RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIS (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027790

Ensembl transcript IDs: ENSMUST00000094190.5, ENSMUST00000167334.8

Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAAGGGCCCCACAGGAACTaGGTGTCCTCAATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKGPHRN*VSSIQL
Trigger: CAGCTGGATTGAGGACACCCAGTTCCTGTGGGGCCC...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAAATGGACCACTCCATCTaGTCCCAGGAGGCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKMDHSI*SQEAVL
Trigger: CAACACAGCCTCCTGGGAGCAGATGGAGTGGTCCAT...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAGGGCCCCACAGGAACTaGGTGTCCTCAATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISGPHRN*VSSIQL
Trigger: CAGCTGGATTGAGGACACCCAGTTCCTGTGGGGCCC...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAAACTCCAGCATTCCAGTaGTGGACCACTCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKTPAFQ*WTTPSA
Trigger: AGCAGATGGAGTGGTCCATCACTGGAATGCTGGAGT...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAAGCCAAGGTTCCAATATaGTGGCATTGCTGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKAKVPI*WHCWSS
Trigger: GGACGACCAGCAATGCCAGCATATTGGAACCTTGGC...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAACTGTGTACATCATACTaGTTCCCCCAGTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKLCTSY*FPQCCT
Trigger: TGTGCAGCACTGGGGGAATCAGTATGATGTACACAG...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAACAGAGCCCAGTAAGGTaGCATGACTGGAAAGCCAAT +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKQSPVR*HDWKAN
Trigger: ATTGGCTTTCCAGTCATGCCACCTTACTGGGCTCTG...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAACTTGCAGGATTCAACTaGAGTTCTGCTGTTATGCCC +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKLAGFN*SSAVMP
Trigger: GGGCATAACAGCAGAACTTCAGTTGAATCCTGCAAG...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACTGTAACAGGACTCCATaGGCATTGCCCTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYCNRTP*ALPSSS
Trigger: GGAGGATGAGGGCAATGCTCATGGAGTCCTGTTACA...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAACAAATTTCGCTTGAATaGTGTGTGTTCCGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKQISLE*CVFRFP
Trigger: GGGGAAGCGGAACACACAGCATTCAAGCGAAATTTG...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACGGACTCCATGAGCATTaGCCTCATCCTCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYGLHEH*PHPPKP
Trigger: TGGCTTTGGAGGATGAGGGCAATGCTCATGGAGTCC...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAAAGATTCCACCAATTGTaGGGTAGGTTAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKRFHQL*GRLEQV
Trigger: CACCTGCTCTAACCTACCGCACAATTGGTGGAATCT...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAAATATGCTGGCATTGCTaGTCGTCCAATGAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKICWHC*SSNELL
Trigger: CAAGAGCTCATTGGACGACCAGCAATGCCAGCATAT...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACGGAGCACATCCTTTCTaGGAACCGTGGATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYGAHPF*EPWIKL
Trigger: CAGCTTTATCCACGGTTCTCAGAAAGGATGTGCTCC...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGACTCCAGCATTCCAGTaGTGGACCACTCCATCTGCT +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQTPAFQ*WTTPSA
Trigger: AGCAGATGGAGTGGTCCATCACTGGAATGCTGGAGT...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTTGTAACAGGACTCCATaGGCATTGCCCTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: LILVTCKQVSRFSCCLESCNRTP*ALPSSS
Trigger: GGAGGATGAGGGCAATGCTCATGGAGTCCTGTTACA...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAAATACAGTGTGTCAGCTaGTGGGATTCCATTTCCATC +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKIQCVS*WDSISI
Trigger: GATGGAAATGGAATCCCAGCAGCTGACACACTGTAT...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCACCAATATGCTGGCATTaGTGGTCGTCCAATGAGCTC +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISPICWH*WSSNEL
Trigger: GAGCTCATTGGACGACCAGCAATGCCAGCATATTGG...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAACTTCTCCAAATAGAGTaGGAGAAGGGATTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKLLQIE*EKGFCS
Trigger: TGAGCAGAATCCCTTCTCCCACTCTATTTGGAGAAG...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAAAAGGTTCCAATATGCTaGCATTGCTGGTCGTCCAAT +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKKVPIC*HCWSSN
Trigger: ATTGGACGACCAGCAATGCCAGCATATTGGAACCTT...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACGACTTGTGCATCATATaGGATGCCAGCTTCCCGGTT +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYDLCII*DASFPV
Trigger: AACCGGGAAGCTGGCATCCCATATGATGCACAAGTC...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAGACTTGTGCATCATATaGGATGCCAGCTTCCCGGTT +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISDLCII*DASFPV
Trigger: AACCGGGAAGCTGGCATCCCATATGATGCACAAGTC...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAACTTTGTTGCACCTTCTaGGGTTGGTCCCAAAAACAT +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKLCCTF*GWSQKH
Trigger: ATGTTTTTGGGACCAACCCCAGAAGGTGCAACAAAG...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAAAGTTTATTCTCTCATTaGGAGGTTCACCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKSLFSH*EVHLAQ
Trigger: CTGAGCAAGGTGAACCTCTCAATGAGAGAATAAACT...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACTTGGTGTTGGCTGGATaGAAACCTCCATTGCATTGC +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYLVLAG*KPPLHC
Trigger: GCAATGCAATGGAGGTTTTCATCCAGCCAACACCAA...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTGGAGCACATCCTTTCTaGGAACCGTGGATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LILVTCKQVSRFSCCLESGAHPF*EPWIKL
Trigger: CAGCTTTATCCACGGTTCTCAGAAAGGATGTGCTCC...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGCGAACCAGCAAATGTTaGCCGGGTAAGGATGAAGCT +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQRTSKC*PGKDEA
Trigger: AGCTTCATCCTTACCCGGTCAACATTTGCTGGTTCG...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTCGAACCAGCAAATGTTaGCCGGGTAAGGATGAAGCT +
Preference number: 4 (lower is better)
Translates to: LILVTCKQVSRFSCCLESRTSKC*PGKDEA
Trigger: AGCTTCATCCTTACCCGGTCAACATTTGCTGGTTCG...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACCTTGCAGGATTCAACTaGAGTTCTGCTGTTATGCCC +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYLAGFN*SSAVMP
Trigger: GGGCATAACAGCAGAACTTCAGTTGAATCCTGCAAG...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGCCAATATGCTGGCATTaGTGGTCGTCCAATGAGCTC +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQPICWH*WSSNEL
Trigger: GAGCTCATTGGACGACCAGCAATGCCAGCATATTGG...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAGCTGCACAGCATCCATaGAAAGCGTTTTGGAGTACA +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISAAQHP*KAFWST
Trigger: TGTACTCCAAAACGCTTTGCATGGATGCTGTGCAGC...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGATGGACCACTCCATCTaGTCCCAGGAGGCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPMDHSI*SQEAVL
Trigger: CAACACAGCCTCCTGGGAGCAGATGGAGTGGTCCAT...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGAAGGCATACCGAACATaGCGAACTCCAGCATTCCAG +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQKAYRT*RTPAFQ
Trigger: CTGGAATGCTGGAGTTCGGCATGTTCGGTATGCCTT...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAAGATTCCACCAATTGTaGGGTAGGTTAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISRFHQL*GRLEQV
Trigger: CACCTGCTCTAACCTACCGCACAATTGGTGGAATCT...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAACAAATTCTCCCAGTTTaGATAGTTGTCTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKQILPV*IVVSQP
Trigger: TGGTTGGGAGACAACTATGCAAACTGGGAGAATTTG...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAATATGCTGGCATTGCTaGTCGTCCAATGAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISICWHC*SSNELL
Trigger: CAAGAGCTCATTGGACGACCAGCAATGCCAGCATAT...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGCAGAGCCCAGTAAGGTaGCATGACTGGAAAGCCAAT +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQQSPVR*HDWKAN
Trigger: ATTGGCTTTCCAGTCATGCCACCTTACTGGGCTCTG...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAACAACGAGCACAGAGGTaGTATTCTGAGTCATTAAAG +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKQRAQR*YSESLK
Trigger: CTTTAATGACTCAGAATACCACCTCTGTGCTCGTTG...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACCCATTCACAGCTGTCTaGAAAGGTCCAATGACAGGA +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYPFTAV*KGPMTG
