Pregenerated sensors for SIRT7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025138Ensembl transcript IDs: ENSMUST00000080202.12, ENSMUST00000106183.3, ENSMUST00000146809.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGGAGGCCCTGAGACTAGCCTGGAGAGTGAGGTAAGGCAGTGGTaGACTCTCCTGCTGGCCAGGCCTGGGAAGGGCCGGAGCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: EGGPETSLESEVRQW*TLLLARPGKGRSSS Trigger: AGAAGAGCTCCGGCCCTTCCCAGGCCTGGCCAGCAGGAGAGTCCACCACTGCCTTACCTCACTCTCCAGGCTAGTCTCAGGGCCTCCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR CCA 90 bp | AAAGAGGGAGGCCCTGAGACTAGCCTGGAGAGTGAGGTAAGGCAGTaGTGGACTCTCCTGCTGGCCAGGCCTGGGAAGGGCCGGAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: KEGGPETSLESEVRQ*WTLLLARPGKGRSS Trigger: AGAGCTCCGGCCCTTCCCAGGCCTGGCCAGCAGGAGAGTCCACCACTGCCTTACCTCACTCTCCAGGCTAGTCTCAGGGCCTCCCTCTTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR TCA 90 bp | CCGGAGGGGGCACTCTCGCCTTCACGGCGACACGGGCGGAGCCCCTaGACAAGGGTCAAGCCATCTGCAAAGTGCCAACTGTTCTTTGTC | + |
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Preference number: 1 (lower is better) Translates to: PEGALSPSRRHGRSP*TRVKPSAKCQLFFV Trigger: GACAAAGAACAGTTGGCACTTTGCAGATGGCTTGACCCTTGTTCAGGGGCTCCGCCCGTGTCGCCGTGAAGGCGAGAGTGCCCCCTCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR CCA 90 bp | CGGGGCAGTCACAGCAGTGCAAGAGAGCCTTTCCACAAGGACAAATaGCTAAAGACGACCGTCACCGCGAAGCCGGCACCCACTAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: RGSHSSAREPFHKDK*LKTTVTAKPAPTRA Trigger: GGCTCTAGTGGGTGCCGGCTTCGCGGTGACGGTCGTCTTTAGCCATTTGTCCTTGTGGAAAGGCTCTCTTGCACTGCTGTGACTGCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR GCA 90 bp | TTCACGGCGACACGGGCGGAGCCCCTGAACAAGGGTCAAGCCATCTaGAAAGTGCCAACTGTTCTTTGTCAACTCCGGGCTATGCCACTT | + |
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Preference number: 1 (lower is better) Translates to: FTATRAEPLNKGQAI*KVPTVLCQLRAMPL Trigger: AAGTGGCATAGCCCGGAGTTGACAAAGAACAGTTGGCACTTTGCAGATGGCTTGACCCTTGTTCAGGGGCTCCGCCCGTGTCGCCGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
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| 3UTR GCA 90 bp | AAGCCATCTGCAAAGTGCCAACTGTTCTTTGTCAACTCCGGGCTATaGCACTTTCTTCCTTTTTGCACGCTTGGCACAACCCCTGCCAAA | + |
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Preference number: 1 (lower is better) Translates to: KPSAKCQLFFVNSGL*HFLPFCTLGTTPAK Trigger: TTTGGCAGGGGTTGTGCCAAGCGTGCAAAAAGGAAGAAAGTGGCATAGCCCGGAGTTGACAAAGAACAGTTGGCACTTTGCAGATGGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
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| 3UTR GCA 90 bp | TTAATAAGACTTGCTCAGACTGGAGGCTTAGTTAGATTCTCCCTGTaGCGCATACCCAATACAGAAAAAGGCTTCTATAAAGTGAACACT | + |
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Preference number: 1 (lower is better) Translates to: LIRLAQTGGLVRFSL*RIPNTEKGFYKVNT Trigger: AGTGTTCACTTTATAGAAGCCTTTTTCTGTATTGGGTATGCGGCACAGGGAGAATCTAACTAAGCCTCCAGTCTGAGCAAGTCTTATTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| 3UTR CAA 90 bp | TGCTGGCCAGGCCTGGGAAGGGCCGGAGCTCTTCTCACAGAGGCCTaGCTGCCACCTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: CWPGLGRAGALLTEA*LPPLYRGEQEGGVL Trigger: AAGGACACCTCCCTCCTGTTCACCCCTGTACAAAGGTGGCAGCAAGGCCTCTGTGAGAAGAGCTCCGGCCCTTCCCAGGCCTGGCCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAGCCTTTCCACAAGGACAAATGGCTAAAGACGACCGTCACCGCGAAGCCGGTGGACTCTCCTGCTaGCCAGGCCTGGGAAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: KRAFPQGQMAKDDRHREAGGLSC*PGLGRA Trigger: GGCCCTTCCCAGGCCTGGCCAGCAGGAGAGTCCACC...GGCTTCGCGGTGACGGTCGTCTTTAGCCATTTGTCCTTGTGGAAAGGCTCTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTCACAGCAGTGCAAGAGAGCCTTTCCACAAGGACAAATGGCTAAAGACGACCCTGCTGGCCAGGCCTaGGAAGGGCCGGAGCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: QSQQCKRAFPQGQMAKDDPAGQA*EGPELF Trigger: GAAGAGCTCCGGCCCTTCCCAGGCCTGGCCAGCAGG...GTCGTCTTTAGCCATTTGTCCTTGTGGAAAGGCTCTCTTGCACTGCTGTGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGGTGAACAGGAGGGAGGTGTCCTTGAAGATCAAGCCCATAGCGGGGCAGTCACTCTGGTCCCCAGGTaGGGCTTCTTCTCTGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: RGEQEGGVLEDQAHSGAVTLVPR*GFFSAS Trigger: AGAAGCAGAGAAGAAGCCCCACCTGGGGACCAGAGT...GACTGCCCCGCTATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
