Pregenerated sensors for SIRT6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034748Ensembl transcript IDs: ENSMUST00000042923.9, ENSMUST00000119324.8, ENSMUST00000143424.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATGGGTaGCTGGTGGGCCCTTGGTGGCTCTGTGTCAGGGCCAGGGGATGG | + |
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Preference number: 1 (lower is better) Translates to: CIGSFWEPGALSTDG*LVGPWWLCVRARGW Trigger: CCATCCCCTGGCCCTGACACAGAGCCACCAAGGGCCCACCAGGCACCCATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| 3UTR GCA 90 bp | TGGATCCCTGGGACACGGCCTCTTCCACATGTGTGGGATTCCCCATaGCCTGAGATTCCCTGGAAGGACCTGGACAAGGGACACAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: WIPGTRPLPHVWDSP*PEIPWKDLDKGHSE Trigger: CTCACTGTGTCCCTTGTCCAGGTCCTTCCAGGGAATCTCAGGGCATGGGGAATCCCACACATGTGGAAGAGGCCGTGTCCCAGGGATCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042923.9 |
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| 3UTR-3UTR GCA 90 bp | AGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATGGGTGCCTGGTGGGCCCTTGGCACCAGGGTGAGATATaGAAACCTGGGCTCAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: SFWEPGALSTDGCLVGPWHQGEI*KPGLSP Trigger: GGGACTGAGCCCAGGTTTGCATATCTCACCCTGGTG...CCAAGGGCCCACCAGGCACCCATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042923.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGAGTCACGAGCGGGTGTGATTGGTAGAGAGGCACGTGGATCCCTGGGACACTGGACATGGTGTACCTaGCCGCTGTCCCTACTACAG | + |
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Preference number: 2 (lower is better) Translates to: PESRAGVIGREARGSLGHWTWCT*PLSLLQ Trigger: CTGTAGTAGGGACAGCGGGCAGGTACACCATGTCCA...GTGTCCCAGGGATCCACGTGCCTCTCTACCAATCACACCCGCTCGTGACTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042923.9 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTATTTATTGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATCTGGTGGGCCCTTGGTaGCTCTGTGTCAGGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: FCIYCIGSFWEPGALSTDLVGPW*LCVRAR Trigger: CCTGGCCCTGACACAGAGCCACCAAGGGCCCACCAG...ATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCAATAAATACAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| 3UTR CAA 90 bp | CCTGAGATTCCCTGGAAGGACCTGGACAAGGGACACAGTGAGACTTaGAAGAAAGGAGCTGTGTTGGACATGGTGTACCTGCCCGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: PEIPWKDLDKGHSET*KKGAVLDMVYLPAV Trigger: GACAGCGGGCAGGTACACCATGTCCAACACAGCTCCTTTCTTCAAAGTCTCACTGTGTCCCTTGTCCAGGTCCTTCCAGGGAATCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042923.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGATTTTGTATTTATTGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCATGCAGGGGGCAGCAATaGTGTGTGGAGTGTGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: RDFVFIALGASGSLGPLACRGQQ*CVECVR Trigger: TCTCACACACTCCACACACCATTGCTGCCCCCTGCA...TGCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCAATAAATACAAAATCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| 3UTR CCA 72 bp | TCTGGGAGCCTGGGGCCCTTAGCACAGATGGGTGCCTaGTGGGCCCTTGGTGGCTCTGTGTCAGGGCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: SGSLGPLAQMGA*WALGGSVSGPG Trigger: CCCTGGCCCTGACACAGAGCCACCAAGGGCCCACCAGGCACCCATCTGTGCTAAGGGCCCCAGGCTCCCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| 3UTR TCA 72 bp | GGTGTACCTGCCCGCTGTCCCTACTACAGTAGAGGCTaGGGCAGGCAGGCTAGTTCCAGGCCAGCCTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: GVPARCPYYSRG*GRQASSRPAWA Trigger: AGCCCAGGCTGGCCTGGAACTAGCCTGCCTGCCTCAGCCTCTACTGTAGTAGGGACAGCGGGCAGGTACACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042923.9 |
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| 3UTR TCA 72 bp | TGCTGCTCCGGGCACATCCTGAGTCACGAGCGGGTGTaGTTGGTAGAGAGGCACGTGGATCCCTGGGACACG | + |
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Preference number: 3 (lower is better) Translates to: CCSGHILSHERV*LVERHVDPWDT Trigger: CGTGTCCCAGGGATCCACGTGCCTCTCTACCAATCACACCCGCTCGTGACTCAGGATGTGCCCGGAGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| 3UTR TCA 72 bp | ATGCGTGCAGGGGGCAGCAATGGTGTGTGGAGTGTGTaGGACTGCTGCTCCGGGCACATCCTGAGTCACGAG | + |
