Pregenerated sensors for SIRT5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054021Ensembl transcript IDs: ENSMUST00000066804.5, ENSMUST00000220458.2, ENSMUST00000220576.2, ENSMUST00000220645.2, ENSMUST00000221481.2, ENSMUST00000221515.2, ENSMUST00000222106.2, ENSMUST00000223194.2
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAAGGTTCTTGGTGCCAGCCTTGCGATGCAACTCGTCAATGTTCTaGGTGATGACCACAACCCGTCTGCCCTGGTCACGAAGCCGGGCT | + |
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Preference number: 1 (lower is better) Translates to: RRFLVPALRCNSSMF*VMTTTRLPWSRSRA Trigger: AGCCCGGCTTCGTGACCAGGGCAGACGGGTTGTGGTCATCACCCAGAACATTGACGAGTTGCATCGCAAGGCTGGCACCAAGAACCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220645.2 |
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| 3UTR TCA 90 bp | TCGGTGCCCAGCTACACAGGCAGAGAAAGCCTTGCTTTCTACTTATaGTGGCACAGCCAGGGTAGCACCAACTACCCCATCAAATGTGGC | + |
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Preference number: 1 (lower is better) Translates to: SVPSYTGRESLAFYL*WHSQGSTNYPIKCG Trigger: GCCACATTTGATGGGGTAGTTGGTGCTACCCTGGCTGTGCCATCATAAGTAGAAAGCAAGGCTTTCTCTGCCTGTGTAGCTGGGCACCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR CCA 90 bp | TGGCACAGCCAGGGTAGCACCAACTACCCCATCAAATGTGGCCACTaGGACTTAAAAGCAAGGGCTCTTCAAATAAGTGACATCATTCTC | + |
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Preference number: 1 (lower is better) Translates to: WHSQGSTNYPIKCGH*DLKARALQISDIIL Trigger: GAGAATGATGTCACTTATTTGAAGAGCCCTTGCTTTTAAGTCCCAGTGGCCACATTTGATGGGGTAGTTGGTGCTACCCTGGCTGTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR CCA 90 bp | TCAGCATTCAGCTGCAAGTACCTTTCCTTGCCACATGCCAATCAATaGGTTACCTTATTAACTATAATCACCTCTCCTGGACTCTCCCCT | + |
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Preference number: 1 (lower is better) Translates to: SAFSCKYLSLPHANQ*VTLLTIITSPGLSP Trigger: AGGGGAGAGTCCAGGAGAGGTGATTATAGTTAATAAGGTAACCCATTGATTGGCATGTGGCAAGGAAAGGTACTTGCAGCTGAATGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR TCA 90 bp | AATTCAAGGCCAAACATATTCCACTTTACTTCTGATAGACTGTCTTaGATTTCCTTAGAAAGTTCAAGATCAGACTTACCTCGTAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: NSRPNIFHFTSDRLS*ISLESSRSDLPRKA Trigger: AGCTTTACGAGGTAAGTCTGATCTTGAACTTTCTAAGGAAATTCAAGACAGTCTATCAGAAGTAAAGTGGAATATGTTTGGCCTTGAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGTTTGTCGACTGGGATTCTGGCGTCTTGAGTCTCTGGCTCTGGGGCCCCGTGCCAGCCTTGCGATaGAACTCGTCAATGTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GKFVDWDSGVLSLWLWGPVPALR*NSSMFW Trigger: CCAGAACATTGACGAGTTGCATCGCAAGGCTGGCAC...GGGGCCCCAGAGCCAGAGACTCAAGACGCCAGAATCCCAGTCGACAAACTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220645.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGTTTGTCGACTGGGATTCTGGCGTCTTGAGTCTCTGGCTCTGGGGCCCCCCAGAAGGTTCTTGGTaGCAGCCTTGCGATGCAACT | + |
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Preference number: 2 (lower is better) Translates to: GKFVDWDSGVLSLWLWGPPEGSW*QPCDAT Trigger: AGTTGCATCGCAAGGCTGGCACCAAGAACCTTCTGG...GGGGCCCCAGAGCCAGAGACTCAAGACGCCAGAATCCCAGTCGACAAACTTCCC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000220645.2 |
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| 3UTR-3UTR CCA 90 bp | TCTAGTCTCCACCAGGAATCAGCATTCAGCTGCAAGTACCTTTCCTTGCCACATAACTGTACTATCTGTTaGGATGGCATCCCCACGCCC | + |
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Preference number: 2 (lower is better) Translates to: SSLHQESAFSCKYLSLPHNCTIC*DGIPTP Trigger: GGGCGTGGGGATGCCATCCCAACAGATAGTACAGTT...ATGTGGCAAGGAAAGGTACTTGCAGCTGAATGCTGATTCCTGGTGGAGACTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTCCACCAGGAATCAGCATTCAGCTGCAAGTACCTTTCCTTGCCACATGCCATATAATCACCTCTCCTaGACTCTCCCCTCTGACCAT | + |
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Preference number: 2 (lower is better) Translates to: VSTRNQHSAASTFPCHMPYNHLS*TLPSDH Trigger: ATGGTCAGAGGGGAGAGTCCAGGAGAGGTGATTATA...TGGCATGTGGCAAGGAAAGGTACTTGCAGCTGAATGCTGATTCCTGGTGGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGCTACACAGGCAGAGAAAGCCTTGCTTTCTACTTATGATGGCACAGCCAGGGGAAATGGTGTCTGTTaGCTACATATAAAGGCCGCT | + |
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Preference number: 2 (lower is better) Translates to: PATQAEKALLSTYDGTARGNGVC*LHIKAA Trigger: AGCGGCCTTTATATGTAGGCAACAGACACCATTTCC...CCTGGCTGTGCCATCATAAGTAGAAAGCAAGGCTTTCTCTGCCTGTGTAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATTACTATCTGTTGGGATaGCATCCCCACGCCCACCCT | + |
|
Preference number: 2 (lower is better) Translates to: FPRVQDPWKGLYTYFVYHYYLLG*HPHAHP Trigger: AGGGTGGGCGTGGGGATGCCATCCCAACAGATAGTA...ATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR CAA 90 bp | CCAGGAAAGACGCAACAAACCAGAATCTTCTGCGGCAAAGCTTTATaGCTTACATCTTCAGGAGCCAGAGTGCAAGAAGCAAGAGAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: PGKTQQTRIFCGKAL*LTSSGARVQEARER Trigger: TCTCTCTCTTGCTTCTTGCACTCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTGCCGCAGAAGATTCTGGTTTGTTGCGTCTTTCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR-3UTR CCA 90 bp | TCACCGAAGAAAGCCGATCTGATGGGGAAATGGTGTCTGTTGCCTACATATAAACCGCAGTTCTGGTTCTaGAATGAGGGATCTTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: SPKKADLMGKWCLLPTYKPQFWF*NEGSSL Trigger: CAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGG...TTTATATGTAGGCAACAGACACCATTTCCCCATCAGATCGGCTTTCTTCGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTTAACTTTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTAGTCACCGGGTGTGGTaGTGCACGCCTTTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: TLTFPRVQDPWKGLYTYFSHRVW*CTPLIP Trigger: TGGGATTAAAGGCGTGCACCACCACACCCGGTGACT...AAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAAGTTAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR CAA 90 bp | TCTAGTCTCCACCAGGAATCAGCATTCAGCTGCAAGTACCTTTCCTaGCCACATGCCAATCAATGGGTTACCTTATTAACTATAATCACC | + |
|
Preference number: 2 (lower is better) Translates to: SSLHQESAFSCKYLS*PHANQWVTLLTIIT Trigger: GGTGATTATAGTTAATAAGGTAACCCATTGATTGGCATGTGGCAAGGAAAGGTACTTGCAGCTGAATGCTGATTCCTGGTGGAGACTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR-3UTR CCA 90 bp | AGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGTTCCGCAGTTCTGGTTCTaGAATGAGGGATCTTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: RPLERPVYLFCVPYFLFVPQFWF*NEGSSL Trigger: CAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGG...AACAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
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| 3UTR CAA 90 bp | CCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTaGTTCCTACTCTCTCTCCCCACTTTACTTCTGATAGCTTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: PWKGLYTYFVYHISS*FLLSLPTLLLIACP Trigger: AGGACAAGCTATCAGAAGTAAAGTGGGGAGAGAGAGTAGGAACAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCACCAGCTGAAAAGTTCTaGATTCATACAGTTGAATCC | + |
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Preference number: 2 (lower is better) Translates to: FSSGSRPLERPVYLFCVPPAEKF*IHTVES Trigger: GGATTCAACTGTATGAATTCAGAACTTTTCAGCTGG...TGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGTTCCTCCAGCTGAAAAGTTCTaGATTCATACAGTTGAATCC | + |
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Preference number: 2 (lower is better) Translates to: PLERPVYLFCVPYFLFVPPAEKF*IHTVES Trigger: GGATTCAACTGTATGAATTCAGAACTTTTCAGCTGG...AGGAACAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATGTTGAAAACTACAGATaGAAGTATAAAGTCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: FPRVQDPWKGLYTYFVYHVENYR*KYKVWR Trigger: TCTCCAGACTTTATACTTGCATCTGTAGTTTTCAAC...ATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGTTCCTCTGATAGCTTGTCCTaGATTTCCTCTAGAATTTTC | + |
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Preference number: 2 (lower is better) Translates to: TLGKACILILCTIFPLCSSDSLS*ISSRIF Trigger: GAAAATTCTAGAGGAAATTCAGGACAAGCTATCAGA...GGAACAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