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| 3UTR CAA 90 bp | CCTTGCTGCCACCTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTaGAAGATCAAGCCCATAGCGGGGCAGTCACAGCAGTGCAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: PCCHLCTGVNRREVS*KIKPIAGQSQQCKR Trigger: TCTCTTGCACTGCTGTGACTGCCCCGCTATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAAAGGTGGCAGCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTACAGGGGTGAACAGGAGGGAGGTGTCCTTGAAGATCAAGCCCATAGCGGGGCTTGGCACAACCCCTaGCAAACCAGCCTCCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: LYRGEQEGGVLEDQAHSGAWHNP*QTSLLG Trigger: TCCTAGGAGGCTGGTTTGGCAGGGGTTGTGCCAAGC...CCCGCTATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCCTGAGACTAGCCTGGAGAGTGAGGTAAGGCAGTGGTGGACTCTCCTGCTGAGTGACTTCCTACTGTaGCTGCCTTCTTCACCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GPETSLESEVRQWWTLLLSDFLL*LPSSPA Trigger: TGCTGGTGAAGAAGGCAGCCACAGTAGGAAGTCACT...CAGCAGGAGAGTCCACCACTGCCTTACCTCACTCTCCAGGCTAGTCTCAGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGAGTGAGGTAAGGCAGTGGTGGACTCTCCTGCTGGCCAGGCCTGGGAAGAAGGGTCAAGCCATCTaGAAAGTGCCAACTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LESEVRQWWTLLLARPGKKGQAI*KVPTVL Trigger: AAGAACAGTTGGCACTTTGCAGATGGCTTGACCCTT...CTTCCCAGGCCTGGCCAGCAGGAGAGTCCACCACTGCCTTACCTCACTCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR-3UTR GCA 90 bp | ACGGGCGGAGCCCCTGAACAAGGGTCAAGCCATCTGCAAAGTGCCAACTGTTCTGGGCAGTCACAGCAGTaGAAGAGAGCCTTTCCACAA | + |
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Preference number: 2 (lower is better) Translates to: TGGAPEQGSSHLQSANCSGQSQQ*KRAFPQ Trigger: TTGTGGAAAGGCTCTCTTGCACTGCTGTGACTGCCC...AGAACAGTTGGCACTTTGCAGATGGCTTGACCCTTGTTCAGGGGCTCCGCCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGCCTTGCTGCCACCTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTTGAAGGGCAGTCACAGCAGTaGAAGAGAGCCTTTCCACAA | + |
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Preference number: 2 (lower is better) Translates to: EALLPPLYRGEQEGGVLEGQSQQ*KRAFPQ Trigger: TTGTGGAAAGGCTCTCTTGCACTGCTGTGACTGCCC...TTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAAAGGTGGCAGCAAGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGCTCTTCTCACAGAGGCCTTGCTGCCACCTTTGTACAGGGGTGAACAGGAGGTCAACTCCGGGCTATaGCACTTTCTTCCTTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: GALLTEALLPPLYRGEQEVNSGL*HFLPFC Trigger: GCAAAAAGGAAGAAAGTGGCATAGCCCGGAGTTGAC...CTCCTGTTCACCCCTGTACAAAGGTGGCAGCAAGGCCTCTGTGAGAAGAGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGAGCCTTTCCACAAGGACAAATGGCTAAAGACGACCGTCACCGCGAAGCCTCCTTTTTGCACGCTTaGCACAACCCCTGCCAAACC | + |
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Preference number: 2 (lower is better) Translates to: KRAFPQGQMAKDDRHREASFLHA*HNPCQT Trigger: GGTTTGGCAGGGGTTGTGCCAAGCGTGCAAAAAGGA...GGCTTCGCGGTGACGGTCGTCTTTAGCCATTTGTCCTTGTGGAAAGGCTCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
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| 3UTR-3UTR TCA 90 bp | AGACTTGCTCAGACTGGAGGCTTAGTTAGATTCTCCCTGTGCCGCATACCCAATACCTTTGTACAGGGGTaGACAGGAGGGAGGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: RLAQTGGLVRFSLCRIPNTFVQG*TGGRCP Trigger: AGGACACCTCCCTCCTGTTCACCCCTGTACAAAGGT...ATTGGGTATGCGGCACAGGGAGAATCTAACTAAGCCTCCAGTCTGAGCAAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| 3UTR-3UTR GCA 90 bp | GAGGCCTTGCTGCCACCTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTTGAAAAGGGTCAAGCCATCTaGAAAGTGCCAACTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: EALLPPLYRGEQEGGVLEKGQAI*KVPTVL Trigger: AAGAACAGTTGGCACTTTGCAGATGGCTTGACCCTT...TTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAAAGGTGGCAGCAAGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR CAA 90 bp | GCCCCTGAACAAGGGTCAAGCCATCTGCAAAGTGCCAACTGTTCTTaGTCAACTCCGGGCTATGCCACTTTCTTCCTTTTTGCACGCTTG | + |
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Preference number: 2 (lower is better) Translates to: APEQGSSHLQSANCS*STPGYATFFLFARL Trigger: CAAGCGTGCAAAAAGGAAGAAAGTGGCATAGCCCGGAGTTGACAAAGAACAGTTGGCACTTTGCAGATGGCTTGACCCTTGTTCAGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTTGAAGATCAAGCCCATAGCGCTTCTTCTCTGCTTCTaGATAGTGACTTCCTACTGT | + |
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Preference number: 2 (lower is better) Translates to: LCTGVNRREVSLKIKPIALLLCF*IVTSYC Trigger: ACAGTAGGAAGTCACTATGCAGAAGCAGAGAAGAAG...CGCTATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
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| 3UTR CCA 72 bp | CCTGAGACTAGCCTGGAGAGTGAGGTAAGGCAGTGGTaGACTCTCCTGCTGGCCAGGCCTGGGAAGGGCCGG | + |
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Preference number: 3 (lower is better) Translates to: PETSLESEVRQW*TLLLARPGKGR Trigger: CCGGCCCTTCCCAGGCCTGGCCAGCAGGAGAGTCCACCACTGCCTTACCTCACTCTCCAGGCTAGTCTCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR CCA 72 bp | GGCCCTGAGACTAGCCTGGAGAGTGAGGTAAGGCAGTaGTGGACTCTCCTGCTGGCCAGGCCTGGGAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: GPETSLESEVRQ*WTLLLARPGKG Trigger: GCCCTTCCCAGGCCTGGCCAGCAGGAGAGTCCACCACTGCCTTACCTCACTCTCCAGGCTAGTCTCAGGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR TCA 72 bp | GCACTCTCGCCTTCACGGCGACACGGGCGGAGCCCCTaGACAAGGGTCAAGCCATCTGCAAAGTGCCAACTG | + |