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Preference number: 3 (lower is better) Translates to: MRAGGSNGVWSV*DCCSGHILSHE Trigger: CTCGTGACTCAGGATGTGCCCGGAGCAGCAGTCTCACACACTCCACACACCATTGCTGCCCCCTGCACGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| 3UTR CCA 72 bp | ACGTGGATCCCTGGGACACGGCCTCTTCCACATGTGTaGGATTCCCCATGCCCTGAGATTCCCTGGAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: TWIPGTRPLPHV*DSPCPEIPWKD Trigger: GTCCTTCCAGGGAATCTCAGGGCATGGGGAATCCCACACATGTGGAAGAGGCCGTGTCCCAGGGATCCACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| 3UTR-3UTR CAA 90 bp | TGGAAGGGATTTTGTATTTATTGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTGTGCCTGGTGGGCCCTaGGTGGCTCTGTGTCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: WKGFCIYCIGSFWEPGALVPGGP*VALCQG Trigger: GCCCTGACACAGAGCCACCAAGGGCCCACCAGGCAC...AAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCAATAAATACAAAATCCCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| 3UTR TCA 72 bp | ACGGCCTCTTCCACATGTGTGGGATTCCCCATGCCCTaGGATTCCCTGGAAGGACCTGGACAAGGGACACAG | + |
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Preference number: 3 (lower is better) Translates to: TASSTCVGFPMP*DSLEGPGQGTQ Trigger: CTGTGTCCCTTGTCCAGGTCCTTCCAGGGAATCTCAGGGCATGGGGAATCCCACACATGTGGAAGAGGCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042923.9 |
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| 3UTR-3UTR CAA 90 bp | TGGAAGGGATTTTGTATTTATTGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTGGACACAGTGAGACTTaGAAGAAAGGAGCTGTGTTG | + |
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Preference number: 3 (lower is better) Translates to: WKGFCIYCIGSFWEPGALGHSET*KKGAVL Trigger: CAACACAGCTCCTTTCTTCAAAGTCTCACTGTGTCC...AAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCAATAAATACAAAATCCCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042923.9 |
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| CDS-3UTR CCA 90 bp | ATTGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATGGGTGCCTGGGGGGCAGGTTCCCACTaGGGCGGATCTGCAGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: IALGASGSLGPLAQMGAWGAGSH*GGSAAR Trigger: CCTCGCTGCAGATCCGCCCCAGTGGGAACCTGCCCC...CCAGGCACCCATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCAAT 64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR GCA 90 bp | GCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATGGGTGCCTGGTGGGGTGACAGACAGGTCTaGGGTCCTGCTGGCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: ALGASGSLGPLAQMGAWWGDRQV*GPAGLI Trigger: GATGAGGCCAGCAGGACCGCAGACCTGTCTGTCACC...CCACCAGGCACCCATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CCA 90 bp | TGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATGGGTGCCTGGTGAGGCCCGAAGTCCCCTaGTCTTGGCCACGGTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: CIGSFWEPGALSTDGCLVRPEVP*SWPRCR Trigger: TCTGCACCGTGGCCAAGACCAGGGGACTTCGGGCCT...CACCAGGCACCCATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CCA 90 bp | GCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATGGGTGCCTGGTGGAGCCTTGAGTGCTACTaGGCGAGGCAGAGGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ALGASGSLGPLAQMGAWWSLECY*ARQRWQ Trigger: CTGCCACCTCTGCCTCGCCCAGTAGCACTCAAGGCT...CCACCAGGCACCCATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR GCA 90 bp | CGAGCGGGTGTGATTGGTAGAGAGGCACGTGGATCCCTGGGACACGGCCTCTTCACAGGTCTGCGGTCCTaGTGGCCTCATCAGCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: RAGVIGREARGSLGHGLFTGLRS*WPHQRA Trigger: TGCTCGCTGATGAGGCCAGCAGGACCGCAGACCTGT...GAAGAGGCCGTGTCCCAGGGATCCACGTGCCTCTCTACCAATCACACCCGCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CCA 90 bp | TGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATGGGTGCCTGGTGAGCCCGTCTACGTTCTaGCTGACCAGGAAGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: CIGSFWEPGALSTDGCLVSPSTF*LTRKLR Trigger: CCTCAGCTTCCTGGTCAGCCAGAACGTAGACGGGCT...CACCAGGCACCCATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CCA 90 bp | GTGATTGGTAGAGAGGCACGTGGATCCCTGGGACACGGCCTCTTCCACATGTGTGAAGTCCCCTGGTCTTaGCCACGGTGCAGAGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: VIGREARGSLGHGLFHMCEVPWS*PRCRAG Trigger: GCCGGCTCTGCACCGTGGCCAAGACCAGGGGACTTC...ACACATGTGGAAGAGGCCGTGTCCCAGGGATCCACGTGCCTCTCTACCAATCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CCA 90 bp | GGTAGAGAGGCACGTGGATCCCTGGGACACGGCCTCTTCCACATGTGTGGGATTAGGCCCGAAGTCCCCTaGTCTTGGCCACGGTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GREARGSLGHGLFHMCGIRPEVP*SWPRCR Trigger: TCTGCACCGTGGCCAAGACCAGGGGACTTCGGGCCT...AATCCCACACATGTGGAAGAGGCCGTGTCCCAGGGATCCACGTGCCTCTCTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CCA 90 bp | TCACGAGCGGGTGTGATTGGTAGAGAGGCACGTGGATCCCTGGGACACGGCCTCCCTCCCAGTCCAGAATaGTGTCTCTCAGCTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SRAGVIGREARGSLGHGLPPSPE*CLSAPL Trigger: GAGGGGAGCTGAGAGACACCATTCTGGACTGGGAGG...GAGGCCGTGTCCCAGGGATCCACGTGCCTCTCTACCAATCACACCCGCTCGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR TCA 90 bp | GCACATCCTGAGTCACGAGCGGGTGTGATTGGTAGAGAGGCACGTGGATCCCTGCCCATGCGTTCTAGCTaGACCAGGGCCATGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: AHPESRAGVIGREARGSLPMRSS*TRAMWV Trigger: GACCCACATGGCCCTGGTTCAGCTAGAACGCATGGG...CAGGGATCCACGTGCCTCTCTACCAATCACACCCGCTCGTGACTCAGGATGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR TCA 90 bp | TATTGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATGGGTGCCTGCCCATGCGTTCTAGCTaGACCAGGGCCATGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: YCIGSFWEPGALSTDGCLPMRSS*TRAMWV Trigger: GACCCACATGGCCCTGGTTCAGCTAGAACGCATGGG...CAGGCACCCATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCAATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR GCA 90 bp | GGTAGAGAGGCACGTGGATCCCTGGGACACGGCCTCTTCCACATGTGTGGGATTACAGGTCTGCGGTCCTaGTGGCCTCATCAGCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GREARGSLGHGLFHMCGITGLRS*WPHQRA Trigger: TGCTCGCTGATGAGGCCAGCAGGACCGCAGACCTGT...AATCCCACACATGTGGAAGAGGCCGTGTCCCAGGGATCCACGTGCCTCTCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR GCA 90 bp | GCACATCCTGAGTCACGAGCGGGTGTGATTGGTAGAGAGGCACGTGGATCCCTGGGTGACAGACAGGTCTaGGGTCCTGCTGGCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: AHPESRAGVIGREARGSLGDRQV*GPAGLI Trigger: GATGAGGCCAGCAGGACCGCAGACCTGTCTGTCACC...CAGGGATCCACGTGCCTCTCTACCAATCACACCCGCTCGTGACTCAGGATGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CCA 90 bp | CCTGAGTCACGAGCGGGTGTGATTGGTAGAGAGGCACGTGGATCCCTGGGACACTTCCAGCTCCTCTGGTaGGTCGAAGATCTCGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PESRAGVIGREARGSLGHFQLLW*VEDLGQ Trigger: CTGCCCGAGATCTTCGACCCACCAGAGGAGCTGGAA...GTGTCCCAGGGATCCACGTGCCTCTCTACCAATCACACCCGCTCGTGACTCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042923.9 |
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| CDS-3UTR CCA 90 bp | GGTAGAGAGGCACGTGGATCCCTGGGACACGGCCTCTTCCACATGTGTGGGATTCCTCCCAGTCCAGAATaGTGTCTCTCAGCTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: GREARGSLGHGLFHMCGIPPSPE*CLSAPL Trigger: GAGGGGAGCTGAGAGACACCATTCTGGACTGGGAGG...AATCCCACACATGTGGAAGAGGCCGTGTCCCAGGGATCCACGTGCCTCTCTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CCA 90 bp | TATTGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATGGGTGCCTGGAGCATTCTCGAAGGTaGTGTCAAACTTGGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: YCIGSFWEPGALSTDGCLEHSRR*CQTWGP Trigger: TGGCCCCCAAGTTTGACACCACCTTCGAGAATGCTC...CAGGCACCCATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCAATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CCA 90 bp | TTTTGTATTTATTGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATGGGGCAGGTTCCCACTaGGGCGGATCTGCAGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: FCIYCIGSFWEPGALSTDGAGSH*GGSAAR Trigger: CCTCGCTGCAGATCCGCCCCAGTGGGAACCTGCCCC...ATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCAATAAATACAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CCA 90 bp | GCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATGGGTGCCTGGTGGACTGCGTCTTACACTTaGGACATTCCTCTACAAACA | + |
