTCTCTCTCTCTCATTTCTCACATTGTATCCCCAGT...GCCTCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163568.4 |
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| 3UTR-3UTR TCA 90 bp | GACGAACATTCACATGAGGGCGTAAAATGGAACAGGCAAGTCTGCGGCTGCGGAAGGAACTCAAATAGATaGCACCAGAAGGAAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: DEHSHEGVKWNRQVCGCGRNSNR*HQKEER Trigger: TCTTTCTTCCTTCTGGTGTCATCTATTTGAGTTCCT...TCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTCGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163568.4 |
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| 3UTR-3UTR GCA 90 bp | GACGAACATTCACATGAGGGCGTAAAATGGAACAGGCAAGTCTGCGGCTGCGGATATAATTTATTCCCTTaGCTAGTTCAAGACTCGGTC | + |
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Preference number: 2 (lower is better) Translates to: DEHSHEGVKWNRQVCGCGYNLFP*LVQDSV Trigger: GACCGAGTCTTGAACTAGGCAAGGGAATAAATTATA...TCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTCGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| 3UTR CCA 72 bp | ATATCTCCCGACGAACATTCACATGAGGGCGTAAAATaGAACAGGCAAGTCTGCGGCTGCGGAGGCACTCTG | + |
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Preference number: 3 (lower is better) Translates to: ISPDEHSHEGVK*NRQVCGCGGTL Trigger: CAGAGTGCCTCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTCGTCGGGAGATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| 3UTR TCA 72 bp | CACCTTAGGCTCACACTGAGAGGAGGGAGATGTCTTTaGGGACCGAAGACCCAGAATGTCTACCTCCGTTCA | + |
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Preference number: 3 (lower is better) Translates to: HLRLTLRGGRCL*GPKTQNVYLRS Trigger: TGAACGGAGGTAGACATTCTGGGTCTTCGGTCCTCAAAGACATCTCCCTCCTCTCAGTGTGAGCCTAAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163568.4 |
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| 3UTR CCA 72 bp | GGTGCAGCCTTTCTTGCTCATTTGTTAGTCAGAAGCTaGCACCTTAGGCTCACACTGAGAGGAGGGAGATGT | + |
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Preference number: 3 (lower is better) Translates to: GAAFLAHLLVRS*HLRLTLRGGRC Trigger: ACATCTCCCTCCTCTCAGTGTGAGCCTAAGGTGCCAGCTTCTGACTAACAAATGAGCAAGAAAGGCTGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163568.4 |
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| 3UTR GCA 72 bp | AAAATCGGGGTGGTGGTGGCTTATAATTTATTCCCTTaGCTAGTTCAAGACTCGGTCTCTGGCCTCCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: KIGVVVAYNLFP*LVQDSVSGLQR Trigger: CCTTTGGAGGCCAGAGACCGAGTCTTGAACTAGGCAAGGGAATAAATTATAAGCCACCACCACCCCGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| 3UTR GCA 72 bp | AGAGAGAGAGAAATGAGAATTCAGGTGCTTCTGGGGTaGAGCCTTTCTTGCTCATTTGTTAGTCAGAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: REREMRIQVLLG*SLSCSFVSQKL Trigger: CAGCTTCTGACTAACAAATGAGCAAGAAAGGCTGCACCCCAGAAGCACCTGAATTCTCATTTCTCTCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163568.4 |