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Preference number: 3 (lower is better) Translates to: ALSPSRRHGRSP*TRVKPSAKCQL Trigger: CAGTTGGCACTTTGCAGATGGCTTGACCCTTGTTCAGGGGCTCCGCCCGTGTCGCCGTGAAGGCGAGAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR GCA 72 bp | GCCTGGGAAGGGCCGGAGCTCTTCTCACAGAGGCCTTaGTGCCACCTTTGTACAGGGGTGAACAGGAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: AWEGPELFSQRP*CHLCTGVNRRE Trigger: CTCCCTCCTGTTCACCCCTGTACAAAGGTGGCAGCAAGGCCTCTGTGAGAAGAGCTCCGGCCCTTCCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR GCA 72 bp | TGGGAAGGGCCGGAGCTCTTCTCACAGAGGCCTTGCTaGCACCTTTGTACAGGGGTGAACAGGAGGGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: WEGPELFSQRPC*HLCTGVNRREV Trigger: CACCTCCCTCCTGTTCACCCCTGTACAAAGGTGGCAGCAAGGCCTCTGTGAGAAGAGCTCCGGCCCTTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR-3UTR CAA 90 bp | GGCCCTGAGACTAGCCTGGAGAGTGAGGTAAGGCAGTGGTGGACTCTCCTGCTGAGGAGGGAGGTGTCCTaGAAGATCAAGCCCATAGCG | + |
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Preference number: 3 (lower is better) Translates to: GPETSLESEVRQWWTLLLRREVS*KIKPIA Trigger: CGCTATGGGCTTGATCTTCAAGGACACCTCCCTCCT...CAGCAGGAGAGTCCACCACTGCCTTACCTCACTCTCCAGGCTAGTCTCAGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGAGAGTGAGGTAAGGCAGTGGTGGACTCTCCTGCTGGCCAGGCCTGGGAAGCCACTTTCTTCCTTTTaGCACGCTTGGCACAACCCC | + |
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Preference number: 3 (lower is better) Translates to: LESEVRQWWTLLLARPGKPLSSF*HAWHNP Trigger: GGGGTTGTGCCAAGCGTGCAAAAAGGAAGAAAGTGG...CTTCCCAGGCCTGGCCAGCAGGAGAGTCCACCACTGCCTTACCTCACTCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGCTCTTCTCACAGAGGCCTTGCTGCCACCTTTGTACAGGGGTGAACAGGAGCTTCTCACAGAGGCCTaGCTGCCACCTTTGTACAGG | + |
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Preference number: 3 (lower is better) Translates to: GALLTEALLPPLYRGEQELLTEA*LPPLYR Trigger: CCTGTACAAAGGTGGCAGCAAGGCCTCTGTGAGAAG...CTCCTGTTCACCCCTGTACAAAGGTGGCAGCAAGGCCTCTGTGAGAAGAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR GCA 72 bp | CACTCTGGTCCCCAGGTGGGGCTTCTTCTCTGCTTCTaGATAGTGACTTCCTACTGTGGCTGCCTTCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: HSGPQVGLLLCF*IVTSYCGCLLH Trigger: GTGAAGAAGGCAGCCACAGTAGGAAGTCACTATGCAGAAGCAGAGAAGAAGCCCCACCTGGGGACCAGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
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| 3UTR GCA 72 bp | TTTGTCAACTCCGGGCTATGCCACTTTCTTCCTTTTTaGACGCTTGGCACAACCCCTGCCAAACCAGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: FVNSGLCHFLPF*TLGTTPAKPAS Trigger: GGAGGCTGGTTTGGCAGGGGTTGTGCCAAGCGTGCAAAAAGGAAGAAAGTGGCATAGCCCGGAGTTGACAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
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| CDS-3UTR GCA 90 bp | GGCGACACGGGCGGAGCCCCTGAACAAGGGTCAAGCCATCTGCAAAGTGCCAACAGGCGCTCCCGCTGCTaGTCCTCCCGCAGCCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: GDTGGAPEQGSSHLQSANRRSRC*SSRSLR Trigger: CCGGAGGCTGCGGGAGGAGCAGCAGCGGGAGCGCCT...GTTGGCACTTTGCAGATGGCTTGACCCTTGTTCAGGGGCTCCGCCCGTGTCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS-3UTR CCA 90 bp | GGCCCTGAGACTAGCCTGGAGAGTGAGGTAAGGCAGTGGTGGACTCTCCTGCTGAGGATGCGTGACACCTaGCGGAGGCGCTCCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GPETSLESEVRQWWTLLLRMRDT*RRRSRC Trigger: GCAGCGGGAGCGCCTCCGCCAGGTGTCACGCATCCT...CAGCAGGAGAGTCCACCACTGCCTTACCTCACTCTCCAGGCTAGTCTCAGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS-3UTR GCA 90 bp | CCTTTCCACAAGGACAAATGGCTAAAGACGACCGTCACCGCGAAGCCGGCACCCCCGCCTTCCTCAGGATaGGTGACACCTGGCGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: PFHKDKWLKTTVTAKPAPPPSSG*VTPGGG Trigger: GCCTCCGCCAGGTGTCACGCATCCTGAGGAAGGCGG...GGGTGCCGGCTTCGCGGTGACGGTCGTCTTTAGCCATTTGTCCTTGTGGAAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS-3UTR CCA 90 bp | GGAAGGGCCGGAGCTCTTCTCACAGAGGCCTTGCTGCCACCTTTGTACAGGGGTTCACACACCTCCTCCTaGCGGCGCTTGAGGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: GRAGALLTEALLPPLYRGSHTSS*RRLRPS Trigger: TGAGGGCCTCAAGCGCCGCCAGGAGGAGGTGTGTGA...ACCCCTGTACAAAGGTGGCAGCAAGGCCTCTGTGAGAAGAGCTCCGGCCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS-3UTR CCA 90 bp | AGGGGTGAACAGGAGGGAGGTGTCCTTGAAGATCAAGCCCATAGCGGGGCAGTCTGGGTCCCGCACTTGTaGCAGGTCCGGCCTGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: RGEQEGGVLEDQAHSGAVWVPHL*QVRPVR Trigger: CCTGACAGGCCGGACCTGCCACAAGTGCGGGACCCA...GACTGCCCCGCTATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| CDS-3UTR GCA 90 bp | GAGGCCTTGCTGCCACCTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTTGAACCCGCTCAGCAGCTTTaGGCTCCGAGCGGCTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: EALLPPLYRGEQEGGVLEPAQQL*APSGSD Trigger: GTCTGAGCCGCTCGGAGCGCAAAGCTGCTGAGCGGG...TTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAAAGGTGGCAGCAAGGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS-3UTR GCA 90 bp | AGGGGTGAACAGGAGGGAGGTGTCCTTGAAGATCAAGCCCATAGCGGGGCAGTCAGCAGCCTCGGTCGCTaGCTCCCAGTTCAGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RGEQEGGVLEDQAHSGAVSSLGR*LPVQRL Trigger: CAGCCTCTGAACTGGGAGGCAGCGACCGAGGCTGCT...GACTGCCCCGCTATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| CDS-3UTR TCA 90 bp | CCTTTCCACAAGGACAAATGGCTAAAGACGACCGTCACCGCGAAGCCGGCACCCATTCCCATGGAGCTCTaGGATGGCGGTCCGGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: PFHKDKWLKTTVTAKPAPIPMEL*DGGPGQ Trigger: TTGCCCCGGACCGCCATCTCAGAGCTCCATGGGAAT...GGGTGCCGGCTTCGCGGTGACGGTCGTCTTTAGCCATTTGTCCTTGTGGAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS-3UTR CCA 90 bp | CGGGCGGAGCCCCTGAACAAGGGTCAAGCCATCTGCAAAGTGCCAACTGTTCTTCGGGTGATGCTCATGTaGGTGAGGGTAGGCTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: RAEPLNKGQAICKVPTVLRVMLM*VRVGSA Trigger: AGCGGAGCCTACCCTCACCCACATGAGCATCACCCG...AAGAACAGTTGGCACTTTGCAGATGGCTTGACCCTTGTTCAGGGGCTCCGCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS-3UTR CCA 90 bp | GGCCCTGAGACTAGCCTGGAGAGTGAGGTAAGGCAGTGGTGGACTCTCCTGCTGCCCCAAAGTGCACAATaGTATCCCGAAGCTGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GPETSLESEVRQWWTLLLPQSAQ*YPEAGS Trigger: GGACCCAGCTTCGGGATACCATTGTGCACTTTGGGG...CAGCAGGAGAGTCCACCACTGCCTTACCTCACTCTCCAGGCTAGTCTCAGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| CDS-3UTR GCA 90 bp | CACCTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTTGAAGATCAAGCCCATACTCCGCGCTGCGCTCTaGAGCCGCCTTCCTCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: HLCTGVNRREVSLKIKPILRAAL*SRLPQD Trigger: ATCCTGAGGAAGGCGGCTGCAGAGCGCAGCGCGGAG...TATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAAAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS-3UTR CCA 90 bp | GGTAAGGCAGTGGTGGACTCTCCTGCTGGCCAGGCCTGGGAAGGGCCGGAGCTCTTAGTACCTTCAAGCTaGACCCTAAACACAGGATTG | + |
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Preference number: 4 (lower is better) Translates to: GKAVVDSPAGQAWEGPELLVPSS*TLNTGL Trigger: CAATCCTGTGTTTAGGGTCCAGCTTGAAGGTACTAA...GAGCTCCGGCCCTTCCCAGGCCTGGCCAGCAGGAGAGTCCACCACTGCCTTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| CDS-3UTR CCA 90 bp | GGAAGGGCCGGAGCTCTTCTCACAGAGGCCTTGCTGCCACCTTTGTACAGGGGTTCATCACACTTCCCATaGAGTTTCAGGGCAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRAGALLTEALLPPLYRGSSHFP*SFRAAQ Trigger: CTGGGCTGCCCTGAAACTCCATGGGAAGTGTGATGA...ACCCCTGTACAAAGGTGGCAGCAAGGCCTCTGTGAGAAGAGCTCCGGCCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCTCTTCTCACAGAGGCCTTGCTGCCACCTTTGTACAGGGGTGAACAGGAGCCCCTCTCCCCAAAGTaGACAATGGTATCCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GALLTEALLPPLYRGEQEPLSPK*TMVSRS Trigger: GCTTCGGGATACCATTGTGCACTTTGGGGAGAGGGG...CTCCTGTTCACCCCTGTACAAAGGTGGCAGCAAGGCCTCTGTGAGAAGAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
||
| CDS-3UTR GCA 90 bp | CACCTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTTGAAGATCAAGCCCATAAGCAGCCTCGGTCGCTaGCTCCCAGTTCAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLCTGVNRREVSLKIKPISSLGR*LPVQRL Trigger: CAGCCTCTGAACTGGGAGGCAGCGACCGAGGCTGCT...TATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCTGAGACTAGCCTGGAGAGTGAGGTAAGGCAGTGGTGGACTCTCCTGCTGACACAGGATTGTGTCTaGTTTGCTAGCAGCCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPETSLESEVRQWWTLLLTQDCV*FASSLG Trigger: ACCGAGGCTGCTAGCAAAGCAGACACAATCCTGTGT...CAGCAGGAGAGTCCACCACTGCCTTACCTCACTCTCCAGGCTAGTCTCAGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
||
| CDS-3UTR GCA 90 bp | ACGGGCGGAGCCCCTGAACAAGGGTCAAGCCATCTGCAAAGTGCCAACTGTTCTTCAGTGACACCAAGCTaGAGGGGACACCAAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGGAPEQGSSHLQSANCSSVTPS*RGHQAA Trigger: TGCAGCTTGGTGTCCCCTGCAGCTTGGTGTCACTGA...AGAACAGTTGGCACTTTGCAGATGGCTTGACCCTTGTTCAGGGGCTCCGCCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
||
| 3UTR CAA 72 bp | CACCTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTaGAAGATCAAGCCCATAGCGGGGCAGTCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLCTGVNRREVS*KIKPIAGQSQQ Trigger: CTGCTGTGACTGCCCCGCTATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
||
| CDS-3UTR CCA 90 bp | TGCCACCTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTTGAAGATCAAGCCCCCCCAAAGTGCACAATaGTATCCCGAAGCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CHLCTGVNRREVSLKIKPPQSAQ*YPEAGS Trigger: GGACCCAGCTTCGGGATACCATTGTGCACTTTGGGG...GGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAAAGGTGGCA 56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGTGAACAGGAGGGAGGTGTCCTTGAAGATCAAGCCCATAGCGGGGCAGTCAGTGACTTCCTACTGTaGCTGCCTTCTTCACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGEQEGGVLEDQAHSGAVSDFLL*LPSSPA Trigger: TGCTGGTGAAGAAGGCAGCCACAGTAGGAAGTCACT...GACTGCCCCGCTATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
||
| CDS-3UTR TCA 90 bp | GAGGCCTTGCTGCCACCTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTTGAAACAGGCCTTCCTTTCTaGAGCAGTGTCCATACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EALLPPLYRGEQEGGVLETGLPF*SSVHTP Trigger: TGGAGTATGGACACTGCTTCAGAAAGGAAGGCCTGT...TTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAAAGGTGGCAGCAAGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