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Preference number: 4 (lower is better) Translates to: ALGASGSLGPLAQMGAWWTASYT*DIPLQT Trigger: TGTTTGTAGAGGAATGTCCCAAGTGTAAGACGCAGT...CCACCAGGCACCCATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CCA 90 bp | AAGGGATTTTGTATTTATTGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCGCGTTCCAGCTCCTCTaGTGGGTCGAAGATCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: KGFCIYCIGSFWEPGALSAFQLL*WVEDLG Trigger: CCCGAGATCTTCGACCCACCAGAGGAGCTGGAACGC...GCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCAATAAATACAAAATCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042923.9 |
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| CDS-3UTR CCA 90 bp | AAGGGATTTTGTATTTATTGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCAGCCTTGAGTGCTACTaGGCGAGGCAGAGGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KGFCIYCIGSFWEPGALSSLECY*ARQRWQ Trigger: CTGCCACCTCTGCCTCGCCCAGTAGCACTCAAGGCT...GCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCAATAAATACAAAATCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CCA 90 bp | AATGGAAGGGATTTTGTATTTATTGCATTGGGAGCTTCTGGGAGCCTGGGGCCCAGCCCGTCTACGTTCTaGCTGACCAGGAAGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: NGRDFVFIALGASGSLGPSPSTF*LTRKLR Trigger: CCTCAGCTTCCTGGTCAGCCAGAACGTAGACGGGCT...GGGCCCCAGGCTCCCAGAAGCTCCCAATGCAATAAATACAAAATCCCTTCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CCA 90 bp | AAAGAATGGAAGGGATTTTGTATTTATTGCATTGGGAGCTTCTGGGAGCCTGGGGAAGTCCCCTGGTCTTaGCCACGGTGCAGAGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: KEWKGFCIYCIGSFWEPGEVPWS*PRCRAG Trigger: GCCGGCTCTGCACCGTGGCCAAGACCAGGGGACTTC...CCCAGGCTCCCAGAAGCTCCCAATGCAATAAATACAAAATCCCTTCCATTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| 3UTR CAA 72 bp | CCCTGGAAGGACCTGGACAAGGGACACAGTGAGACTTaGAAGAAAGGAGCTGTGTTGGACATGGTGTACCTG | + |
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Preference number: 4 (lower is better) Translates to: PWKDLDKGHSET*KKGAVLDMVYL Trigger: CAGGTACACCATGTCCAACACAGCTCCTTTCTTCAAAGTCTCACTGTGTCCCTTGTCCAGGTCCTTCCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042923.9 |
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| CDS-3UTR CCA 90 bp | ATTCCCTGGAAGGACCTGGACAAGGGACACAGTGAGACTTTGAAGAAAGGAGCTTGTGGAAAACCACGCTaGAGGACTGCCACATTAGCC | + |
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Preference number: 4 (lower is better) Translates to: IPWKDLDKGHSETLKKGACGKPR*RTATLA Trigger: GGCTAATGTGGCAGTCCTCCAGCGTGGTTTTCCACA...AGCTCCTTTCTTCAAAGTCTCACTGTGTCCCTTGTCCAGGTCCTTCCAGGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042923.9 |
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| CDS-3UTR CCA 90 bp | AATGGAAGGGATTTTGTATTTATTGCATTGGGAGCTTCTGGGAGCCTGGGGCCCGAGCATTCTCGAAGGTaGTGTCAAACTTGGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: NGRDFVFIALGASGSLGPEHSRR*CQTWGP Trigger: TGGCCCCCAAGTTTGACACCACCTTCGAGAATGCTC...GGGCCCCAGGCTCCCAGAAGCTCCCAATGCAATAAATACAAAATCCCTTCCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CCA 90 bp | ATGGAAGGGATTTTGTATTTATTGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTACTGCGTCTTACACTTaGGACATTCCTCTACAAACA | + |
