Pregenerated sensors for SIRT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025486Ensembl transcript IDs: ENSMUST00000026559.14, ENSMUST00000106048.10, ENSMUST00000137024.8, ENSMUST00000137710.2, ENSMUST00000147331.9, ENSMUST00000210296.2, ENSMUST00000211179.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGGACAGGGCGCACACATaGAGGGGCCCCAAGGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: KGSLGGPLSRPHVVVWFMDRAHT*RGPKGR Trigger: TCTACCCTTGGGGCCCCTCCATGTGTGCGCCCTGTC...CATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAGAAAGCAGCACCTGCACTACACCTTCAGCAGTGATGAGGTGGACAGGGGACAGGGCGCACACATaGAGGGGCCCCAAGGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: AAESSTCTTPSAVMRWTGDRAHT*RGPKGR Trigger: TCTACCCTTGGGGCCCCTCCATGTGTGCGCCCTGTC...CCCTGTCCACCTCATCACTGCTGAAGGTGTAGTGCAGGTGCTGCTTTCTGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAAGGGTAGACATCCCTGGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACAGCTGTCTTCAGGCATaGAGTCTTGCTGGACATAGG | + |
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Preference number: 2 (lower is better) Translates to: PKGRHPWSAFPKAASEDHSCLQA*SLAGHR Trigger: CCTATGTCCAGCAAGACTTCATGCCTGAAGACAGCT...GTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGACCAGGGATGTCTACCCTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGACATCCCTGGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGGACATAGGATGATCTaGTGTGTGACTTCCCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: VDIPGQPFQRQPRRTTVQGHRMI*CVTSPG Trigger: ACCTGGGGAAGTCACACAGCAGATCATCCTATGTCC...CTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGACCAGGGATGTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| 3UTR-3UTR GCA 90 bp | GTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGGACATAGGATGATCTaGTGTGTGACTTCCCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: VSLSKGSLGGPLSRPHVVGHRMI*CVTSPG Trigger: ACCTGGGGAAGTCACACAGCAGATCATCCTATGTCC...CACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAGCAGCACCTGCACTACACCTTCAGCAGTGATGAGGTGGACAGGGCGCACAAGCTGTCTTCAGGCATaGAGTCTTGCTGGACATAGG | + |
|
Preference number: 2 (lower is better) Translates to: ESSTCTTPSAVMRWTGRTSCLQA*SLAGHR Trigger: CCTATGTCCAGCAAGACTTCATGCCTGAAGACAGCT...TGTGCGCCCTGTCCACCTCATCACTGCTGAAGGTGTAGTGCAGGTGCTGCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGGGACATAGGATGATCTaGTGTGTGACTTCCCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: KGSLGGPLSRPHVVVWFMGHRMI*CVTSPG Trigger: ACCTGGGGAAGTCACACAGCAGATCATCCTATGTCC...CATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| 3UTR CAA 90 bp | TCTTTCCTTCGAGGACTCAGAACGAACGGCCCCACCAAGTCTCGATaGATGAGCAGTCGGGGCACTGATTTCTGTACTGCTTCAGACAAG | + |
|
Preference number: 2 (lower is better) Translates to: SFLRGLRTNGPTKSR*MSSRGTDFCTASDK Trigger: CTTGTCTGAAGCAGTACAGAAATCAGTGCCCCGACTGCTCATCAATCGAGACTTGGTGGGGCCGTTCGTTCTGAGTCCTCGAAGGAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210296.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTGTTGTGACTTCCCCAGGTaGAGAAGCCATAGTCTTATC | + |
|
Preference number: 2 (lower is better) Translates to: QPRRTTVQATCCGLVHVCCDFPR*RSHSLI Trigger: GATAAGACTATGGCTTCTTCACCTGGGGAAGTCACA...ACAAACATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210296.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGCTCCACCTTTCACTGTaGAACTTTGAAAGGGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: PFQRQPRRTTVQATCCGLLHLSL*NFERDF Trigger: AAAATCCCTTTCAAAGTTCCACAGTGAAAGGTGGAG...CAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210296.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGCCACATGTTGTGGTCTGGTTCATGTTTGTAAACGTGTTGGAGCTGTCTAGCTGTCTTCAGGCATaGAGTCTTGCTGGACATAGG | + |
|