||
| CDS-3UTR GCA 90 bp | CCTTTCCACAAGGACAAATGGCTAAAGACGACCGTCACCGCGAAGCCGGCACCCTGTTGCACCAGCTTTTaGTCATGCAAACGGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PFHKDKWLKTTVTAKPAPCCTSF*SCKRVM Trigger: CATCACCCGTTTGCATGAGCAAAAGCTGGTGCAACA...GGGTGCCGGCTTCGCGGTGACGGTCGTCTTTAGCCATTTGTCCTTGTGGAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
||
| CDS-3UTR GCA 90 bp | AGCAGTGCAAGAGAGCCTTTCCACAAGGACAAATGGCTAAAGACGACCGTCACCGCTTGGCACAACCCCTaGCAAACCAGCCTCCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSAREPFHKDKWLKTTVTAWHNP*QTSLLG Trigger: TCCTAGGAGGCTGGTTTGGCAGGGGTTGTGCCAAGC...GGTGACGGTCGTCTTTAGCCATTTGTCCTTGTGGAAAGGCTCTCTTGCACTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGCAAGAGAGCCTTTCCACAAGGACAAATGGCTAAAGACGACCGTCACCATGGTATCCCGAAGCTaGGTCCCGCACTTGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSAREPFHKDKWLKTTVTMVSRS*VPHLWQ Trigger: CTGCCACAAGTGCGGGACCCAGCTTCGGGATACCAT...GGTGACGGTCGTCTTTAGCCATTTGTCCTTGTGGAAAGGCTCTCTTGCACTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTTGAAGATCAAGCCCATAATGGTATCCCGAAGCTaGGTCCCGCACTTGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLCTGVNRREVSLKIKPIMVSRS*VPHLWQ Trigger: CTGCCACAAGTGCGGGACCCAGCTTCGGGATACCAT...TATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
||
| CDS-3UTR CCA 90 bp | ACTCCGGGCTATGCCACTTTCTTCCTTTTTGCACGCTTGGCACAACCCCTGCCATCATCACACTTCCCATaGAGTTTCAGGGCAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPGYATFFLFARLAQPLPSSHFP*SFRAAQ Trigger: CTGGGCTGCCCTGAAACTCCATGGGAAGTGTGATGA...TGGCAGGGGTTGTGCCAAGCGTGCAAAAAGGAAGAAAGTGGCATAGCCCGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTTGAAGATCAAGCCCATAGCGACTCTGGTCCCCAGGTaGGGCTTCTTCTCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCTGVNRREVSLKIKPIATLVPR*GFFSAS Trigger: AGAAGCAGAGAAGAAGCCCCACCTGGGGACCAGAGT...CGCTATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
||
| 3UTR CAA 72 bp | ACTCCGGGCTATGCCACTTTCTTCCTTTTTGCACGCTaGGCACAACCCCTGCCAAACCAGCCTCCTAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: TPGYATFFLFAR*AQPLPNQPPRI Trigger: TATCCTAGGAGGCTGGTTTGGCAGGGGTTGTGCCAAGCGTGCAAAAAGGAAGAAAGTGGCATAGCCCGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
||
| CDS-3UTR GCA 90 bp | ATAGCGGGGCAGTCACAGCAGTGCAAGAGAGCCTTTCCACAAGGACAAATGGCTATCTGGGATAGAAGCTaGTGTGCTGATTCCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: IAGQSQQCKRAFPQGQMAIWDRS*CADSSA Trigger: GGCGCTGGAATCAGCACAGCAGCTTCTATCCCAGAT...AGCCATTTGTCCTTGTGGAAAGGCTCTCTTGCACTGCTGTGACTGCCCCGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS-3UTR GCA 90 bp | AGACTTGCTCAGACTGGAGGCTTAGTTAGATTCTCCCTGTGCCGCATACCCAATTCCCAGTTCAGAGGCTaGCCTAATGTCCCCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLAQTGGLVRFSLCRIPNSQFRG*PNVPLS Trigger: GGAGAGGGGGACATTAGGGCAGCCTCTGAACTGGGA...ATTGGGTATGCGGCACAGGGAGAATCTAACTAAGCCTCCAGTCTGAGCAAGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
||
| CDS-3UTR GCA 90 bp | CACTCTGGTCCCCAGGTGGGGCTTCTTCTCTGCTTCTGCATAGTGACTTCCTACACACAGGATTGTGTCTaGTTTGCTAGCAGCCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSGPQVGLLLCFCIVTSYTQDCV*FASSLG Trigger: ACCGAGGCTGCTAGCAAAGCAGACACAATCCTGTGT...GTAGGAAGTCACTATGCAGAAGCAGAGAAGAAGCCCCACCTGGGGACCAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
||
| CDS-3UTR GCA 90 bp | AGACTTGCTCAGACTGGAGGCTTAGTTAGATTCTCCCTGTGCCGCATACCCAATCCCCTCTCCCCAAAGTaGACAATGGTATCCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLAQTGGLVRFSLCRIPNPLSPK*TMVSRS Trigger: GCTTCGGGATACCATTGTGCACTTTGGGGAGAGGGG...ATTGGGTATGCGGCACAGGGAGAATCTAACTAAGCCTCCAGTCTGAGCAAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS-3UTR GCA 90 bp | CCATCTGCAAAGTGCCAACTGTTCTTTGTCAACTCCGGGCTATGCCACTTTCTTTCCCAGTTCAGAGGCTaGCCTAATGTCCCCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSAKCQLFFVNSGLCHFLSQFRG*PNVPLS Trigger: GGAGAGGGGGACATTAGGGCAGCCTCTGAACTGGGA...AAGAAAGTGGCATAGCCCGGAGTTGACAAAGAACAGTTGGCACTTTGCAGATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGTGAACAGGAGGGAGGTGTCCTTGAAGATCAAGCCCATAGCGGGGCAGTCCTTCTTCTCTGCTTCTaGATAGTGACTTCCTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGEQEGGVLEDQAHSGAVLLLCF*IVTSYC Trigger: ACAGTAGGAAGTCACTATGCAGAAGCAGAGAAGAAG...GACTGCCCCGCTATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS-3UTR CCA 90 bp | CCACCTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTTGAAGATCAAGCCCATAGGACCCCGATAATCTaGGATAGAAGCTGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPLYRGEQEGGVLEDQAHRTPII*DRSCCA Trigger: AGCACAGCAGCTTCTATCCCAGATTATCGGGGTCCT...ATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAAAGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS-3UTR CCA 90 bp | CACCTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTTGAAGATCAAGCCCATACGCCAAGGAGAAGATTaGATCCTGCCACCGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HLCTGVNRREVSLKIKPIRQGED*ILPPVV