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| 3UTR-3UTR CAA 90 bp | GGGAAGTTTGTCGACTGGGATTCTGGCGTCTTGAGTCTCTGGCTCTGGGGCCCCTTCTTGGTGCCAGCCTaGCGATGCAACTCGTCAATG | + |
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Preference number: 3 (lower is better) Translates to: GKFVDWDSGVLSLWLWGPFLVPA*RCNSSM Trigger: CATTGACGAGTTGCATCGCAAGGCTGGCACCAAGAA...GGGGCCCCAGAGCCAGAGACTCAAGACGCCAGAATCCCAGTCGACAAACTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220645.2 |
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| 3UTR CCA 72 bp | TTGGTGCCAGCCTTGCGATGCAACTCGTCAATGTTCTaGGTGATGACCACAACCCGTCTGCCCTGGTCACGA | + |
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Preference number: 3 (lower is better) Translates to: LVPALRCNSSMF*VMTTTRLPWSR Trigger: TCGTGACCAGGGCAGACGGGTTGTGGTCATCACCCAGAACATTGACGAGTTGCATCGCAAGGCTGGCACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220645.2 |
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| 3UTR TCA 72 bp | AGCTACACAGGCAGAGAAAGCCTTGCTTTCTACTTATaGTGGCACAGCCAGGGTAGCACCAACTACCCCATC | + |
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Preference number: 3 (lower is better) Translates to: SYTGRESLAFYL*WHSQGSTNYPI Trigger: GATGGGGTAGTTGGTGCTACCCTGGCTGTGCCATCATAAGTAGAAAGCAAGGCTTTCTCTGCCTGTGTAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR GCA 72 bp | GACCGGCCAGGAAAGACGCAACAAACCAGAATCTTCTaGGGCAAAGCTTTATTGCTTACATCTTCAGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: DRPGKTQQTRIF*GKALLLTSSGA Trigger: GGCTCCTGAAGATGTAAGCAATAAAGCTTTGCCGCAGAAGATTCTGGTTTGTTGCGTCTTTCCTGGCCGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR TCA 72 bp | CTGGTCTACCATCTCTGTGTAGGCCATATGCAAATCTaGCAAAGGATCCCTGGGGACCAGTCAGACAAAACA | + |
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Preference number: 3 (lower is better) Translates to: LVYHLCVGHMQI*QRIPGDQSDKT Trigger: TGTTTTGTCTGACTGGTCCCCAGGGATCCTTTGTCAGATTTGCATATGGCCTACACAGAGATGGTAGACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221515.2 ENSMUST00000222106.2 |
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| 3UTR CCA 72 bp | CAGGGTAGCACCAACTACCCCATCAAATGTGGCCACTaGGACTTAAAAGCAAGGGCTCTTCAAATAAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: QGSTNYPIKCGH*DLKARALQISD Trigger: GTCACTTATTTGAAGAGCCCTTGCTTTTAAGTCCCAGTGGCCACATTTGATGGGGTAGTTGGTGCTACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR-3UTR CAA 90 bp | GCGAATGTGGGCGCGGCTCCCAACAATATATTTCAAGGCAAACATTTGTCATTTTTCTACCTTGGGCCTTaGTGTCAGGTAGACCAGAAT | + |
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Preference number: 3 (lower is better) Translates to: ANVGAAPNNIFQGKHLSFFYLGP*CQVDQN Trigger: ATTCTGGTCTACCTGACACAAAGGCCCAAGGTAGAA...AAATGACAAATGTTTGCCTTGAAATATATTGTTGGGAGCCGCGCCCACATTCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR TCA 72 bp | ACTCACTGGTACTCTCGTTCCCCAGCTGAAAAGTTCTaGATTCATACAGTTGAATCCTTCTTAACAGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: THWYSRSPAEKF*IHTVESFLTVC Trigger: GCAGACTGTTAAGAAGGATTCAACTGTATGAATTCAGAACTTTTCAGCTGGGGAACGAGAGTACCAGTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
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| 3UTR TCA 72 bp | ATTTACTGTAACAGCACTCACCGAAGAAAGCCGATCTaGTGGGGAAATGGTGTCTGTTGCCTACATATAAAG | + |
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Preference number: 3 (lower is better) Translates to: IYCNSTHRRKPI*WGNGVCCLHIK Trigger: CTTTATATGTAGGCAACAGACACCATTTCCCCATCAGATCGGCTTTCTTCGGTGAGTGCTGTTACAGTAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221515.2 ENSMUST00000222106.2 |
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| 3UTR TCA 72 bp | CCACTGGGACTTAAAAGCAAGGGCTCTTCAAATAAGTaGCATCATTCTCTACTTAGCTTTCGGGCTAATTCC | + |
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Preference number: 3 (lower is better) Translates to: PLGLKSKGSSNK*HHSLLSFRANS Trigger: GGAATTAGCCCGAAAGCTAAGTAGAGAATGATGTCACTTATTTGAAGAGCCCTTGCTTTTAAGTCCCAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR CCA 72 bp | TCTGGAGAAGAATATATTGTGCCAACGGGAAAACCATaGAAACTCCCATGTAGCGAAACACACATTAACACC | + |
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Preference number: 3 (lower is better) Translates to: SGEEYIVPTGKP*KLPCSETHINT Trigger: GGTGTTAATGTGTGTTTCGCTACATGGGAGTTTCCATGGTTTTCCCGTTGGCACAATATATTCTTCTCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221515.2 ENSMUST00000222106.2 |
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| 3UTR CCA 72 bp | AGCTGCAAGTACCTTTCCTTGCCACATGCCAATCAATaGGTTACCTTATTAACTATAATCACCTCTCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: SCKYLSLPHANQ*VTLLTIITSPG Trigger: TCCAGGAGAGGTGATTATAGTTAATAAGGTAACCCATTGATTGGCATGTGGCAAGGAAAGGTACTTGCAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR TCA 72 bp | ACTCTCTCTCCCCACTTTACTTCTGATAGCTTGTCCTaGATTTCCTCTAGAATTTTCAGCCCTATCTTAATC | + |
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Preference number: 3 (lower is better) Translates to: TLSPHFTSDSLS*ISSRIFSPILI Trigger: GATTAAGATAGGGCTGAAAATTCTAGAGGAAATTCAGGACAAGCTATCAGAAGTAAAGTGGGGAGAGAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
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| 3UTR GCA 72 bp | ATCAGCATTCAGCTGCAAGTACCTTTCCTTGCCACATaGCAATCAATGGGTTACCTTATTAACTATAATCAC | + |
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Preference number: 3 (lower is better) Translates to: ISIQLQVPFLAT*QSMGYLINYNH Trigger: GTGATTATAGTTAATAAGGTAACCCATTGATTGGCATGTGGCAAGGAAAGGTACTTGCAGCTGAATGCTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
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| 3UTR CCA 72 bp | TACCTAACCTTAACTTTTCCTCGGGTTCAAGACCCTTaGAAAGGCCTGTATACTTATTTTGTGTACCATATT | + |
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Preference number: 3 (lower is better) Translates to: YLTLTFPRVQDP*KGLYTYFVYHI Trigger: AATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAAGTTAAGGTTAGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
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| 3UTR CCA 72 bp | CATCTAGTTGAAAACTACAGATGCAAGTATAAAGTCTaGAGAAGAATATATTGTGCCAACGGGAAAACCATG | + |
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Preference number: 3 (lower is better) Translates to: HLVENYRCKYKV*RRIYCANGKTM Trigger: CATGGTTTTCCCGTTGGCACAATATATTCTTCTCCAGACTTTATACTTGCATCTGTAGTTTTCAACTAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221515.2 ENSMUST00000222106.2 |
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| CDS-3UTR TCA 90 bp | ACCGCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTTGCGCCAGTCCCCCCCTGGAAGCCACCTaGGGGGCAAACATGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: TATRSSGSGMRDLPCASPPLEAT*GANMAA Trigger: GGCTGCCATGTTTGCCCCTCAGGTGGCTTCCAGGGG...GGGACTGGCGCAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGGGTCGCGGT 63% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
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| CDS-3UTR CCA 90 bp | GCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTTGCGCCAGTCCCGAGAGCCGGGCTTCACACTaGGCAATGGCCAGGTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: ATRSSGSGMRDLPCASPESRASH*AMARCP Trigger: CGGGCACCTGGCCATTGCCCAGTGTGAAGCCCGGCT...CTCGGGACTGGCGCAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGGGTCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
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| CDS-3UTR GCA 90 bp | ACCGCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTTGCGCCAGTCCCAAAGGCCTGAGGGGTTaGCAGGTCCTGAGCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: TATRSSGSGMRDLPCASPKGLRG*QVLSLP Trigger: TGGCAGGCTCAGGACCTGGCAACCCCTCAGGCCTTT...GGGACTGGCGCAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGGGTCGCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
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| CDS-3UTR CCA 90 bp | ACCGCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTTGCGCCAGTCCCCCTGAGGGGCAAACATaGCAGCCGGGTAGACCACAG | + |