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Preference number: 4 (lower is better) Translates to: MEGILYLLHWELLGAWGPTASYT*DIPLQT Trigger: TGTTTGTAGAGGAATGTCCCAAGTGTAAGACGCAGT...AGGGCCCCAGGCTCCCAGAAGCTCCCAATGCAATAAATACAAAATCCCTTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CAA 90 bp | GGAGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATGGGTGCCTGGTGGGCCCTTCGAAGTCCCCTGGTCTaGGCCACGGTGCAGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: GASGSLGPLAQMGAWWALRSPLV*ATVQSR Trigger: CCGGCTCTGCACCGTGGCCAAGACCAGGGGACTTCG...AAGGGCCCACCAGGCACCCATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS GCA 90 bp | CCACGCTGGAGGACTGCCACATTAGCCGGGCCAGCTCCCACACCTTaGGTTCCAGCTCCTCTGGTGGGTCGAAGATCTCGGGCAGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: PRWRTATLAGPAPTP*VPAPLVGRRSRAAR Trigger: GCGGGCTGCCCGAGATCTTCGACCCACCAGAGGAGCTGGAACGCAAGGTGTGGGAGCTGGCCCGGCTAATGTGGCAGTCCTCCAGCGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042923.9 |
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| CDS TCA 90 bp | GGGGCAGGTTCCCACTGGGGCGGATCTGCAGCGAGGTACCCAGGGTaGCAGACAGGTCTGCGGTCCTGCTGGCCTCATCAGCGAGCATCA | + |
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Preference number: 5 (lower is better) Translates to: GAGSHWGGSAARYPG*QTGLRSCWPHQRAS Trigger: TGATGCTCGCTGATGAGGCCAGCAGGACCGCAGACCTGTCTGTCACCCTGGGTACCTCGCTGCAGATCCGCCCCAGTGGGAACCTGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS CCA 90 bp | TGTGGGTCTTCGAGGGCCGAGCATTCTCGAAGGTGGTGTCAAACTTaGGGGCCAGGCCGCGTTCCTCCATGGTCCACACGCCATGGGGGC | + |
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Preference number: 5 (lower is better) Translates to: CGSSRAEHSRRWCQT*GPGRVPPWSTRHGG Trigger: GCCCCCATGGCGTGTGGACCATGGAGGAACGCGGCCTGGCCCCCAAGTTTGACACCACCTTCGAGAATGCTCGGCCCTCGAAGACCCACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 ENSMUST00000143424.2 |
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| CDS-3UTR CAA 90 bp | TGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATGGGTGCCTGGTGTGCAGCTCTGCCAGCTaGTCCCTGGGGAAGCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: CIGSFWEPGALSTDGCLVCSSAS*SLGKPE Trigger: CTCGGGCTTCCCCAGGGACAAGCTGGCAGAGCTGCA...CACCAGGCACCCATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CAA 90 bp | CATCCTGAGTCACGAGCGGGTGTGATTGGTAGAGAGGCACGTGGATCCCTGGGAAGCCGGCCTGTGGCCTaGAGGCCCATGGTGCCCACA | + |
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Preference number: 5 (lower is better) Translates to: HPESRAGVIGREARGSLGSRPVA*RPMVPT Trigger: TGTGGGCACCATGGGCCTCAAGGCCACAGGCCGGCT...TCCCAGGGATCCACGTGCCTCTCTACCAATCACACCCGCTCGTGACTCAGGATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CAA 90 bp | GGTAGAGAGGCACGTGGATCCCTGGGACACGGCCTCTTCCACATGTGTGGGATTCGAAGTCCCCTGGTCTaGGCCACGGTGCAGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: GREARGSLGHGLFHMCGIRSPLV*ATVQSR Trigger: CCGGCTCTGCACCGTGGCCAAGACCAGGGGACTTCG...AATCCCACACATGTGGAAGAGGCCGTGTCCCAGGGATCCACGTGCCTCTCTACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS CCA 90 bp | GAACCAGGGCCATGTGGGTCTTCGAGGGCCGAGCATTCTCGAAGGTaGTGTCAAACTTGGGGGCCAGGCCGCGTTCCTCCATGGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: EPGPCGSSRAEHSRR*CQTWGPGRVPPWST Trigger: TGTGGACCATGGAGGAACGCGGCCTGGCCCCCAAGTTTGACACCACCTTCGAGAATGCTCGGCCCTCGAAGACCCACATGGCCCTGGTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 ENSMUST00000143424.2 |
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| CDS-3UTR CAA 90 bp | ATTGGTAGAGAGGCACGTGGATCCCTGGGACACGGCCTCTTCCACATGTGTGGGTGCAGCTCTGCCAGCTaGTCCCTGGGGAAGCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: IGREARGSLGHGLFHMCGCSSAS*SLGKPE Trigger: CTCGGGCTTCCCCAGGGACAAGCTGGCAGAGCTGCA...CCCACACATGTGGAAGAGGCCGTGTCCCAGGGATCCACGTGCCTCTCTACCAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS TCA 90 bp | CGCAGGGTCCATCCCAGGCTGGAATCTCCAGCCCCAGATGCTTCATaGGTCTGCACATCACCTCATCCACGTAGCCGTGGATGCGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: RRVHPRLESPAPDAS*VCTSPHPRSRGCAG Trigger: ACCTGCGCATCCACGGCTACGTGGATGAGGTGATGTGCAGACTCATGAAGCATCTGGGGCTGGAGATTCCAGCCTGGGATGGACCCTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS GCA 90 bp | GTTCCAGCTCCTCTGGTGGGTCGAAGATCTCGGGCAGCCCGCACTTaGCCTTATCCGCGTAAGGCGACAACCCTGCTGCATAATTCACCG | + |