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| CDS-3UTR TCA 90 bp | GTCTGCGGCTGCGGAGGCACTCTGGGCTGGGAGCACGGAGGTCACAGTCCCAGGGGGGCGGCGGCGGGCTaGGCAACAGAGCGGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: VCGCGGTLGWEHGGHSPRGAAAG*ATERDW Trigger: CCAGTCCCGCTCTGTTGCTCAGCCCGCCGCCGCCCC...CCTGGGACTGTGACCTCCGTGCTCCCAGCCCAGAGTGCCTCCGCAGCCGCAGAC 73% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR TCA 90 bp | CAAGTCTGCGGCTGCGGAGGCACTCTGGGCTGGGAGCACGGAGGTCACAGTCCCGGGGCGGCGGCGGGCTaGGCAACAGAGCGGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: QVCGCGGTLGWEHGGHSPGAAAG*ATERDW Trigger: CCAGTCCCGCTCTGTTGCTCAGCCCGCCGCCGCCCC...GGGACTGTGACCTCCGTGCTCCCAGCCCAGAGTGCCTCCGCAGCCGCAGACTTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CCA 90 bp | GTCTGCGGCTGCGGAGGCACTCTGGGCTGGGAGCACGGAGGTCACAGTCCCAGGTGTTCTCCCTTTCCTTaGCCTCGGCCGCCCTGTCGC | + |
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Preference number: 4 (lower is better) Translates to: VCGCGGTLGWEHGGHSPRCSPFP*PRPPCR Trigger: GCGACAGGGCGGCCGAGGCCAAGGAAAGGGAGAACA...CCTGGGACTGTGACCTCCGTGCTCCCAGCCCAGAGTGCCTCCGCAGCCGCAGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR TCA 90 bp | GTCTGCGGCTGCGGAGGCACTCTGGGCTGGGAGCACGGAGGTCACAGTCCCAGGTGGCCGACATGGGGTTaGGTATGGAGTCCTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VCGCGGTLGWEHGGHSPRWPTWG*VWSPAG Trigger: GCCTGCAGGACTCCATACTCAACCCCATGTCGGCCA...CCTGGGACTGTGACCTCCGTGCTCCCAGCCCAGAGTGCCTCCGCAGCCGCAGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR GCA 90 bp | GTCTGCGGCTGCGGAGGCACTCTGGGCTGGGAGCACGGAGGTCACAGTCCCAGGCCAGCGGGTTGTGGCTaGTGGAATTGGAGTTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: VCGCGGTLGWEHGGHSPRPAGCG*WNWSSR Trigger: GCGAGAACTCCAATTCCAGCAGCCACAACCCGCTGG...CCTGGGACTGTGACCTCCGTGCTCCCAGCCCAGAGTGCCTCCGCAGCCGCAGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR GCA 90 bp | CAAGTCTGCGGCTGCGGAGGCACTCTGGGCTGGGAGCACGGAGGTCACAGTCCCGCCTTGAGCCACAACTaGTGCAGCTTGGCGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: QVCGCGGTLGWEHGGHSPALSHN*CSLAWL Trigger: CAACCACGCCAAGCTGCAGCAGTTGTGGCTCAAGGC...GGGACTGTGACCTCCGTGCTCCCAGCCCAGAGTGCCTCCGCAGCCGCAGACTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR GCA 90 bp | GTCTGCGGCTGCGGAGGCACTCTGGGCTGGGAGCACGGAGGTCACAGTCCCAGGTCTCATCCTCGGAACTaGCTAGCACCGACTTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VCGCGGTLGWEHGGHSPRSHPRN*LAPTCH Trigger: GTGGCAAGTCGGTGCTAGGCAGTTCCGAGGATGAGA...CCTGGGACTGTGACCTCCGTGCTCCCAGCCCAGAGTGCCTCCGCAGCCGCAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CCA 90 bp | GAATCTATCGCCCTCCCACACCGCTTCATCAAGCACGGAAAGCAAGCGCCCGGACTCGCGCTTCTCTCGTaGCGACGGGTAGGGGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: ESIALPHRFIKHGKQAPGLALLS*RRVGVV Trigger: CACAACCCCTACCCGTCGCCACGAGAGAAGCGCGAG...TCCGGGCGCTTGCTTTCCGTGCTTGATGAAGCGGTGTGGGAGGGCGATAGATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR GCA 90 bp | GAACATTCACATGAGGGCGTAAAATGGAACAGGCAAGTCTGCGGCTGCGGAGGCCCAGCCGCTCGATGTTaGCGCCCTGCTGCAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: EHSHEGVKWNRQVCGCGGPAARC*RPAAAP Trigger: AGGTGCTGCAGCAGGGCGGCAACATCGAGCGGCTGG...GCCTCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR GCA 90 bp | GACTCCAGAATCTATCGCCCTCCCACACCGCTTCATCAAGCACGGAAAGCAAGCCCAGCCGCTCGATGTTaGCGCCCTGCTGCAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: DSRIYRPPTPLHQARKASPAARC*RPAAAP Trigger: AGGTGCTGCAGCAGGGCGGCAACATCGAGCGGCTGG...GCTTGCTTTCCGTGCTTGATGAAGCGGTGTGGGAGGGCGATAGATTCTGGAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR TCA 90 bp | GAATCTATCGCCCTCCCACACCGCTTCATCAAGCACGGAAAGCAAGCGCCCGGACGATGTAGTGCGCCTTaGGCCACAACTGCTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: ESIALPHRFIKHGKQAPGRCSAP*ATTAAA Trigger: AGCTGCAGCAGTTGTGGCTCAAGGCGCACTACATCG...TCCGGGCGCTTGCTTTCCGTGCTTGATGAAGCGGTGTGGGAGGGCGATAGATTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR GCA 90 bp | GACTCCAGAATCTATCGCCCTCCCACACCGCTTCATCAAGCACGGAAAGCAAGCTCGATGTTGCCGCCCTaGTGCAGCACCTCGCACACG | + |
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Preference number: 4 (lower is better) Translates to: DSRIYRPPTPLHQARKASSMLPP*CSTSHT Trigger: CGTGTGCGAGGTGCTGCAGCAGGGCGGCAACATCGA...GCTTGCTTTCCGTGCTTGATGAAGCGGTGTGGGAGGGCGATAGATTCTGGAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CCA 90 bp | GAACATTCACATGAGGGCGTAAAATGGAACAGGCAAGTCTGCGGCTGCGGAGGCCTCGCGCTTCTCTCGTaGCGACGGGTAGGGGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: EHSHEGVKWNRQVCGCGGLALLS*RRVGVV Trigger: CACAACCCCTACCCGTCGCCACGAGAGAAGCGCGAG...GCCTCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR GCA 90 bp | AGAATCTATCGCCCTCCCACACCGCTTCATCAAGCACGGAAAGCAAGCGCCCGGTCTCATCCTCGGAACTaGCTAGCACCGACTTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RIYRPPTPLHQARKASARSHPRN*LAPTCH Trigger: GTGGCAAGTCGGTGCTAGGCAGTTCCGAGGATGAGA...CCGGGCGCTTGCTTTCCGTGCTTGATGAAGCGGTGTGGGAGGGCGATAGATTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CCA 90 bp | AGAATCTATCGCCCTCCCACACCGCTTCATCAAGCACGGAAAGCAAGCGCCCGGGCGGGTTGTGGCTGCTaGAATTGGAGTTCTCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RIYRPPTPLHQARKASARAGCGC*NWSSRC Trigger: ACAGCGAGAACTCCAATTCCAGCAGCCACAACCCGC...CCGGGCGCTTGCTTTCCGTGCTTGATGAAGCGGTGTGGGAGGGCGATAGATTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR TCA 90 bp | AGACTCCAGAATCTATCGCCCTCCCACACCGCTTCATCAAGCACGGAAAGCAAGTGGCCGACATGGGGTTaGGTATGGAGTCCTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RLQNLSPSHTASSSTESKWPTWG*VWSPAG Trigger: GCCTGCAGGACTCCATACTCAACCCCATGTCGGCCA...CTTGCTTTCCGTGCTTGATGAAGCGGTGTGGGAGGGCGATAGATTCTGGAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CCA 90 bp | GAACATTCACATGAGGGCGTAAAATGGAACAGGCAAGTCTGCGGCTGCGGAGGCACAACTGCTGCAGCTTaGCGTGGTTGTGCGGCGAGA | + |
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Preference number: 4 (lower is better) Translates to: EHSHEGVKWNRQVCGCGGTTAAA*RGCAAR Trigger: TCTCGCCGCACAACCACGCCAAGCTGCAGCAGTTGT...GCCTCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR GCA 90 bp | TTGTTAGTCAGAAGCTGGCACCTTAGGCTCACACTGAGAGGAGGGAGATGTCTTTCGATGTTGCCGCCCTaGTGCAGCACCTCGCACACG | + |
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Preference number: 4 (lower is better) Translates to: LLVRSWHLRLTLRGGRCLSMLPP*CSTSHT Trigger: CGTGTGCGAGGTGCTGCAGCAGGGCGGCAACATCGA...AAGACATCTCCCTCCTCTCAGTGTGAGCCTAAGGTGCCAGCTTCTGACTAACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163568.4 |