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Preference number: 4 (lower is better) Translates to: TATRSSGSGMRDLPCASPPEGQT*QPGRPQ Trigger: CTGTGGTCTACCCGGCTGCCATGTTTGCCCCTCAGG...GGGACTGGCGCAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGGGTCGCGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
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| CDS-3UTR TCA 90 bp | GCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTTGCGCCAGTCCCGAGGTTCTTTGCTCCGCATaGCCTCCCTCCGGTAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: ATRSSGSGMRDLPCASPEVLCSA*PPSGSG Trigger: ACCACTACCGGAGGGAGGTCATGCGGAGCAAAGAAC...CTCGGGACTGGCGCAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGGGTCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
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| CDS-3UTR TCA 90 bp | GGGGAAGTTTGTCGACTGGGATTCTGGCGTCTTGAGTCTCTGGCTCTGGGGCCCGTTCTTTGCTCCGCATaGCCTCCCTCCGGTAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GEVCRLGFWRLESLALGPVLCSA*PPSGSG Trigger: ACCACTACCGGAGGGAGGTCATGCGGAGCAAAGAAC...GGGCCCCAGAGCCAGAGACTCAAGACGCCAGAATCCCAGTCGACAAACTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220645.2 |
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| CDS-3UTR CCA 90 bp | TTCTCACGACCGGCCAGGAAAGACGCAACAAACCAGAATCTTCTGCGGCAAAGCAGCCGGGCTTCACACTaGGCAATGGCCAGGTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: FSRPARKDATNQNLLRQSSRASH*AMARCP Trigger: CGGGCACCTGGCCATTGCCCAGTGTGAAGCCCGGCT...GCTTTGCCGCAGAAGATTCTGGTTTGTTGCGTCTTTCCTGGCCGGTCGTGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
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| CDS-3UTR TCA 90 bp | ACCGCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTTGCGCCAGTCCCTTGGACGAGCCATGGTaGGGCAGATCTTGCTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: TATRSSGSGMRDLPCASPLDEPW*GRSCFV Trigger: CACAAAGCAAGATCTGCCTCACCATGGCTCGTCCAA...GGGACTGGCGCAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGGGTCGCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
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| CDS-3UTR CCA 90 bp | TACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCTGGTCTACCATCTCAGCCGGGCTTCACACTaGGCAATGGCCAGGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: YTVAVFRHTRRGHLVYHLSRASH*AMARCP Trigger: CGGGCACCTGGCCATTGCCCAGTGTGAAGCCCGGCT...GAGATGGTAGACCAGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR CCA 90 bp | TACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCTGGTCTACCATCTCCTTCACACTGGGCAATaGCCAGGTGCCCGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTVAVFRHTRRGHLVYHLLHTGQ*PGARGW Trigger: CCAACCCCGGGCACCTGGCCATTGCCCAGTGTGAAG...GAGATGGTAGACCAGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCTTAGCCGGGCTTCACACTaGGCAATGGCCAGGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SRVQLTIHKAIFPVSALLSRASH*AMARCP Trigger: CGGGCACCTGGCCATTGCCCAGTGTGAAGCCCGGCT...AAGCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR TCA 90 bp | AGCTGGGCAGATCGGACTCCTATAGTTCTCGGCAACAGTGCCACACGAGGTACATTGGACGAGCCATGGTaGGGCAGATCTTGCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWADRTPIVLGNSATRGTLDEPW*GRSCFV Trigger: CACAAAGCAAGATCTGCCTCACCATGGCTCGTCCAA...TGTACCTCGTGTGGCACTGTTGCCGAGAACTATAGGAGTCCGATCTGCCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220645.2 |
||
| CDS-3UTR TCA 90 bp | TATTACCGCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTTGCGCCAGTTGGACGAGCCATGGTaGGGCAGATCTTGCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YYRDPQFWFWNEGSSLRQLDEPW*GRSCFV Trigger: CACAAAGCAAGATCTGCCTCACCATGGCTCGTCCAA...CTGGCGCAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGGGTCGCGGTAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCTGGTCTACCATCTCTGTGTGGGGTTGCCAGGTCCTaGGCCTGCCATTTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSCLQTHQKRASGLPSLCGVARS*ACHFLQ Trigger: CTGGAGAAAATGGCAGGCTCAGGACCTGGCAACCCC...ACACAGAGATGGTAGACCAGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR GCA 90 bp | TATTACCGCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTTGCGCCAGCCAGAAGGTTCTTGGTaGCAGCCTTGCGATGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: YYRDPQFWFWNEGSSLRQPEGSW*QPCDAT Trigger: AGTTGCATCGCAAGGCTGGCACCAAGAACCTTCTGG...CTGGCGCAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGGGTCGCGGTAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCAGAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCCTTCACACTGGGCAATaGCCAGGTGCCCGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPEFSSPSIKPFFPLVPCLHTGQ*PGARGW Trigger: CCAACCCCGGGCACCTGGCCATTGCCCAGTGTGAAG...GCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTCTGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCTTTAGCGGGGTTGCCAGGTCCTaGGCCTGCCATTTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EFSSPSIKPFFPLVPCFSGVARS*ACHFLQ Trigger: CTGGAGAAAATGGCAGGCTCAGGACCTGGCAACCCC...GCTAAAGCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR TCA 90 bp | CACATTTGCTGCTGGTATTTTGAAACCCATCACGTAACAGATTGTCTGCTTGGGCCCCTGGAAGCCACCTaGGGGGCAAACATGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HICCWYFETHHVTDCLLGPLEAT*GANMAA Trigger: GGCTGCCATGTTTGCCCCTCAGGTGGCTTCCAGGGG...CCCAAGCAGACAATCTGTTACGTGATGGGTTTCAAAATACCAGCAGCAAATGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCAGAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCAAAGGCCTGAGGGGTTaGCAGGTCCTGAGCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPEFSSPSIKPFFPLVPCKGLRG*QVLSLP Trigger: TGGCAGGCTCAGGACCTGGCAACCCCTCAGGCCTTT...GCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTCTGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCTTCCTGAGGGGCAAACATaGCAGCCGGGTAGACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SRVQLTIHKAIFPVSALLPEGQT*QPGRPQ Trigger: CTGTGGTCTACCCGGCTGCCATGTTTGCCCCTCAGG...AAGCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCAGAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCCCTGAGGGGCAAACATaGCAGCCGGGTAGACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FPEFSSPSIKPFFPLVPCPEGQT*QPGRPQ Trigger: CTGTGGTCTACCCGGCTGCCATGTTTGCCCCTCAGG...GCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTCTGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CCA 90 bp | CACATTTGCTGCTGGTATTTTGAAACCCATCACGTAACAGATTGTCTGCTTGGGCCACCGGGACTCCCCTaGAAGCCACCTGAGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HICCWYFETHHVTDCLLGPPGLP*KPPEGQ Trigger: TTGCCCCTCAGGTGGCTTCCAGGGGAGTCCCGGTGG...CCCAAGCAGACAATCTGTTACGTGATGGGTTTCAAAATACCAGCAGCAAATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CCA 90 bp | AAACCAGAATCTTCTGCGGCAAAGCTTTATTGCTTACATCTTCAGGAGCCAGAGCCACCGGGACTCCCCTaGAAGCCACCTGAGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KPESSAAKLYCLHLQEPEPPGLP*KPPEGQ Trigger: TTGCCCCTCAGGTGGCTTCCAGGGGAGTCCCGGTGG...CTCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTGCCGCAGAAGATTCTGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
||
| 3UTR CAA 72 bp | ACCAATCGGTGCCCAGCTACACAGGCAGAGAAAGCCTaGCTTTCTACTTATGATGGCACAGCCAGGGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TNRCPATQAEKA*LSTYDGTARVA Trigger: TGCTACCCTGGCTGTGCCATCATAAGTAGAAAGCAAGGCTTTCTCTGCCTGTGTAGCTGGGCACCGATTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCTTTAGCGTTCTTTGCTCCGCATaGCCTCCCTCCGGTAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EFSSPSIKPFFPLVPCFSVLCSA*PPSGSG Trigger: ACCACTACCGGAGGGAGGTCATGCGGAGCAAAGAAC...GCTAAAGCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCTTGTTCTTTGCTCCGCATaGCCTCCCTCCGGTAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRVQLTIHKAIFPVSALLVLCSA*PPSGSG Trigger: ACCACTACCGGAGGGAGGTCATGCGGAGCAAAGAAC...AAGCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCTGGTCTACCATCTCTGTGTTACACAGAGAAACCCTaGATCTGTCGGTGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSCLQTHQKRASGLPSLCYTEKP*ICRWLG Trigger: CCCCAGCCACCGACAGATTCAGGGTTTCTCTGTGTA...ACACAGAGATGGTAGACCAGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCACGACCGGCCAGGAAAGACGCAACAAACCAGAATCTTCTGCGGCAAAGCTCTTGGTGCCAGCCTTaGGATGCAACTCGTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: FSRPARKDATNQNLLRQSSWCQP*DATRQC Trigger: ACATTGACGAGTTGCATCGCAAGGCTGGCACCAAGA...GCTTTGCCGCAGAAGATTCTGGTTTGTTGCGTCTTTCCTGGCCGGTCGTGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCACCACCGGGACTCCCCTaGAAGCCACCTGAGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSSGSRPLERPVYLFCVPPPGLP*KPPEGQ Trigger: TTGCCCCTCAGGTGGCTTCCAGGGGAGTCCCGGTGG...TGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