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Preference number: 5 (lower is better) Translates to: VPAPLVGRRSRAART*PYPRKATTLLHNSP Trigger: CGGTGAATTATGCAGCAGGGTTGTCGCCTTACGCGGATAAGGGCAAGTGCGGGCTGCCCGAGATCTTCGACCCACCAGAGGAGCTGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042923.9 |
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| CDS-3UTR CAA 90 bp | GTGATTGGTAGAGAGGCACGTGGATCCCTGGGACACGGCCTCTTCCACATGTGTAAGGTGGTGTCAAACTaGGGGGCCAGGCCGCGTTCC | + |
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Preference number: 5 (lower is better) Translates to: VIGREARGSLGHGLFHMCKVVSN*GARPRS Trigger: GGAACGCGGCCTGGCCCCCAAGTTTGACACCACCTT...ACACATGTGGAAGAGGCCGTGTCCCAGGGATCCACGTGCCTCTCTACCAATCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS TCA 90 bp | ACGTTCTGGCTGACCAGGAAGCTGAGGAAGCCCATGCGTTCTAGCTaGACCAGGGCCATGTGGGTCTTCGAGGGCCGAGCATTCTCGAAG | + |
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Preference number: 5 (lower is better) Translates to: TFWLTRKLRKPMRSS*TRAMWVFEGRAFSK Trigger: CTTCGAGAATGCTCGGCCCTCGAAGACCCACATGGCCCTGGTTCAGCTAGAACGCATGGGCTTCCTCAGCTTCCTGGTCAGCCAGAACGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CAA 90 bp | GGAGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATGGGTGCCTGGTGGGCCCTTTACTGCGTCTTACACTaGGGACATTCCTCTACAAAC | + |
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Preference number: 5 (lower is better) Translates to: GASGSLGPLAQMGAWWALYCVLH*GHSSTN Trigger: GTTTGTAGAGGAATGTCCCAAGTGTAAGACGCAGTA...AAGGGCCCACCAGGCACCCATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CAA 90 bp | AATGGAAGGGATTTTGTATTTATTGCATTGGGAGCTTCTGGGAGCCTGGGGCCCAGCCGGCCTGTGGCCTaGAGGCCCATGGTGCCCACA | + |
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Preference number: 5 (lower is better) Translates to: NGRDFVFIALGASGSLGPSRPVA*RPMVPT Trigger: TGTGGGCACCATGGGCCTCAAGGCCACAGGCCGGCT...GGGCCCCAGGCTCCCAGAAGCTCCCAATGCAATAAATACAAAATCCCTTCCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS GCA 90 bp | TACTGCGTCTTACACTTGGGACATTCCTCTACAAACATGTTTCCGTaGAGCTCTGCCAGCTTGTCCCTGGGGAAGCCCGAGCGCACGTGC | + |
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Preference number: 5 (lower is better) Translates to: YCVLHLGHSSTNMFP*SSASLSLGKPERTC Trigger: GCACGTGCGCTCGGGCTTCCCCAGGGACAAGCTGGCAGAGCTGCACGGAAACATGTTTGTAGAGGAATGTCCCAAGTGTAAGACGCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CAA 90 bp | TGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATGGGTGCCTGGTGTGGAGTATAGGGCTGTaGGGCTTGGACTTATACGAA | + |
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Preference number: 5 (lower is better) Translates to: CIGSFWEPGALSTDGCLVWSIGL*GLDLYE Trigger: TTCGTATAAGTCCAAGCCCAACAGCCCTATACTCCA...CACCAGGCACCCATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CAA 90 bp | GGAGATGCGTGCAGGGGGCAGCAATGGTGTGTGGAGTGTGTGAGACTGCTGCTCGTCATGTTTTGTGGGTaGCAGGTTGACAATGACCAG | + |
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Preference number: 5 (lower is better) Translates to: GDACRGQQWCVECVRLLLVMFCG*QVDNDQ Trigger: CTGGTCATTGTCAACCTGCAACCCACAAAACATGAC...GAGCAGCAGTCTCACACACTCCACACACCATTGCTGCCCCCTGCACGCATCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CAA 90 bp | AAAGAATGGAAGGGATTTTGTATTTATTGCATTGGGAGCTTCTGGGAGCCTGGGAAGGTGGTGTCAAACTaGGGGGCCAGGCCGCGTTCC | + |
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Preference number: 5 (lower is better) Translates to: KEWKGFCIYCIGSFWEPGKVVSN*GARPRS Trigger: GGAACGCGGCCTGGCCCCCAAGTTTGACACCACCTT...CCCAGGCTCCCAGAAGCTCCCAATGCAATAAATACAAAATCCCTTCCATTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CAA 90 bp | TGGAAGGGATTTTGTATTTATTGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTGTCATGTTTTGTGGGTaGCAGGTTGACAATGACCAG | + |
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Preference number: 5 (lower is better) Translates to: WKGFCIYCIGSFWEPGALVMFCG*QVDNDQ Trigger: CTGGTCATTGTCAACCTGCAACCCACAAAACATGAC...AAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCAATAAATACAAAATCCCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS-3UTR CAA 90 bp | TTTTGTATTTATTGCATTGGGAGCTTCTGGGAGCCTGGGGCCCTTAGCACAGATTGGAGTATAGGGCTGTaGGGCTTGGACTTATACGAA | + |