Preference number: 2 (lower is better) Translates to: SRPHVVVWFMFVNVLELSSCLQA*SLAGHR Trigger: CCTATGTCCAGCAAGACTTCATGCCTGAAGACAGCT...AGACAGCTCCAACACGTTTACAAACATGAACCAGACCACAACATGTGGCCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| 3UTR CAA 90 bp | GCTTCAGACAAGCTGGCAAAAGGCTCCACCTTTCACTGTGGAACTTaGAAAGGGATTTTAGATTTAAGTGTGAACAAAGCAGCTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: ASDKLAKGSTFHCGT*KGILDLSVNKAAVE Trigger: CTCCACAGCTGCTTTGTTCACACTTAAATCTAAAATCCCTTTCAAAGTTCCACAGTGAAAGGTGGAGCCTTTTGCCAGCTTGTCTGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210296.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAACTTTGAAAGGGATTTTAGATTTAAGTGTGAACAAAGCAGCTGTGGAGCCGGACATAGGATGATCTaGTGTGTGACTTCCCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: WNFERDFRFKCEQSSCGAGHRMI*CVTSPG Trigger: ACCTGGGGAAGTCACACAGCAGATCATCCTATGTCC...GGCTCCACAGCTGCTTTGTTCACACTTAAATCTAAAATCCCTTTCAAAGTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210296.2 |
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| 3UTR CCA 72 bp | GCGCACACATGGAGGGGCCCCAAGGGTAGACATCCCTaGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCAC | + |
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Preference number: 3 (lower is better) Translates to: AHTWRGPKGRHP*SAFPKAASEDH Trigger: GTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGACCAGGGATGTCTACCCTTGGGGCCCCTCCATGTGTGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| 3UTR CCA 72 bp | ACCTTCAGCAGTGATGAGGTGGACAGGGCGCACACATaGAGGGGCCCCAAGGGTAGACATCCCTGGTCAGCC | + |
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Preference number: 3 (lower is better) Translates to: TFSSDEVDRAHT*RGPKGRHPWSA Trigger: GGCTGACCAGGGATGTCTACCCTTGGGGCCCCTCCATGTGTGCGCCCTGTCCACCTCATCACTGCTGAAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| 3UTR CCA 72 bp | AGCAGCACCTGCACTACACCTTCAGCAGTGATGAGGTaGACAGGGCGCACACATGGAGGGGCCCCAAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SSTCTTPSAVMR*TGRTHGGAPRV Trigger: TACCCTTGGGGCCCCTCCATGTGTGCGCCCTGTCCACCTCATCACTGCTGAAGGTGTAGTGCAGGTGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTCCCACCAAGTCTCGATaGATGAGCAGTCGGGGCACT | + |
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Preference number: 3 (lower is better) Translates to: PGQPFQRQPRRTTVQATCPTKSR*MSSRGT Trigger: AGTGCCCCGACTGCTCATCAATCGAGACTTGGTGGG...ACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGACCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210296.2 |
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| 3UTR TCA 72 bp | GTCCACCCCAGGAGGTCCACCAGCCTTTCCACACCATaGACTACATCCCCTAGCTGGACCACATCTTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VHPRRSTSLSTP*TTSPSWTTSFL Trigger: AAGGAAAGATGTGGTCCAGCTAGGGGATGTAGTTCATGGTGTGGAAAGGCTGGTGGACCTCCTGGGGTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210296.2 |
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| 3UTR-3UTR CAA 90 bp | CCCAAGGGTAGACATCCCTGGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACATGTTTGTAAACGTGTaGGAGCTGTCTTCAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: PKGRHPWSAFPKAASEDHMFVNV*ELSSGM Trigger: CATGCCTGAAGACAGCTCCAACACGTTTACAAACAT...GTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGACCAGGGATGTCTACCCTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| 3UTR-3UTR CAA 90 bp | GTAGACATCCCTGGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGATGTTTGTAAACGTGTaGGAGCTGTCTTCAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: VDIPGQPFQRQPRRTTVQMFVNV*ELSSGM Trigger: CATGCCTGAAGACAGCTCCAACACGTTTACAAACAT...CTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGACCAGGGATGTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAGCAGCACCTGCACTACACCTTCAGCAGTGATGAGGTGGACAGGGCGCACAATGTTTGTAAACGTGTaGGAGCTGTCTTCAGGCATG | + |
