Pregenerated sensors for SIRT4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029524Ensembl transcript IDs: ENSMUST00000112066.2, ENSMUST00000112067.8
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CTTTCCTTAGGGGGCAGCTCTCATTTCTGTAAACAGGAGGGTGCCTaGCCTCTAGACGTGGCTTTGCCACCTCTAGGATTCAGAGTTGGA | + |
Preference number: 1 (lower is better) Translates to: LSLGGSSHFCKQEGA*PLDVALPPLGFRVG Trigger: TCCAACTCTGAATCCTAGAGGTGGCAAAGCCACGTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATGAGAGCTGCCCCCTAAGGAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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3UTR CCA 90 bp | TACCAGAAGGCGACACAGCTACTCCATCAAGAGCAGCTATTTCTTTaGAAAAGTCTTTCCTTAGGGGGCAGCTCTCATTTCTGTAAACAG | + |
Preference number: 1 (lower is better) Translates to: YQKATQLLHQEQLFL*KSLSLGGSSHFCKQ Trigger: CTGTTTACAGAAATGAGAGCTGCCCCCTAAGGAAAGACTTTTCCAAAGAAATAGCTGCTCTTGATGGAGTAGCTGTGTCGCCTTCTGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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3UTR-3UTR TCA 90 bp | TCCTGCCATCAGAAATATCAAAGTGCTTCAGTCAGACACATCCATTTGGAATTAACAGTTGTGGTTTACTaGCTTCTGCCTGGTCCTTCT | + |
Preference number: 2 (lower is better) Translates to: SCHQKYQSASVRHIHLELTVVVY*LLPGPS Trigger: AGAAGGACCAGGCAGAAGTCAGTAAACCACAACTGT...TAATTCCAAATGGATGTGTCTGACTGAAGCACTTTGATATTTCTGATGGCAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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3UTR-3UTR CCA 90 bp | CTATTGCTCCTGCCATCAGAAATATCAAAGTGCTTCAGTCAGACACATCCATTTCCTCATAGACAGTTGTaGTTTACTGACTTCTGCCTG | + |
Preference number: 2 (lower is better) Translates to: LLLLPSEISKCFSQTHPFPHRQL*FTDFCL Trigger: CAGGCAGAAGTCAGTAAACCACAACTGTCTATGAGG...AAATGGATGTGTCTGACTGAAGCACTTTGATATTTCTGATGGCAGGAGCAATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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3UTR-3UTR CCA 90 bp | CTATTGCTCCTGCCATCAGAAATATCAAAGTGCTTCAGTCAGACACATCCATTTGAGCAGCTATTTCTTTaGAAAAGTCTTTCCTTAGGG | + |
Preference number: 2 (lower is better) Translates to: LLLLPSEISKCFSQTHPFEQLFL*KSLSLG Trigger: CCCTAAGGAAAGACTTTTCCAAAGAAATAGCTGCTC...AAATGGATGTGTCTGACTGAAGCACTTTGATATTTCTGATGGCAGGAGCAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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3UTR CCA 72 bp | GGGGGCAGCTCTCATTTCTGTAAACAGGAGGGTGCCTaGCCTCTAGACGTGGCTTTGCCACCTCTAGGATTC | + |
Preference number: 3 (lower is better) Translates to: GGSSHFCKQEGA*PLDVALPPLGF Trigger: GAATCCTAGAGGTGGCAAAGCCACGTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATGAGAGCTGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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3UTR GCA 72 bp | GTTGCCCCTCATAGACAGTTGTGGTTTACTGACTTCTaGCTGGTCCTTCTTCCGGTTACCAGAAGGCGACAC | + |
Preference number: 3 (lower is better) Translates to: VAPHRQLWFTDF*LVLLPVTRRRH Trigger: GTGTCGCCTTCTGGTAACCGGAAGAAGGACCAGGCAGAAGTCAGTAAACCACAACTGTCTATGAGGGGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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3UTR CCA 72 bp | GAGATCTATCTCCACGTTGCCCCTCATAGACAGTTGTaGTTTACTGACTTCTGCCTGGTCCTTCTTCCGGTT | + |
Preference number: 3 (lower is better) Translates to: EIYLHVAPHRQL*FTDFCLVLLPV Trigger: AACCGGAAGAAGGACCAGGCAGAAGTCAGTAAACCACAACTGTCTATGAGGGGCAACGTGGAGATAGATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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3UTR-3UTR CAA 90 bp | ATAGACAGTTGTGGTTTACTGACTTCTGCCTGGTCCTTCTTCCGGTTACCAGAAAGAGCAGCTATTTCTTaGGAAAAGTCTTTCCTTAGG | + |
Preference number: 3 (lower is better) Translates to: IDSCGLLTSAWSFFRLPERAAIS*EKSFLR Trigger: CCTAAGGAAAGACTTTTCCAAAGAAATAGCTGCTCT...TTCTGGTAACCGGAAGAAGGACCAGGCAGAAGTCAGTAAACCACAACTGTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CCA 90 bp | GGTTTACTGACTTCTGCCTGGTCCTTCTTCCGGTTACCAGAAGGCGACACAGCTCGGGCCCAGTACCGCTaGCGGACCGGAGCACTGCGG | + |