Trigger: TACAACCGGTGGCAGGATCCAATCTTCTCCTTGGCG...TATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAAAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS-3UTR CCA 90 bp | CAGTCACAGCAGTGCAAGAGAGCCTTTCCACAAGGACAAATGGCTAAAGACGACTCCTTTTTGCACGCTTaGCACAACCCCTGCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: QSQQCKRAFPQGQMAKDDSFLHA*HNPCQT Trigger: GGTTTGGCAGGGGTTGTGCCAAGCGTGCAAAAAGGA...GTCGTCTTTAGCCATTTGTCCTTGTGGAAAGGCTCTCTTGCACTGCTGTGACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS-3UTR GCA 90 bp | GGCAGTCACAGCAGTGCAAGAGAGCCTTTCCACAAGGACAAATGGCTAAAGACGACCAGCTTTTGCTCATaGAAACGGGTGATGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: GSHSSAREPFHKDKWLKTTSFCS*KRVMLM Trigger: CATGAGCATCACCCGTTTGCATGAGCAAAAGCTGGT...CGTCTTTAGCCATTTGTCCTTGTGGAAAGGCTCTCTTGCACTGCTGTGACTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS-3UTR CCA 90 bp | CCACCTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTTGAAGATCAAGCCCATTTAGTACCTTCAAGCTaGACCCTAAACACAGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: PPLYRGEQEGGVLEDQAHLVPSS*TLNTGL Trigger: CAATCCTGTGTTTAGGGTCCAGCTTGAAGGTACTAA...ATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAAAGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| 3UTR CAA 72 bp | CAAGGGTCAAGCCATCTGCAAAGTGCCAACTGTTCTTaGTCAACTCCGGGCTATGCCACTTTCTTCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGSSHLQSANCS*STPGYATFFLF Trigger: AAAAAGGAAGAAAGTGGCATAGCCCGGAGTTGACAAAGAACAGTTGGCACTTTGCAGATGGCTTGACCCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
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| CDS GCA 90 bp | GCCTTCCTCAGGATGCGTGACACCTGGCGGAGGCGCTCCCGCTGCTaGTCCTCCCGCAGCCTCCGGACCCGCTCAGCAGCTTTGCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AFLRMRDTWRRRSRC*SSRSLRTRSAALRS Trigger: GGAGCGCAAAGCTGCTGAGCGGGTCCGGAGGCTGCGGGAGGAGCAGCAGCGGGAGCGCCTCCGCCAGGTGTCACGCATCCTGAGGAAGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000106183.3 |
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| CDS GCA 90 bp | TCCTCCTGGCGGCGCTTGAGGCCCTCACGCCGCCGACTTCGACCCTaGAGCTCGGTCACCAGATCCTCGCTCTCGGCCAAGAGCCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSWRRLRPSRRRLRP*SSVTRSSLSAKSRP Trigger: GGGCCGGCTCTTGGCCGAGAGCGAGGATCTGGTGACCGAGCTGCAGGGTCGAAGTCGGCGGCGTGAGGGCCTCAAGCGCCGCCAGGAGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000106183.3 |
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| CDS GCA 90 bp | TCACCAGATCCTCGCTCTCGGCCAAGAGCCGGCCCTCCTCCGCGCTaGGCTCTGCAGCCGCCTTCCTCAGGATGCGTGACACCTGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPDPRSRPRAGPPPR*ALQPPSSGCVTPGG Trigger: TCCGCCAGGTGTCACGCATCCTGAGGAAGGCGGCTGCAGAGCGCAGCGCGGAGGAGGGCCGGCTCTTGGCCGAGAGCGAGGATCTGGTGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000106183.3 |
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| CDS-3UTR CAA 90 bp | GGTAAGGCAGTGGTGGACTCTCCTGCTGGCCAGGCCTGGGAAGGGCCGGAGCTCACCCGCTCAGCAGCTTaGCGCTCCGAGCGGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GKAVVDSPAGQAWEGPELTRSAA*RSERLR Trigger: TCTGAGCCGCTCGGAGCGCAAAGCTGCTGAGCGGGT...GAGCTCCGGCCCTTCCCAGGCCTGGCCAGCAGGAGAGTCCACCACTGCCTTACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS GCA 90 bp | GCTGGAAGCAGCGTCAGTGACACCAAGCTGCAGGGGACACCAAGCTaGAGGGGAAAGTCTTCAGGGCAGCAGCAGCCCTCGCTCGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGSSVSDTKLQGTPS*RGKSSGQQQPSLDS Trigger: GCTGTCGAGCGAGGGCTGCTGCTGCCCTGAAGACTTTCCCCTGCAGCTTGGTGTCCCCTGCAGCTTGGTGTCACTGACGCTGCTTCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
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| CDS-3UTR CAA 90 bp | CGGGCGGAGCCCCTGAACAAGGGTCAAGCCATCTGCAAAGTGCCAACTGTTCTTAGCTGGGTCCCGCACTaGTGGCAGGTCCGGCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RAEPLNKGQAICKVPTVLSWVPH*WQVRPV Trigger: GACAGGCCGGACCTGCCACAAGTGCGGGACCCAGCT...AAGAACAGTTGGCACTTTGCAGATGGCTTGACCCTTGTTCAGGGGCTCCGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| CDS GCA 90 bp | GCCTCCCAGTTCAGAGGCTGCCCTAATGTCCCCCTCTCCCCAAAGTaGACAATGGTATCCCGAAGCTGGGTCCCGCACTTGTGGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASQFRGCPNVPLSPK*TMVSRSWVPHLWQV Trigger: GACCTGCCACAAGTGCGGGACCCAGCTTCGGGATACCATTGTGCACTTTGGGGAGAGGGGGACATTAGGGCAGCCTCTGAACTGGGAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| CDS-3UTR CAA 90 bp | CTGGAGAGTGAGGTAAGGCAGTGGTGGACTCTCCTGCTGGCCAGGCCTGGGAAGTCGCCAAGGAGAAGATaGGATCCTGCCACCGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LESEVRQWWTLLLARPGKSPRRR*DPATGC Trigger: ACAACCGGTGGCAGGATCCAATCTTCTCCTTGGCGA...CTTCCCAGGCCTGGCCAGCAGGAGAGTCCACCACTGCCTTACCTCACTCTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS TCA 90 bp | AGCTGGGTCCCGCACTTGTGGCAGGTCCGGCCTGTCAGGTGTCGGTaGAGGGCAGTACGCTCAGTCACATCAAACACTCGTACATACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SWVPHLWQVRPVRCR*RAVRSVTSNTRTYS Trigger: AGAGTATGTACGAGTGTTTGATGTGACTGAGCGTACTGCCCTTCACCGACACCTGACAGGCCGGACCTGCCACAAGTGCGGGACCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