||
| CDS-3UTR CCA 90 bp | TATTTTTCCAGAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCCACCGGGACTCCCCTaGAAGCCACCTGAGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YFSRVQLTIHKAIFPVSAPPGLP*KPPEGQ Trigger: TTGCCCCTCAGGTGGCTTCCAGGGGAGTCCCGGTGG...GGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTCTGGAAAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCACGACCGGCCAGGAAAGACGCAACAAACCAGAATCTTCTGCGGCAAAGCGAATCTGTCGGTGGCTaGGGTGGTCTCCATGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSRPARKDATNQNLLRQSESVGG*GGLHVK Trigger: TTTAACATGGAGACCACCCCAGCCACCGACAGATTC...GCTTTGCCGCAGAAGATTCTGGTTTGTTGCGTCTTTCCTGGCCGGTCGTGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
||
| CDS-3UTR CCA 90 bp | TACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCTGGTCTACCATCTCAGTCACCGGGTGTGGTaGTGCACGCCTTTAATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YTVAVFRHTRRGHLVYHLSHRVW*CTPLIP Trigger: TGGGATTAAAGGCGTGCACCACCACACCCGGTGACT...GAGATGGTAGACCAGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR TCA 90 bp | CACATTTGCTGCTGGTATTTTGAAACCCATCACGTAACAGATTGTCTGCTTGGGGGGGTTGCCAGGTCCTaGGCCTGCCATTTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HICCWYFETHHVTDCLLGGVARS*ACHFLQ Trigger: CTGGAGAAAATGGCAGGCTCAGGACCTGGCAACCCC...CCCAAGCAGACAATCTGTTACGTGATGGGTTTCAAAATACCAGCAGCAAATGTG 51% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR TCA 90 bp | AATGTGGGCGCGGCTCCCAACAATATATTTCAAGGCAAACATTTGTCATTTTTCCCCCTGGAAGCCACCTaGGGGGCAAACATGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NVGAAPNNIFQGKHLSFFPLEAT*GANMAA Trigger: GGCTGCCATGTTTGCCCCTCAGGTGGCTTCCAGGGG...GAAAAATGACAAATGTTTGCCTTGAAATATATTGTTGGGAGCCGCGCCCACATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCTGGTCTACCATCTCTGTGTCCAGAAGGTTCTTGGTaGCAGCCTTGCGATGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: CSCLQTHQKRASGLPSLCPEGSW*QPCDAT Trigger: AGTTGCATCGCAAGGCTGGCACCAAGAACCTTCTGG...ACACAGAGATGGTAGACCAGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGTTCTTGGTGCCAGCCTTGCGATGCAACTCGTCAATGTTCTGGGTGATCGTCTACAACACAACTaGGAAATGAATCGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QKVLGASLAMQLVNVLGDRLQHN*EMNRPG Trigger: TCCGGGCCGATTCATTTCCCAGTTGTGTTGTAGACG...ATCACCCAGAACATTGACGAGTTGCATCGCAAGGCTGGCACCAAGAACCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220645.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAAGAATATATTGTGCCAACGGGAAAACCATGGAAACTCCCATGTAGCGAACCTGAGGGGCAAACATaGCAGCCGGGTAGACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GEEYIVPTGKPWKLPCSEPEGQT*QPGRPQ Trigger: CTGTGGTCTACCCGGCTGCCATGTTTGCCCCTCAGG...TTCGCTACATGGGAGTTTCCATGGTTTTCCCGTTGGCACAATATATTCTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221515.2 ENSMUST00000222106.2 |
||
| CDS-3UTR CCA 90 bp | GCGAATGTGGGCGCGGCTCCCAACAATATATTTCAAGGCAAACATTTGTCATTTCCTGAGGGGCAAACATaGCAGCCGGGTAGACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ANVGAAPNNIFQGKHLSFPEGQT*QPGRPQ Trigger: CTGTGGTCTACCCGGCTGCCATGTTTGCCCCTCAGG...AAATGACAAATGTTTGCCTTGAAATATATTGTTGGGAGCCGCGCCCACATTCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCACCGGGACTCCCCTaGAAGCCACCTGAGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGFKTLGKACILILCTIFPPGLP*KPPEGQ Trigger: TTGCCCCTCAGGTGGCTTCCAGGGGAGTCCCGGTGG...AAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCTTTAGCTTGGACGAGCCATGGTaGGGCAGATCTTGCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EFSSPSIKPFFPLVPCFSLDEPW*GRSCFV Trigger: CACAAAGCAAGATCTGCCTCACCATGGCTCGTCCAA...GCTAAAGCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR TCA 90 bp | TATGAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCTGGTCTACTTGGACGAGCCATGGTaGGGCAGATCTTGCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YEYTVAVFRHTRRGHLVYLDEPW*GRSCFV Trigger: CACAAAGCAAGATCTGCCTCACCATGGCTCGTCCAA...GTAGACCAGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCAGGGGTTGCCAGGTCCTaGGCCTGCCATTTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSSGSRPLERPVYLFCVPGVARS*ACHFLQ Trigger: CTGGAGAAAATGGCAGGCTCAGGACCTGGCAACCCC...TGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGCGAAACACACATTAACACCCAGTCTGCTGTTAATGCCATTTTGTTCTTTCCCCTGGAAGCCACCTaGGGGGCAAACATGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CSETHINTQSAVNAILFFPLEAT*GANMAA Trigger: GGCTGCCATGTTTGCCCCTCAGGTGGCTTCCAGGGG...AAAGAACAAAATGGCATTAACAGCAGACTGGGTGTTAATGTGTGTTTCGCTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000221515.2 ENSMUST00000222106.2 |
||
| CDS-3UTR GCA 90 bp | TATTTTTCCAGAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCAAAGGCCTGAGGGGTTaGCAGGTCCTGAGCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YFSRVQLTIHKAIFPVSAKGLRG*QVLSLP Trigger: TGGCAGGCTCAGGACCTGGCAACCCCTCAGGCCTTT...GGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTCTGGAAAAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCAGAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCGTGCCAGCCTTGCGATaGAACTCGTCAATGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPEFSSPSIKPFFPLVPCVPALR*NSSMFW Trigger: CCAGAACATTGACGAGTTGCATCGCAAGGCTGGCAC...GCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTCTGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR GCA 90 bp | GAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCTTTAGCGTGCCAGCCTTGCGATaGAACTCGTCAATGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EFSSPSIKPFFPLVPCFSVPALR*NSSMFW Trigger: CCAGAACATTGACGAGTTGCATCGCAAGGCTGGCAC...GCTAAAGCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR GCA 90 bp | GTCTGCTTGGGGCTTGAAGGGTGTTTCCATATTTTTCCAGAGTTCAGCTCACCACCAGAAGGTTCTTGGTaGCAGCCTTGCGATGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: VCLGLEGCFHIFPEFSSPPEGSW*QPCDAT Trigger: AGTTGCATCGCAAGGCTGGCACCAAGAACCTTCTGG...TGGTGAGCTGAACTCTGGAAAAATATGGAAACACCCTTCAAGCCCCAAGCAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATACCTGAGGGGCAAACATaGCAGCCGGGTAGACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FLGFKTLGKACILILCTIPEGQT*QPGRPQ Trigger: CTGTGGTCTACCCGGCTGCCATGTTTGCCCCTCAGG...TATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
||
| CDS-3UTR CCA 90 bp | TACAGATGCAAGTATAAAGTCTGGAGAAGAATATATTGTGCCAACGGGAAAACCCCACCGGGACTCCCCTaGAAGCCACCTGAGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YRCKYKVWRRIYCANGKTPPGLP*KPPEGQ Trigger: TTGCCCCTCAGGTGGCTTCCAGGGGAGTCCCGGTGG...GGTTTTCCCGTTGGCACAATATATTCTTCTCCAGACTTTATACTTGCATCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000221515.2 ENSMUST00000222106.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTAACTTTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTGGGGTTGCCAGGTCCTaGGCCTGCCATTTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLTFPRVQDPWKGLYTYFGVARS*ACHFLQ Trigger: CTGGAGAAAATGGCAGGCTCAGGACCTGGCAACCCC...AAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAAGTTAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR TCA 90 bp | CTCACTGGTACTCTCGTTCCCCAGCTGAAAAGTTCTGAATTCATACAGTTGAATGTTCTTTGCTCCGCATaGCCTCCCTCCGGTAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTGTLVPQLKSSEFIQLNVLCSA*PPSGSG Trigger: ACCACTACCGGAGGGAGGTCATGCGGAGCAAAGAAC...ATTCAACTGTATGAATTCAGAACTTTTCAGCTGGGGAACGAGAGTACCAGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR TCA 90 bp | AATCAAATAATATGGAAGGACTTGACAGCCTCTTCCAGATCAAACACATTTGCTCCCCTGGAAGCCACCTaGGGGGCAAACATGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NQIIWKDLTASSRSNTFAPLEAT*GANMAA Trigger: GGCTGCCATGTTTGCCCCTCAGGTGGCTTCCAGGGG...AGCAAATGTGTTTGATCTGGAAGAGGCTGTCAAGTCCTTCCATATTATTTGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR TCA 90 bp | TGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGTTCCTACTCCCCCTGGAAGCCACCTaGGGGGCAAACATGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WKGLYTYFVYHISSLFLLPLEAT*GANMAA Trigger: GGCTGCCATGTTTGCCCCTCAGGTGGCTTCCAGGGG...GAGTAGGAACAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