Trigger: TCCTGTCATTGGACCTTTCCAGACAGCTGTGAATGG...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACTCCAGGACTAGGGGTTaGAGTTGGACTTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYSRTRG*SWTFYF
Trigger: GAAGTAAAAAGTCCAACTTCAACCCCTAGTCCTGGA...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTTTGGTGTTGGCTGGATaGAAACCTCCATTGCATTGC +
Preference number: 4 (lower is better)
Translates to: LILVTCKQVSRFSCCLESLVLAG*KPPLHC
Trigger: GCAATGCAATGGAGGTTTTCATCCAGCCAACACCAA...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCATTCCAGCGACTCAGTTaGAAGCCAAGGTTCCAATAT +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISFQRLS*KPRFQY
Trigger: ATATTGGAACCTTGGCTTTCAACTGAGTCGCTGGAA...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTCCCAGTAAGGTGGCATaGCTGGAAAGCCAATTACTT +
Preference number: 4 (lower is better)
Translates to: LILVTCKQVSRFSCCLESPSKVA*LESQLL
Trigger: AAGTAATTGGCTTTCCAGTCATGCCACCTTACTGGG...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGCCCAGTAAGGTGGCATaGCTGGAAAGCCAATTACTT +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQPSKVA*LESQLL
Trigger: AAGTAATTGGCTTTCCAGTCATGCCACCTTACTGGG...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGGCCAAGGTTCCAATATaGTGGCATTGCTGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPAKVPI*WHCWSS
Trigger: GGACGACCAGCAATGCCAGCATATTGGAACCTTGGC...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACAAGATTGCATTCATTTaGCCACCACTCCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYKIAFI*PPLPGS
Trigger: AGAACCTGGGAGTGGTGGGCAAATGAATGCAATCTT...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGGCTGCACAGCATCCATaGAAAGCGTTTTGGAGTACA +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQAAQHP*KAFWST
Trigger: TGTACTCCAAAACGCTTTGCATGGATGCTGTGCAGC...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACATGAAGAAATGGCCTTaGAACTGTCTCACCAAACGC +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYMKKWP*NCLTKR
Trigger: GCGTTTGGTGAGACAGTTGCAAGGCCATTTCTTCAT...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACTGGAAAAGCTACATGTaGTCTGGAAGCGTTAACAGC +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYWKSYM*SGSVNS
Trigger: GCTGTTAACGCTTCCAGAGCACATGTAGCTTTTCCA...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAATGTTGGATGCTGTTCTaGAATGCAGTTTATTCTCTC +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKCWMLF*NAVYSL
Trigger: GAGAGAATAAACTGCATTCCAGAACAGCATCCAACA...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCACTTCTCCAAATAGAGTaGGAGAAGGGATTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISLLQIE*EKGFCS
Trigger: TGAGCAGAATCCCTTCTCCCACTCTATTTGGAGAAG...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCACAGTGTGTCAGCTGCTaGGATTCCATTTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISQCVSC*DSISIF
Trigger: AAAGATGGAAATGGAATCCCAGCAGCTGACACACTG...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACAGAGCAGGTGTTGGCTaGAATGTAACATCCATTCCA +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYRAGVG*NVTSIP
Trigger: TGGAATGGATGTTACATTCCAGCCAACACCTGCTCT...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACCTTTGTTGCACCTTCTaGGGTTGGTCCCAAAAACAT +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYLCCTF*GWSQKH
Trigger: ATGTTTTTGGGACCAACCCCAGAAGGTGCAACAAAG...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTTCCAGGACTAGGGGTTaGAGTTGGACTTTTTACTTC +
Preference number: 4 (lower is better)
Translates to: LILVTCKQVSRFSCCLESSRTRG*SWTFYF
Trigger: GAAGTAAAAAGTCCAACTTCAACCCCTAGTCCTGGA...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACTATCTTCAATGCCCATaGAGAATGTCTGATGCCCAT +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYYLQCP*RMSDAH
Trigger: ATGGGCATCAGACATTCTTCATGGGCATTGAAGATA...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCATTGCTGGTCGTCCAATaGGCTCTTGATATTGTTGAA +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISLLVVQ*ALDIVE
Trigger: TTCAACAATATCAAGAGCTCATTGGACGACCAGCAA...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAGCGTTTTGGAGTACATaGTTTTGTCAAGAATACCGG +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISAFWST*FCQEYR
Trigger: CCGGTATTCTTGACAAAATCATGTACTCCAAAACGC...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGCTGTGTACATCATACTaGTTCCCCCAGTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPLCTSY*FPQCCT
Trigger: TGTGCAGCACTGGGGGAATCAGTATGATGTACACAG...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACGAATTTCTCATTGTCTaGGAAACTTTGCGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYEFLIV*ETLRRP
Trigger: TGGACGACGCAAAGTTTCTCAGACAATGAGAAATTC...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGTTATATCCAGGAGGTTaGTCTCTTGTGAACATCCCC +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQLYPGG*SLVNIP
Trigger: GGGGATGTTCACAAGAGATCAACCTCCTGGATATAA...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAAAAGCCAATTACTTCATaGTATTGCTTTGTTGCACCT +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKKPITS*YCFVAP
Trigger: AGGTGCAACAAAGCAATATCATGAAGTAATTGGCTT...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCATCTTGTCCACCACTCTaGTGTGGAATTCCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISSCPPL*CGIPKE
Trigger: TTCTTTAGGAATTCCACATCAGAGTGGTGGACAAGA...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACTCTTGTCCACCACTCTaGTGTGGAATTCCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYSCPPL*CGIPKE
Trigger: TTCTTTAGGAATTCCACATCAGAGTGGTGGACAAGA...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCATTTGAAGTTTTCCTCTaGCCTTTATGTCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISFEVFL*PLCLPL
Trigger: CAGGGGAAGACATAAAGGTCAGAGGAAAACTTCAAA...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGAAGGCATACCGAACATaGCGAACTCCAGCATTCCAG +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPKAYRT*RTPAFQ
Trigger: CTGGAATGCTGGAGTTCGGCATGTTCGGTATGCCTT...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTGTTGCATCCATCTTCTaGAGAGTTCTTCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LILVTCKQVSRFSCCLESVASIF*RVLLWC
Trigger: ACACCACAGAAGAACTCTGCAGAAGATGGATGCAAC...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGATGAAGAAATGGCCTTaGAACTGTCTCACCAAACGC +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQMKKWP*NCLTKR
Trigger: GCGTTTGGTGAGACAGTTGCAAGGCCATTTCTTCAT...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAACTTAATTCTAGCACTTaGAGGATTCAACTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKLNSST*RIQLKF
Trigger: GAACTTCAGTTGAATCCTGCAAGTGCTAGAATTAAG...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGATGATATTGCTTTGTTaGACCTTCTGGGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQMILLC*TFWGWS
Trigger: GGACCAACCCCAGAAGGTGCAACAAAGCAATATCAT...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTTGGAAAAGCTACATGTaGTCTGGAAGCGTTAACAGC +
Preference number: 4 (lower is better)
Translates to: LILVTCKQVSRFSCCLESWKSYM*SGSVNS
Trigger: GCTGTTAACGCTTCCAGAGCACATGTAGCTTTTCCA...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACCAAATTCTCCCAGTTTaGATAGTTGTCTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYQILPV*IVVSQP
Trigger: TGGTTGGGAGACAACTATGCAAACTGGGAGAATTTG...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAAAGTAATTATTGGTGTTaGCTGGATGAAAACCTCCAT +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKSNYWC*LDENLH
Trigger: ATGGAGGTTTTCATCCAGCCAACACCAATAATTACT...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTCTTCTCCTTCGAACCTaGATGCCAAAAGGATTTTCC +
Preference number: 4 (lower is better)
Translates to: LILVTCKQVSRFSCCLESLLLRT*MPKGFS
Trigger: GGAAAATCCTTTTGGCATCCAGGTTCGAAGGAGAAG...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGAGAGCAGGTGTTGGCTaGAATGTAACATCCATTCCA +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQRAGVG*NVTSIP
Trigger: TGGAATGGATGTTACATTCCAGCCAACACCTGCTCT...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACTGCACCTTCTGGGGTTaGTCCCAAAAACATGTAAAA +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYCTFWG*SQKHVK
Trigger: TTTTACATGTTTTTGGGACCAACCCCAGAAGGTGCA...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGTGGTTATGTAAATCCTaGGCAAACTCAGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQWLCKS*ANSGSP
Trigger: AGGACTTCCTGAGTTTGCTCAGGATTTACATAACCA...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGGCGTTTTGGAGTACATaGTTTTGTCAAGAATACCGG +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQAFWST*FCQEYR
Trigger: CCGGTATTCTTGACAAAATCATGTACTCCAAAACGC...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACTTCGTCTTGAGTAAATaGAAGCTGTTGTTCATTCCC +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYFVLSK*KLLFIP