Preference number: 4 (lower is better) Translates to: GLLTSAWSFFRLPEGDTARAQYR*RTGALR Trigger: CCGCAGTGCTCCGGTCCGCCAGCGGTACTGGGCCCG...AGCTGTGTCGCCTTCTGGTAACCGGAAGAAGGACCAGGCAGAAGTCAGTAAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR TCA 90 bp | TGCCTGGCCTCTAGACGTGGCTTTGCCACCTCTAGGATTCAGAGTTGGAGCGGCTCACAGCACGGGACCTaGAAGCTCCGGACCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: CLASRRGFATSRIQSWSGSQHGT*KLRTCS Trigger: GGAGCAGGTCCGGAGCTTTCAGGTCCCGTGCTGTGA...GCCGCTCCAACTCTGAATCCTAGAGGTGGCAAAGCCACGTCTAGAGGCCAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR TCA 90 bp | CCTCTAGACGTGGCTTTGCCACCTCTAGGATTCAGAGTTGGAGCGGCATTGGGGTCACAGCACGGGACCTaGAAGCTCCGGACCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: PLDVALPPLGFRVGAALGSQHGT*KLRTCS Trigger: GGAGCAGGTCCGGAGCTTTCAGGTCCCGTGCTGTGA...CCCCAATGCCGCTCCAACTCTGAATCCTAGAGGTGGCAAAGCCACGTCTAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CCA 90 bp | TGCCTGGCCTCTAGACGTGGCTTTGCCACCTCTAGGATTCAGAGTTGGAGCGGCGGTCCAAAGGAGGGCTaGGCGGCACAAATAACCCCG | + |
Preference number: 4 (lower is better) Translates to: CLASRRGFATSRIQSWSGGPKEG*AAQITP Trigger: CGGGGTTATTTGTGCCGCCCAGCCCTCCTTTGGACC...GCCGCTCCAACTCTGAATCCTAGAGGTGGCAAAGCCACGTCTAGAGGCCAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR TCA 90 bp | TCCTTAGGGGGCAGCTCTCATTTCTGTAAACAGGAGGGTGCCTGGCCTCTAGACAGCTCCGTCAGCCGCTaGCTCCCTGCTTTGGAGTGC | + |
Preference number: 4 (lower is better) Translates to: SLGGSSHFCKQEGAWPLDSSVSR*LPALEC Trigger: GCACTCCAAAGCAGGGAGTCAGCGGCTGACGGAGCT...GTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATGAGAGCTGCCCCCTAAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CCA 90 bp | TCTCATTTCTGTAAACAGGAGGGTGCCTGGCCTCTAGACGTGGCTTTGCCACCTCCTCGGCGCTCCAGCTaGGGTTCAGGGCTTGGAAGC | + |
Preference number: 4 (lower is better) Translates to: SHFCKQEGAWPLDVALPPPRRSS*GSGLGS Trigger: GCTTCCAAGCCCTGAACCCCAGCTGGAGCGCCGAGG...AGGTGGCAAAGCCACGTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR GCA 90 bp | CATTTCTGTAAACAGGAGGGTGCCTGGCCTCTAGACGTGGCTTTGCCACCTCTAGCTTGGAAGCGTTCCTaGAGCACCCTGCGGGCAGTC | + |
Preference number: 4 (lower is better) Translates to: HFCKQEGAWPLDVALPPLAWKRS*STLRAV Trigger: GACTGCCCGCAGGGTGCTGCAGGAACGCTTCCAAGC...TAGAGGTGGCAAAGCCACGTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CCA 90 bp | TGCCTGGCCTCTAGACGTGGCTTTGCCACCTCTAGGATTCAGAGTTGGAGCGGCAATCAATGTGCTGGATaGGTCTCCGGTCAGTGCGGG | + |
Preference number: 4 (lower is better) Translates to: CLASRRGFATSRIQSWSGNQCAG*VSGQCG Trigger: CCCGCACTGACCGGAGACCCATCCAGCACATTGATT...GCCGCTCCAACTCTGAATCCTAGAGGTGGCAAAGCCACGTCTAGAGGCCAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CCA 90 bp | GGCAGCTCTCATTTCTGTAAACAGGAGGGTGCCTGGCCTCTAGACGTGGCTTTGCTGGGGTTCAGGGCTTaGAAGCGTTCCTGCAGCACC | + |
Preference number: 4 (lower is better) Translates to: GSSHFCKQEGAWPLDVALLGFRA*KRSCST Trigger: GGTGCTGCAGGAACGCTTCCAAGCCCTGAACCCCAG...CAAAGCCACGTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATGAGAGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR GCA 90 bp | TGTAAACAGGAGGGTGCCTGGCCTCTAGACGTGGCTTTGCCACCTCTAGGATTCACCTGTAGTCTGGGATaGCGGACTCGGTGGAGATCC | + |
Preference number: 4 (lower is better) Translates to: CKQEGAWPLDVALPPLGFTCSLG*RTRWRS Trigger: GGATCTCCACCGAGTCCGGCATCCCAGACTACAGGT...GAATCCTAGAGGTGGCAAAGCCACGTCTAGAGGCCAGGCACCCTCCTGTTTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR GCA 90 bp | GGCAGCTCTCATTTCTGTAAACAGGAGGGTGCCTGGCCTCTAGACGTGGCTTTGGCTCAGAGCCCAGTGTaGTGGGTTGGGTTGGTGAGA | + |
Preference number: 4 (lower is better) Translates to: GSSHFCKQEGAWPLDVALAQSPV*WVGLVR Trigger: TCTCACCAACCCAACCCAGCACACTGGGCTCTGAGC...CAAAGCCACGTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATGAGAGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CCA 90 bp | CATTTCTGTAAACAGGAGGGTGCCTGGCCTCTAGACGTGGCTTTGCCACCTCTACTGGGGTTCAGGGCTTaGAAGCGTTCCTGCAGCACC | + |
Preference number: 4 (lower is better) Translates to: HFCKQEGAWPLDVALPPLLGFRA*KRSCST Trigger: GGTGCTGCAGGAACGCTTCCAAGCCCTGAACCCCAG...TAGAGGTGGCAAAGCCACGTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR TCA 90 bp | CCTCTAGACGTGGCTTTGCCACCTCTAGGATTCAGAGTTGGAGCGGCATTGGGGAAGTCCCACCTTTTCTaGCCTGTAGTCTGGGATGCC | + |
Preference number: 4 (lower is better) Translates to: PLDVALPPLGFRVGAALGKSHLF*PVVWDA Trigger: GGCATCCCAGACTACAGGTCAGAAAAGGTGGGACTT...CCCCAATGCCGCTCCAACTCTGAATCCTAGAGGTGGCAAAGCCACGTCTAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CCA 90 bp | GGCAGCTCTCATTTCTGTAAACAGGAGGGTGCCTGGCCTCTAGACGTGGCTTTGAATCAATGTGCTGGATaGGTCTCCGGTCAGTGCGGG | + |
Preference number: 4 (lower is better) Translates to: GSSHFCKQEGAWPLDVALNQCAG*VSGQCG Trigger: CCCGCACTGACCGGAGACCCATCCAGCACATTGATT...CAAAGCCACGTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATGAGAGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR TCA 90 bp | TCCTTAGGGGGCAGCTCTCATTTCTGTAAACAGGAGGGTGCCTGGCCTCTAGACAAGTCCCACCTTTTCTaGCCTGTAGTCTGGGATGCC | + |