||
| CDS-3UTR GCA 90 bp | GAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCTTTAGCTCTTGGTGCCAGCCTTaGGATGCAACTCGTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: EFSSPSIKPFFPLVPCFSSWCQP*DATRQC Trigger: ACATTGACGAGTTGCATCGCAAGGCTGGCACCAAGA...GCTAAAGCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCTTGAATCTGTCGGTGGCTaGGGTGGTCTCCATGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRVQLTIHKAIFPVSALLESVGG*GGLHVK Trigger: TTTAACATGGAGACCACCCCAGCCACCGACAGATTC...AAGCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGTCTCCACCAGGAATCAGCATTCAGCTGCAAGTACCTTTCCTTGCCACATGAATCTGTCGGTGGCTaGGGTGGTCTCCATGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSLHQESAFSCKYLSLPHESVGG*GGLHVK Trigger: TTTAACATGGAGACCACCCCAGCCACCGACAGATTC...ATGTGGCAAGGAAAGGTACTTGCAGCTGAATGCTGATTCCTGGTGGAGACTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCTGGTCTACCATCTCTGTGTAAAGTCTGCCATATTTaGACTTGGACGAGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSCLQTHQKRASGLPSLCKVCHI*TWTSHG Trigger: ACCATGGCTCGTCCAAGTTCAAATATGGCAGACTTT...ACACAGAGATGGTAGACCAGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR GCA 90 bp | TACAGATGCAAGTATAAAGTCTGGAGAAGAATATATTGTGCCAACGGGAAAACCAAAGGCCTGAGGGGTTaGCAGGTCCTGAGCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YRCKYKVWRRIYCANGKTKGLRG*QVLSLP Trigger: TGGCAGGCTCAGGACCTGGCAACCCCTCAGGCCTTT...GGTTTTCCCGTTGGCACAATATATTCTTCTCCAGACTTTATACTTGCATCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR GCA 90 bp | CTACCTAACCTTAACTTTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTCTTGGTGCCAGCCTTaGGATGCAACTCGTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LPNLNFSSGSRPLERPVYSWCQP*DATRQC Trigger: ACATTGACGAGTTGCATCGCAAGGCTGGCACCAAGA...GTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAAGTTAAGGTTAGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR CCA 90 bp | AATCAAATAATATGGAAGGACTTGACAGCCTCTTCCAGATCAAACACATTTGCTCTTCACACTGGGCAATaGCCAGGTGCCCGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NQIIWKDLTASSRSNTFALHTGQ*PGARGW Trigger: CCAACCCCGGGCACCTGGCCATTGCCCAGTGTGAAG...AGCAAATGTGTTTGATCTGGAAGAGGCTGTCAAGTCCTTCCATATTATTTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR TCA 90 bp | TACAGATGCAAGTATAAAGTCTGGAGAAGAATATATTGTGCCAACGGGAAAACCGTTCTTTGCTCCGCATaGCCTCCCTCCGGTAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YRCKYKVWRRIYCANGKTVLCSA*PPSGSG Trigger: ACCACTACCGGAGGGAGGTCATGCGGAGCAAAGAAC...GGTTTTCCCGTTGGCACAATATATTCTTCTCCAGACTTTATACTTGCATCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR TCA 90 bp | GACAGCCTCTTCCAGATCAAACACATTTGCTGCTGGTATTTTGAAACCCATCACGTCCTTTCAGTTTCATaGGGAGCAAGGGCTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSLFQIKHICCWYFETHHVLSVS*GARASG Trigger: TCCTGAAGCCCTTGCTCCTCATGAAACTGAAAGGAC...GTGATGGGTTTCAAAATACCAGCAGCAAATGTGTTTGATCTGGAAGAGGCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR GCA 90 bp | AGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGTTAAAGGCCTGAGGGGTTaGCAGGTCCTGAGCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPLERPVYLFCVPYFLFVKGLRG*QVLSLP Trigger: TGGCAGGCTCAGGACCTGGCAACCCCTCAGGCCTTT...AACAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCAGTGCCAGCCTTGCGATaGAACTCGTCAATGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSSGSRPLERPVYLFCVPVPALR*NSSMFW Trigger: CCAGAACATTGACGAGTTGCATCGCAAGGCTGGCAC...TGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR CCA 90 bp | CACATTTGCTGCTGGTATTTTGAAACCCATCACGTAACAGATTGTCTGCTTGGGCGTCTACAACACAACTaGGAAATGAATCGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HICCWYFETHHVTDCLLGRLQHN*EMNRPG Trigger: TCCGGGCCGATTCATTTCCCAGTTGTGTTGTAGACG...CCCAAGCAGACAATCTGTTACGTGATGGGTTTCAAAATACCAGCAGCAAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAAGAATATATTGTGCCAACGGGAAAACCATGGAAACTCCCATGTAGCGAACGTCTACAACACAACTaGGAAATGAATCGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GEEYIVPTGKPWKLPCSERLQHN*EMNRPG Trigger: TCCGGGCCGATTCATTTCCCAGTTGTGTTGTAGACG...TTCGCTACATGGGAGTTTCCATGGTTTTCCCGTTGGCACAATATATTCTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGTTCCTACTCTTCACACTGGGCAATaGCCAGGTGCCCGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LERPVYLFCVPYFLFVPTLHTGQ*PGARGW Trigger: CCAACCCCGGGCACCTGGCCATTGCCCAGTGTGAAG...AGTAGGAACAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR TCA 90 bp | TATTTTTCCAGAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCGTCCTTTCAGTTTCATaGGGAGCAAGGGCTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YFSRVQLTIHKAIFPVSAVLSVS*GARASG Trigger: TCCTGAAGCCCTTGCTCCTCATGAAACTGAAAGGAC...GGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTCTGGAAAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CCA 90 bp | CACATTTGCTGCTGGTATTTTGAAACCCATCACGTAACAGATTGTCTGCTTGGGAACTCGTCAATGTTCTaGGTGATGACCACAACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: HICCWYFETHHVTDCLLGNSSMF*VMTTTR Trigger: ACGGGTTGTGGTCATCACCCAGAACATTGACGAGTT...CCCAAGCAGACAATCTGTTACGTGATGGGTTTCAAAATACCAGCAGCAAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGACTTGACAGCCTCTTCCAGATCAAACACATTTGCTGCTGGTATTTTGAAGAATCTGTCGGTGGCTaGGGTGGTCTCCATGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: EGLDSLFQIKHICCWYFEESVGG*GGLHVK Trigger: TTTAACATGGAGACCACCCCAGCCACCGACAGATTC...TTCAAAATACCAGCAGCAAATGTGTTTGATCTGGAAGAGGCTGTCAAGTCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| 3UTR CAA 72 bp | TACACTGCCCAGTGTGCATCTTTCTACCTTGGGCCTTaGTGTCAGGTAGACCAGAATCTGGAAAGTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YTAQCASFYLGP*CQVDQNLESSF Trigger: AAAAGAACTTTCCAGATTCTGGTCTACCTGACACAAAGGCCCAAGGTAGAAAGATGCACACTGGGCAGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
||
| 3UTR CAA 72 bp | ACGCAACAAACCAGAATCTTCTGCGGCAAAGCTTTATaGCTTACATCTTCAGGAGCCAGAGTGCAAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQQTRIFCGKAL*LTSSGARVQEA Trigger: TGCTTCTTGCACTCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTGCCGCAGAAGATTCTGGTTTGTTGCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
||
| CDS-3UTR GCA 90 bp | TACAGATGCAAGTATAAAGTCTGGAGAAGAATATATTGTGCCAACGGGAAAACCGTGCCAGCCTTGCGATaGAACTCGTCAATGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YRCKYKVWRRIYCANGKTVPALR*NSSMFW Trigger: CCAGAACATTGACGAGTTGCATCGCAAGGCTGGCAC...GGTTTTCCCGTTGGCACAATATATTCTTCTCCAGACTTTATACTTGCATCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATAAACTCGTCAATGTTCTaGGTGATGACCACAACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FLGFKTLGKACILILCTINSSMF*VMTTTR Trigger: ACGGGTTGTGGTCATCACCCAGAACATTGACGAGTT...TATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR CCA 90 bp | TATTTTTCCAGAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCAACTCGTCAATGTTCTaGGTGATGACCACAACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: YFSRVQLTIHKAIFPVSANSSMF*VMTTTR Trigger: ACGGGTTGTGGTCATCACCCAGAACATTGACGAGTT...GGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTCTGGAAAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTGAATCTGTCGGTGGCTaGGGTGGTCTCCATGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGFKTLGKACILILCTIFESVGG*GGLHVK Trigger: TTTAACATGGAGACCACCCCAGCCACCGACAGATTC...AAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
||
| 3UTR CAA 72 bp | CACCAGGAATCAGCATTCAGCTGCAAGTACCTTTCCTaGCCACATGCCAATCAATGGGTTACCTTATTAACT | + |
|