Trigger: GGGAATGAACAACAGCTTTCATTTACTCAAGACGAA...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACTCCTTAGCTTCGTCTTaGGTAAATGAAAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYSLASS*VNESCC
Trigger: ACAACAGCTTTCATTTACTCAAGACGAAGCTAAGGA...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCATTTGCCTTTGTTGGATaGTGTTCTGGAATGCAGTTT +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISFAFVG*CSGMQF
Trigger: AAACTGCATTCCAGAACAGCATCCAACAAAGGCAAA...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAATAGCCATGGTTATCTaGAAAGAAGCACCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISIAMVI*KEAPRN
Trigger: ATTCCTTGGTGCTTCTTTGCAGATAACCATGGCTAT...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACTTCACCCAAACATTTTaGTCATTCCCCCTCACATAT +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYFTQTF*SFPLTY
Trigger: ATATGTGAGGGGGAATGAGCAAAATGTTTGGGTGAA...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAAAGCATCAGGAATATATaGACTCACGTATTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SQESRTVDRISIPPQEFKSIRNI*THVFCF
Trigger: GAAACAAAATACGTGAGTGCATATATTCCTGATGCT...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGATTCAACTGAAGTTCTaGTGTTATGCCCGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQIQLKF*CYARCQ
Trigger: TTGGCAACGGGCATAACAGCAGAACTTCAGTTGAAT...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGCAAATTTCGCTTGAATaGTGTGTGTTCCGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPQISLE*CVFRFP
Trigger: GGGGAAGCGGAACACACAGCATTCAAGCGAAATTTG...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAACATTTTGCCTTTGTTaGATGCTGTTCTGGAATGCA +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISTFCLC*MLFWNA
Trigger: TGCATTCCAGAACAGCATCCAACAAAGGCAAAATGT...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACATTATTGGTGTTGGCTaGATGAAAACCTCCATTGCA +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYIIGVG*MKTSIA
Trigger: TGCAATGGAGGTTTTCATCCAGCCAACACCAATAAT...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCACTCAATCCAGCTGTTTaGGTCTTCATAAAACTCATG +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISLNPAV*VFIKLM
Trigger: CATGAGTTTTATGAAGACCCAAACAGCTGGATTGAG...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACAGCTGTGCCTACATCTaGATAACAAGTGAATTTCTC +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYSCAYI*ITSEFL
Trigger: GAGAAATTCACTTGTTATCCAGATGTAGGCACAGCT...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAAGCTGTGCCTACATCTaGATAACAAGTGAATTTCTC +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISSCAYI*ITSEFL
Trigger: GAGAAATTCACTTGTTATCCAGATGTAGGCACAGCT...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGCAACGAGCACAGAGGTaGTATTCTGAGTCATTAAAG +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQQRAQR*YSESLK
Trigger: CTTTAATGACTCAGAATACCACCTCTGTGCTCGTTG...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACAAGCCAATTACTTCATaGTATTGCTTTGTTGCACCT +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYKPITS*YCFVAP
Trigger: AGGTGCAACAAAGCAATATCATGAAGTAATTGGCTT...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCACCTCATTTCTTTTTGTaGGTTCTGGAAAATAAGGTG +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISPHFFL*VLENKV
Trigger: CACCTTATTTTCCAGAACTCACAAAAAGAAATGAGG...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTACAGAGGTGGTATTCTaGGTCATTAAAGAAACCACA +
Preference number: 4 (lower is better)
Translates to: LILVTCKQVSRFSCCLESTEVVF*VIKETT
Trigger: TGTGGTTTCTTTAATGACTCAGAATACCACCTCTGT...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGATAGCCATGGTTATCTaGAAAGAAGCACCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQIAMVI*KEAPRN
Trigger: ATTCCTTGGTGCTTCTTTGCAGATAACCATGGCTAT...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAGATGAAAACCTCCATTaGATTGCTGTTCATAAGGAA +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISDENLH*IAVHKE
Trigger: TTCCTTATGAACAGCAATGCAATGGAGGTTTTCATC...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGTTCACCCAAACATTTTaGTCATTCCCCCTCACATAT +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQFTQTF*SFPLTY
Trigger: ATATGTGAGGGGGAATGAGCAAAATGTTTGGGTGAA...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGAAGATTGCATTCATTTaGCCACCACTCCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPKIAFI*PPLPGS
Trigger: AGAACCTGGGAGTGGTGGGCAAATGAATGCAATCTT...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGGTTGCATCCATCTTCTaGAGAGTTCTTCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPVASIF*RVLLWC
Trigger: ACACCACAGAAGAACTCTGCAGAAGATGGATGCAAC...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACCTTAATTCTAGCACTTaGAGGATTCAACTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYLNSST*RIQLKF
Trigger: GAACTTCAGTTGAATCCTGCAAGTGCTAGAATTAAG...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGATGATATTGCTTTGTTaGACCTTCTGGGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPMILLC*TFWGWS
Trigger: GGACCAACCCCAGAAGGTGCAACAAAGCAATATCAT...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACTATGTTCTGTTTCCATaGACATGGTTCGGAAATGTA +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYYVLFP*TWFGNV
Trigger: TACATTTCCGAACCATGTGCATGGAAACAGAACATA...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGTCATCAAAGAACTCATaGATTAGGGGTCTGATGACA +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQSSKNS*IRGLMT
Trigger: TGTCATCAGACCCCTAATGCATGAGTTCTTTGATGA...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGTGTTGGATGCTGTTCTaGAATGCAGTTTATTCTCTC +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQCWMLF*NAVYSL
Trigger: GAGAGAATAAACTGCATTCCAGAACAGCATCCAACA...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGGTATCTCTTGTTATTTaGATCTGTGAGCTTGAACCG +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQVSLVI*ICELEP
Trigger: CGGTTCAAGCTCACAGATCCAAATAACAAGAGATAC...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGCAGTGTGTCAGCTGCTaGGATTCCATTTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPQCVSC*DSISIF
Trigger: AAAGATGGAAATGGAATCCCAGCAGCTGACACACTG...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAGAAATCTGCAAATATTaGTTTGAGTACACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISEICKY*FEYTRG
Trigger: TCCTCTGGTGTACTCAAACCAATATTTGCAGATTTC...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACGAAATCTGCAAATATTaGTTTGAGTACACCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYEICKY*FEYTRG
Trigger: TCCTCTGGTGTACTCAAACCAATATTTGCAGATTTC...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGCTTCTCCTTCGAACCTaGATGCCAAAAGGATTTTCC +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPLLLRT*MPKGFS
Trigger: GGAAAATCCTTTTGGCATCCAGGTTCGAAGGAGAAG...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGAGTTTATTCTCTCATTaGGAGGTTCACCTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPSLFSH*EVHLAQ
Trigger: CTGAGCAAGGTGAACCTCTCAATGAGAGAATAAACT...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTGCTGGTCGTCCAATaGGCTCTTGATATTGTTGAA +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPLLVVQ*ALDIVE
Trigger: TTCAACAATATCAAGAGCTCATTGGACGACCAGCAA...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTGGTTATGTAAATCCTaGGCAAACTCAGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPWLCKS*ANSGSP
Trigger: AGGACTTCCTGAGTTTGCTCAGGATTTACATAACCA...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGGAATTTCTCATTGTCTaGGAAACTTTGCGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPEFLIV*ETLRRP
Trigger: TGGACGACGCAAAGTTTCTCAGACAATGAGAAATTC...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGCATCTGGATAACAAGTaGATTTCTCATTGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQHLDNK*ISHCLR
Trigger: TCTCAGACAATGAGAAATTCACTTGTTATCCAGATG...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGAGCATGTCATTTTTGTaGTATTTTACTTCCACGCGA +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQSMSFL*YFTSTR
Trigger: TCGCGTGGAAGTAAAATATCACAAAAATGACATGCT...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTAGCATGTCATTTTTGTaGTATTTTACTTCCACGCGA +
Preference number: 4 (lower is better)
Translates to: LILVTCKQVSRFSCCLESSMSFL*YFTSTR
Trigger: TCGCGTGGAAGTAAAATATCACAAAAATGACATGCT...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTCAGTTGCTCAATCTCTaGAGTATTTCTGTATCCATA +
Preference number: 4 (lower is better)
Translates to: LILVTCKQVSRFSCCLESQLLNL*SISVSI
Trigger: TATGGATACAGAAATACTTCAGAGATTGAGCAACTG...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGCAGTTGCTCAATCTCTaGAGTATTTCTGTATCCATA +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQQLLNL*SISVSI