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Preference number: 3 (lower is better) Translates to: ESSTCTTPSAVMRWTGRTMFVNV*ELSSGM Trigger: CATGCCTGAAGACAGCTCCAACACGTTTACAAACAT...TGTGCGCCCTGTCCACCTCATCACTGCTGAAGGTGTAGTGCAGGTGCTGCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| 3UTR CCA 72 bp | CTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTaGTTCATGTTTGTAAACGTGTTGGAGCTGTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: LGGPLSRPHVVV*FMFVNVLELSS Trigger: TGAAGACAGCTCCAACACGTTTACAAACATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| 3UTR CCA 72 bp | TTCAGACAAGCTGGCAAAAGGCTCCACCTTTCACTGTaGAACTTTGAAAGGGATTTTAGATTTAAGTGTGAA | + |
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Preference number: 3 (lower is better) Translates to: FRQAGKRLHLSL*NFERDFRFKCE Trigger: TTCACACTTAAATCTAAAATCCCTTTCAAAGTTCCACAGTGAAAGGTGGAGCCTTTTGCCAGCTTGTCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210296.2 |
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| CDS-3UTR TCA 90 bp | GGAGGGGCCCCAAGGGTAGACATCCCTGGTCAGCCTTTCCAAAGGCAGCCTCGGGGCTTCAACCAGCTTTaGGGCAGGGATCCCAGATGC | + |
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Preference number: 4 (lower is better) Translates to: GGAPRVDIPGQPFQRQPRGFNQL*GRDPRC Trigger: GCATCTGGGATCCCTGCCTCAAAGCTGGTTGAAGCC...CCGAGGCTGCCTTTGGAAAGGCTGACCAGGGATGTCTACCCTTGGGGCCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS-3UTR TCA 90 bp | CCTAGTGCATCGCCTGCCTGGCGACGGGCGTGCTGTGCTGCCCTCGTGATAACTGGCTTCAACCAGCTTTaGGGCAGGGATCCCAGATGC | + |
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Preference number: 4 (lower is better) Translates to: PSASPAWRRACCAALVITGFNQL*GRDPRC Trigger: GCATCTGGGATCCCTGCCTCAAAGCTGGTTGAAGCC...AGTTATCACGAGGGCAGCACAGCACGCCCGTCGCCAGGCAGGCGATGCACTAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS-3UTR TCA 90 bp | GTGATGAGGTGGACAGGGCGCACACATGGAGGGGCCCCAAGGGTAGACATCCCTGGCTTCAACCAGCTTTaGGGCAGGGATCCCAGATGC | + |
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Preference number: 4 (lower is better) Translates to: VMRWTGRTHGGAPRVDIPGFNQL*GRDPRC Trigger: GCATCTGGGATCCCTGCCTCAAAGCTGGTTGAAGCC...AGGGATGTCTACCCTTGGGGCCCCTCCATGTGTGCGCCCTGTCCACCTCATCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS-3UTR CCA 90 bp | CCTAGTGCATCGCCTGCCTGGCGACGGGCGTGCTGTGCTGCCCTCGTGATAACTCTGCTTCAGACAAGCTaGCAAAAGGCTCCACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PSASPAWRRACCAALVITLLQTS*QKAPPP Trigger: TGGAGGTGGAGCCTTTTGCCAGCTTGTCTGAAGCAG...AGTTATCACGAGGGCAGCACAGCACGCCCGTCGCCAGGCAGGCGATGCACTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 |
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| CDS-3UTR TCA 90 bp | GTGATGAGGTGGACAGGGCGCACACATGGAGGGGCCCCAAGGGTAGACATCCCTTCAGGAAGTAGTGAGTaGCATTGGGCCTGTAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: VMRWTGRTHGGAPRVDIPSGSSE*HWACSA Trigger: GGCACTACAGGCCCAATGTCACTCACTACTTCCTGA...AGGGATGTCTACCCTTGGGGCCCCTCCATGTGTGCGCCCTGTCCACCTCATCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS-3UTR TCA 90 bp | GTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGGCTTCAACCAGCTTTaGGGCAGGGATCCCAGATGC | + |
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Preference number: 4 (lower is better) Translates to: VSLSKGSLGGPLSRPHVVGFNQL*GRDPRC Trigger: GCATCTGGGATCCCTGCCTCAAAGCTGGTTGAAGCC...CACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS-3UTR GCA 90 bp | TCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGGGCAGGGATCCCAGATaGTCTCTCAAGCCCGTCGAT | + |