Preference number: 4 (lower is better) Translates to: HQESAFSCKYLS*PHANQWVTLLT Trigger: AGTTAATAAGGTAACCCATTGATTGGCATGTGGCAAGGAAAGGTACTTGCAGCTGAATGCTGATTCCTGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222106.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGACTTGACAGCCTCTTCCAGATCAAACACATTTGCTGCTGGTATTTTGAAAAAGTCTGCCATATTTaGACTTGGACGAGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGLDSLFQIKHICCWYFEKVCHI*TWTSHG Trigger: ACCATGGCTCGTCCAAGTTCAAATATGGCAGACTTT...TTCAAAATACCAGCAGCAAATGTGTTTGATCTGGAAGAGGCTGTCAAGTCCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATAAAGTCTGCCATATTTaGACTTGGACGAGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPRVQDPWKGLYTYFVYHKVCHI*TWTSHG Trigger: ACCATGGCTCGTCCAAGTTCAAATATGGCAGACTTT...ATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR TCA 90 bp | TATTTTTCCAGAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCAAAGTCTGCCATATTTaGACTTGGACGAGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: YFSRVQLTIHKAIFPVSAKVCHI*TWTSHG Trigger: ACCATGGCTCGTCCAAGTTCAAATATGGCAGACTTT...GGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTCTGGAAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTACTTCTGATAGCTTGTCCTGAATTTCCTCTAGAATTTTCAGCCCTATCTCCAGAAGGTTCTTGGTaGCAGCCTTGCGATGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: TLLLIACPEFPLEFSALSPEGSW*QPCDAT Trigger: AGTTGCATCGCAAGGCTGGCACCAAGAACCTTCTGG...AGATAGGGCTGAAAATTCTAGAGGAAATTCAGGACAAGCTATCAGAAGTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR CCA 90 bp | TACAGATGCAAGTATAAAGTCTGGAGAAGAATATATTGTGCCAACGGGAAAACCGAATCTGTCGGTGGCTaGGGTGGTCTCCATGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: YRCKYKVWRRIYCANGKTESVGG*GGLHVK Trigger: TTTAACATGGAGACCACCCCAGCCACCGACAGATTC...GGTTTTCCCGTTGGCACAATATATTCTTCTCCAGACTTTATACTTGCATCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221515.2 ENSMUST00000222106.2 |
||
| CDS-3UTR GCA 90 bp | TTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGTTCCTACTGTGCCAGCCTTGCGATaGAACTCGTCAATGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LERPVYLFCVPYFLFVPTVPALR*NSSMFW Trigger: CCAGAACATTGACGAGTTGCATCGCAAGGCTGGCAC...AGTAGGAACAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR GCA 90 bp | AAGTATAAAGTCTGGAGAAGAATATATTGTGCCAACGGGAAAACCATGGAAACTTCTTGGTGCCAGCCTTaGGATGCAACTCGTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: KYKVWRRIYCANGKTMETSWCQP*DATRQC Trigger: ACATTGACGAGTTGCATCGCAAGGCTGGCACCAAGA...AGTTTCCATGGTTTTCCCGTTGGCACAATATATTCTTCTCCAGACTTTATACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR GCA 90 bp | AATCAAATAATATGGAAGGACTTGACAGCCTCTTCCAGATCAAACACATTTGCTTCTTGGTGCCAGCCTTaGGATGCAACTCGTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: NQIIWKDLTASSRSNTFASWCQP*DATRQC Trigger: ACATTGACGAGTTGCATCGCAAGGCTGGCACCAAGA...AGCAAATGTGTTTGATCTGGAAGAGGCTGTCAAGTCCTTCCATATTATTTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CCA 90 bp | AGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGTTCGTCTACAACACAACTaGGAAATGAATCGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPLERPVYLFCVPYFLFVRLQHN*EMNRPG Trigger: TCCGGGCCGATTCATTTCCCAGTTGTGTTGTAGACG...AACAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR CCA 90 bp | GTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTAACTCGTCAATGTTCTaGGTGATGACCACAACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VQDPWKGLYTYFVYHISSNSSMF*VMTTTR Trigger: ACGGGTTGTGGTCATCACCCAGAACATTGACGAGTT...AGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGCGAAACACACATTAACACCCAGTCTGCTGTTAATGCCATTTTGTTCTTTAACTCGTCAATGTTCTaGGTGATGACCACAACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CSETHINTQSAVNAILFFNSSMF*VMTTTR Trigger: ACGGGTTGTGGTCATCACCCAGAACATTGACGAGTT...AAAGAACAAAATGGCATTAACAGCAGACTGGGTGTTAATGTGTGTTTCGCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| 3UTR CAA 72 bp | GGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTaGTGTACCATATTTCCTCTTTGTTCCTACTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GFKTLGKACILI*CTIFPLCSYSL Trigger: GAGAGAGTAGGAACAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
||
| CDS-3UTR TCA 90 bp | GTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTAAAGTCTGCCATATTTaGACTTGGACGAGCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: VQDPWKGLYTYFVYHISSKVCHI*TWTSHG Trigger: ACCATGGCTCGTCCAAGTTCAAATATGGCAGACTTT...AGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGTTCCTACTCGTCTACAACACAACTaGGAAATGAATCGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LERPVYLFCVPYFLFVPTRLQHN*EMNRPG Trigger: TCCGGGCCGATTCATTTCCCAGTTGTGTTGTAGACG...AGTAGGAACAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| 3UTR CAA 72 bp | CTACCTAACCTTAACTTTTCCTCGGGTTCAAGACCCTaGGAAAGGCCTGTATACTTATTTTGTGTACCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LPNLNFSSGSRP*ERPVYLFCVPY Trigger: ATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAAGTTAAGGTTAGGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
||
| CDS-3UTR CAA 90 bp | GCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTTGCGCCAGTCCCGAGCAAAGGCCTGAGGGGTaGCCAGGTCCTGAGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ATRSSGSGMRDLPCASPEQRPEG*PGPEPA Trigger: GGCAGGCTCAGGACCTGGCAACCCCTCAGGCCTTTG...CTCGGGACTGGCGCAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGGGTCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS CCA 90 bp | TGCAACTCGTCAATGTTCTGGGTGATGACCACAACCCGTCTGCCCTaGTCACGAAGCCGGGCTTCACACTGGGCAATGGCCAGGTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CNSSMFWVMTTTRLP*SRSRASHWAMARCP Trigger: CGGGCACCTGGCCATTGCCCAGTGTGAAGCCCGGCTTCGTGACCAGGGCAGACGGGTTGTGGTCATCACCCAGAACATTGACGAGTTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066804.5 ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000221515.2 ENSMUST00000223194.2 |
||
| CDS-3UTR CAA 90 bp | TCGTCAATGTTCTGGGTGATGACCACAACCCGTCTGCCCTGGTCACGAAGCCGGCCGGGGTTGGGTTCTTaGCTCCGCATGACCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSMFWVMTTTRLPWSRSRPGLGS*LRMTSL Trigger: GAGGGAGGTCATGCGGAGCAAAGAACCCAACCCCGG...CCGGCTTCGTGACCAGGGCAGACGGGTTGTGGTCATCACCCAGAACATTGACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220645.2 |
||
| CDS TCA 90 bp | GCTCCGCATGACCTCCCTCCGGTAGTGGTAAAACTCCCACACCTGTaGTGGGTTTCGAGCAAAGGCCTGAGGGGTTGCCAGGTCCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: APHDLPPVVVKLPHL*WVSSKGLRGCQVLS Trigger: GCTCAGGACCTGGCAACCCCTCAGGCCTTTGCTCGAAACCCATCACAGGTGTGGGAGTTTTACCACTACCGGAGGGAGGTCATGCGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066804.5 ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000221515.2 ENSMUST00000223194.2 |
||
| CDS TCA 90 bp | ACTGGGCAATGGCCAGGTGCCCGGGGTTGGGTTCTTTGCTCCGCATaGCCTCCCTCCGGTAGTGGTAAAACTCCCACACCTGTGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TGQWPGARGWVLCSA*PPSGSGKTPTPVMG Trigger: ACCCATCACAGGTGTGGGAGTTTTACCACTACCGGAGGGAGGTCATGCGGAGCAAAGAACCCAACCCCGGGCACCTGGCCATTGCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000066804.5 ENSMUST00000220576.2 ENSMUST00000220645.2 ENSMUST00000221481.2 ENSMUST00000221515.2 ENSMUST00000223194.2 |
||
| CDS-3UTR CAA 90 bp | ACCGCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTTGCGCCAGTCCCGAGGCAGATCTTGCTTaGTGGGGAGGCAGGAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TATRSSGSGMRDLPCASPEADLA*WGGRRL Trigger: AAGCCTCCTGCCTCCCCACAAAGCAAGATCTGCCTC...GGGACTGGCGCAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGGGTCGCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS TCA 90 bp | GCTCCGCATGACCTCCCTCCGGTAGTGGTAAAACTCCCACACCTGTaGTGGGTTTCGAGCAAAGGCCTGAGGGGTTGCCAGGTCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: APHDLPPVVVKLPHL*WVSSKGLRGCQVLN Trigger: GTTCAAGACCTGGCAACCCCTCAGGCCTTTGCTCGAAACCCATCACAGGTGTGGGAGTTTTACCACTACCGGAGGGAGGTCATGCGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220645.2 |
||
| CDS-3UTR CAA 90 bp | GCGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCTTGCGCCAGTCCCGAGTTCTTGGTGCCAGCCTaGCGATGCAACTCGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: ATRSSGSGMRDLPCASPEFLVPA*RCNSSM Trigger: CATTGACGAGTTGCATCGCAAGGCTGGCACCAAGAA...CTCGGGACTGGCGCAAGGAAGATCCCTCATTCCAGAACCAGAACTGCGGGTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS TCA 90 bp | AAAGGCCTGAGGGGTTGCCAGGTCTTGAACTTGGACGAGCCATGGTaGGGCAGATCTTGCTTTGTGGGGAGGCAGGAGGCTTTCGTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: KGLRGCQVLNLDEPW*GRSCFVGRQEAFVY Trigger: GTAGACGAAAGCCTCCTGCCTCCCCACAAAGCAAGATCTGCCTCACCATGGCTCGTCCAAGTTCAAGACCTGGCAACCCCTCAGGCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220645.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGGGCAGATCGGACTCCTATAGTTCTCGGCAACAGTGCCACACGAGGTACAGAGGCAGATCTTGCTTaGTGGGGAGGCAGGAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SWADRTPIVLGNSATRGTEADLA*WGGRRL Trigger: AAGCCTCCTGCCTCCCCACAAAGCAAGATCTGCCTC...TGTACCTCGTGTGGCACTGTTGCCGAGAACTATAGGAGTCCGATCTGCCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220645.2 |