Trigger: TATGGATACAGAAATACTTCAGAGATTGAGCAACTG...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTCCTCATTTCTTTTTGTaGGTTCTGGAAAATAAGGTG +
Preference number: 4 (lower is better)
Translates to: LILVTCKQVSRFSCCLESPHFFL*VLENKV
Trigger: CACCTTATTTTCCAGAACTCACAAAAAGAAATGAGG...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTTGAAGTTTTCCTCTaGCCTTTATGTCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPFEVFL*PLCLPL
Trigger: CAGGGGAAGACATAAAGGTCAGAGGAAAACTTCAAA...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGGATGAAAACCTCCATTaGATTGCTGTTCATAAGGAA +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQDENLH*IAVHKE
Trigger: TTCCTTATGAACAGCAATGCAATGGAGGTTTTCATC...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTTATGTTCTGTTTCCATaGACATGGTTCGGAAATGTA +
Preference number: 4 (lower is better)
Translates to: LILVTCKQVSRFSCCLESYVLFP*TWFGNV
Trigger: TACATTTCCGAACCATGTGCATGGAAACAGAACATA...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCATTGAACAACTTGTTCTaGTGTGTCTCCAAGAAATAT +
Preference number: 4 (lower is better)
Translates to: SVLKKIGSQESRTVDRISLNNLF*CVSKKY
Trigger: ATATTTCTTGGAGACACACCAGAACAAGTTGTTCAA...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACTTGAACAACTTGTTCTaGTGTGTCTCCAAGAAATAT +
Preference number: 4 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYLNNLF*CVSKKY
Trigger: ATATTTCTTGGAGACACACCAGAACAAGTTGTTCAA...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGGGTAATTCAGTAGATTaGGAGCACATCCTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPGNSVD*EHILSE
Trigger: CTCAGAAAGGATGTGCTCCCAATCTACTGAATTACC...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGCACGTATTTTGTTTCTaGTCTCAAAACAGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQHVFCF*SQNRSD
Trigger: ATCACTCCTGTTTTGAGACCAGAAACAAAATACGTG...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTCCAGCTGATTTGTATTaGTTCATCAAGAGTAACAGT +
Preference number: 4 (lower is better)
Translates to: LILVTCKQVSRFSCCLESPADLY*FIKSNS
Trigger: ACTGTTACTCTTGATGAACCAATACAAATCAGCTGG...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGACAGAGGTGGTATTCTaGGTCATTAAAGAAACCACA +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPTEVVF*VIKETT
Trigger: TGTGGTTTCTTTAATGACTCAGAATACCACCTCTGT...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTCGTCTTGAGTAAATaGAAGCTGTTGTTCATTCCC +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPFVLSK*KLLFIP
Trigger: GGGAATGAACAACAGCTTTCATTTACTCAAGACGAA...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTTGCCTTTGTTGGATaGTGTTCTGGAATGCAGTTT +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPFAFVG*CSGMQF
Trigger: AAACTGCATTCCAGAACAGCATCCAACAAAGGCAAA...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTAGCATCAGGAATATATaGACTCACGTATTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LILVTCKQVSRFSCCLESSIRNI*THVFCF
Trigger: GAAACAAAATACGTGAGTGCATATATTCCTGATGCT...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR GCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTCATCAAAGAACTCATaGATTAGGGGTCTGATGACA +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPSSKNS*IRGLMT
Trigger: TGTCATCAGACCCCTAATGCATGAGTTCTTTGATGA...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGCTCAATCCAGCTGTTTaGGTCTTCATAAAACTCATG +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPLNPAV*VFIKLM
Trigger: CATGAGTTTTATGAAGACCCAAACAGCTGGATTGAG...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR TCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGCATCTGGATAACAAGTaGATTTCTCATTGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPHLDNK*ISHCLR
Trigger: TCTCAGACAATGAGAAATTCACTTGTTATCCAGATG...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGAGTAATTATTGGTGTTaGCTGGATGAAAACCTCCAT +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPSNYWC*LDENLH
Trigger: ATGGAGGTTTTCATCCAGCCAACACCAATAATTACT...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGCACGTATTTTGTTTCTaGTCTCAAAACAGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPHVFCF*SQNRSD
Trigger: ATCACTCCTGTTTTGAGACCAGAAACAAAATACGTG...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CCA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGCCAGCTGATTTGTATTaGTTCATCAAGAGTAACAGT +
Preference number: 4 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPPADLY*FIKSNS
Trigger: ACTGTTACTCTTGATGAACCAATACAAATCAGCTGG...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
3UTR CAA 72 bp GTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTaGGAAAGTATTATAATTATTCAAATCCCGTTAAGC +
Preference number: 4 (lower is better)
Translates to: VTCKQVSRFSCC*ESIIIIQIPLS
Trigger: GCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CCA 90 bp ACAAATAGGGATTGTGGTTCGAAGGAAAGTAGCAAGGAGGCACATTaGCGAGCCCGCTCACCGGTTCCCATATGCAGCCTCTCTCTACGC +
Preference number: 5 (lower is better)
Translates to: TNRDCGSKESSKEAH*RARSPVPICSLSLR
Trigger: GCGTAGAGAGAGGCTGCATATGGGAACCGGTGAGCGGGCTCGCCAATGTGCCTCCTTGCTACTTTCCTTCGAACCACAATCCCTATTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 90 bp GAGAGGTTCACCTTGCTCAGGCGGACACCTTCCAGGACTAGGGGTTaGAGTTGGACTTTTTACTTCTTCCACAGCAGGCACCTTTGTAGC +
Preference number: 5 (lower is better)
Translates to: ERFTLLRRTPSRTRG*SWTFYFFHSRHLCS
Trigger: GCTACAAAGGTGCCTGCTGTGGAAGAAGTAAAAAGTCCAACTTCAACCCCTAGTCCTGGAAGGTGTCCGCCTGAGCAAGGTGAACCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS GCA 90 bp TGCTGTTCTGGAATGCAGTTTATTCTCTCATTGAGAGGTTCACCTTaGTCAGGCGGACACCTTCCAGGACTAGGGGTTGAAGTTGGACTT +
Preference number: 5 (lower is better)
Translates to: CCSGMQFILSLRGSP*SGGHLPGLGVEVGL
Trigger: AAGTCCAACTTCAACCCCTAGTCCTGGAAGGTGTCCGCCTGAGCAAGGTGAACCTCTCAATGAGAGAATAAACTGCATTCCAGAACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 90 bp GATTCTGCTCAGTGTGGCTTTAAGTCCACTGTTGTCATTCGTGACTaGCGCAGCAGTATAGCCATGGTTATCTGCAAAGAAGCACCAAGG +
Preference number: 5 (lower is better)
Translates to: DSAQCGFKSTVVIRD*RSSIAMVICKEAPR
Trigger: CCTTGGTGCTTCTTTGCAGATAACCATGGCTATACTGCTGCGTCAGTCACGAATGACAACAGTGGACTTAAAGCCACACTGAGCAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS GCA 90 bp GGACGCCAGCAACAGCCACGCTCTTCACATTTTGCCTTTGTTGGATaGTGTTCTGGAATGCAGTTTATTCTCTCATTGAGAGGTTCACCT +
Preference number: 5 (lower is better)
Translates to: GRQQQPRSSHFAFVG*CSGMQFILSLRGSP
Trigger: AGGTGAACCTCTCAATGAGAGAATAAACTGCATTCCAGAACAGCATCCAACAAAGGCAAAATGTGAAGAGCGTGGCTGTTGCTGGCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CCA 90 bp CCATGGACGCCAGCAACAGCCACGCTCTTCACATTTTGCCTTTGTTaGATGCTGTTCTGGAATGCAGTTTATTCTCTCATTGAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: PWTPATATLFTFCLC*MLFWNAVYSLIERF
Trigger: GAACCTCTCAATGAGAGAATAAACTGCATTCCAGAACAGCATCCAACAAAGGCAAAATGTGAAGAGCGTGGCTGTTGCTGGCGTCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS GCA 90 bp AGTGTTGTTCCATGGACGCCAGCAACAGCCACGCTCTTCACATTTTaGCTTTGTTGGATGCTGTTCTGGAATGCAGTTTATTCTCTCATT +
Preference number: 5 (lower is better)
Translates to: SVVPWTPATATLFTF*LCWMLFWNAVYSLI
Trigger: AATGAGAGAATAAACTGCATTCCAGAACAGCATCCAACAAAGGCAAAATGTGAAGAGCGTGGCTGTTGCTGGCGTCCATGGAACAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS GCA 90 bp AGACACGTAATTCCAGCGACTCAGTTGAAAGCCAAGGTTCCAATATaGTGGCATTGCTGGTCGTCCAATGAGCTCTTGATATTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: RHVIPATQLKAKVPI*WHCWSSNELLILLN
Trigger: GTTCAACAATATCAAGAGCTCATTGGACGACCAGCAATGCCAGCATATTGGAACCTTGGCTTTCAACTGAGTCGCTGGAATTACGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CCA 90 bp ATGGTTATCTGCAAAGAAGCACCAAGGAATAATAGTGTTGTTCCATaGACGCCAGCAACAGCCACGCTCTTCACATTTTGCCTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: MVICKEAPRNNSVVP*TPATATLFTFCLCW
Trigger: CCAACAAAGGCAAAATGTGAAGAGCGTGGCTGTTGCTGGCGTCCATGGAACAACACTATTATTCCTTGGTGCTTCTTTGCAGATAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CCA 90 bp CACGTAATTCCAGCGACTCAGTTGAAAGCCAAGGTTCCAATATGCTaGCATTGCTGGTCGTCCAATGAGCTCTTGATATTGTTGAACAAC +
Preference number: 5 (lower is better)
Translates to: HVIPATQLKAKVPIC*HCWSSNELLILLNN
Trigger: GTTGTTCAACAATATCAAGAGCTCATTGGACGACCAGCAATGCCAGCATATTGGAACCTTGGCTTTCAACTGAGTCGCTGGAATTACGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS GCA 90 bp ATTCCAGCGACTCAGTTGAAAGCCAAGGTTCCAATATGCTGGCATTaGTGGTCGTCCAATGAGCTCTTGATATTGTTGAACAACTTGTTC +
Preference number: 5 (lower is better)
Translates to: IPATQLKAKVPICWH*WSSNELLILLNNLF