||
| CDS-3UTR CAA 90 bp | AGACTTGCTCAGACTGGAGGCTTAGTTAGATTCTCCCTGTGCCGCATACCCAATAGCTGGGTCCCGCACTaGTGGCAGGTCCGGCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RLAQTGGLVRFSLCRIPNSWVPH*WQVRPV Trigger: GACAGGCCGGACCTGCCACAAGTGCGGGACCCAGCT...ATTGGGTATGCGGCACAGGGAGAATCTAACTAAGCCTCCAGTCTGAGCAAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
||
| CDS CCA 90 bp | ACGTGTTGCACCAGCTTTTGCTCATGCAAACGGGTGATGCTCATGTaGGTGAGGGTAGGCTCCGCTTCGCTTAGGTCGGCAGCACTCACA | + |
|
Preference number: 5 (lower is better) Translates to: TCCTSFCSCKRVMLM*VRVGSASLRSAALT Trigger: TGTGAGTGCTGCCGACCTAAGCGAAGCGGAGCCTACCCTCACCCACATGAGCATCACCCGTTTGCATGAGCAAAAGCTGGTGCAACACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
||
| CDS-3UTR CAA 90 bp | CCACCTTTGTACAGGGGTGAACAGGAGGGAGGTGTCCTTGAAGATCAAGCCCATAGGATTGTGTCTGCTTaGCTAGCAGCCTCGGTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PPLYRGEQEGGVLEDQAHRIVSA*LAASVA Trigger: AGCGACCGAGGCTGCTAGCAAAGCAGACACAATCCT...ATGGGCTTGATCTTCAAGGACACCTCCCTCCTGTTCACCCCTGTACAAAGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
||
| CDS GCA 90 bp | GGTTCACGATGTAGAGTTTGGGTCGACGGCTTGGAGGCTTCGTCATaGACCAGAGGCGGGGATATTTCTTTAGTACCTTCAAGCTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: GSRCRVWVDGLEASS*TRGGDISLVPSSWT Trigger: GGTCCAGCTTGAAGGTACTAAAGAAATATCCCCGCCTCTGGTGCATGACGAAGCCTCCAAGCCGTCGACCCAAACTCTACATCGTGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
||
| CDS-3UTR CAA 90 bp | ATAGCGGGGCAGTCACAGCAGTGCAAGAGAGCCTTTCCACAAGGACAAATGGCTGTGTTGCACCAGCTTTaGCTCATGCAAACGGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: IAGQSQQCKRAFPQGQMAVLHQL*LMQTGD Trigger: ATCACCCGTTTGCATGAGCAAAAGCTGGTGCAACAC...AGCCATTTGTCCTTGTGGAAAGGCTCTCTTGCACTGCTGTGACTGCCCCGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
||
| CDS-3UTR CAA 90 bp | GGCAGTCACAGCAGTGCAAGAGAGCCTTTCCACAAGGACAAATGGCTAAAGACGCCACTTTCTTCCTTTTaGCACGCTTGGCACAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSHSSAREPFHKDKWLKTPLSSF*HAWHNP Trigger: GGGGTTGTGCCAAGCGTGCAAAAAGGAAGAAAGTGG...CGTCTTTAGCCATTTGTCCTTGTGGAAAGGCTCTCTTGCACTGCTGTGACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
||
| CDS-3UTR CAA 90 bp | GCGGGGCAGTCACAGCAGTGCAAGAGAGCCTTTCCACAAGGACAAATGGCTAAATTCATTCATGAGGAGTaGCATGACATCATCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: AGQSQQCKRAFPQGQMAKFIHEE*HDIITL Trigger: AAGTGTGATGATGTCATGCAACTCCTCATGAATGAA...TTTAGCCATTTGTCCTTGTGGAAAGGCTCTCTTGCACTGCTGTGACTGCCCCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
||
| CDS-3UTR CAA 90 bp | CTGAACAAGGGTCAAGCCATCTGCAAAGTGCCAACTGTTCTTTGTCAACTCCGGTTCATTCATGAGGAGTaGCATGACATCATCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: LNKGQAICKVPTVLCQLRFIHEE*HDIITL Trigger: AAGTGTGATGATGTCATGCAACTCCTCATGAATGAA...CCGGAGTTGACAAAGAACAGTTGGCACTTTGCAGATGGCTTGACCCTTGTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
||
| CDS GCA 72 bp | GCTCCTCCCGCAGCCTCCGGACCCGCTCAGCAGCTTTaGGCTCCGAGCGGCTCAGACCGCCACCGGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: APPAASGPAQQL*APSGSDRHRLP Trigger: TGGCAGCCGGTGGCGGTCTGAGCCGCTCGGAGCGCAAAGCTGCTGAGCGGGTCCGGAGGCTGCGGGAGGAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000106183.3 |
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| CDS CAA 72 bp | TGCTCCTCCCGCAGCCTCCGGACCCGCTCAGCAGCTTaGCGCTCCGAGCGGCTCAGACCGCCACCGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: CSSRSLRTRSAA*RSERLRPPPAA Trigger: GGCAGCCGGTGGCGGTCTGAGCCGCTCGGAGCGCAAAGCTGCTGAGCGGGTCCGGAGGCTGCGGGAGGAGCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000106183.3 |
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| CDS GCA 72 bp | CTCAGGATGCGTGACACCTGGCGGAGGCGCTCCCGCTaGTGCTCCTCCCGCAGCCTCCGGACCCGCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LRMRDTWRRRSR*CSSRSLRTRSA Trigger: TGCTGAGCGGGTCCGGAGGCTGCGGGAGGAGCAGCAGCGGGAGCGCCTCCGCCAGGTGTCACGCATCCTGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000106183.3 |
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| CDS TCA 72 bp | CCTCCGGGTCATCACACACCTCCTCCTGGCGGCGCTTaGGGCCCTCACGCCGCCGACTTCGACCCTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PPGHHTPPPGGA*GPHAADFDPAA Trigger: AGCTGCAGGGTCGAAGTCGGCGGCGTGAGGGCCTCAAGCGCCGCCAGGAGGAGGTGTGTGATGACCCGGAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000106183.3 |
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| CDS GCA 72 bp | CGGCGCTTGAGGCCCTCACGCCGCCGACTTCGACCCTaGAGCTCGGTCACCAGATCCTCGCTCTCGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: RRLRPSRRRLRP*SSVTRSSLSAK Trigger: CTTGGCCGAGAGCGAGGATCTGGTGACCGAGCTGCAGGGTCGAAGTCGGCGGCGTGAGGGCCTCAAGCGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000106183.3 |