||
| CDS-3UTR CAA 90 bp | GCGATGCAACTCGTCAATGTTCTGGGTGATGACCACAACCCGTCTGCCCTGGTCATGGTGAGGCAGATCTaGCTTTGTGGGGAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AMQLVNVLGDDHNPSALVMVRQI*LCGEAG Trigger: TCCTGCCTCCCCACAAAGCAAGATCTGCCTCACCAT...GACCAGGGCAGACGGGTTGTGGTCATCACCCAGAACATTGACGAGTTGCATCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220645.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGCTTGGGGCTTGAAGGGTGTTTCCATATTTTTCCAGAGTTCAGCTCACCACAAAGGCCTGAGGGGTaGCCAGGTCCTGAGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VCLGLEGCFHIFPEFSSPQRPEG*PGPEPA Trigger: GGCAGGCTCAGGACCTGGCAACCCCTCAGGCCTTTG...TGGTGAGCTGAACTCTGGAAAAATATGGAAACACCCTTCAAGCCCCAAGCAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCTTCAAAGGCCTGAGGGGTaGCCAGGTCCTGAGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRVQLTIHKAIFPVSALLQRPEG*PGPEPA Trigger: GGCAGGCTCAGGACCTGGCAACCCCTCAGGCCTTTG...AAGCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGCTTGGGGCTTGAAGGGTGTTTCCATATTTTTCCAGAGTTCAGCTCACCACCGGGGTTGGGTTCTTaGCTCCGCATGACCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VCLGLEGCFHIFPEFSSPPGLGS*LRMTSL Trigger: GAGGGAGGTCATGCGGAGCAAAGAACCCAACCCCGG...TGGTGAGCTGAACTCTGGAAAAATATGGAAACACCCTTCAAGCCCCAAGCAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCAGAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCCCGGGGTTGGGTTCTTaGCTCCGCATGACCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FPEFSSPSIKPFFPLVPCPGLGS*LRMTSL Trigger: GAGGGAGGTCATGCGGAGCAAAGAACCCAACCCCGG...GCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTCTGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CAA 90 bp | GGAGAAGAATATATTGTGCCAACGGGAAAACCATGGAAACTCCCATGTAGCGAACAAAGGCCTGAGGGGTaGCCAGGTCCTGAGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GEEYIVPTGKPWKLPCSEQRPEG*PGPEPA Trigger: GGCAGGCTCAGGACCTGGCAACCCCTCAGGCCTTTG...TTCGCTACATGGGAGTTTCCATGGTTTTCCCGTTGGCACAATATATTCTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCAGAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCTCGCACCGGGGAAGTTaGTCGACTGGGATTCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FPEFSSPSIKPFFPLVPCSHRGS*STGILA Trigger: CGCCAGAATCCCAGTCGACAAACTTCCCCGGTGCGA...GCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTCTGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CAA 90 bp | GGAGAAGAATATATTGTGCCAACGGGAAAACCATGGAAACTCCCATGTAGCGAACCGGGGTTGGGTTCTTaGCTCCGCATGACCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GEEYIVPTGKPWKLPCSEPGLGS*LRMTSL Trigger: GAGGGAGGTCATGCGGAGCAAAGAACCCAACCCCGG...TTCGCTACATGGGAGTTTCCATGGTTTTCCCGTTGGCACAATATATTCTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGCTTGGGGCTTGAAGGGTGTTTCCATATTTTTCCAGAGTTCAGCTCACCAATGGTGAGGCAGATCTaGCTTTGTGGGGAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VCLGLEGCFHIFPEFSSPMVRQI*LCGEAG Trigger: TCCTGCCTCCCCACAAAGCAAGATCTGCCTCACCAT...TGGTGAGCTGAACTCTGGAAAAATATGGAAACACCCTTCAAGCCCCAAGCAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATCCGGGGTTGGGTTCTTaGCTCCGCATGACCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FPRVQDPWKGLYTYFVYHPGLGS*LRMTSL Trigger: GAGGGAGGTCATGCGGAGCAAAGAACCCAACCCCGG...ATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR CAA 90 bp | CTCACTGGTACTCTCGTTCCCCAGCTGAAAAGTTCTGAATTCATACAGTTGAATCCGGGGTTGGGTTCTTaGCTCCGCATGACCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LTGTLVPQLKSSEFIQLNPGLGS*LRMTSL Trigger: GAGGGAGGTCATGCGGAGCAAAGAACCCAACCCCGG...ATTCAACTGTATGAATTCAGAACTTTTCAGCTGGGGAACGAGAGTACCAGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR CAA 90 bp | CACATTTGCTGCTGGTATTTTGAAACCCATCACGTAACAGATTGTCTGCTTGGGGAGGCAGATCTTGCTTaGTGGGGAGGCAGGAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HICCWYFETHHVTDCLLGEADLA*WGGRRL Trigger: AAGCCTCCTGCCTCCCCACAAAGCAAGATCTGCCTC...CCCAAGCAGACAATCTGTTACGTGATGGGTTTCAAAATACCAGCAGCAAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CAA 90 bp | CCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGTTCCTCAAAGGCCTGAGGGGTaGCCAGGTCCTGAGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLERPVYLFCVPYFLFVPQRPEG*PGPEPA Trigger: GGCAGGCTCAGGACCTGGCAACCCCTCAGGCCTTTG...AGGAACAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGCTTGGGGCTTGAAGGGTGTTTCCATATTTTTCCAGAGTTCAGCTCACCATTCTTGGTGCCAGCCTaGCGATGCAACTCGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: VCLGLEGCFHIFPEFSSPFLVPA*RCNSSM Trigger: CATTGACGAGTTGCATCGCAAGGCTGGCACCAAGAA...TGGTGAGCTGAACTCTGGAAAAATATGGAAACACCCTTCAAGCCCCAAGCAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTCAGCTCACCATCCATAAAGCCATTTTTCCCGTTAGTGCCCTGCTTTAGCTTCTTGGTGCCAGCCTaGCGATGCAACTCGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: EFSSPSIKPFFPLVPCFSFLVPA*RCNSSM Trigger: CATTGACGAGTTGCATCGCAAGGCTGGCACCAAGAA...GCTAAAGCAGGGCACTAACGGGAAAAATGGCTTTATGGATGGTGAGCTGAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CAA 90 bp | CTCACTGGTACTCTCGTTCCCCAGCTGAAAAGTTCTGAATTCATACAGTTGAATTCGCACCGGGGAAGTTaGTCGACTGGGATTCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LTGTLVPQLKSSEFIQLNSHRGS*STGILA Trigger: CGCCAGAATCCCAGTCGACAAACTTCCCCGGTGCGA...ATTCAACTGTATGAATTCAGAACTTTTCAGCTGGGGAACGAGAGTACCAGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGACTTGACAGCCTCTTCCAGATCAAACACATTTGCTGCTGGTATTTTGAATCGCACCGGGGAAGTTaGTCGACTGGGATTCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EGLDSLFQIKHICCWYFESHRGS*STGILA Trigger: CGCCAGAATCCCAGTCGACAAACTTCCCCGGTGCGA...TTCAAAATACCAGCAGCAAATGTGTTTGATCTGGAAGAGGCTGTCAAGTCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS TCA 90 bp | TATGTGCTTGGCGTTCGCAAAACACTTCCGAAAGTCTGCCATATTTaGACTTGGACGAGCCATGGTGAGGCAGATCTTGCTTTGTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: YVLGVRKTLPKVCHI*TWTSHGEADLALWG Trigger: TCCCCACAAAGCAAGATCTGCCTCACCATGGCTCGTCCAAGTTCAAATATGGCAGACTTTCGGAAGTGTTTTGCGAACGCCAAGCACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000066804.5 ENSMUST00000220458.2 ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000221515.2 ENSMUST00000223194.2 |
||
| CDS-3UTR CAA 90 bp | CTCACTGGTACTCTCGTTCCCCAGCTGAAAAGTTCTGAATTCATACAGTTGAATGAGGCAGATCTTGCTTaGTGGGGAGGCAGGAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LTGTLVPQLKSSEFIQLNEADLA*WGGRRL Trigger: AAGCCTCCTGCCTCCCCACAAAGCAAGATCTGCCTC...ATTCAACTGTATGAATTCAGAACTTTTCAGCTGGGGAACGAGAGTACCAGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR CAA 90 bp | CACATTTGCTGCTGGTATTTTGAAACCCATCACGTAACAGATTGTCTGCTTGGGATGGTGAGGCAGATCTaGCTTTGTGGGGAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HICCWYFETHHVTDCLLGMVRQI*LCGEAG Trigger: TCCTGCCTCCCCACAAAGCAAGATCTGCCTCACCAT...CCCAAGCAGACAATCTGTTACGTGATGGGTTTCAAAATACCAGCAGCAAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066804.5 ENSMUST00000223194.2 |
||