Preference number: 4 (lower is better) Translates to: SLGGSSHFCKQEGAWPLDKSHLF*PVVWDA Trigger: GGCATCCCAGACTACAGGTCAGAAAAGGTGGGACTT...GTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATGAGAGCTGCCCCCTAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CCA 90 bp | TCTCATTTCTGTAAACAGGAGGGTGCCTGGCCTCTAGACGTGGCTTTGCCACCTGCTGACTCCCTGCTTTaGAGTGCAAAGCGTCCACGT | + |
Preference number: 4 (lower is better) Translates to: SHFCKQEGAWPLDVALPPADSLL*SAKRPR Trigger: ACGTGGACGCTTTGCACTCCAAAGCAGGGAGTCAGC...AGGTGGCAAAGCCACGTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CCA 90 bp | CCTCTAGACGTGGCTTTGCCACCTCTAGGATTCAGAGTTGGAGCGGCATTGGGGAAAGTCAACCTTGTCTaGGTTCACCGTGTCCCCAAA | + |
Preference number: 4 (lower is better) Translates to: PLDVALPPLGFRVGAALGKVNLV*VHRVPK Trigger: TTTGGGGACACGGTGAACCCAGACAAGGTTGACTTT...CCCCAATGCCGCTCCAACTCTGAATCCTAGAGGTGGCAAAGCCACGTCTAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR TCA 90 bp | CCTCTAGACGTGGCTTTGCCACCTCTAGGATTCAGAGTTGGAGCGGCATTGGGGAGCGCTGTAACTCTTTaGTCTTTTCAGGGTCCAAAG | + |
Preference number: 4 (lower is better) Translates to: PLDVALPPLGFRVGAALGSAVTL*SFQGPK Trigger: CTTTGGACCCTGAAAAGATCAAAGAGTTACAGCGCT...CCCCAATGCCGCTCCAACTCTGAATCCTAGAGGTGGCAAAGCCACGTCTAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR TCA 90 bp | CACGTTGCCCCTCATAGACAGTTGTGGTTTACTGACTTCTGCCTGGTCCTTCTTAAAGCGTCCACGTTCTaGGTCACCAACCAGTGCAGC | + |
Preference number: 4 (lower is better) Translates to: HVAPHRQLWFTDFCLVLLKASTF*VTNQCS Trigger: GCTGCACTGGTTGGTGACTCAGAACGTGGACGCTTT...AAGAAGGACCAGGCAGAAGTCAGTAAACCACAACTGTCTATGAGGGGCAACGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR GCA 90 bp | TCCTTAGGGGGCAGCTCTCATTTCTGTAAACAGGAGGGTGCCTGGCCTCTAGACTCTTTCACACGCCGGTaGACAAAGTCAACCTTGTCT | + |
Preference number: 4 (lower is better) Translates to: SLGGSSHFCKQEGAWPLDSFTRR*TKSTLS Trigger: AGACAAGGTTGACTTTGTGCACCGGCGTGTGAAAGA...GTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATGAGAGCTGCCCCCTAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR GCA 90 bp | TCTCATTTCTGTAAACAGGAGGGTGCCTGGCCTCTAGACGTGGCTTTGCCACCTCTTTGGACATCAGAGTaGTGTCTCCGCGGGTCTATT | + |
Preference number: 4 (lower is better) Translates to: SHFCKQEGAWPLDVALPPLWTSE*CLRGSI Trigger: AATAGACCCGCGGAGACAGCACTCTGATGTCCAAAG...AGGTGGCAAAGCCACGTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR GCA 90 bp | ATAGACAGTTGTGGTTTACTGACTTCTGCCTGGTCCTTCTTCCGGTTACCAGAAGGCGGACCGGAGCACTaGGGACGAAATCAATGTGCT | + |
Preference number: 4 (lower is better) Translates to: IDSCGLLTSAWSFFRLPEGGPEH*GRNQCA Trigger: AGCACATTGATTTCGTCCGCAGTGCTCCGGTCCGCC...TTCTGGTAACCGGAAGAAGGACCAGGCAGAAGTCAGTAAACCACAACTGTCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR GCA 90 bp | TTGCTCCTGCCATCAGAAATATCAAAGTGCTTCAGTCAGACACATCCATTTGGAGCTTGGAAGCGTTCCTaGAGCACCCTGCGGGCAGTC | + |
Preference number: 4 (lower is better) Translates to: LLLPSEISKCFSQTHPFGAWKRS*STLRAV Trigger: GACTGCCCGCAGGGTGCTGCAGGAACGCTTCCAAGC...TCCAAATGGATGTGTCTGACTGAAGCACTTTGATATTTCTGATGGCAGGAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR GCA 90 bp | CATTTCTGTAAACAGGAGGGTGCCTGGCCTCTAGACGTGGCTTTGCCACCTCTATCTTTCACACGCCGGTaGACAAAGTCAACCTTGTCT | + |
Preference number: 4 (lower is better) Translates to: HFCKQEGAWPLDVALPPLSFTRR*TKSTLS Trigger: AGACAAGGTTGACTTTGTGCACCGGCGTGTGAAAGA...TAGAGGTGGCAAAGCCACGTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CCA 90 bp | CTATTGCTCCTGCCATCAGAAATATCAAAGTGCTTCAGTCAGACACATCCATTTCCTCGGCGCTCCAGCTaGGGTTCAGGGCTTGGAAGC | + |
Preference number: 4 (lower is better) Translates to: LLLLPSEISKCFSQTHPFPRRSS*GSGLGS Trigger: GCTTCCAAGCCCTGAACCCCAGCTGGAGCGCCGAGG...AAATGGATGTGTCTGACTGAAGCACTTTGATATTTCTGATGGCAGGAGCAATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR TCA 90 bp | GGTTTACTGACTTCTGCCTGGTCCTTCTTCCGGTTACCAGAAGGCGACACAGCTAGCGCTGTAACTCTTTaGTCTTTTCAGGGTCCAAAG | + |
Preference number: 4 (lower is better) Translates to: GLLTSAWSFFRLPEGDTASAVTL*SFQGPK Trigger: CTTTGGACCCTGAAAAGATCAAAGAGTTACAGCGCT...AGCTGTGTCGCCTTCTGGTAACCGGAAGAAGGACCAGGCAGAAGTCAGTAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR TCA 90 bp | CTCCTGCCATCAGAAATATCAAAGTGCTTCAGTCAGACACATCCATTTGGAATTAGCTCCGTCAGCCGCTaGCTCCCTGCTTTGGAGTGC | + |