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| CDS-3UTR GCA 90 bp | GAACATTCACATGAGGGCGTAAAATGGAACAGGCAAGTCTGCGGCTGCGGAGGCTTGAGCCACAACTGCTaGAGCTTGGCGTGGTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: EHSHEGVKWNRQVCGCGGLSHNC*SLAWLC Trigger: GCACAACCACGCCAAGCTGCAGCAGTTGTGGCTCAA...GCCTCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CCA 90 bp | GACGAACATTCACATGAGGGCGTAAAATGGAACAGGCAAGTCTGCGGCTGCGGAACAACTGCTGCAGCTTaGCGTGGTTGTGCGGCGAGA | + |
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Preference number: 4 (lower is better) Translates to: DEHSHEGVKWNRQVCGCGTTAAA*RGCAAR Trigger: TCTCGCCGCACAACCACGCCAAGCTGCAGCAGTTGT...TCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CCA 90 bp | GAACATTCACATGAGGGCGTAAAATGGAACAGGCAAGTCTGCGGCTGCGGAGGCGAAGCCAGCGGGTTGTaGCTGCTGGAATTGGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: EHSHEGVKWNRQVCGCGGEASGL*LLELEF Trigger: GAACTCCAATTCCAGCAGCCACAACCCGCTGGCTTC...GCCTCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CCA 90 bp | GACGAACATTCACATGAGGGCGTAAAATGGAACAGGCAAGTCTGCGGCTGCGGAGCGGGTTGTGGCTGCTaGAATTGGAGTTCTCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: DEHSHEGVKWNRQVCGCGAGCGC*NWSSRC Trigger: ACAGCGAGAACTCCAATTCCAGCAGCCACAACCCGC...TCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CCA 90 bp | AGACTCCAGAATCTATCGCCCTCCCACACCGCTTCATCAAGCACGGAAAGCAAGGAAGCCAGCGGGTTGTaGCTGCTGGAATTGGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: RLQNLSPSHTASSSTESKEASGL*LLELEF Trigger: GAACTCCAATTCCAGCAGCCACAACCCGCTGGCTTC...CTTGCTTTCCGTGCTTGATGAAGCGGTGTGGGAGGGCGATAGATTCTGGAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATATTTATAAAGGAGGGAAAGCCTTGAGCCACAACTaGTGCAGCTTGGCGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: RERERERERERDIYKGGKALSHN*CSLAWL Trigger: CAACCACGCCAAGCTGCAGCAGTTGTGGCTCAAGGC...TTTCCCTCCTTTATAAATATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATATTTATAAAGGAGGGAAACCAGCGGGTTGTGGCTaGTGGAATTGGAGTTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: RERERERERERDIYKGGKPAGCG*WNWSSR Trigger: GCGAGAACTCCAATTCCAGCAGCCACAACCCGCTGG...TTTCCCTCCTTTATAAATATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS CCA 90 bp | GGGGGCGGCGGCGGGCTGAGCAACAGAGCGGGACTGGACGACGAGTaGTCTGGAGTCCCCGACGGCGTCTTCTCATCCTCGGAACTGCCT | + |
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Preference number: 5 (lower is better) Translates to: GGGGGLSNRAGLDDE*SGVPDGVFSSSELP Trigger: AGGCAGTTCCGAGGATGAGAAGACGCCGTCGGGGACTCCAGACCACTCGTCGTCCAGTCCCGCTCTGTTGCTCAGCCCGCCGCCGCCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CAA 90 bp | GTCTGCGGCTGCGGAGGCACTCTGGGCTGGGAGCACGGAGGTCACAGTCCCAGGAAGGCCACCACGGCCTaGGCCTTGAGCACGCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: VCGCGGTLGWEHGGHSPRKATTA*ALSTLS Trigger: TGAAAGCGTGCTCAAGGCCAAGGCCGTGGTGGCCTT...CCTGGGACTGTGACCTCCGTGCTCCCAGCCCAGAGTGCCTCCGCAGCCGCAGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CAA 90 bp | CAAGTCTGCGGCTGCGGAGGCACTCTGGGCTGGGAGCACGGAGGTCACAGTCCCCACAACTGCTGCAGCTaGGCGTGGTTGTGCGGCGAG | + |