Trigger: GAACAAGTTGTTCAACAATATCAAGAGCTCATTGGACGACCAGCAATGCCAGCATATTGGAACCTTGGCTTTCAACTGAGTCGCTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS GCA 90 bp GGTCCAATGACAGGAGTCACCATAAAAGCTGGACCCCACAGGAACTaGTTGTATATTTCCCAGGTTTCTTTATCATCAAAGAACTCATGC +
Preference number: 5 (lower is better)
Translates to: GPMTGVTIKAGPHRN*LYISQVSLSSKNSC
Trigger: GCATGAGTTCTTTGATGATAAAGAAACCTGGGAAATATACAAGCAGTTCCTGTGGGGTCCAGCTTTTATGGTGACTCCTGTCATTGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAAGGGTTTTCTGAGACCTaGACATCATACAGTGTGTCA +
Preference number: 5 (lower is better)
Translates to: SQESRTVDRISIPPQEFKGFSET*TSYSVS
Trigger: TGACACACTGTATGATGTCAAGGTCTCAGAAAACCC...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAAATTCCAGCGACTCAGTaGAAAGCCAAGGTTCCAATA +
Preference number: 5 (lower is better)
Translates to: SQESRTVDRISIPPQEFKIPATQ*KAKVPI
Trigger: TATTGGAACCTTGGCTTTCAACTGAGTCGCTGGAAT...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACTTCGGCTTGCTGTTGTaGTTACATCAGGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYFGLLL*LHQVAG
Trigger: CCCAGCAACCTGATGTAACAACAACAGCAAGCCGAA...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAATTGCACCTTCTGGGGTaGGTCCCAAAAACATGTAAA +
Preference number: 5 (lower is better)
Translates to: SQESRTVDRISIPPQEFKLHLLG*VPKTCK
Trigger: TTTACATGTTTTTGGGACCAACCCCAGAAGGTGCAA...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 90 bp GAAACTTCATTCATGTCAATCCAGAGTCCATCATATTCCACTTGCTaGTGGAAAAGATTGCATTCATTTGCCCACCACTCCCAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: ETSFMSIQSPSYSTC*WKRLHSFAHHSQVL
Trigger: CAGAACCTGGGAGTGGTGGGCAAATGAATGCAATCTTTTCCATCAGCAAGTGGAATATGATGGACTCTGGATTGACATGAATGAAGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CCA 90 bp TGTGTCAGCTGCTGGGATTCCATTTCCATCTTTTACAAACTGATGTaGCACTTCGTATCTCTTGTTATTTGGATCTGTGAGCTTGAACCG +
Preference number: 5 (lower is better)
Translates to: CVSCWDSISIFYKLM*HFVSLVIWICELEP
Trigger: CGGTTCAAGCTCACAGATCCAAATAACAAGAGATACGAAGTGCCACATCAGTTTGTAAAAGATGGAAATGGAATCCCAGCAGCTGACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAACTTCACATTTTGCCTTaGTTGGATGCTGTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: SQESRTVDRISIPPQEFKLHILP*LDAVLE
Trigger: TTCCAGAACAGCATCCAACAAAGGCAAAATGTGAAG...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAATGGTTAGGTAGTGCCTaGATGTGTTTACCAAAAGAG +
Preference number: 5 (lower is better)
Translates to: SQESRTVDRISIPPQEFKWLGSA*MCLPKE
Trigger: CTCTTTTGGTAAACACATCAAGGCACTACCTAACCA...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCACATGAAGAAATGGCCTaGCAACTGTCTCACCAAACG +
Preference number: 5 (lower is better)
Translates to: SVLKKIGSQESRTVDRISHEEMA*QLSHQT
Trigger: CGTTTGGTGAGACAGTTGCAAGGCCATTTCTTCATG...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGTTCGGCTTGCTGTTGTaGTTACATCAGGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQFGLLL*LHQVAG
Trigger: CCCAGCAACCTGATGTAACAACAACAGCAAGCCGAA...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAATTTATATCCAGGAGGTaGATCTCTTGTGAACATCCC +
Preference number: 5 (lower is better)
Translates to: SQESRTVDRISIPPQEFKFISRR*ISCEHP
Trigger: GGGATGTTCACAAGAGATCAACCTCCTGGATATAAA...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACCATGATATTGCTTTGTaGCACCTTCTGGGGTTGGTC +
Preference number: 5 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYHDIAL*HLLGLV
Trigger: GACCAACCCCAGAAGGTGCAACAAAGCAATATCATG...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCACATGATATTGCTTTGTaGCACCTTCTGGGGTTGGTC +
Preference number: 5 (lower is better)
Translates to: SVLKKIGSQESRTVDRISHDIAL*HLLGLV
Trigger: GACCAACCCCAGAAGGTGCAACAAAGCAATATCATG...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 90 bp TACAGTGTGTCAGCTGCTGGGATTCCATTTCCATCTTTTACAAACTaGTGTGGCACTTCGTATCTCTTGTTATTTGGATCTGTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: YSVSAAGIPFPSFTN*CGTSYLLLFGSVSL
Trigger: CAAGCTCACAGATCCAAATAACAAGAGATACGAAGTGCCACATCAGTTTGTAAAAGATGGAAATGGAATCCCAGCAGCTGACACACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 90 bp GACTCTTTCACCCAAACATTTTGCTCATTCCCCCTCACATATGTTTaGTATTCGGCACCATTTGCACGTTTGTTTATAGAGATTGCAGGG +
Preference number: 5 (lower is better)
Translates to: DSFTQTFCSFPLTYV*YSAPFARLFIEIAG
Trigger: CCCTGCAATCTCTATAAACAAACGTGCAAATGGTGCCGAATATCAAACATATGTGAGGGGGAATGAGCAAAATGTTTGGGTGAAAGAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCACACATTTTGCCTTTGTaGGATGCTGTTCTGGAATGC +
Preference number: 5 (lower is better)
Translates to: SVLKKIGSQESRTVDRISHILPL*DAVLEC
Trigger: GCATTCCAGAACAGCATCCAACAAAGGCAAAATGTG...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACCACGCTCTTCACATTTaGCCTTTGTTGGATGCTGTT +
Preference number: 5 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYHALHI*PLLDAV
Trigger: AACAGCATCCAACAAAGGCAAAATGTGAAGAGCGTG...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACCAAGGAATAATAGTGTaGTTCCATGGACGCCAGCAA +
Preference number: 5 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYQGIIV*FHGRQQ
Trigger: TTGCTGGCGTCCATGGAACAACACTATTATTCCTTG...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAGGCACTTCGTATCTCTaGTTATTTGGATCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: SVLKKIGSQESRTVDRISGTSYL*LFGSVS
Trigger: GCTCACAGATCCAAATAACAAGAGATACGAAGTGCC...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCAGCGACTCAGTaGAAAGCCAAGGTTCCAATA +
Preference number: 5 (lower is better)
Translates to: SVLKKIGSQESRTVDRISIPATQ*KAKVPI
Trigger: TATTGGAACCTTGGCTTTCAACTGAGTCGCTGGAAT...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAATTGGAGTACATGATTTaGTCAAGAATACCGGGAGTA +
Preference number: 5 (lower is better)
Translates to: SQESRTVDRISIPPQEFKLEYMI*SRIPGV
Trigger: TACTCCCGGTATTCTTGACAAAATCATGTACTCCAA...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCACTTCATGATATTGCTTaGTTGCACCTTCTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: SVLKKIGSQESRTVDRISLHDIA*LHLLGL
Trigger: CAACCCCAGAAGGTGCAACAAAGCAATATCATGAAG...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACCTTCATGATATTGCTTaGTTGCACCTTCTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYLHDIA*LHLLGL
Trigger: CAACCCCAGAAGGTGCAACAAAGCAATATCATGAAG...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTCCAAATTCTCCCAGTTaGCATAGTTGTCTCCCAACC +
Preference number: 5 (lower is better)
Translates to: LILVTCKQVSRFSCCLESPNSPS*HSCLPT
Trigger: GGTTGGGAGACAACTATGCAAACTGGGAGAATTTGG...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAACCAGGAAACAGGATCTaGCCTTCTAGTAAATTGAAT +
Preference number: 5 (lower is better)
Translates to: SQESRTVDRISIPPQEFKPGNRI*PSSKLN
Trigger: ATTCAATTTACTAGAAGGCAAGATCCTGTTTCCTGG...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 90 bp AGTAGCTGTGCCTACATCTGGATAACAAGTGAATTTCTCATTGTCTaGGAAACTTTGCGTCGTCCATCTAACTATAAAGGTTTTGCCGAG +
Preference number: 5 (lower is better)
Translates to: SSCAYIWITSEFLIV*ETLRRPSNYKGFAE
Trigger: CTCGGCAAAACCTTTATAGTTAGATGGACGACGCAAAGTTTCTCAGACAATGAGAAATTCACTTGTTATCCAGATGTAGGCACAGCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CCA 90 bp TTTGTGATATTTTACTTCCACGCGAAGAGTGGAGATGGGATTAGATaGAAGCTTAATTCTAGCACTTGCAGGATTCAACTGAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: FVIFYFHAKSGDGIR*KLNSSTCRIQLKFC
Trigger: GCAGAACTTCAGTTGAATCCTGCAAGTGCTAGAATTAAGCTTCCATCTAATCCCATCTCCACTCTTCGCGTGGAAGTAAAATATCACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACCAGTTTATTCTCTCATaGAGAGGTTCACCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYQFILS*RGSPCS
Trigger: TGAGCAAGGTGAACCTCTCAATGAGAGAATAAACTG...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCACAGTTTATTCTCTCATaGAGAGGTTCACCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: SVLKKIGSQESRTVDRISQFILS*RGSPCS
Trigger: TGAGCAAGGTGAACCTCTCAATGAGAGAATAAACTG...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTGGCACTTCGTATCTCTaGTTATTTGGATCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: LILVTCKQVSRFSCCLESGTSYL*LFGSVS
Trigger: GCTCACAGATCCAAATAACAAGAGATACGAAGTGCC...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACCTTTTCCTGATGACTTaGATGCTGAACGGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYLFLMT*MLNGFS
Trigger: AGAAAACCCGTTCAGCATCAAAGTCATCAGGAAAAG...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp AGTCAGGAAAGTAGAACCGTGGACCGGATATCAATTCCTCCTCAGGAATTCAAATCAAACAAGACTTTGTaGTTGCTTTTCCTGATGACT +
Preference number: 5 (lower is better)
Translates to: SQESRTVDRISIPPQEFKSNKTL*LLFLMT
Trigger: AGTCATCAGGAAAAGCAACAACAAAGTCTTGTTTGA...TTTGAATTCCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACTTTCACCCAAACATTTaGCTCATTCCCCCTCACATA +