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Preference number: 4 (lower is better) Translates to: SAFPKAASEDHCPGHMLWGRDPR*SLKPVD Trigger: ATCGACGGGCTTGAGAGAGCATCTGGGATCCCTGCC...CCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS-3UTR GCA 90 bp | CCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGGCAGGGATCCCAGATaGTCTCTCAAGCCCGTCGAT | + |
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Preference number: 4 (lower is better) Translates to: PFQRQPRRTTVQATCCGLGRDPR*SLKPVD Trigger: ATCGACGGGCTTGAGAGAGCATCTGGGATCCCTGCC...CAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS-3UTR TCA 90 bp | CCTGGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTGGGAGGTCCCAAGAATaGGTAGCAGATCTGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: PGQPFQRQPRRTTVQATCGRSQE*VADLPK Trigger: CTTTGGCAGATCTGCTACTCATTCTTGGGACCTCCC...ACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGACCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS-3UTR GCA 90 bp | GCTGCAGAAAGCAGCACCTGCACTACACCTTCAGCAGTGATGAGGTGGACAGGGGGCAGGGATCCCAGATaGTCTCTCAAGCCCGTCGAT | + |
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Preference number: 4 (lower is better) Translates to: AAESSTCTTPSAVMRWTGGRDPR*SLKPVD Trigger: ATCGACGGGCTTGAGAGAGCATCTGGGATCCCTGCC...CCCTGTCCACCTCATCACTGCTGAAGGTGTAGTGCAGGTGCTGCTTTCTGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS-3UTR GCA 90 bp | GCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTGGGCAGGGATCCCAGATaGTCTCTCAAGCCCGTCGAT | + |
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Preference number: 4 (lower is better) Translates to: AASEDHCPGHMLWSGSCLGRDPR*SLKPVD Trigger: ATCGACGGGCTTGAGAGAGCATCTGGGATCCCTGCC...CAAACATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS-3UTR CCA 90 bp | CGCACACATGGAGGGGCCCCAAGGGTAGACATCCCTGGTCAGCCTTTCCAAAGGGCGAAGTCAGCCATATaGAGTAGGAACCTTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RTHGGAPRVDIPGQPFQRAKSAI*SRNLAG Trigger: GCCTGCAAGGTTCCTACTCCATATGGCTGACTTCGC...CCTTTGGAAAGGCTGACCAGGGATGTCTACCCTTGGGGCCCCTCCATGTGTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS-3UTR CCA 90 bp | CGCACACATGGAGGGGCCCCAAGGGTAGACATCCCTGGTCAGCCTTTCCAAAGGCTGCTTCAGACAAGCTaGCAAAAGGCTCCACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RTHGGAPRVDIPGQPFQRLLQTS*QKAPPP Trigger: TGGAGGTGGAGCCTTTTGCCAGCTTGTCTGAAGCAG...CCTTTGGAAAGGCTGACCAGGGATGTCTACCCTTGGGGCCCCTCCATGTGTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 |
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| CDS-3UTR CCA 90 bp | ATCGCCTGCCTGGCGACGGGCGTGCTGTGCTGCCCTCGTGATAACTTAAGGGCCCTGCTTCAGACAAGCTaGCAAAAGGCTCCACAGAAT | + |
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Preference number: 4 (lower is better) Translates to: IACLATGVLCCPRDNLRALLQTS*QKAPQN Trigger: ATTCTGTGGAGCCTTTTGCCAGCTTGTCTGAAGCAG...GGCCCTTAAGTTATCACGAGGGCAGCACAGCACGCCCGTCGCCAGGCAGGCGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211179.2 |
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| CDS-3UTR TCA 90 bp | GTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGGGAGGTCCCAAGAATaGGTAGCAGATCTGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: VSLSKGSLGGPLSRPHVVGRSQE*VADLPK Trigger: CTTTGGCAGATCTGCTACTCATTCTTGGGACCTCCC...CACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS-3UTR TCA 90 bp | CCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGAGCCTTTCCACACCATaGACTACATCCCCTAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PFQRQPRRTTVQATCCGLSLSTP*TTSPSW Trigger: CCAGCTAGGGGATGTAGTTCATGGTGTGGAAAGGCT...CAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000211179.2 |