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Preference number: 5 (lower is better) Translates to: QVCGCGGTLGWEHGGHSPHNCCS*AWLCGE Trigger: CTCGCCGCACAACCACGCCAAGCTGCAGCAGTTGTG...GGGACTGTGACCTCCGTGCTCCCAGCCCAGAGTGCCTCCGCAGCCGCAGACTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS CCA 90 bp | CATGGGGTTGAGTATGGAGTCCTGCAGGCTGTGGTGATGCTGCAGTaGGTCCGCGCCGCCTCCACCGGGCACTGGTACGGGTACTGCGCT | + |
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Preference number: 5 (lower is better) Translates to: HGVEYGVLQAVVMLQ*VRAASTGHWYGYCA Trigger: AGCGCAGTACCCGTACCAGTGCCCGGTGGAGGCGGCGCGGACCCACTGCAGCATCACCACAGCCTGCAGGACTCCATACTCAACCCCATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CAA 90 bp | CAAGTCTGCGGCTGCGGAGGCACTCTGGGCTGGGAGCACGGAGGTCACAGTCCCACCACGGCCTTGGCCTaGAGCACGCTTTCATTCTTG | + |
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Preference number: 5 (lower is better) Translates to: QVCGCGGTLGWEHGGHSPTTALA*STLSFL Trigger: CAAGAATGAAAGCGTGCTCAAGGCCAAGGCCGTGGT...GGGACTGTGACCTCCGTGCTCCCAGCCCAGAGTGCCTCCGCAGCCGCAGACTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CAA 90 bp | GAATCTATCGCCCTCCCACACCGCTTCATCAAGCACGGAAAGCAAGCGCCCGGACTGTTCTCCCTTTCCTaGGCCTCGGCCGCCCTGTCG | + |
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Preference number: 5 (lower is better) Translates to: ESIALPHRFIKHGKQAPGLFSLS*ASAALS Trigger: CGACAGGGCGGCCGAGGCCAAGGAAAGGGAGAACAG...TCCGGGCGCTTGCTTTCCGTGCTTGATGAAGCGGTGTGGGAGGGCGATAGATTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS CCA 90 bp | AGCACCGACTTGCCACTGCCATTGAGCGAGGAAGCCAGCGGGTTGTaGCTGCTGGAATTGGAGTTCTCGCTGTTCTCCCTTTCCTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: STDLPLPLSEEASGL*LLELEFSLFSLSLA Trigger: GGCCAAGGAAAGGGAGAACAGCGAGAACTCCAATTCCAGCAGCCACAACCCGCTGGCTTCCTCGCTCAATGGCAGTGGCAAGTCGGTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CAA 90 bp | AGAATCTATCGCCCTCCCACACCGCTTCATCAAGCACGGAAAGCAAGCGCCCGGAGCACGCTTTCATTCTaGTGGAGGTGCTCGCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: RIYRPPTPLHQARKASARSTLSF*WRCSQA Trigger: CGCCTGCGAGCACCTCCACAAGAATGAAAGCGTGCT...CCGGGCGCTTGCTTTCCGTGCTTGATGAAGCGGTGTGGGAGGGCGATAGATTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CAA 90 bp | AGACTCCAGAATCTATCGCCCTCCCACACCGCTTCATCAAGCACGGAAAGCAAGCTGTTCTCCCTTTCCTaGGCCTCGGCCGCCCTGTCG | + |
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Preference number: 5 (lower is better) Translates to: RLQNLSPSHTASSSTESKLFSLS*ASAALS Trigger: CGACAGGGCGGCCGAGGCCAAGGAAAGGGAGAACAG...CTTGCTTTCCGTGCTTGATGAAGCGGTGTGGGAGGGCGATAGATTCTGGAGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CAA 90 bp | GAACATTCACATGAGGGCGTAAAATGGAACAGGCAAGTCTGCGGCTGCGGAGGCCCCAGGTCCACAAGGTaGGCCGACATGGGGTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: EHSHEGVKWNRQVCGCGGPRSTR*ADMGLS Trigger: ACTCAACCCCATGTCGGCCAACCTTGTGGACCTGGG...GCCTCCGCAGCCGCAGACTTGCCTGTTCCATTTTACGCCCTCATGTGAATGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CAA 90 bp | GACTCCAGAATCTATCGCCCTCCCACACCGCTTCATCAAGCACGGAAAGCAAGCCCCAGGTCCACAAGGTaGGCCGACATGGGGTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: DSRIYRPPTPLHQARKASPRSTR*ADMGLS Trigger: ACTCAACCCCATGTCGGCCAACCTTGTGGACCTGGG...GCTTGCTTTCCGTGCTTGATGAAGCGGTGTGGGAGGGCGATAGATTCTGGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS TCA 90 bp | TCTTCTCATCCTCGGAACTGCCTAGCACCGACTTGCCACTGCCATTaGGCGAGGAAGCCAGCGGGTTGTGGCTGCTGGAATTGGAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SSHPRNCLAPTCHCH*ARKPAGCGCWNWSS Trigger: AGAACTCCAATTCCAGCAGCCACAACCCGCTGGCTTCCTCGCTCAATGGCAGTGGCAAGTCGGTGCTAGGCAGTTCCGAGGATGAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CAA 90 bp | AGAATCTATCGCCCTCCCACACCGCTTCATCAAGCACGGAAAGCAAGCGCCCGGTTGTGGCTGCTGGAATaGGAGTTCTCGCTGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RIYRPPTPLHQARKASARLWLLE*EFSLFS Trigger: GGAGAACAGCGAGAACTCCAATTCCAGCAGCCACAA...CCGGGCGCTTGCTTTCCGTGCTTGATGAAGCGGTGTGGGAGGGCGATAGATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS-3UTR CAA 90 bp | TTGTTAGTCAGAAGCTGGCACCTTAGGCTCACACTGAGAGGAGGGAGATGTCTTTTGTGGCTGCTGGAATaGGAGTTCTCGCTGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LLVRSWHLRLTLRGGRCLLWLLE*EFSLFS Trigger: GGAGAACAGCGAGAACTCCAATTCCAGCAGCCACAA...AAGACATCTCCCTCCTCTCAGTGTGAGCCTAAGGTGCCAGCTTCTGACTAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163568.4 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATATTTATAAAGGAGGGAAAACCACGGCCTTGGCCTaGAGCACGCTTTCATTCTTG | + |
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Preference number: 5 (lower is better) Translates to: RERERERERERDIYKGGKTTALA*STLSFL Trigger: CAAGAATGAAAGCGTGCTCAAGGCCAAGGCCGTGGT...TTTCCCTCCTTTATAAATATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS CCA 72 bp | ATGCTGCAGTGGGTCCGCGCCGCCTCCACCGGGCACTaGTACGGGTACTGCGCTCGGGCCCGGAGGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: MLQWVRAASTGH*YGYCARARRVA Trigger: GGCCACCCTCCGGGCCCGAGCGCAGTACCCGTACCAGTGCCCGGTGGAGGCGGCGCGGACCCACTGCAGCAT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS CCA 72 bp | GAGTATGGAGTCCTGCAGGCTGTGGTGATGCTGCAGTaGGTCCGCGCCGCCTCCACCGGGCACTGGTACGGG | + |
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Preference number: 6 (lower is better) Translates to: EYGVLQAVVMLQ*VRAASTGHWYG Trigger: CCCGTACCAGTGCCCGGTGGAGGCGGCGCGGACCCACTGCAGCATCACCACAGCCTGCAGGACTCCATACTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS CAA 90 bp | GTCCCCGACGGCGTCTTCTCATCCTCGGAACTGCCTAGCACCGACTaGCCACTGCCATTGAGCGAGGAAGCCAGCGGGTTGTGGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VPDGVFSSSELPSTD*PLPLSEEASGLWLL Trigger: CAGCAGCCACAACCCGCTGGCTTCCTCGCTCAATGGCAGTGGCAAGTCGGTGCTAGGCAGTTCCGAGGATGAGAAGACGCCGTCGGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS CAA 90 bp | CCACTGCCATTGAGCGAGGAAGCCAGCGGGTTGTGGCTGCTGGAATaGGAGTTCTCGCTGTTCTCCCTTTCCTTGGCCTCGGCCGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: PLPLSEEASGLWLLE*EFSLFSLSLASAAL Trigger: CAGGGCGGCCGAGGCCAAGGAAAGGGAGAACAGCGAGAACTCCAATTCCAGCAGCCACAACCCGCTGGCTTCCTCGCTCAATGGCAGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS CCA 72 bp | GCTGAGCAACAGAGCGGGACTGGACGACGAGTGGTCTaGAGTCCCCGACGGCGTCTTCTCATCCTCGGAACT | + |