Preference number: 4 (lower is better) Translates to: LLPSEISKCFSQTHPFGISSVSR*LPALEC Trigger: GCACTCCAAAGCAGGGAGTCAGCGGCTGACGGAGCT...AATTCCAAATGGATGTGTCTGACTGAAGCACTTTGATATTTCTGATGGCAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CCA 90 bp | TTGCTCCTGCCATCAGAAATATCAAAGTGCTTCAGTCAGACACATCCATTTGGAGGTCCAAAGGAGGGCTaGGCGGCACAAATAACCCCG | + |
Preference number: 4 (lower is better) Translates to: LLLPSEISKCFSQTHPFGGPKEG*AAQITP Trigger: CGGGGTTATTTGTGCCGCCCAGCCCTCCTTTGGACC...TCCAAATGGATGTGTCTGACTGAAGCACTTTGATATTTCTGATGGCAGGAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CCA 90 bp | ATAGACAGTTGTGGTTTACTGACTTCTGCCTGGTCCTTCTTCCGGTTACCAGAAGCTGACTCCCTGCTTTaGAGTGCAAAGCGTCCACGT | + |
Preference number: 4 (lower is better) Translates to: IDSCGLLTSAWSFFRLPEADSLL*SAKRPR Trigger: ACGTGGACGCTTTGCACTCCAAAGCAGGGAGTCAGC...TTCTGGTAACCGGAAGAAGGACCAGGCAGAAGTCAGTAAACCACAACTGTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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3UTR CAA 72 bp | AGTGAGATCTATCTCCACGTTGCCCCTCATAGACAGTaGTGGTTTACTGACTTCTGCCTGGTCCTTCTTCCG | + |
Preference number: 4 (lower is better) Translates to: SEIYLHVAPHRQ*WFTDFCLVLLP Trigger: CGGAAGAAGGACCAGGCAGAAGTCAGTAAACCACAACTGTCTATGAGGGGCAACGTGGAGATAGATCTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR GCA 90 bp | GCGACACAGCTACTCCATCAAGAGCAGCTATTTCTTTGGAAAAGTCTTTCCTTAACCTGTAGTCTGGGATaGCGGACTCGGTGGAGATCC | + |
Preference number: 4 (lower is better) Translates to: ATQLLHQEQLFLWKSLSLTCSLG*RTRWRS Trigger: GGATCTCCACCGAGTCCGGCATCCCAGACTACAGGT...TAAGGAAAGACTTTTCCAAAGAAATAGCTGCTCTTGATGGAGTAGCTGTGTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR GCA 90 bp | GCGACACAGCTACTCCATCAAGAGCAGCTATTTCTTTGGAAAAGTCTTTCCTTAGGCGGACCGGAGCACTaGGGACGAAATCAATGTGCT | + |
Preference number: 4 (lower is better) Translates to: ATQLLHQEQLFLWKSLSLGGPEH*GRNQCA Trigger: AGCACATTGATTTCGTCCGCAGTGCTCCGGTCCGCC...TAAGGAAAGACTTTTCCAAAGAAATAGCTGCTCTTGATGGAGTAGCTGTGTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR GCA 90 bp | CAAGAGCAGCTATTTCTTTGGAAAAGTCTTTCCTTAGGGGGCAGCTCTCATTTCACAGGACTCTGTGCATaGATCCGTGGAGCTCCGTCA | + |
Preference number: 4 (lower is better) Translates to: QEQLFLWKSLSLGGSSHFTGLCA*IRGAPS Trigger: TGACGGAGCTCCACGGATGCATGCACAGAGTCCTGT...GAAATGAGAGCTGCCCCCTAAGGAAAGACTTTTCCAAAGAAATAGCTGCTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CCA 90 bp | ATAGACAGTTGTGGTTTACTGACTTCTGCCTGGTCCTTCTTCCGGTTACCAGAAATTCAGAATGGCTATTaGGAGCTTTTGCTCGCGGGC | + |
Preference number: 4 (lower is better) Translates to: IDSCGLLTSAWSFFRLPEIQNGY*ELLLAG Trigger: GCCCGCGAGCAAAAGCTCCCAATAGCCATTCTGAAT...TTCTGGTAACCGGAAGAAGGACCAGGCAGAAGTCAGTAAACCACAACTGTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR GCA 90 bp | CTCCTGCCATCAGAAATATCAAAGTGCTTCAGTCAGACACATCCATTTGGAATTACAGGACTCTGTGCATaGATCCGTGGAGCTCCGTCA | + |
Preference number: 4 (lower is better) Translates to: LLPSEISKCFSQTHPFGITGLCA*IRGAPS Trigger: TGACGGAGCTCCACGGATGCATGCACAGAGTCCTGT...AATTCCAAATGGATGTGTCTGACTGAAGCACTTTGATATTTCTGATGGCAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR GCA 90 bp | CTATTGCTCCTGCCATCAGAAATATCAAAGTGCTTCAGTCAGACACATCCATTTCTTTGGACATCAGAGTaGTGTCTCCGCGGGTCTATT | + |
Preference number: 4 (lower is better) Translates to: LLLLPSEISKCFSQTHPFLWTSE*CLRGSI Trigger: AATAGACCCGCGGAGACAGCACTCTGATGTCCAAAG...AAATGGATGTGTCTGACTGAAGCACTTTGATATTTCTGATGGCAGGAGCAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CCA 90 bp | CAAGAGCAGCTATTTCTTTGGAAAAGTCTTTCCTTAGGGGGCAGCTCTCATTTCGGCCGATATTCAGAATaGCTATTGGGAGCTTTTGCT | + |
Preference number: 4 (lower is better) Translates to: QEQLFLWKSLSLGGSSHFGRYSE*LLGAFA Trigger: AGCAAAAGCTCCCAATAGCCATTCTGAATATCGGCC...GAAATGAGAGCTGCCCCCTAAGGAAAGACTTTTCCAAAGAAATAGCTGCTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CCA 90 bp | CTCCTGCCATCAGAAATATCAAAGTGCTTCAGTCAGACACATCCATTTGGAATTAAAGTCAACCTTGTCTaGGTTCACCGTGTCCCCAAA | + |
Preference number: 4 (lower is better) Translates to: LLPSEISKCFSQTHPFGIKVNLV*VHRVPK Trigger: TTTGGGGACACGGTGAACCCAGACAAGGTTGACTTT...AATTCCAAATGGATGTGTCTGACTGAAGCACTTTGATATTTCTGATGGCAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CCA 90 bp | CTATTGCTCCTGCCATCAGAAATATCAAAGTGCTTCAGTCAGACACATCCATTTGGCCGATATTCAGAATaGCTATTGGGAGCTTTTGCT | + |