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| CDS-3UTR GCA 90 bp | CCCAAGGGTAGACATCCCTGGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTTGCCACGTTCCCGCTaGATAAGATCCAGCAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: PKGRHPWSAFPKAASEDHLPRSR*IRSSSS Trigger: AGAACTGCTGGATCTTATGCAGCGGGAACGTGGCAA...GTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGACCAGGGATGTCTACCCTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000211179.2 |
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| CDS-3UTR GCA 90 bp | TCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGCCTCTGCCTCTAAAGTaGTGGTGGCAGTCACCACTA | + |
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Preference number: 4 (lower is better) Translates to: SAFPKAASEDHCPGHMLWPLPLK*WWQSPL Trigger: TAGTGGTGACTGCCACCAGCACTTTAGAGGCAGAGG...CCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211179.2 |
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| CDS-3UTR CCA 90 bp | GTAGACATCCCTGGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCGAAGTCAGCCATATaGAGTAGGAACCTTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VDIPGQPFQRQPRRTTVQAKSAI*SRNLAG Trigger: GCCTGCAAGGTTCCTACTCCATATGGCTGACTTCGC...CTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGACCAGGGATGTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGCTGCCTCTAAAGTGCTaGTGGCAGTCACCACTACCT | + |
|
Preference number: 4 (lower is better) Translates to: VSLSKGSLGGPLSRPHVVLPLKC*WQSPLP Trigger: AGGTAGTGGTGACTGCCACCAGCACTTTAGAGGCAG...CACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211179.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGAAAGCAGCACCTGCACTACACCTTCAGCAGTGATGAGGTGGACAGGGGCTCCTTGGCCAACATaGAAAAGGGCTTGGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AAESSTCTTPSAVMRWTGAPWPT*KRAWGC Trigger: ACAACCCCAAGCCCTTTTTCATGTTGGCCAAGGAGC...CCCTGTCCACCTCATCACTGCTGAAGGTGTAGTGCAGGTGCTGCTTTCTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTGGGAGGTCCCAAGAATaGGTAGCAGATCTGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSLGGPLSRPHVVVWFMFGRSQE*VADLPK Trigger: CTTTGGCAGATCTGCTACTCATTCTTGGGACCTCCC...AAACATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTAGCCTTTCCACACCATaGACTACATCCCCTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPKAASEDHCPGHMLWSGSLSTP*TTSPSW Trigger: CCAGCTAGGGGATGTAGTTCATGGTGTGGAAAGGCT...ACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000211179.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGCAGCACCTGCACTACACCTTCAGCAGTGATGAGGTGGACAGGGCGCACAAGCCTTTCCACACCATaGACTACATCCCCTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESSTCTTPSAVMRWTGRTSLSTP*TTSPSW Trigger: CCAGCTAGGGGATGTAGTTCATGGTGTGGAAAGGCT...TGTGCGCCCTGTCCACCTCATCACTGCTGAAGGTGTAGTGCAGGTGCTGCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000211179.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGAAAGCAGCACCTGCACTACACCTTCAGCAGTGATGAGGTGGACAGGGGCGAAGTCAGCCATATaGAGTAGGAACCTTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AAESSTCTTPSAVMRWTGAKSAI*SRNLAG Trigger: GCCTGCAAGGTTCCTACTCCATATGGCTGACTTCGC...CCCTGTCCACCTCATCACTGCTGAAGGTGTAGTGCAGGTGCTGCTTTCTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTGCGAAGTCAGCCATATaGAGTAGGAACCTTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KAASEDHCPGHMLWSGSCAKSAI*SRNLAG Trigger: GCCTGCAAGGTTCCTACTCCATATGGCTGACTTCGC...ACATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR TCA 90 bp | CGCACACATGGAGGGGCCCCAAGGGTAGACATCCCTGGTCAGCCTTTCCAAAGGAAGGGCTTGGGGTTGTaGAAGAAAAAGCCAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTHGGAPRVDIPGQPFQRKGLGL*KKKPSS Trigger: TGAACTTGGCTTTTTCTTTCACAACCCCAAGCCCTT...CCTTTGGAAAGGCTGACCAGGGATGTCTACCCTTGGGGCCCCTCCATGTGTGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTTGCCACGTTCCCGCTaGATAAGATCCAGCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPKAASEDHCPGHMLWSGLPRSR*IRSSSS Trigger: AGAACTGCTGGATCTTATGCAGCGGGAACGTGGCAA...ACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000211179.