Preference number: 5 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYFHPNI*LIPPHI
Trigger: TATGTGAGGGGGAATGAGCAAAATGTTTGGGTGAAA...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCATGGTTAGGTAGTGCCTaGATGTGTTTACCAAAAGAG +
Preference number: 5 (lower is better)
Translates to: SVLKKIGSQESRTVDRISWLGSA*MCLPKE
Trigger: CTCTTTTGGTAAACACATCAAGGCACTACCTAACCA...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTTCTTTCGGCTTGCTGTaGTTGTTACATCAGGTTGCT +
Preference number: 5 (lower is better)
Translates to: LILVTCKQVSRFSCCLESSFGLL*LLHQVA
Trigger: AGCAACCTGATGTAACAACAACAGCAAGCCGAAAGA...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGTCTTTCGGCTTGCTGTaGTTGTTACATCAGGTTGCT +
Preference number: 5 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQSFGLL*LLHQVA
Trigger: AGCAACCTGATGTAACAACAACAGCAAGCCGAAAGA...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACCTCAGCCCAAGGACTTaGATTGTTTTAAACACAAGG +
Preference number: 5 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYLSPRT*IVLNTR
Trigger: CCTTGTGTTTAAAACAATCAAAGTCCTTGGGCTGAG...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAAAGATGAGGGTTCATTaGCTGATCATTTTCACCCAC +
Preference number: 5 (lower is better)
Translates to: SVLKKIGSQESRTVDRISKMRVH*LIIFTH
Trigger: GTGGGTGAAAATGATCAGCAAATGAACCCTCATCTT...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGCTGCTGTTATGCCCGTaGCCAATTTTTGAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQLLLCP*PIFELK
Trigger: CTTCAACTCAAAAATTGGCAACGGGCATAACAGCAG...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACGCAGCTTTCATGTCATaGTACAGTTGCTCAATCTCT +
Preference number: 5 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYAAFMS*YSCSIS
Trigger: AGAGATTGAGCAACTGTACAATGACATGAAAGCTGC...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAAGTCATAAATTTCTCTaGTCCACCACTCTGATGTGG +
Preference number: 5 (lower is better)
Translates to: SVLKKIGSQESRTVDRISSHKFL*STTLMW
Trigger: CCACATCAGAGTGGTGGACAAGAGAAATTTATGACT...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACAGTCATAAATTTCTCTaGTCCACCACTCTGATGTGG +
Preference number: 5 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYSHKFL*STTLMW
Trigger: CCACATCAGAGTGGTGGACAAGAGAAATTTATGACT...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CCA 90 bp GACTGGAAAGCCAATTACTTCATGATATTGCTTTGTTGCACCTTCTaGGGTTGGTCCCAAAAACATGTAAAAATCCAAGATTCCACCAAT +
Preference number: 5 (lower is better)
Translates to: DWKANYFMILLCCTF*GWSQKHVKIQDSTN
Trigger: ATTGGTGGAATCTTGGATTTTTACATGTTTTTGGGACCAACCCCAGAAGGTGCAACAAAGCAATATCATGAAGTAATTGGCTTTCCAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTTCTGCAAATATTGGTTaGAGTACACCAGAGGACCAA +
Preference number: 5 (lower is better)
Translates to: LILVTCKQVSRFSCCLESSANIG*STPEDQ
Trigger: TTGGTCCTCTGGTGTACTCAAACCAATATTTGCAGA...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGTCTGCAAATATTGGTTaGAGTACACCAGAGGACCAA +
Preference number: 5 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQSANIG*STPEDQ
Trigger: TTGGTCCTCTGGTGTACTCAAACCAATATTTGCAGA...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAATATTGTTGAACAACTaGTTCTGGTGTGTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: SVLKKIGSQESRTVDRISILLNN*FWCVSK
Trigger: CTTGGAGACACACCAGAACAAGTTGTTCAACAATAT...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACATATTGTTGAACAACTaGTTCTGGTGTGTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYILLNN*FWCVSK
Trigger: CTTGGAGACACACCAGAACAAGTTGTTCAACAATAT...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAGAGCTCTTGATATTGTaGAACAACTTGTTCTGGTGT +
Preference number: 5 (lower is better)
Translates to: SVLKKIGSQESRTVDRISELLIL*NNLFWC
Trigger: ACACCAGAACAAGTTGTTCAACAATATCAAGAGCTC...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCATCGTCCAATGAGCTCTaGATATTGTTGAACAACTTG +
Preference number: 5 (lower is better)
Translates to: SVLKKIGSQESRTVDRISSSNEL*ILLNNL
Trigger: CAAGTTGTTCAACAATATCAAGAGCTCATTGGACGA...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTTTTCACCCAAACATTTaGCTCATTCCCCCTCACATA +
Preference number: 5 (lower is better)
Translates to: LILVTCKQVSRFSCCLESFHPNI*LIPPHI
Trigger: TATGTGAGGGGGAATGAGCAAAATGTTTGGGTGAAA...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp GGTGACATCCAGGTTGCATTCATAGAACTAGTTAGCAGTTCTTTTGATGCATACTCCATGCAAAGCGTTTaGGAGTACATGATTTTGTCA +
Preference number: 5 (lower is better)
Translates to: GDIQVAFIELVSSSFDAYSMQSV*EYMILS
Trigger: TGACAAAATCATGTACTCCAAAACGCTTTGCATGGA...GTATGCATCAAAAGAACTGCTAACTAGTTCTATGAATGCAACCTGGATGTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTCCTCAATCCAGCTGTTaGGGTCTTCATAAAACTCAT +
Preference number: 5 (lower is better)
Translates to: LILVTCKQVSRFSCCLESPQSSC*GLHKTH
Trigger: ATGAGTTTTATGAAGACCCAAACAGCTGGATTGAGG...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAATGCACTCACGTATTTaGTTTCTGGTCTCAAAACAG +
Preference number: 5 (lower is better)
Translates to: SVLKKIGSQESRTVDRISMHSRI*FLVSKQ
Trigger: CTGTTTTGAGACCAGAAACAAAATACGTGAGTGCAT...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTAAGATGAGGGTTCATTaGCTGATCATTTTCACCCAC +
Preference number: 5 (lower is better)
Translates to: LILVTCKQVSRFSCCLESKMRVH*LIIFTH
Trigger: GTGGGTGAAAATGATCAGCAAATGAACCCTCATCTT...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTGCAGCTTTCATGTCATaGTACAGTTGCTCAATCTCT +
Preference number: 5 (lower is better)
Translates to: LILVTCKQVSRFSCCLESAAFMS*YSCSIS
Trigger: AGAGATTGAGCAACTGTACAATGACATGAAAGCTGC...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGCCAAATTCTCCCAGTTaGCATAGTTGTCTCCCAACC +
Preference number: 5 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPPNSPS*HSCLPT
Trigger: GGTTGGGAGACAACTATGCAAACTGGGAGAATTTGG...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAAACAAGACTTTGTTGTaGCTTTTCCTGATGACTTTG +
Preference number: 5 (lower is better)
Translates to: SVLKKIGSQESRTVDRISNKTLL*LFLMTL
Trigger: CAAAGTCATCAGGAAAAGCAACAACAAAGTCTTGTT...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGTCGTCCAATGAGCTCTaGATATTGTTGAACAACTTG +
Preference number: 5 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQSSNEL*ILLNNL
Trigger: CAAGTTGTTCAACAATATCAAGAGCTCATTGGACGA...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGTCCATGCAAAGCGTTTaGGAGTACATGATTTTGTCA +
Preference number: 5 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQSMQSV*EYMILS
Trigger: TGACAAAATCATGTACTCCAAAACGCTTTGCATGGA...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTGTACATGTCAACCCTTaGTTTTCTCCATGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: LILVTCKQVSRFSCCLESVHVNP*FSPWSF
Trigger: AAAAGACCATGGAGAAAACAAAGGGTTGACATGTAC...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGGTACATGTCAACCCTTaGTTTTCTCCATGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQVHVNP*FSPWSF
Trigger: AAAAGACCATGGAGAAAACAAAGGGTTGACATGTAC...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGCTGCTGTTATGCCCGTaGCCAATTTTTGAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPLLLCP*PIFELK
Trigger: CTTCAACTCAAAAATTGGCAACGGGCATAACAGCAG...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTGCACCTTCTGGGGTaGGTCCCAAAAACATGTAAA +
Preference number: 5 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPLHLLG*VPKTCK
Trigger: TTTACATGTTTTTGGGACCAACCCCAGAAGGTGCAA...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp TCTGTTTTAAAGAAAATAGGGAGTCAGGAAAGTAGAACCGTGGACCGGATATCAAATTACTTCATGATATaGCTTTGTTGCACCTTCTGG +
Preference number: 5 (lower is better)
Translates to: SVLKKIGSQESRTVDRISNYFMI*LCCTFW
Trigger: CCAGAAGGTGCAACAAAGCAATATCATGAAGTAATT...TGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCTATTTTCTTTAAAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGCTTTTCCTGATGACTTaGATGCTGAACGGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPLFLMT*MLNGFS
Trigger: AGAAAACCCGTTCAGCATCAAAGTCATCAGGAAAAG...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTGTATCAAACAAGACTTaGTTGTTGCTTTTCCTGATG +
Preference number: 5 (lower is better)
Translates to: LILVTCKQVSRFSCCLESVSNKT*LLLFLM
Trigger: CATCAGGAAAAGCAACAACAAAGTCTTGTTTGATAC...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGCACTTGGAAGTCTTGTaGAAATCTGCAAATATTGGT +
Preference number: 5 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQHLEVL*KSANIG
Trigger: ACCAATATTTGCAGATTTCAACAAGACTTCCAAGTG...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTTATCCTAGTTACATGCAAACAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTAAAACCTCCATTGCATaGCTGTTCATAAGGAAAACA +
Preference number: 5 (lower is better)