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Preference number: 5 (lower is better) Translates to: FCIYCIGSFWEPGALSTDWSIGL*GLDLYE Trigger: TTCGTATAAGTCCAAGCCCAACAGCCCTATACTCCA...ATCTGTGCTAAGGGCCCCAGGCTCCCAGAAGCTCCCAATGCAATAAATACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS CAA 72 bp | CTCAGCTCCCCTCTACAGGCCCGAAGTCCCCTGGTCTaGGCCACGGTGCAGAGCCGGCCTGTGGCCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LSSPLQARSPLV*ATVQSRPVALR Trigger: CCTCAAGGCCACAGGCCGGCTCTGCACCGTGGCCAAGACCAGGGGACTTCGGGCCTGTAGAGGGGAGCTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS CCA 72 bp | GGGATGCCAGAGGCGGTGCTGATGCCGGCGCCCGTGTaGAAAACCACGCTGGAGGACTGCCACATTAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: GMPEAVLMPAPV*KTTLEDCHISR Trigger: CCGGCTAATGTGGCAGTCCTCCAGCGTGGTTTTCCACACGGGCGCCGGCATCAGCACCGCCTCTGGCATCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042923.9 |
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| CDS CCA 72 bp | TGTCTCTCAGCTCCCCTCTACAGGCCCGAAGTCCCCTaGTCTTGGCCACGGTGCAGAGCCGGCCTGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: CLSAPLYRPEVP*SWPRCRAGLWP Trigger: AGGCCACAGGCCGGCTCTGCACCGTGGCCAAGACCAGGGGACTTCGGGCCTGTAGAGGGGAGCTGAGAGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS CAA 90 bp | ACCACGCTGGAGGACTGCCACATTAGCCGGGCCAGCTCCCACACCTaGCGTTCCAGCTCCTCTGGTGGGTCGAAGATCTCGGGCAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: TTLEDCHISRASSHT*RSSSSGGSKISGSP Trigger: CGGGCTGCCCGAGATCTTCGACCCACCAGAGGAGCTGGAACGCAAGGTGTGGGAGCTGGCCCGGCTAATGTGGCAGTCCTCCAGCGTGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042923.9 |
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| CDS CAA 90 bp | ATGGTGTCTCTCAGCTCCCCTCTACAGGCCCGAAGTCCCCTGGTCTaGGCCACGGTGCAGAGCCGGCCTGTGGCCTTGAGGCCCATGGTG | + |
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Preference number: 6 (lower is better) Translates to: MVSLSSPLQARSPLV*ATVQSRPVALRPMV Trigger: CACCATGGGCCTCAAGGCCACAGGCCGGCTCTGCACCGTGGCCAAGACCAGGGGACTTCGGGCCTGTAGAGGGGAGCTGAGAGACACCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS TCA 72 bp | TCCCACTGGGGCGGATCTGCAGCGAGGTACCCAGGGTaGCAGACAGGTCTGCGGTCCTGCTGGCCTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: SHWGGSAARYPG*QTGLRSCWPHQ Trigger: CTGATGAGGCCAGCAGGACCGCAGACCTGTCTGTCACCCTGGGTACCTCGCTGCAGATCCGCCCCAGTGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS GCA 72 bp | ATGCCGGCGCCCGTGTGGAAAACCACGCTGGAGGACTaGCACATTAGCCGGGCCAGCTCCCACACCTTGCGT | + |
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Preference number: 6 (lower is better) Translates to: MPAPVWKTTLED*HISRASSHTLR Trigger: ACGCAAGGTGTGGGAGCTGGCCCGGCTAATGTGGCAGTCCTCCAGCGTGGTTTTCCACACGGGCGCCGGCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042923.9 |
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| CDS GCA 72 bp | TCTGCCAGCTTGTCCCTGGGGAAGCCCGAGCGCACGTaGAGCCCGTCTACGTTCTGGCTGACCAGGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SASLSLGKPERT*SPSTFWLTRKL Trigger: CAGCTTCCTGGTCAGCCAGAACGTAGACGGGCTGCACGTGCGCTCGGGCTTCCCCAGGGACAAGCTGGCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS GCA 72 bp | TTAGTGGCAAGGGGCAGGTTCCCACTGGGGCGGATCTaGAGCGAGGTACCCAGGGTGACAGACAGGTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: LVARGRFPLGRI*SEVPRVTDRSA Trigger: CGCAGACCTGTCTGTCACCCTGGGTACCTCGCTGCAGATCCGCCCCAGTGGGAACCTGCCCCTTGCCACTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS CCA 72 bp | TCGAGGGCCGAGCATTCTCGAAGGTGGTGTCAAACTTaGGGGCCAGGCCGCGTTCCTCCATGGTCCACACGC | + |
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Preference number: 6 (lower is better) Translates to: SRAEHSRRWCQT*GPGRVPPWSTR Trigger: GCGTGTGGACCATGGAGGAACGCGGCCTGGCCCCCAAGTTTGACACCACCTTCGAGAATGCTCGGCCCTCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 ENSMUST00000143424.2 |