Preference number: 4 (lower is better) Translates to: LLLLPSEISKCFSQTHPFGRYSE*LLGAFA Trigger: AGCAAAAGCTCCCAATAGCCATTCTGAATATCGGCC...AAATGGATGTGTCTGACTGAAGCACTTTGATATTTCTGATGGCAGGAGCAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CCA 90 bp | GGAGCCACGCCCTGCGCCTCGGCGCTCCAGCTGGGGTTCAGGGCTTaGAAGCGTTCCTGCAGCACCCTGCGGGCAGTCTGCTCCCCACAG | + |
Preference number: 5 (lower is better) Translates to: GATPCASALQLGFRA*KRSCSTLRAVCSPQ Trigger: CTGTGGGGAGCAGACTGCCCGCAGGGTGCTGCAGGAACGCTTCCAAGCCCTGAACCCCAGCTGGAGCGCCGAGGCGCAGGGCGTGGCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 90 bp | TGCGCCTCGGCGCTCCAGCTGGGGTTCAGGGCTTGGAAGCGTTCCTaGAGCACCCTGCGGGCAGTCTGCTCCCCACAGTTCAGGCACAGG | + |
Preference number: 5 (lower is better) Translates to: CASALQLGFRAWKRS*STLRAVCSPQFRHR Trigger: CCTGTGCCTGAACTGTGGGGAGCAGACTGCCCGCAGGGTGCTGCAGGAACGCTTCCAAGCCCTGAACCCCAGCTGGAGCGCCGAGGCGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS TCA 90 bp | CTGGATGGGTCTCCGGTCAGTGCGGGCGTAAAGTCCCACCTTTTCTaGCCTGTAGTCTGGGATGCCGGACTCGGTGGAGATCCCCGCGCC | + |
Preference number: 5 (lower is better) Translates to: LDGSPVSAGVKSHLF*PVVWDAGLGGDPRA Trigger: GGCGCGGGGATCTCCACCGAGTCCGGCATCCCAGACTACAGGTCAGAAAAGGTGGGACTTTACGCCCGCACTGACCGGAGACCCATCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 90 bp | AGCCCACAAAGTTTCGGGCCCAGTACCGCTGGCGGACCGGAGCACTaGGGACGAAATCAATGTGCTGGATGGGTCTCCGGTCAGTGCGGG | + |
Preference number: 5 (lower is better) Translates to: SPQSFGPSTAGGPEH*GRNQCAGWVSGQCG Trigger: CCCGCACTGACCGGAGACCCATCCAGCACATTGATTTCGTCCGCAGTGCTCCGGTCCGCCAGCGGTACTGGGCCCGAAACTTTGTGGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 90 bp | GGGTTCAGGGCTTGGAAGCGTTCCTGCAGCACCCTGCGGGCAGTCTaGTCCCCACAGTTCAGGCACAGGACTCTGTGCATGCATCCGTGG | + |
Preference number: 5 (lower is better) Translates to: GFRAWKRSCSTLRAV*SPQFRHRTLCMHPW Trigger: CCACGGATGCATGCACAGAGTCCTGTGCCTGAACTGTGGGGAGCAGACTGCCCGCAGGGTGCTGCAGGAACGCTTCCAAGCCCTGAACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 90 bp | TGCGGGCAGTCTGCTCCCCACAGTTCAGGCACAGGACTCTGTGCATaGATCCGTGGAGCTCCGTCAGCCGCTGACTCCCTGCTTTGGAGT | + |
Preference number: 5 (lower is better) Translates to: CGQSAPHSSGTGLCA*IRGAPSAADSLLWS Trigger: ACTCCAAAGCAGGGAGTCAGCGGCTGACGGAGCTCCACGGATGCATGCACAGAGTCCTGTGCCTGAACTGTGGGGAGCAGACTGCCCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CCA 90 bp | ACCGCTGGCGGACCGGAGCACTGCGGACGAAATCAATGTGCTGGATaGGTCTCCGGTCAGTGCGGGCGTAAAGTCCCACCTTTTCTGACC | + |
Preference number: 5 (lower is better) Translates to: TAGGPEHCGRNQCAG*VSGQCGRKVPPFLT Trigger: GGTCAGAAAAGGTGGGACTTTACGCCCGCACTGACCGGAGACCCATCCAGCACATTGATTTCGTCCGCAGTGCTCCGGTCCGCCAGCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 90 bp | CAGTGCGGGCGTAAAGTCCCACCTTTTCTGACCTGTAGTCTGGGATaGCGGACTCGGTGGAGATCCCCGCGCCTGTCATCACGAGGAGTT | + |
Preference number: 5 (lower is better) Translates to: QCGRKVPPFLTCSLG*RTRWRSPRLSSRGV Trigger: AACTCCTCGTGATGACAGGCGCGGGGATCTCCACCGAGTCCGGCATCCCAGACTACAGGTCAGAAAAGGTGGGACTTTACGCCCGCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 90 bp | CCAGTGCAGCTTCCCCAGTCTCTCCCAGTTGCTCAGAGCCCAGTGTaGTGGGTTGGGTTGGTGAGAGGAGAATTGAGGCCAGCCCACAAA | + |
Preference number: 5 (lower is better) Translates to: PVQLPQSLPVAQSPV*WVGLVRGELRPAHK Trigger: TTTGTGGGCTGGCCTCAATTCTCCTCTCACCAACCCAACCCAGCACACTGGGCTCTGAGCAACTGGGAGAGACTGGGGAAGCTGCACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 90 bp | GACTCTGTGCATGCATCCGTGGAGCTCCGTCAGCCGCTGACTCCCTaGTTTGGAGTGCAAAGCGTCCACGTTCTGAGTCACCAACCAGTG | + |
Preference number: 5 (lower is better) Translates to: DSVHASVELRQPLTP*FGVQSVHVLSHQPV Trigger: CACTGGTTGGTGACTCAGAACGTGGACGCTTTGCACTCCAAAGCAGGGAGTCAGCGGCTGACGGAGCTCCACGGATGCATGCACAGAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CCA 90 bp | GCTTCCCCAGTCTCTCCCAGTTGCTCAGAGCCCAGTGTGCTGGGTTaGGTTGGTGAGAGGAGAATTGAGGCCAGCCCACAAAGTTTCGGG | + |
Preference number: 5 (lower is better) Translates to: ASPVSPSCSEPSVLG*VGERRIEASPQSFG Trigger: CCCGAAACTTTGTGGGCTGGCCTCAATTCTCCTCTCACCAACCCAACCCAGCACACTGGGCTCTGAGCAACTGGGAGAGACTGGGGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CCA 90 bp | TGTGCATGCATCCGTGGAGCTCCGTCAGCCGCTGACTCCCTGCTTTaGAGTGCAAAGCGTCCACGTTCTGAGTCACCAACCAGTGCAGCT | + |
Preference number: 5 (lower is better) Translates to: CACIRGAPSAADSLL*SAKRPRSESPTSAA Trigger: AGCTGCACTGGTTGGTGACTCAGAACGTGGACGCTTTGCACTCCAAAGCAGGGAGTCAGCGGCTGACGGAGCTCCACGGATGCATGCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CAA 90 bp | TCCTTAGGGGGCAGCTCTCATTTCTGTAAACAGGAGGGTGCCTGGCCTCTAGACGCTGGGGTTCAGGGCTaGGAAGCGTTCCTGCAGCAC | + |