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTTTGCCACGTTCCCGCTaGATAAGATCCAGCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSLGGPLSRPHVVVWFMFLPRSR*IRSSSS Trigger: AGAACTGCTGGATCTTATGCAGCGGGAACGTGGCAA...AAACATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000211179.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGAGCCAAGTTCAAAGATaGCTTCAGGGTACGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SAFPKAASEDHCPGHMLWSQVQR*LQGTGC Trigger: ACATCCCGTACCCTGAAGCCATCTTTGAACTTGGCT...CCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTGTTACAAAGGTCCCGTaGGCTTCAACCAGCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSLGGPLSRPHVVVWFMFVTKVP*ASTSFE Trigger: CTCAAAGCTGGTTGAAGCCCACGGGACCTTTGTAAC...AAACATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTAGCCAAGTTCAAAGATaGCTTCAGGGTACGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GSLGGPLSRPHVVVWFMFSQVQR*LQGTGC Trigger: ACATCCCGTACCCTGAAGCCATCTTTGAACTTGGCT...AAACATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGAAAGCAGCACCTGCACTACACCTTCAGCAGTGATGAGGTGGACAGGGAAGGGCTTGGGGTTGTaGAAGAAAAAGCCAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AAESSTCTTPSAVMRWTGKGLGL*KKKPSS Trigger: TGAACTTGGCTTTTTCTTTCACAACCCCAAGCCCTT...CCCTGTCCACCTCATCACTGCTGAAGGTGTAGTGCAGGTGCTGCTTTCTGCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR GCA 90 bp | AGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTGTAAACCTTGCAGGCAGCTaGTCCCCAAAGAACACAATG | + |
|
Preference number: 4 (lower is better) Translates to: SLGGPLSRPHVVVWFMFVNLAGS*SPKNTM Trigger: CATTGTGTTCTTTGGGGAGCAGCTGCCTGCAAGGTT...TACAAACATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTGTAAGGGCTTGGGGTTGTaGAAGAAAAAGCCAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPRRTTVQATCCGLVHVCKGLGL*KKKPSS Trigger: TGAACTTGGCTTTTTCTTTCACAACCCCAAGCCCTT...ACAAACATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR TCA 90 bp | GTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTGTAAACGTGTTGGAGCTGTCTCAGGAAGTAGTGAGTaGCATTGGGCCTGTAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VQATCCGLVHVCKRVGAVSGSSE*HWACSA Trigger: GGCACTACAGGCCCAATGTCACTCACTACTTCCTGA...GACAGCTCCAACACGTTTACAAACATGAACCAGACCACAACATGTGGCCTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR TCA 90 bp | GTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTGTAAACGTGTTGGAGCTGTCGGGAGGTCCCAAGAATaGGTAGCAGATCTGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VQATCCGLVHVCKRVGAVGRSQE*VADLPK Trigger: CTTTGGCAGATCTGCTACTCATTCTTGGGACCTCCC...GACAGCTCCAACACGTTTACAAACATGAACCAGACCACAACATGTGGCCTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR TCA 90 bp | AGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTGTAAACGTGTTTCAGGAAGTAGTGAGTaGCATTGGGCCTGTAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTTVQATCCGLVHVCKRVSGSSE*HWACSA Trigger: GGCACTACAGGCCCAATGTCACTCACTACTTCCTGA...AACACGTTTACAAACATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS-3UTR CCA 90 bp | GCTGCAGAAAGCAGCACCTGCACTACACCTTCAGCAGTGATGAGGTGGACAGGGTGTAAACGAGACATTTaGTTGGTTGGTTGGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AAESSTCTTPSAVMRWTGCKRDI*LVGWLV Trigger: AACCAACCAACCAACCAACCAAATGTCTCGTTTACA...CCCTGTCCACCTCATCACTGCTGAAGGTGTAGTGCAGGTGCTGCTTTCTGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211179.2 |
||