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| CDS CAA 72 bp | TCCTCCGGGTCATCACACACCTCCTCCTGGCGGCGCTaGAGGCCCTCACGCCGCCGACTTCGACCCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSGSSHTSSWRR*RPSRRRLRPCS Trigger: GCTGCAGGGTCGAAGTCGGCGGCGTGAGGGCCTCAAGCGCCGCCAGGAGGAGGTGTGTGATGACCCGGAGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000106183.3 |
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| CDS CCA 72 bp | CCCCTCTCCCCAAAGTGCACAATGGTATCCCGAAGCTaGGTCCCGCACTTGTGGCAGGTCCGGCCTGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: PLSPKCTMVSRS*VPHLWQVRPVR Trigger: CCTGACAGGCCGGACCTGCCACAAGTGCGGGACCCAGCTTCGGGATACCATTGTGCACTTTGGGGAGAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| CDS CCA 72 bp | GCTGCCCTAATGTCCCCCTCTCCCCAAAGTGCACAATaGTATCCCGAAGCTGGGTCCCGCACTTGTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: AALMSPSPQSAQ*YPEAGSRTCGR Trigger: CCTGCCACAAGTGCGGGACCCAGCTTCGGGATACCATTGTGCACTTTGGGGAGAGGGGGACATTAGGGCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| CDS TCA 72 bp | CCGCACTTGTGGCAGGTCCGGCCTGTCAGGTGTCGGTaGAGGGCAGTACGCTCAGTCACATCAAACACTCGT | + |
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Preference number: 6 (lower is better) Translates to: PHLWQVRPVRCR*RAVRSVTSNTR Trigger: ACGAGTGTTTGATGTGACTGAGCGTACTGCCCTTCACCGACACCTGACAGGCCGGACCTGCCACAAGTGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| CDS GCA 72 bp | GGGCTTTGGCTGGAAGCAGCGTCAGTGACACCAAGCTaGAGGGGACACCAAGCTGCAGGGGAAAGTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: GLWLEAASVTPS*RGHQAAGESLQ Trigger: CTGAAGACTTTCCCCTGCAGCTTGGTGTCCCCTGCAGCTTGGTGTCACTGACGCTGCTTCCAGCCAAAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
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| CDS TCA 72 bp | GGCAACCCACTCCGCAGGTGGAGCCCATCACAGTTCTaGGACACCACGTGTTGCACCAGCTTTTGCTCATGC | + |
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Preference number: 6 (lower is better) Translates to: GNPLRRWSPSQF*DTTCCTSFCSC Trigger: GCATGAGCAAAAGCTGGTGCAACACGTGGTGTCTCAGAACTGTGATGGGCTCCACCTGCGGAGTGGGTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS TCA 72 bp | TGTCTTAATCTGGGCTTTGGCTGGAAGCAGCGTCAGTaGCACCAAGCTGCAGGGGACACCAAGCTGCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: CLNLGFGWKQRQ*HQAAGDTKLQG Trigger: CCCCTGCAGCTTGGTGTCCCCTGCAGCTTGGTGTCACTGACGCTGCTTCCAGCCAAAGCCCAGATTAAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146809.2 |
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| CDS CCA 72 bp | CCTTCGGGGTCCACTGCAGGTTCACGATGTAGAGTTTaGGTCGACGGCTTGGAGGCTTCGTCATGCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: PSGSTAGSRCRV*VDGLEASSCTR Trigger: TCTGGTGCATGACGAAGCCTCCAAGCCGTCGACCCAAACTCTACATCGTGAACCTGCAGTGGACCCCGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| CDS CCA 72 bp | ACCAGCTTTTGCTCATGCAAACGGGTGATGCTCATGTaGGTGAGGGTAGGCTCCGCTTCGCTTAGGTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: TSFCSCKRVMLM*VRVGSASLRSA Trigger: TGCCGACCTAAGCGAAGCGGAGCCTACCCTCACCCACATGAGCATCACCCGTTTGCATGAGCAAAAGCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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| CDS CCA 72 bp | CTGCAGGTTCACGATGTAGAGTTTGGGTCGACGGCTTaGAGGCTTCGTCATGCACCAGAGGCGGGGATATTT | + |
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Preference number: 6 (lower is better) Translates to: LQVHDVEFGSTA*RLRHAPEAGIF Trigger: AAATATCCCCGCCTCTGGTGCATGACGAAGCCTCCAAGCCGTCGACCCAAACTCTACATCGTGAACCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| CDS CAA 72 bp | ACTGCAGGTTCACGATGTAGAGTTTGGGTCGACGGCTaGGAGGCTTCGTCATGCACCAGAGGCGGGGATATT | + |
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Preference number: 6 (lower is better) Translates to: TAGSRCRVWVDG*EASSCTRGGDI Trigger: AATATCCCCGCCTCTGGTGCATGACGAAGCCTCCAAGCCGTCGACCCAAACTCTACATCGTGAACCTGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| CDS CAA 90 bp | TTTAGTACCTTCAAGCTGGACCCTAAACACAGGATTGTGTCTGCTTaGCTAGCAGCCTCGGTCGCTGCCTCCCAGTTCAGAGGCTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: FSTFKLDPKHRIVSA*LAASVAASQFRGCP Trigger: AGGGCAGCCTCTGAACTGGGAGGCAGCGACCGAGGCTGCTAGCAAAGCAGACACAATCCTGTGTTTAGGGTCCAGCTTGAAGGTACTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| CDS CAA 72 bp | TTCAAGCTGGACCCTAAACACAGGATTGTGTCTGCTTaGCTAGCAGCCTCGGTCGCTGCCTCCCAGTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: FKLDPKHRIVSA*LAASVAASQFR Trigger: TCTGAACTGGGAGGCAGCGACCGAGGCTGCTAGCAAAGCAGACACAATCCTGTGTTTAGGGTCCAGCTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080202.12 ENSMUST00000146809.2 |
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| CDS CCA 72 bp | AAGCAGTGTCCATACTCCATTAGGACCCCGATAATCTaGGATAGAAGCTGCTGTGCTGATTCCAGCGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: KQCPYSIRTPII*DRSCCADSSAR Trigger: ACGGGCGCTGGAATCAGCACAGCAGCTTCTATCCCAGATTATCGGGGTCCTAATGGAGTATGGACACTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080202.12 |
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