Preference number: 5 (lower is better) Translates to: SLGGSSHFCKQEGAWPLDAGVQG*EAFLQH Trigger: GTGCTGCAGGAACGCTTCCAAGCCCTGAACCCCAGC...GTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATGAGAGCTGCCCCCTAAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 90 bp | GAGCACTGCGGACGAAATCAATGTGCTGGATGGGTCTCCGGTCAGTaGGGGCGTAAAGTCCCACCTTTTCTGACCTGTAGTCTGGGATGC | + |
Preference number: 5 (lower is better) Translates to: EHCGRNQCAGWVSGQ*GRKVPPFLTCSLGC Trigger: GCATCCCAGACTACAGGTCAGAAAAGGTGGGACTTTACGCCCGCACTGACCGGAGACCCATCCAGCACATTGATTTCGTCCGCAGTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CCA 90 bp | AAAGTCCCACCTTTTCTGACCTGTAGTCTGGGATGCCGGACTCGGTaGAGATCCCCGCGCCTGTCATCACGAGGAGTTTCTTGGAAAGGC | + |
Preference number: 5 (lower is better) Translates to: KVPPFLTCSLGCRTR*RSPRLSSRGVSWKG Trigger: GCCTTTCCAAGAAACTCCTCGTGATGACAGGCGCGGGGATCTCCACCGAGTCCGGCATCCCAGACTACAGGTCAGAAAAGGTGGGACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CCA 90 bp | GGAGTCCGCCTCTTTCACACGCCGGTGCACAAAGTCAACCTTGTCTaGGTTCACCGTGTCCCCAAAGAAAACGACGTCCGGTTTCAGAGG | + |
Preference number: 5 (lower is better) Translates to: GVRLFHTPVHKVNLV*VHRVPKENDVRFQR Trigger: CCTCTGAAACCGGACGTCGTTTTCTTTGGGGACACGGTGAACCCAGACAAGGTTGACTTTGTGCACCGGCGTGTGAAAGAGGCGGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 90 bp | GATGATCCCACCACCAGTAGGGAGTCCGCCTCTTTCACACGCCGGTaGACAAAGTCAACCTTGTCTGGGTTCACCGTGTCCCCAAAGAAA | + |
Preference number: 5 (lower is better) Translates to: DDPTTSRESASFTRR*TKSTLSGFTVSPKK Trigger: TTTCTTTGGGGACACGGTGAACCCAGACAAGGTTGACTTTGTGCACCGGCGTGTGAAAGAGGCGGACTCCCTACTGGTGGTGGGATCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CCA 90 bp | AGCCAAATCGTCAGACCGGGTGGGGCCGATATTCAGAATGGCTATTaGGAGCTTTTGCTCGCGGGCGGTGAGGATGAACCTGTAACCAGA | + |
Preference number: 5 (lower is better) Translates to: SQIVRPGGADIQNGY*ELLLAGGEDEPVTR Trigger: TCTGGTTACAGGTTCATCCTCACCGCCCGCGAGCAAAAGCTCCCAATAGCCATTCTGAATATCGGCCCCACCCGGTCTGACGATTTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 90 bp | GCGGAACTCAGAGGAAAGTTCATTTCCAGCCTTTGGACATCAGAGTaGTGTCTCCGCGGGTCTATTAAAGGCAGCAACTCTCCACAGCGG | + |
Preference number: 5 (lower is better) Translates to: AELRGKFISSLWTSE*CLRGSIKGSNSPQR Trigger: CCGCTGTGGAGAGTTGCTGCCTTTAATAGACCCGCGGAGACAGCACTCTGATGTCCAAAGGCTGGAAATGAACTTTCCTCTGAGTTCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CAA 90 bp | CATTTCTGTAAACAGGAGGGTGCCTGGCCTCTAGACGTGGCTTTGCCACCTCTATTGGTGAGAGGAGAATaGAGGCCAGCCCACAAAGTT | + |
Preference number: 5 (lower is better) Translates to: HFCKQEGAWPLDVALPPLLVRGE*RPAHKV Trigger: AACTTTGTGGGCTGGCCTCAATTCTCCTCTCACCAA...TAGAGGTGGCAAAGCCACGTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CAA 90 bp | TGTAAACAGGAGGGTGCCTGGCCTCTAGACGTGGCTTTGCCACCTCTAGGATTCGTTCATTTCCAGCCTTaGGACATCAGAGTGCTGTCT | + |
Preference number: 5 (lower is better) Translates to: CKQEGAWPLDVALPPLGFVHFQP*DIRVLS Trigger: AGACAGCACTCTGATGTCCAAAGGCTGGAAATGAAC...GAATCCTAGAGGTGGCAAAGCCACGTCTAGAGGCCAGGCACCCTCCTGTTTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CAA 90 bp | TCTCATTTCTGTAAACAGGAGGGTGCCTGGCCTCTAGACGTGGCTTTGCCACCTGTTCATTTCCAGCCTTaGGACATCAGAGTGCTGTCT | + |
Preference number: 5 (lower is better) Translates to: SHFCKQEGAWPLDVALPPVHFQP*DIRVLS Trigger: AGACAGCACTCTGATGTCCAAAGGCTGGAAATGAAC...AGGTGGCAAAGCCACGTCTAGAGGCCAGGCACCCTCCTGTTTACAGAAATGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CAA 90 bp | ATAGACAGTTGTGGTTTACTGACTTCTGCCTGGTCCTTCTTCCGGTTACCAGAAGTGTGCTGGGTTGGGTaGGTGAGAGGAGAATTGAGG | + |
Preference number: 5 (lower is better) Translates to: IDSCGLLTSAWSFFRLPEVCWVG*VRGELR Trigger: CCTCAATTCTCCTCTCACCAACCCAACCCAGCACAC...TTCTGGTAACCGGAAGAAGGACCAGGCAGAAGTCAGTAAACCACAACTGTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CAA 90 bp | TTGCTCCTGCCATCAGAAATATCAAAGTGCTTCAGTCAGACACATCCATTTGGACCCAGTCTCTCCCAGTaGCTCAGAGCCCAGTGTGCT | + |
Preference number: 5 (lower is better) Translates to: LLLPSEISKCFSQTHPFGPSLSQ*LRAQCA Trigger: AGCACACTGGGCTCTGAGCAACTGGGAGAGACTGGG...TCCAAATGGATGTGTCTGACTGAAGCACTTTGATATTTCTGATGGCAGGAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CAA 90 bp | CTATTGCTCCTGCCATCAGAAATATCAAAGTGCTTCAGTCAGACACATCCATTTGCTGGGGTTCAGGGCTaGGAAGCGTTCCTGCAGCAC | + |