| CDS-3UTR TCA 90 bp | GTCTGGTTCATGTTTGTAAACGTGTTGGAGCTGTCTTCAGGCATGAAGTCTTGCTCAGGAAGTAGTGAGTaGCATTGGGCCTGTAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VWFMFVNVLELSSGMKSCSGSSE*HWACSA Trigger: GGCACTACAGGCCCAATGTCACTCACTACTTCCTGA...GCAAGACTTCATGCCTGAAGACAGCTCCAACACGTTTACAAACATGAACCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGTTCATGTTTGTAAACGTGTTGGAGCTGTCTTCAGGCATGAAGTCTTGGTTACAAAGGTCCCGTaGGCTTCAACCAGCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLVHVCKRVGAVFRHEVLVTKVP*ASTSFE Trigger: CTCAAAGCTGGTTGAAGCCCACGGGACCTTTGTAAC...CAAGACTTCATGCCTGAAGACAGCTCCAACACGTTTACAAACATGAACCAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR CCA 90 bp | TGGTTCATGTTTGTAAACGTGTTGGAGCTGTCTTCAGGCATGAAGTCTTGCTGGAGCCAAGTTCAAAGATaGCTTCAGGGTACGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: WFMFVNVLELSSGMKSCWSQVQR*LQGTGC Trigger: ACATCCCGTACCCTGAAGCCATCTTTGAACTTGGCT...CCAGCAAGACTTCATGCCTGAAGACAGCTCCAACACGTTTACAAACATGAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| 3UTR CAA 72 bp | CCACATGTTGTGGTCTGGTTCATGTTTGTAAACGTGTaGGAGCTGTCTTCAGGCATGAAGTCTTGCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PHVVVWFMFVNV*ELSSGMKSCWT Trigger: TGTCCAGCAAGACTTCATGCCTGAAGACAGCTCCAACACGTTTACAAACATGAACCAGACCACAACATGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGCTCCACCTTTCACTGTGGAACTTTGAAAGGGATTTTAGATTTAAGTGTGAAGGGCTTGGGGTTGTaGAAGAAAAAGCCAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGSTFHCGTLKGILDLSVKGLGL*KKKPSS Trigger: TGAACTTGGCTTTTTCTTTCACAACCCCAAGCCCTT...CACACTTAAATCTAAAATCCCTTTCAAAGTTCCACAGTGAAAGGTGGAGCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000210296.2 |
||
| 3UTR CAA 72 bp | AAGCTGGCAAAAGGCTCCACCTTTCACTGTGGAACTTaGAAAGGGATTTTAGATTTAAGTGTGAACAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLAKGSTFHCGT*KGILDLSVNKA Trigger: TGCTTTGTTCACACTTAAATCTAAAATCCCTTTCAAAGTTCCACAGTGAAAGGTGGAGCCTTTTGCCAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210296.2 |
||
| CDS-3UTR CAA 90 bp | ATCGCCTGCCTGGCGACGGGCGTGCTGTGCTGCCCTCGTGATAACTTAAGGGCCGGGCTTCAACCAGCTTaGAGGCAGGGATCCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: IACLATGVLCCPRDNLRAGLQPA*RQGSQM Trigger: CATCTGGGATCCCTGCCTCAAAGCTGGTTGAAGCCC...GGCCCTTAAGTTATCACGAGGGCAGCACAGCACGCCCGTCGCCAGGCAGGCGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR CAA 90 bp | ATCGCCTGCCTGGCGACGGGCGTGCTGTGCTGCCCTCGTGATAACTTAAGGGCCCCCACCAAGTCTCGATaGATGAGCAGTCGGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: IACLATGVLCCPRDNLRAPTKSR*MSSRGT Trigger: AGTGCCCCGACTGCTCATCAATCGAGACTTGGTGGG...GGCCCTTAAGTTATCACGAGGGCAGCACAGCACGCCCGTCGCCAGGCAGGCGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000211179.2 |
||
| CDS-3UTR CAA 90 bp | ATCGCCTGCCTGGCGACGGGCGTGCTGTGCTGCCCTCGTGATAACTTAAGGGCCCCAGGGTACAGCTCCTaGGCCAACATGAAAAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IACLATGVLCCPRDNLRAPGYSS*ANMKKG Trigger: GCCCTTTTTCATGTTGGCCAAGGAGCTGTACCCTGG...GGCCCTTAAGTTATCACGAGGGCAGCACAGCACGCCCGTCGCCAGGCAGGCGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR CAA 90 bp | CCCTGGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGAAGATCCAGCAGTTCTaGTGTCCACCCCAGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PWSAFPKAASEDHCPGHMKIQQF*CPPQEV Trigger: GACCTCCTGGGGTGGACACAAGAACTGCTGGATCTT...CATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGACCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000211179.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTATGGAGTAGGAACCTaGCAGGCAGCTGCTCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PGQPFQRQPRRTTVQATCYGVGT*QAAAPQ Trigger: TTGGGGAGCAGCTGCCTGCAAGGTTCCTACTCCATA...ACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGACCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGCCCACCAAGTCTCGATaGATGAGCAGTCGGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SAFPKAASEDHCPGHMLWPTKSR*MSSRGT Trigger: AGTGCCCCGACTGCTCATCAATCGAGACTTGGTGGG...CCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000211179.2 |