Translates to: LILVTCKQVSRFSCCLESKTSIA*LFIRKT
Trigger: TGTTTTCCTTATGAACAGCAATGCAATGGAGGTTTT...ACTTTCCAAGCAACAGCTAAACCTGGAAACTTGTTTGCATGTAACTAGGATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGCCTCAATCCAGCTGTTaGGGTCTTCATAAAACTCAT +
Preference number: 5 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPPQSSC*GLHKTH
Trigger: ATGAGTTTTATGAAGACCCAAACAGCTGGATTGAGG...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTAAGCCTGCTGAGCAGAATTACTTCATGATATaGCTTTGTTGCACCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LLLGKYYNYSNPVKPAEQNYFMI*LCCTFW
Trigger: CCAGAAGGTGCAACAAAGCAATATCATGAAGTAATT...CTGCTCAGCAGGCTTAACGGGATTTGAATAATTATAATACTTTCCAAGCAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGTTGGAGTACATGATTTaGTCAAGAATACCGGGAGTA +
Preference number: 5 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPLEYMI*SRIPGV
Trigger: TACTCCCGGTATTCTTGACAAAATCATGTACTCCAA...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGATGCACTCACGTATTTaGTTTCTGGTCTCAAAACAG +
Preference number: 5 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPMHSRI*FLVSKQ
Trigger: CTGTTTTGAGACCAGAAACAAAATACGTGAGTGCAT...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGCCAGGAAACAGGATCTaGCCTTCTAGTAAATTGAAT +
Preference number: 5 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPPGNRI*PSSKLN
Trigger: ATTCAATTTACTAGAAGGCAAGATCCTGTTTCCTGG...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGAACAAGACTTTGTTGTaGCTTTTCCTGATGACTTTG +
Preference number: 5 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPNKTLL*LFLMTL
Trigger: CAAAGTCATCAGGAAAAGCAACAACAAAGTCTTGTT...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS-3UTR CAA 90 bp CAAGTTTCCAGGTTTAGCTGTTGCTTGGAAAGTATTATAATTATTCAAATCCCGCACTTGGAAGTCTTGTaGAAATCTGCAAATATTGGT +
Preference number: 5 (lower is better)
Translates to: QVSRFSCCLESIIIIQIPHLEVL*KSANIG
Trigger: ACCAATATTTGCAGATTTCAACAAGACTTCCAAGTG...CGGGATTTGAATAATTATAATACTTTCCAAGCAACAGCTAAACCTGGAAACTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 72 bp AAGGCATACCGAACATGCCGAACTCCAGCATTCCAGTaGTGGACCACTCCATCTGCTCCCAGGAGGCTGTGT +
Preference number: 6 (lower is better)
Translates to: KAYRTCRTPAFQ*WTTPSAPRRLC
Trigger: ACACAGCCTCCTGGGAGCAGATGGAGTGGTCCATCACTGGAATGCTGGAGTTCGGCATGTTCGGTATGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 72 bp ACCTTGCTCAGGCGGACACCTTCCAGGACTAGGGGTTaGAGTTGGACTTTTTACTTCTTCCACAGCAGGCAC +
Preference number: 6 (lower is better)
Translates to: TLLRRTPSRTRG*SWTFYFFHSRH
Trigger: GTGCCTGCTGTGGAAGAAGTAAAAAGTCCAACTTCAACCCCTAGTCCTGGAAGGTGTCCGCCTGAGCAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 90 bp GCAGTGCAGGGCCCCACAGGAACTGGGTGTCCTCAATCCAGCTGTTaGGGTCTTCATAAAACTCATGAAGAAATGGCCTTGCAACTGTCT +
Preference number: 6 (lower is better)
Translates to: AVQGPTGTGCPQSSC*GLHKTHEEMALQLS
Trigger: AGACAGTTGCAAGGCCATTTCTTCATGAGTTTTATGAAGACCCAAACAGCTGGATTGAGGACACCCAGTTCCTGTGGGGCCCTGCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS GCA 72 bp GGAATGCAGTTTATTCTCTCATTGAGAGGTTCACCTTaGTCAGGCGGACACCTTCCAGGACTAGGGGTTGAA +
Preference number: 6 (lower is better)
Translates to: GMQFILSLRGSP*SGGHLPGLGVE
Trigger: TTCAACCCCTAGTCCTGGAAGGTGTCCGCCTGAGCAAGGTGAACCTCTCAATGAGAGAATAAACTGCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 72 bp GGCCCCACAGGAACTGGGTGTCCTCAATCCAGCTGTTaGGGTCTTCATAAAACTCATGAAGAAATGGCCTTG +
Preference number: 6 (lower is better)
Translates to: GPTGTGCPQSSC*GLHKTHEEMAL
Trigger: CAAGGCCATTTCTTCATGAGTTTTATGAAGACCCAAACAGCTGGATTGAGGACACCCAGTTCCTGTGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 90 bp TTTGCCTTTGTTGGATGCTGTTCTGGAATGCAGTTTATTCTCTCATaGAGAGGTTCACCTTGCTCAGGCGGACACCTTCCAGGACTAGGG +
Preference number: 6 (lower is better)
Translates to: FAFVGCCSGMQFILS*RGSPCSGGHLPGLG
Trigger: CCCTAGTCCTGGAAGGTGTCCGCCTGAGCAAGGTGAACCTCTCAATGAGAGAATAAACTGCATTCCAGAACAGCATCCAACAAAGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 72 bp TTGGATGCTGTTCTGGAATGCAGTTTATTCTCTCATTaGGAGGTTCACCTTGCTCAGGCGGACACCTTCCAG +
Preference number: 6 (lower is better)
Translates to: LDAVLECSLFSH*EVHLAQADTFQ
Trigger: CTGGAAGGTGTCCGCCTGAGCAAGGTGAACCTCTCAATGAGAGAATAAACTGCATTCCAGAACAGCATCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS GCA 72 bp CCATGGACGCCAGCAACAGCCACGCTCTTCACATTTTaGCTTTGTTGGATGCTGTTCTGGAATGCAGTTTAT +
Preference number: 6 (lower is better)
Translates to: PWTPATATLFTF*LCWMLFWNAVY
Trigger: ATAAACTGCATTCCAGAACAGCATCCAACAAAGGCAAAATGTGAAGAGCGTGGCTGTTGCTGGCGTCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CCA 72 bp CCAGCGACTCAGTTGAAAGCCAAGGTTCCAATATGCTaGCATTGCTGGTCGTCCAATGAGCTCTTGATATTG +
Preference number: 6 (lower is better)
Translates to: PATQLKAKVPIC*HCWSSNELLIL
Trigger: CAATATCAAGAGCTCATTGGACGACCAGCAATGCCAGCATATTGGAACCTTGGCTTTCAACTGAGTCGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 90 bp TCACCCACTGTAACCGCTGTGACAGTGGCGCTCAGCCCAAGGACTTaGATTGTTTTAAACACAAGGGTATTTCCCTCTGGATATGATGAA +
Preference number: 6 (lower is better)
Translates to: SPTVTAVTVALSPRT*IVLNTRVFPSGYDE
Trigger: TTCATCATATCCAGAGGGAAATACCCTTGTGTTTAAAACAATCAAAGTCCTTGGGCTGAGCGCCACTGTCACAGCGGTTACAGTGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 72 bp GCTTTTCCTGATGACTTTGATGCTGAACGGGTTTTCTaGGACCTTGACATCATACAGTGTGTCAGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: AFPDDFDAERVF*DLDIIQCVSCW
Trigger: CCAGCAGCTGACACACTGTATGATGTCAAGGTCTCAGAAAACCCGTTCAGCATCAAAGTCATCAGGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS GCA 72 bp ATTCCAGCGACTCAGTTGAAAGCCAAGGTTCCAATATaGTGGCATTGCTGGTCGTCCAATGAGCTCTTGATA +
Preference number: 6 (lower is better)
Translates to: IPATQLKAKVPI*WHCWSSNELLI
Trigger: TATCAAGAGCTCATTGGACGACCAGCAATGCCAGCATATTGGAACCTTGGCTTTCAACTGAGTCGCTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CCA 72 bp TGCAAAGAAGCACCAAGGAATAATAGTGTTGTTCCATaGACGCCAGCAACAGCCACGCTCTTCACATTTTGC +
Preference number: 6 (lower is better)
Translates to: CKEAPRNNSVVP*TPATATLFTFC
Trigger: GCAAAATGTGAAGAGCGTGGCTGTTGCTGGCGTCCATGGAACAACACTATTATTCCTTGGTGCTTCTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 72 bp GACGCCAGCAACAGCCACGCTCTTCACATTTTGCCTTaGTTGGATGCTGTTCTGGAATGCAGTTTATTCTCT +
Preference number: 6 (lower is better)
Translates to: DASNSHALHILP*LDAVLECSLFS
Trigger: AGAGAATAAACTGCATTCCAGAACAGCATCCAACAAAGGCAAAATGTGAAGAGCGTGGCTGTTGCTGGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 72 bp CAGTGTGGCTTTAAGTCCACTGTTGTCATTCGTGACTaGCGCAGCAGTATAGCCATGGTTATCTGCAAAGAA +
Preference number: 6 (lower is better)
Translates to: QCGFKSTVVIRD*RSSIAMVICKE
Trigger: TTCTTTGCAGATAACCATGGCTATACTGCTGCGTCAGTCACGAATGACAACAGTGGACTTAAAGCCACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CCA 72 bp AGCATCAGGAATATATGCACTCACGTATTTTGTTTCTaGTCTCAAAACAGGAGTGATCAGCAGTGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: SIRNICTHVFCF*SQNRSDQQCRA
Trigger: GGCCCTGCACTGCTGATCACTCCTGTTTTGAGACCAGAAACAAAATACGTGAGTGCATATATTCCTGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 72 bp AGGGAAGTAAAGTGTAGCGGATGGTTAGGTAGTGCCTaGATGTGTTTACCAAAAGAGAGTCTGCTCCCCAAA +
Preference number: 6 (lower is better)
Translates to: REVKCSGWLGSA*MCLPKESLLPK
Trigger: TTTGGGGAGCAGACTCTCTTTTGGTAAACACATCAAGGCACTACCTAACCATCCGCTACACTTTACTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 90 bp GCTGGAAACTTCATTCATGTCAATCCAGAGTCCATCATATTCCACTaGCTGATGGAAAAGATTGCATTCATTTGCCCACCACTCCCAGGT +
Preference number: 6 (lower is better)
Translates to: AGNFIHVNPESIIFH*LMEKIAFICPPLPG
Trigger: ACCTGGGAGTGGTGGGCAAATGAATGCAATCTTTTCCATCAGCAAGTGGAATATGATGGACTCTGGATTGACATGAATGAAGTTTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS GCA 72 bp ACTCAGTTGAAAGCCAAGGTTCCAATATGCTGGCATTaGTGGTCGTCCAATGAGCTCTTGATATTGTTGAAC +
Preference number: 6 (lower is better)
Translates to: TQLKAKVPICWH*WSSNELLILLN
Trigger: GTTCAACAATATCAAGAGCTCATTGGACGACCAGCAATGCCAGCATATTGGAACCTTGGCTTTCAACTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS GCA 72 bp GGAGATGGGATTAGATGGAAGCTTAATTCTAGCACTTaGAGGATTCAACTGAAGTTCTGCTGTTATGCCCGT +
Preference number: 6 (lower is better)
Translates to: GDGIRWKLNSST*RIQLKFCCYAR
Trigger: ACGGGCATAACAGCAGAACTTCAGTTGAATCCTGCAAGTGCTAGAATTAAGCTTCCATCTAATCCCATCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CCA 72 bp CCAGCAACAGCCACGCTCTTCACATTTTGCCTTTGTTaGATGCTGTTCTGGAATGCAGTTTATTCTCTCATT +
Preference number: 6 (lower is better)
Translates to: PATATLFTFCLC*MLFWNAVYSLI