Preference number: 5 (lower is better) Translates to: LLLLPSEISKCFSQTHPFAGVQG*EAFLQH Trigger: GTGCTGCAGGAACGCTTCCAAGCCCTGAACCCCAGC...AAATGGATGTGTCTGACTGAAGCACTTTGATATTTCTGATGGCAGGAGCAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CAA 90 bp | GGTTTACTGACTTCTGCCTGGTCCTTCTTCCGGTTACCAGAAGGCGACACAGCTAAGCGCTGTAACTCTTaGATCTTTTCAGGGTCCAAA | + |
Preference number: 5 (lower is better) Translates to: GLLTSAWSFFRLPEGDTAKRCNS*IFSGSK Trigger: TTTGGACCCTGAAAAGATCAAAGAGTTACAGCGCTT...AGCTGTGTCGCCTTCTGGTAACCGGAAGAAGGACCAGGCAGAAGTCAGTAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CAA 90 bp | CTATTGCTCCTGCCATCAGAAATATCAAAGTGCTTCAGTCAGACACATCCATTTCCCAGTCTCTCCCAGTaGCTCAGAGCCCAGTGTGCT | + |
Preference number: 5 (lower is better) Translates to: LLLLPSEISKCFSQTHPFPSLSQ*LRAQCA Trigger: AGCACACTGGGCTCTGAGCAACTGGGAGAGACTGGG...AAATGGATGTGTCTGACTGAAGCACTTTGATATTTCTGATGGCAGGAGCAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CAA 90 bp | CAAGAGCAGCTATTTCTTTGGAAAAGTCTTTCCTTAGGGGGCAGCTCTCATTTCTTGGTGAGAGGAGAATaGAGGCCAGCCCACAAAGTT | + |
Preference number: 5 (lower is better) Translates to: QEQLFLWKSLSLGGSSHFLVRGE*RPAHKV Trigger: AACTTTGTGGGCTGGCCTCAATTCTCCTCTCACCAA...GAAATGAGAGCTGCCCCCTAAGGAAAGACTTTTCCAAAGAAATAGCTGCTCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS-3UTR CAA 90 bp | ATAGACAGTTGTGGTTTACTGACTTCTGCCTGGTCCTTCTTCCGGTTACCAGAAAAGCGCTGTAACTCTTaGATCTTTTCAGGGTCCAAA | + |
Preference number: 5 (lower is better) Translates to: IDSCGLLTSAWSFFRLPEKRCNS*IFSGSK Trigger: TTTGGACCCTGAAAAGATCAAAGAGTTACAGCGCTT...TTCTGGTAACCGGAAGAAGGACCAGGCAGAAGTCAGTAAACCACAACTGTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CAA 90 bp | GGGAGCCACGCCCTGCGCCTCGGCGCTCCAGCTGGGGTTCAGGGCTaGGAAGCGTTCCTGCAGCACCCTGCGGGCAGTCTGCTCCCCACA | + |
Preference number: 6 (lower is better) Translates to: GSHALRLGAPAGVQG*EAFLQHPAGSLLPT Trigger: TGTGGGGAGCAGACTGCCCGCAGGGTGCTGCAGGAACGCTTCCAAGCCCTGAACCCCAGCTGGAGCGCCGAGGCGCAGGGCGTGGCTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CAA 72 bp | GCCCTGCGCCTCGGCGCTCCAGCTGGGGTTCAGGGCTaGGAAGCGTTCCTGCAGCACCCTGCGGGCAGTCTG | + |
Preference number: 6 (lower is better) Translates to: ALRLGAPAGVQG*EAFLQHPAGSL Trigger: CAGACTGCCCGCAGGGTGCTGCAGGAACGCTTCCAAGCCCTGAACCCCAGCTGGAGCGCCGAGGCGCAGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 72 bp | AGTTTCGGGCCCAGTACCGCTGGCGGACCGGAGCACTaGGGACGAAATCAATGTGCTGGATGGGTCTCCGGT | + |
Preference number: 6 (lower is better) Translates to: SFGPSTAGGPEH*GRNQCAGWVSG Trigger: ACCGGAGACCCATCCAGCACATTGATTTCGTCCGCAGTGCTCCGGTCCGCCAGCGGTACTGGGCCCGAAACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 72 bp | GCTTGGAAGCGTTCCTGCAGCACCCTGCGGGCAGTCTaGTCCCCACAGTTCAGGCACAGGACTCTGTGCATG | + |
Preference number: 6 (lower is better) Translates to: AWKRSCSTLRAV*SPQFRHRTLCM Trigger: CATGCACAGAGTCCTGTGCCTGAACTGTGGGGAGCAGACTGCCCGCAGGGTGCTGCAGGAACGCTTCCAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CCA 72 bp | GGACCGGAGCACTGCGGACGAAATCAATGTGCTGGATaGGTCTCCGGTCAGTGCGGGCGTAAAGTCCCACCT | + |
Preference number: 6 (lower is better) Translates to: GPEHCGRNQCAG*VSGQCGRKVPP Trigger: AGGTGGGACTTTACGCCCGCACTGACCGGAGACCCATCCAGCACATTGATTTCGTCCGCAGTGCTCCGGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS TCA 72 bp | ACTCTGTGCATGCATCCGTGGAGCTCCGTCAGCCGCTaGCTCCCTGCTTTGGAGTGCAAAGCGTCCACGTTC | + |
Preference number: 6 (lower is better) Translates to: TLCMHPWSSVSR*LPALECKASTF Trigger: GAACGTGGACGCTTTGCACTCCAAAGCAGGGAGTCAGCGGCTGACGGAGCTCCACGGATGCATGCACAGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 72 bp | CATGCATCCGTGGAGCTCCGTCAGCCGCTGACTCCCTaGTTTGGAGTGCAAAGCGTCCACGTTCTGAGTCAC | + |
Preference number: 6 (lower is better) Translates to: HASVELRQPLTP*FGVQSVHVLSH Trigger: GTGACTCAGAACGTGGACGCTTTGCACTCCAAAGCAGGGAGTCAGCGGCTGACGGAGCTCCACGGATGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CCA 72 bp | ATCCGTGGAGCTCCGTCAGCCGCTGACTCCCTGCTTTaGAGTGCAAAGCGTCCACGTTCTGAGTCACCAACC | + |
Preference number: 6 (lower is better) Translates to: IRGAPSAADSLL*SAKRPRSESPT Trigger: GGTTGGTGACTCAGAACGTGGACGCTTTGCACTCCAAAGCAGGGAGTCAGCGGCTGACGGAGCTCCACGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS TCA 72 bp | TCTCCGGTCAGTGCGGGCGTAAAGTCCCACCTTTTCTaGCCTGTAGTCTGGGATGCCGGACTCGGTGGAGAT | + |