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Preference number: 6 (lower is better) Translates to: AEQQSGTGRRVV*SPRRRLLILGT Trigger: AGTTCCGAGGATGAGAAGACGCCGTCGGGGACTCCAGACCACTCGTCGTCCAGTCCCGCTCTGTTGCTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS TCA 72 bp | CCTCGGAACTGCCTAGCACCGACTTGCCACTGCCATTaGGCGAGGAAGCCAGCGGGTTGTGGCTGCTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: PRNCLAPTCHCH*ARKPAGCGCWN Trigger: ATTCCAGCAGCCACAACCCGCTGGCTTCCTCGCTCAATGGCAGTGGCAAGTCGGTGCTAGGCAGTTCCGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS CAA 72 bp | TCCTCGGAACTGCCTAGCACCGACTTGCCACTGCCATaGAGCGAGGAAGCCAGCGGGTTGTGGCTGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: SSELPSTDLPLP*SEEASGLWLLE Trigger: TTCCAGCAGCCACAACCCGCTGGCTTCCTCGCTCAATGGCAGTGGCAAGTCGGTGCTAGGCAGTTCCGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS CAA 72 bp | GGCGTCTTCTCATCCTCGGAACTGCCTAGCACCGACTaGCCACTGCCATTGAGCGAGGAAGCCAGCGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: GVFSSSELPSTD*PLPLSEEASGL Trigger: CAACCCGCTGGCTTCCTCGCTCAATGGCAGTGGCAAGTCGGTGCTAGGCAGTTCCGAGGATGAGAAGACGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS TCA 72 bp | AGGAGCCCAGGTCCACAAGGTTGGCCGACATGGGGTTaGGTATGGAGTCCTGCAGGCTGTGGTGATGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: RSPGPQGWPTWG*VWSPAGCGDAA Trigger: TGCAGCATCACCACAGCCTGCAGGACTCCATACTCAACCCCATGTCGGCCAACCTTGTGGACCTGGGCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS CAA 90 bp | CCTAGCACCGACTTGCCACTGCCATTGAGCGAGGAAGCCAGCGGGTaGTGGCTGCTGGAATTGGAGTTCTCGCTGTTCTCCCTTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: PSTDLPLPLSEEASG*WLLELEFSLFSLSL Trigger: CAAGGAAAGGGAGAACAGCGAGAACTCCAATTCCAGCAGCCACAACCCGCTGGCTTCCTCGCTCAATGGCAGTGGCAAGTCGGTGCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS CAA 90 bp | GTCTTCTCATCCTCGGAACTGCCTAGCACCGACTTGCCACTGCCATaGAGCGAGGAAGCCAGCGGGTTGTGGCTGCTGGAATTGGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: VFSSSELPSTDLPLP*SEEASGLWLLELEF Trigger: GAACTCCAATTCCAGCAGCCACAACCCGCTGGCTTCCTCGCTCAATGGCAGTGGCAAGTCGGTGCTAGGCAGTTCCGAGGATGAGAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS CAA 72 bp | TTGAGCGAGGAAGCCAGCGGGTTGTGGCTGCTGGAATaGGAGTTCTCGCTGTTCTCCCTTTCCTTGGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LSEEASGLWLLE*EFSLFSLSLAS Trigger: CGAGGCCAAGGAAAGGGAGAACAGCGAGAACTCCAATTCCAGCAGCCACAACCCGCTGGCTTCCTCGCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS CAA 72 bp | GACTTGCCACTGCCATTGAGCGAGGAAGCCAGCGGGTaGTGGCTGCTGGAATTGGAGTTCTCGCTGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: DLPLPLSEEASG*WLLELEFSLFS Trigger: GGAGAACAGCGAGAACTCCAATTCCAGCAGCCACAACCCGCTGGCTTCCTCGCTCAATGGCAGTGGCAAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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| CDS CCA 72 bp | TTGCCACTGCCATTGAGCGAGGAAGCCAGCGGGTTGTaGCTGCTGGAATTGGAGTTCTCGCTGTTCTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: LPLPLSEEASGL*LLELEFSLFSL Trigger: AAGGGAGAACAGCGAGAACTCCAATTCCAGCAGCCACAACCCGCTGGCTTCCTCGCTCAATGGCAGTGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024947.8 ENSMUST00000163568.4 |
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