| CDS-3UTR CAA 90 bp | CTACCTAACCTTAACTTTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTCTTGGTGCCAGCCTaGCGATGCAACTCGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LPNLNFSSGSRPLERPVYFLVPA*RCNSSM Trigger: CATTGACGAGTTGCATCGCAAGGCTGGCACCAAGAA...GTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAAGTTAAGGTTAGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTAACTTTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTTCGCACCGGGGAAGTTaGTCGACTGGGATTCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TLTFPRVQDPWKGLYTYFSHRGS*STGILA Trigger: CGCCAGAATCCCAGTCGACAAACTTCCCCGGTGCGA...AAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAAGTTAAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATGGTGAGGCAGATCTaGCTTTGTGGGGAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FPRVQDPWKGLYTYFVYHMVRQI*LCGEAG Trigger: TCCTGCCTCCCCACAAAGCAAGATCTGCCTCACCAT...ATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR CAA 90 bp | GGAGAAGAATATATTGTGCCAACGGGAAAACCATGGAAACTCCCATGTAGCGAATTCTTGGTGCCAGCCTaGCGATGCAACTCGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: GEEYIVPTGKPWKLPCSEFLVPA*RCNSSM Trigger: CATTGACGAGTTGCATCGCAAGGCTGGCACCAAGAA...TTCGCTACATGGGAGTTTCCATGGTTTTCCCGTTGGCACAATATATTCTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR CAA 90 bp | TGTAGCGAAACACACATTAACACCCAGTCTGCTGTTAATGCCATTTTGTTCTTTTCGCACCGGGGAAGTTaGTCGACTGGGATTCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CSETHINTQSAVNAILFFSHRGS*STGILA Trigger: CGCCAGAATCCCAGTCGACAAACTTCCCCGGTGCGA...AAAGAACAAAATGGCATTAACAGCAGACTGGGTGTTAATGTGTGTTTCGCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000221515.2 ENSMUST00000222106.2 |
||
| CDS-3UTR CAA 90 bp | TACAGATGCAAGTATAAAGTCTGGAGAAGAATATATTGTGCCAACGGGAAAACCGAGGCAGATCTTGCTTaGTGGGGAGGCAGGAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: YRCKYKVWRRIYCANGKTEADLA*WGGRRL Trigger: AAGCCTCCTGCCTCCCCACAAAGCAAGATCTGCCTC...GGTTTTCCCGTTGGCACAATATATTCTTCTCCAGACTTTATACTTGCATCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTAACTTTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTTATGGTGAGGCAGATCTaGCTTTGTGGGGAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TLTFPRVQDPWKGLYTYFMVRQI*LCGEAG Trigger: TCCTGCCTCCCCACAAAGCAAGATCTGCCTCACCAT...AAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAAGTTAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 |
||
| CDS-3UTR CAA 90 bp | AGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGTTTCGCACCGGGGAAGTTaGTCGACTGGGATTCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RPLERPVYLFCVPYFLFVSHRGS*STGILA Trigger: CGCCAGAATCCCAGTCGACAAACTTCCCCGGTGCGA...AACAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000222106.2 |
||
| CDS-3UTR CAA 90 bp | TACAGATGCAAGTATAAAGTCTGGAGAAGAATATATTGTGCCAACGGGAAAACCATGGTGAGGCAGATCTaGCTTTGTGGGGAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YRCKYKVWRRIYCANGKTMVRQI*LCGEAG Trigger: TCCTGCCTCCCCACAAAGCAAGATCTGCCTCACCAT...GGTTTTCCCGTTGGCACAATATATTCTTCTCCAGACTTTATACTTGCATCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221515.2 |
||
| CDS CCA 72 bp | TGCCCTGGTCACGAAGCCGGGCTTCACACTGGGCAATaGCCAGGTGCCCGGGGTTGGGTTCTTTGCTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: CPGHEAGLHTGQ*PGARGWVLCSA Trigger: TGCGGAGCAAAGAACCCAACCCCGGGCACCTGGCCATTGCCCAGTGTGAAGCCCGGCTTCGTGACCAGGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066804.5 ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000221515.2 ENSMUST00000223194.2 |
||
| CDS GCA 72 bp | TCACGAAGCCGGGCTTCACACTGGGCAATGGCCAGGTaGCCGGGGTTGGGTTCTTTGCTCCGCATGACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRSRASHWAMAR*PGLGSLLRMTS Trigger: GGAGGTCATGCGGAGCAAAGAACCCAACCCCGGGCACCTGGCCATTGCCCAGTGTGAAGCCCGGCTTCGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066804.5 ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000221515.2 ENSMUST00000223194.2 |
||
| CDS GCA 72 bp | CCACACCACGTGAGGTCGCAGCAAGCCTCCGCATCCTaGCTCCTCGCACCGGGGAAGTTTGTCGACTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PHHVRSQQASAS*LLAPGKFVDWD Trigger: ATCCCAGTCGACAAACTTCCCCGGTGCGAGGAGGCAGGATGCGGAGGCTTGCTGCGACCTCACGTGGTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000066804.5 ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000221515.2 ENSMUST00000222106.2 ENSMUST00000223194.2 |
||
| CDS CCA 72 bp | GCATCCTGCCTCCTCGCACCGGGGAAGTTTGTCGACTaGGATTCTGGCGTCTTGAGTCTCTGGCTCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASCLLAPGKFVD*DSGVLSLWLWG Trigger: GCCCCAGAGCCAGAGACTCAAGACGCCAGAATCCCAGTCGACAAACTTCCCCGGTGCGAGGAGGCAGGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000066804.5 ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000221515.2 ENSMUST00000222106.2 ENSMUST00000223194.2 |
||
| CDS TCA 72 bp | TGGCCAGGTGCCCGGGGTTGGGTTCTTTGCTCCGCATaGCCTCCCTCCGGTAGTGGTAAAACTCCCACACCT | + |
|
Preference number: 6 (lower is better) Translates to: WPGARGWVLCSA*PPSGSGKTPTP Trigger: AGGTGTGGGAGTTTTACCACTACCGGAGGGAGGTCATGCGGAGCAAAGAACCCAACCCCGGGCACCTGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000066804.5 ENSMUST00000220576.2 ENSMUST00000220645.2 ENSMUST00000221481.2 ENSMUST00000221515.2 ENSMUST00000223194.2 |
||
| CDS CCA 72 bp | TCAATGTTCTGGGTGATGACCACAACCCGTCTGCCCTaGTCACGAAGCCGGGCTTCACACTGGGCAATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SMFWVMTTTRLP*SRSRASHWAMA Trigger: GGCCATTGCCCAGTGTGAAGCCCGGCTTCGTGACCAGGGCAGACGGGTTGTGGTCATCACCCAGAACATTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066804.5 ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000221515.2 ENSMUST00000223194.2 |
||
| CDS TCA 72 bp | GACCTCCCTCCGGTAGTGGTAAAACTCCCACACCTGTaGTGGGTTTCGAGCAAAGGCCTGAGGGGTTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: DLPPVVVKLPHL*WVSSKGLRGCQ Trigger: CTGGCAACCCCTCAGGCCTTTGCTCGAAACCCATCACAGGTGTGGGAGTTTTACCACTACCGGAGGGAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000066804.5 ENSMUST00000220576.2 ENSMUST00000220645.2 ENSMUST00000221481.2 ENSMUST00000221515.2 ENSMUST00000223194.2 |
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| CDS CAA 72 bp | ACACCTGTGATGGGTTTCGAGCAAAGGCCTGAGGGGTaGCCAGGTCTTGAACTTGGACGAGCCATGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: TPVMGFEQRPEG*PGLELGRAMVR Trigger: CCTCACCATGGCTCGTCCAAGTTCAAGACCTGGCAACCCCTCAGGCCTTTGCTCGAAACCCATCACAGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220645.2 |
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| CDS CAA 90 bp | GGGTTGCCAGGTCTTGAACTTGGACGAGCCATGGTGAGGCAGATCTaGCTTTGTGGGGAGGCAGGAGGCTTTCGTCTACAACACAACTGG | + |
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Preference number: 6 (lower is better) Translates to: GLPGLELGRAMVRQI*LCGEAGGFRLQHNW Trigger: CCAGTTGTGTTGTAGACGAAAGCCTCCTGCCTCCCCACAAAGCAAGATCTGCCTCACCATGGCTCGTCCAAGTTCAAGACCTGGCAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220645.2 |
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| CDS CCA 72 bp | TGTGGGGAGGCAGGAGGCTTTCGTCTACAACACAACTaGGAAATGAATCGGCCCGGAGCAATCAGGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: CGEAGGFRLQHN*EMNRPGAIRRG Trigger: ACCTCTCCTGATTGCTCCGGGCCGATTCATTTCCCAGTTGTGTTGTAGACGAAAGCCTCCTGCCTCCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000066804.5 ENSMUST00000220458.2 ENSMUST00000220576.2 ENSMUST00000220645.2 ENSMUST00000221481.2 ENSMUST00000221515.2 ENSMUST00000223194.2 |
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| CDS CAA 72 bp | GGTCTTGAACTTGGACGAGCCATGGTGAGGCAGATCTaGCTTTGTGGGGAGGCAGGAGGCTTTCGTCTACAA | + |
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Preference number: 6 (lower is better) Translates to: GLELGRAMVRQI*LCGEAGGFRLQ Trigger: TTGTAGACGAAAGCCTCCTGCCTCCCCACAAAGCAAGATCTGCCTCACCATGGCTCGTCCAAGTTCAAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220645.2 |
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| CDS TCA 72 bp | GAAAGTCTGCCATATTTGAACTTGGACGAGCCATGGTaGGGCAGATCTTGCTTTGTGGGGAGGCAGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: ESLPYLNLDEPW*GRSCFVGRQEA Trigger: AGCCTCCTGCCTCCCCACAAAGCAAGATCTGCCTCACCATGGCTCGTCCAAGTTCAAATATGGCAGACTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000066804.5 ENSMUST00000220458.2 ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000221515.2 ENSMUST00000223194.2 |
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| CDS TCA 72 bp | GGCGTTCGCAAAACACTTCCGAAAGTCTGCCATATTTaGACTTGGACGAGCCATGGTGAGGCAGATCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: GVRKTLPKVCHI*TWTSHGEADLA Trigger: AGCAAGATCTGCCTCACCATGGCTCGTCCAAGTTCAAATATGGCAGACTTTCGGAAGTGTTTTGCGAACGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000066804.5 ENSMUST00000220458.2 ENSMUST00000220576.2 ENSMUST00000221481.2 ENSMUST00000221515.2 ENSMUST00000223194.2 |
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