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| CDS CCA 72 bp | GGGAAGCCCGAGCGCACGTGCAGCCCGTCTACGTTCTaGCTGACCAGGAAGCTGAGGAAGCCCATGCGTTCT | + |
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Preference number: 6 (lower is better) Translates to: GKPERTCSPSTF*LTRKLRKPMRS Trigger: AGAACGCATGGGCTTCCTCAGCTTCCTGGTCAGCCAGAACGTAGACGGGCTGCACGTGCGCTCGGGCTTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS CAA 90 bp | ATGTGGGTCTTCGAGGGCCGAGCATTCTCGAAGGTGGTGTCAAACTaGGGGGCCAGGCCGCGTTCCTCCATGGTCCACACGCCATGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: MWVFEGRAFSKVVSN*GARPRSSMVHTPWG Trigger: CCCCCATGGCGTGTGGACCATGGAGGAACGCGGCCTGGCCCCCAAGTTTGACACCACCTTCGAGAATGCTCGGCCCTCGAAGACCCACAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 ENSMUST00000143424.2 |
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| CDS CCA 72 bp | CCATGTGGGTCTTCGAGGGCCGAGCATTCTCGAAGGTaGTGTCAAACTTGGGGGCCAGGCCGCGTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PCGSSRAEHSRR*CQTWGPGRVPP Trigger: TGGAGGAACGCGGCCTGGCCCCCAAGTTTGACACCACCTTCGAGAATGCTCGGCCCTCGAAGACCCACATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 ENSMUST00000143424.2 |
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| CDS CCA 72 bp | CAAACATGTTTCCGTGCAGCTCTGCCAGCTTGTCCCTaGGGAAGCCCGAGCGCACGTGCAGCCCGTCTACGT | + |
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Preference number: 6 (lower is better) Translates to: QTCFRAALPACP*GSPSARAARLR Trigger: ACGTAGACGGGCTGCACGTGCGCTCGGGCTTCCCCAGGGACAAGCTGGCAGAGCTGCACGGAAACATGTTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS CAA 72 bp | TTCGAGGGCCGAGCATTCTCGAAGGTGGTGTCAAACTaGGGGGCCAGGCCGCGTTCCTCCATGGTCCACACG | + |
|
Preference number: 6 (lower is better) Translates to: FEGRAFSKVVSN*GARPRSSMVHT Trigger: CGTGTGGACCATGGAGGAACGCGGCCTGGCCCCCAAGTTTGACACCACCTTCGAGAATGCTCGGCCCTCGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 ENSMUST00000143424.2 |
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| CDS TCA 72 bp | CTGACCAGGAAGCTGAGGAAGCCCATGCGTTCTAGCTaGACCAGGGCCATGTGGGTCTTCGAGGGCCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LTRKLRKPMRSS*TRAMWVFEGRA Trigger: TGCTCGGCCCTCGAAGACCCACATGGCCCTGGTTCAGCTAGAACGCATGGGCTTCCTCAGCTTCCTGGTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS GCA 72 bp | ATGCGCAGGTCAGCCTGGCGGTCATGTTTTGTGGGTTaGAGGTTGACAATGACCAGACGGCCTCCTCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: MRRSAWRSCFVG*RLTMTRRPPRR Trigger: GCGCCGAGGAGGCCGTCTGGTCATTGTCAACCTGCAACCCACAAAACATGACCGCCAGGCTGACCTGCGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS CAA 72 bp | GATGCGCAGGTCAGCCTGGCGGTCATGTTTTGTGGGTaGCAGGTTGACAATGACCAGACGGCCTCCTCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: DAQVSLAVMFCG*QVDNDQTASSA Trigger: CGCCGAGGAGGCCGTCTGGTCATTGTCAACCTGCAACCCACAAAACATGACCGCCAGGCTGACCTGCGCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS CAA 72 bp | TTGAGTGCTACTGGGCGAGGCAGAGGTGGCAGGGCTTaGTCTAGCACGCAGGGTCCATCCCAGGCTGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: LSATGRGRGGRA*SSTQGPSQAGI Trigger: GATTCCAGCCTGGGATGGACCCTGCGTGCTAGACAAAGCCCTGCCACCTCTGCCTCGCCCAGTAGCACTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS GCA 72 bp | GGGACATTCCTCTACAAACATGTTTCCGTGCAGCTCTaGCAGCTTGTCCCTGGGGAAGCCCGAGCGCACGTG | + |
|
Preference number: 6 (lower is better) Translates to: GTFLYKHVSVQL*QLVPGEARAHV Trigger: CACGTGCGCTCGGGCTTCCCCAGGGACAAGCTGGCAGAGCTGCACGGAAACATGTTTGTAGAGGAATGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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| CDS TCA 72 bp | CATCCCAGGCTGGAATCTCCAGCCCCAGATGCTTCATaGGTCTGCACATCACCTCATCCACGTAGCCGTGGA | + |
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Preference number: 6 (lower is better) Translates to: HPRLESPAPDAS*VCTSPHPRSRG Trigger: TCCACGGCTACGTGGATGAGGTGATGTGCAGACTCATGAAGCATCTGGGGCTGGAGATTCCAGCCTGGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042923.9 ENSMUST00000119324.8 |
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