Trigger: AATGAGAGAATAAACTGCATTCCAGAACAGCATCCAACAAAGGCAAAATGTGAAGAGCGTGGCTGTTGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CCA 72 bp CAGTTGAAAGCCAAGGTTCCAATATGCTGGCATTGCTaGTCGTCCAATGAGCTCTTGATATTGTTGAACAAC +
Preference number: 6 (lower is better)
Translates to: QLKAKVPICWHC*SSNELLILLNN
Trigger: GTTGTTCAACAATATCAAGAGCTCATTGGACGACCAGCAATGCCAGCATATTGGAACCTTGGCTTTCAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 72 bp AGGATTCTTTCGGCTTGCTGTTGTTGTTACATCAGGTaGCTGGGTAGGGATGATATAACCTCCTCTAAGATG +
Preference number: 6 (lower is better)
Translates to: RILSACCCCYIR*LGRDDITSSKM
Trigger: CATCTTAGAGGAGGTTATATCATCCCTACCCAGCAACCTGATGTAACAACAACAGCAAGCCGAAAGAATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 72 bp GTCCCAAAAACATGTAAAAATCCAAGATTCCACCAATaGTGCGGTAGGTTAGAGCAGGTGTTGGCTGGAATG +
Preference number: 6 (lower is better)
Translates to: VPKTCKNPRFHQ*CGRLEQVLAGM
Trigger: CATTCCAGCCAACACCTGCTCTAACCTACCGCACAATTGGTGGAATCTTGGATTTTTACATGTTTTTGGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 90 bp GAGTACACCAGAGGACCAATACTGGTATCAAACAAGACTTTGTTGTaGCTTTTCCTGATGACTTTGATGCTGAACGGGTTTTCTGAGACC +
Preference number: 6 (lower is better)
Translates to: EYTRGPILVSNKTLL*LFLMTLMLNGFSET
Trigger: GGTCTCAGAAAACCCGTTCAGCATCAAAGTCATCAGGAAAAGCAACAACAAAGTCTTGTTTGATACCAGTATTGGTCCTCTGGTGTACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 72 bp TTCATGTCAATCCAGAGTCCATCATATTCCACTTGCTaGTGGAAAAGATTGCATTCATTTGCCCACCACTCC +
Preference number: 6 (lower is better)
Translates to: FMSIQSPSYSTC*WKRLHSFAHHS
Trigger: GGAGTGGTGGGCAAATGAATGCAATCTTTTCCATCAGCAAGTGGAATATGATGGACTCTGGATTGACATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS GCA 72 bp ACAGGAGTCACCATAAAAGCTGGACCCCACAGGAACTaGTTGTATATTTCCCAGGTTTCTTTATCATCAAAG +
Preference number: 6 (lower is better)
Translates to: TGVTIKAGPHRN*LYISQVSLSSK
Trigger: CTTTGATGATAAAGAAACCTGGGAAATATACAAGCAGTTCCTGTGGGGTCCAGCTTTTATGGTGACTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS GCA 72 bp TTTCATGTATTTCTGTCGACTGTAATATGTGTTCTGTaGCGGTTCTTGACATGGGAGAATATAACCTCCCCG +
Preference number: 6 (lower is better)
Translates to: FHVFLSTVICVL*RFLTWENITSP
Trigger: CGGGGAGGTTATATTCTCCCATGTCAAGAACCGGCACAGAACACATATTACAGTCGACAGAAATACATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CCA 72 bp TCCCAGATAAGCTTTCCAGTGCTTCTCCTTCGAACCTaGATGCCAAAAGGATTTTCCTTGATTTCTACATCA +
Preference number: 6 (lower is better)
Translates to: SQISFPVLLLRT*MPKGFSLISTS
Trigger: TGATGTAGAAATCAAGGAAAATCCTTTTGGCATCCAGGTTCGAAGGAGAAGCACTGGAAAGCTTATCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 72 bp GGAGTCACCATAAAAGCTGGACCCCACAGGAACTGCTaGTATATTTCCCAGGTTTCTTTATCATCAAAGAAC +
Preference number: 6 (lower is better)
Translates to: GVTIKAGPHRNC*YISQVSLSSKN
Trigger: GTTCTTTGATGATAAAGAAACCTGGGAAATATACAAGCAGTTCCTGTGGGGTCCAGCTTTTATGGTGACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 90 bp AATCTTATTGAAAGCATCAAAAGTGAAAGCAAGATGAGGGTTCATTaGCTGATCATTTTCACCCACTGTAACCGCTGTGACAGTGGCGCT +
Preference number: 6 (lower is better)
Translates to: NLIESIKSESKMRVH*LIIFTHCNRCDSGA
Trigger: AGCGCCACTGTCACAGCGGTTACAGTGGGTGAAAATGATCAGCAAATGAACCCTCATCTTGCTTTCACTTTTGATGCTTTCAATAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 90 bp CCAATGACAGGAGTCACCATAAAAGCTGGACCCCACAGGAACTGCTaGTATATTTCCCAGGTTTCTTTATCATCAAAGAACTCATGCATT +
Preference number: 6 (lower is better)
Translates to: PMTGVTIKAGPHRNC*YISQVSLSSKNSCI
Trigger: AATGCATGAGTTCTTTGATGATAAAGAAACCTGGGAAATATACAAGCAGTTCCTGTGGGGTCCAGCTTTTATGGTGACTCCTGTCATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 90 bp GATTCAACTGAAGTTCTGCTGTTATGCCCGTTGCCAATTTTTGAGTaGAAGTTAACAAATAGGGATTGTGGTTCGAAGGAAAGTAGCAAG +
Preference number: 6 (lower is better)
Translates to: DSTEVLLLCPLPIFE*KLTNRDCGSKESSK
Trigger: CTTGCTACTTTCCTTCGAACCACAATCCCTATTTGTTAACTTCAACTCAAAAATTGGCAACGGGCATAACAGCAGAACTTCAGTTGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 72 bp TCAGCTGCTGGGATTCCATTTCCATCTTTTACAAACTaGTGTGGCACTTCGTATCTCTTGTTATTTGGATCT +
Preference number: 6 (lower is better)
Translates to: SAAGIPFPSFTN*CGTSYLLLFGS
Trigger: AGATCCAAATAACAAGAGATACGAAGTGCCACATCAGTTTGTAAAAGATGGAAATGGAATCCCAGCAGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 72 bp CACCATAGGACTTGCCAGAGTTATCTTCAATGCCCATaGAGAATGTCTGATGCCCATAGAGATTATGATTAT +
Preference number: 6 (lower is better)
Translates to: HHRTCQSYLQCP*RMSDAHRDYDY
Trigger: ATAATCATAATCTCTATGGGCATCAGACATTCTTCATGGGCATTGAAGATAACTCTGGCAAGTCCTATGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 72 bp ACCCAAACATTTTGCTCATTCCCCCTCACATATGTTTaGTATTCGGCACCATTTGCACGTTTGTTTATAGAG +
Preference number: 6 (lower is better)
Translates to: TQTFCSFPLTYV*YSAPFARLFIE
Trigger: CTCTATAAACAAACGTGCAAATGGTGCCGAATATCAAACATATGTGAGGGGGAATGAGCAAAATGTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS GCA 72 bp GACTGGAAAGCCAATTACTTCATGATATTGCTTTGTTaGACCTTCTGGGGTTGGTCCCAAAAACATGTAAAA +
Preference number: 6 (lower is better)
Translates to: DWKANYFMILLC*TFWGWSQKHVK
Trigger: TTTTACATGTTTTTGGGACCAACCCCAGAAGGTGCAACAAAGCAATATCATGAAGTAATTGGCTTTCCAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS GCA 72 bp TGTGGAATTCCTAAAGAAGTCTGGAAAAGCTACATGTaGTCTGGAAGCGTTAACAGCTTCATCTTCTGTTAT +
Preference number: 6 (lower is better)
Translates to: CGIPKEVWKSYM*SGSVNSFIFCY
Trigger: ATAACAGAAGATGAAGCTGTTAACGCTTCCAGAGCACATGTAGCTTTTCCAGACTTCTTTAGGAATTCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CCA 72 bp TGCTGGGATTCCATTTCCATCTTTTACAAACTGATGTaGCACTTCGTATCTCTTGTTATTTGGATCTGTGAG +
Preference number: 6 (lower is better)
Translates to: CWDSISIFYKLM*HFVSLVIWICE
Trigger: CTCACAGATCCAAATAACAAGAGATACGAAGTGCCACATCAGTTTGTAAAAGATGGAAATGGAATCCCAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 72 bp AGAGGACCAATACTGGTATCAAACAAGACTTTGTTGTaGCTTTTCCTGATGACTTTGATGCTGAACGGGTTT +
Preference number: 6 (lower is better)
Translates to: RGPILVSNKTLL*LFLMTLMLNGF
Trigger: AAACCCGTTCAGCATCAAAGTCATCAGGAAAAGCAACAACAAAGTCTTGTTTGATACCAGTATTGGTCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 72 bp CACCCAAACATTTTGCTCATTCCCCCTCACATATGTTaGATATTCGGCACCATTTGCACGTTTGTTTATAGA +
Preference number: 6 (lower is better)
Translates to: HPNILLIPPHIC*IFGTICTFVYR
Trigger: TCTATAAACAAACGTGCAAATGGTGCCGAATATCAAACATATGTGAGGGGGAATGAGCAAAATGTTTGGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 72 bp GAAGTTCTGCTGTTATGCCCGTTGCCAATTTTTGAGTaGAAGTTAACAAATAGGGATTGTGGTTCGAAGGAA +
Preference number: 6 (lower is better)
Translates to: EVLLLCPLPIFE*KLTNRDCGSKE
Trigger: TTCCTTCGAACCACAATCCCTATTTGTTAACTTCAACTCAAAAATTGGCAACGGGCATAACAGCAGAACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 72 bp GCCTACATCTGGATAACAAGTGAATTTCTCATTGTCTaGGAAACTTTGCGTCGTCCATCTAACTATAAAGGT +
Preference number: 6 (lower is better)
Translates to: AYIWITSEFLIV*ETLRRPSNYKG
Trigger: ACCTTTATAGTTAGATGGACGACGCAAAGTTTCTCAGACAATGAGAAATTCACTTGTTATCCAGATGTAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS TCA 72 bp TTCCTTTTGCTGTTTGGTTGTCATCTGCAGCTACGATaGGTTTCATGTATTTCTGTCGACTGTAATATGTGT +
Preference number: 6 (lower is better)
Translates to: FLLLFGCHLQLR*VSCISVDCNMC
Trigger: ACACATATTACAGTCGACAGAAATACATGAAACTCATCGTAGCTGCAGATGACAACCAAACAGCAAAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 72 bp CACTTGGAAGTCTTGTTGAAATCTGCAAATATTGGTTaGAGTACACCAGAGGACCAATACTGGTATCAAACA +
Preference number: 6 (lower is better)
Translates to: HLEVLLKSANIG*STPEDQYWYQT
Trigger: TGTTTGATACCAGTATTGGTCCTCTGGTGTACTCAAACCAATATTTGCAGATTTCAACAAGACTTCCAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 72 bp TTGCAGGATTCAACTGAAGTTCTGCTGTTATGCCCGTaGCCAATTTTTGAGTTGAAGTTAACAAATAGGGAT +
Preference number: 6 (lower is better)
Translates to: LQDSTEVLLLCP*PIFELKLTNRD
Trigger: ATCCCTATTTGTTAACTTCAACTCAAAAATTGGCAACGGGCATAACAGCAGAACTTCAGTTGAATCCTGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CCA 72 bp TATTCACTTGGAAGTCTTGTTGAAATCTGCAAATATTaGTTTGAGTACACCAGAGGACCAATACTGGTATCA +
Preference number: 6 (lower is better)
Translates to: YSLGSLVEICKY*FEYTRGPILVS
Trigger: TGATACCAGTATTGGTCCTCTGGTGTACTCAAACCAATATTTGCAGATTTCAACAAGACTTCCAAGTGAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8
CDS CAA 72 bp TGGTCGTCCAATGAGCTCTTGATATTGTTGAACAACTaGTTCTGGTGTGTCTCCAAGAAATATATAAAAGTC +
Preference number: 6 (lower is better)
Translates to: WSSNELLILLNN*FWCVSKKYIKV
Trigger: GACTTTTATATATTTCTTGGAGACACACCAGAACAAGTTGTTCAACAATATCAAGAGCTCATTGGACGACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094190.5
ENSMUST00000167334.8