Preference number: 6 (lower is better) Translates to: SPVSAGVKSHLF*PVVWDAGLGGD Trigger: ATCTCCACCGAGTCCGGCATCCCAGACTACAGGTCAGAAAAGGTGGGACTTTACGCCCGCACTGACCGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 72 bp | CGTAAAGTCCCACCTTTTCTGACCTGTAGTCTGGGATaGCGGACTCGGTGGAGATCCCCGCGCCTGTCATCA | + |
Preference number: 6 (lower is better) Translates to: RKVPPFLTCSLG*RTRWRSPRLSS Trigger: TGATGACAGGCGCGGGGATCTCCACCGAGTCCGGCATCCCAGACTACAGGTCAGAAAAGGTGGGACTTTACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 72 bp | ACCACCAGTAGGGAGTCCGCCTCTTTCACACGCCGGTaGACAAAGTCAACCTTGTCTGGGTTCACCGTGTCC | + |
Preference number: 6 (lower is better) Translates to: TTSRESASFTRR*TKSTLSGFTVS Trigger: GGACACGGTGAACCCAGACAAGGTTGACTTTGTGCACCGGCGTGTGAAAGAGGCGGACTCCCTACTGGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CCA 72 bp | CCTTTTCTGACCTGTAGTCTGGGATGCCGGACTCGGTaGAGATCCCCGCGCCTGTCATCACGAGGAGTTTCT | + |
Preference number: 6 (lower is better) Translates to: PFLTCSLGCRTR*RSPRLSSRGVS Trigger: AGAAACTCCTCGTGATGACAGGCGCGGGGATCTCCACCGAGTCCGGCATCCCAGACTACAGGTCAGAAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CAA 90 bp | GTCAGACCGGGTGGGGCCGATATTCAGAATGGCTATTGGGAGCTTTaGCTCGCGGGCGGTGAGGATGAACCTGTAACCAGAGTACACCTG | + |
Preference number: 6 (lower is better) Translates to: VRPGGADIQNGYWEL*LAGGEDEPVTRVHL Trigger: CAGGTGTACTCTGGTTACAGGTTCATCCTCACCGCCCGCGAGCAAAAGCTCCCAATAGCCATTCTGAATATCGGCCCCACCCGGTCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CAA 90 bp | AGTAGGGAGTCCGCCTCTTTCACACGCCGGTGCACAAAGTCAACCTaGTCTGGGTTCACCGTGTCCCCAAAGAAAACGACGTCCGGTTTC | + |
Preference number: 6 (lower is better) Translates to: SRESASFTRRCTKST*SGFTVSPKKTTSGF Trigger: GAAACCGGACGTCGTTTTCTTTGGGGACACGGTGAACCCAGACAAGGTTGACTTTGTGCACCGGCGTGTGAAAGAGGCGGACTCCCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CCA 72 bp | CTCTTTCACACGCCGGTGCACAAAGTCAACCTTGTCTaGGTTCACCGTGTCCCCAAAGAAAACGACGTCCGG | + |
Preference number: 6 (lower is better) Translates to: LFHTPVHKVNLV*VHRVPKENDVR Trigger: CCGGACGTCGTTTTCTTTGGGGACACGGTGAACCCAGACAAGGTTGACTTTGTGCACCGGCGTGTGAAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CAA 72 bp | TCCGCCTCTTTCACACGCCGGTGCACAAAGTCAACCTaGTCTGGGTTCACCGTGTCCCCAAAGAAAACGACG | + |
Preference number: 6 (lower is better) Translates to: SASFTRRCTKST*SGFTVSPKKTT Trigger: CGTCGTTTTCTTTGGGGACACGGTGAACCCAGACAAGGTTGACTTTGTGCACCGGCGTGTGAAAGAGGCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CAA 72 bp | GGTGGGGCCGATATTCAGAATGGCTATTGGGAGCTTTaGCTCGCGGGCGGTGAGGATGAACCTGTAACCAGA | + |
Preference number: 6 (lower is better) Translates to: GGADIQNGYWEL*LAGGEDEPVTR Trigger: TCTGGTTACAGGTTCATCCTCACCGCCCGCGAGCAAAAGCTCCCAATAGCCATTCTGAATATCGGCCCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 72 bp | GGACGAAATCAATGTGCTGGATGGGTCTCCGGTCAGTaGGGGCGTAAAGTCCCACCTTTTCTGACCTGTAGT | + |
Preference number: 6 (lower is better) Translates to: GRNQCAGWVSGQ*GRKVPPFLTCS Trigger: ACTACAGGTCAGAAAAGGTGGGACTTTACGCCCGCACTGACCGGAGACCCATCCAGCACATTGATTTCGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CAA 90 bp | CCGGACTCGGTGGAGATCCCCGCGCCTGTCATCACGAGGAGTTTCTaGGAAAGGCTAATGAAGCGCTGTAACTCTTTGATCTTTTCAGGG | + |
Preference number: 6 (lower is better) Translates to: PDSVEIPAPVITRSF*ERLMKRCNSLIFSG Trigger: CCCTGAAAAGATCAAAGAGTTACAGCGCTTCATTAGCCTTTCCAAGAAACTCCTCGTGATGACAGGCGCGGGGATCTCCACCGAGTCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CAA 72 bp | GTGGAGATCCCCGCGCCTGTCATCACGAGGAGTTTCTaGGAAAGGCTAATGAAGCGCTGTAACTCTTTGATC | + |
Preference number: 6 (lower is better) Translates to: VEIPAPVITRSF*ERLMKRCNSLI Trigger: GATCAAAGAGTTACAGCGCTTCATTAGCCTTTCCAAGAAACTCCTCGTGATGACAGGCGCGGGGATCTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS GCA 72 bp | AGAGGAAAGTTCATTTCCAGCCTTTGGACATCAGAGTaGTGTCTCCGCGGGTCTATTAAAGGCAGCAACTCT | + |
Preference number: 6 (lower is better) Translates to: RGKFISSLWTSE*CLRGSIKGSNS Trigger: AGAGTTGCTGCCTTTAATAGACCCGCGGAGACAGCACTCTGATGTCCAAAGGCTGGAAATGAACTTTCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |
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CDS CAA 90 bp | ATCACGAGGAGTTTCTTGGAAAGGCTAATGAAGCGCTGTAACTCTTaGATCTTTTCAGGGTCCAAAGGAGGGCTGGGCGGCACAAATAAC | + |
Preference number: 6 (lower is better) Translates to: ITRSFLERLMKRCNS*IFSGSKGGLGGTNN Trigger: GTTATTTGTGCCGCCCAGCCCTCCTTTGGACCCTGAAAAGATCAAAGAGTTACAGCGCTTCATTAGCCTTTCCAAGAAACTCCTCGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112066.2 ENSMUST00000112067.8 |