||
| CDS TCA 90 bp | GCAGAAGCAGCTCCTTGTCGTGGAGGAGCCTCAGGAAGTAGTGAGTaGCATTGGGCCTGTAGTGCCCAGGGTACAGCTCCTTGGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: AEAAPCRGGASGSSE*HWACSAQGTAPWPT Trigger: TGTTGGCCAAGGAGCTGTACCCTGGGCACTACAGGCCCAATGTCACTCACTACTTCCTGAGGCTCCTCCACGACAAGGAGCTGCTTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000137024.8 ENSMUST00000137710.2 ENSMUST00000147331.9 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCAGAAAGCAGCACCTGCACTACACCTTCAGCAGTGATGAGGTGGACAGGGCCCACCAAGTCTCGATaGATGAGCAGTCGGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: AAESSTCTTPSAVMRWTGPTKSR*MSSRGT Trigger: AGTGCCCCGACTGCTCATCAATCGAGACTTGGTGGG...CCCTGTCCACCTCATCACTGCTGAAGGTGTAGTGCAGGTGCTGCTTTCTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000211179.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTGCCAGGGTACAGCTCCTaGGCCAACATGAAAAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AASEDHCPGHMLWSGSCLPGYSS*ANMKKG Trigger: GCCCTTTTTCATGTTGGCCAAGGAGCTGTACCCTGG...CAAACATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTCCAGGGTACAGCTCCTaGGCCAACATGAAAAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FPKAASEDHCPGHMLWSGPGYSS*ANMKKG Trigger: GCCCTTTTTCATGTTGGCCAAGGAGCTGTACCCTGG...ACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTATGGAGTAGGAACCTaGCAGGCAGCTGCTCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FPKAASEDHCPGHMLWSGYGVGT*QAAAPQ Trigger: TTGGGGAGCAGCTGCCTGCAAGGTTCCTACTCCATA...ACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTAAGATCCAGCAGTTCTaGTGTCCACCCCAGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GSLGGPLSRPHVVVWFMFKIQQF*CPPQEV Trigger: GACCTCCTGGGGTGGACACAAGAACTGCTGGATCTT...AAACATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000211179.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTGAAGATCCAGCAGTTCTaGTGTCCACCCCAGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AASEDHCPGHMLWSGSCLKIQQF*CPPQEV Trigger: GACCTCCTGGGGTGGACACAAGAACTGCTGGATCTT...CAAACATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000211179.2 |
||
| CDS TCA 90 bp | CGTGCATGTAGCTGTTACAAAGGTCCCGTGGGCTTCAACCAGCTTTaGGGCAGGGATCCCAGATGCTCTCTCAAGCCCGTCGATGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RACSCYKGPVGFNQL*GRDPRCSLKPVDVL Trigger: CAGAACATCGACGGGCTTGAGAGAGCATCTGGGATCCCTGCCTCAAAGCTGGTTGAAGCCCACGGGACCTTTGTAACAGCTACATGCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000137024.8 ENSMUST00000147331.9 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS CCA 90 bp | AAGGACCTTCGACAGACCGTGCATGTAGCTGTTACAAAGGTCCCGTaGGCTTCAACCAGCTTTGAGGCAGGGATCCCAGATGCTCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: KDLRQTVHVAVTKVP*ASTSFEAGIPDALS Trigger: TGAGAGAGCATCTGGGATCCCTGCCTCAAAGCTGGTTGAAGCCCACGGGACCTTTGTAACAGCTACATGCACGGTCTGTCGAAGGTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000137024.8 ENSMUST00000147331.9 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS-3UTR CAA 90 bp | GGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTCAGCTACACAGCAAATaGAAGGTCATCTCCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: GSLGGPLSRPHVVVWFMFQLHSK*KVISRE Trigger: CTCCCTGGAGATGACCTTCAATTTGCTGTGTAGCTG...AAACATGAACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210296.2 |
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| CDS TCA 90 bp | CAGACAAGCTGGCAAAAGGCTCCACCTCCAGGGAGGTCCCAAGAATaGGTAGCAGATCTGCCAAAGCGAAGTCAGCCATATGGAGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: QTSWQKAPPPGRSQE*VADLPKRSQPYGVG Trigger: TCCTACTCCATATGGCTGACTTCGCTTTGGCAGATCTGCTACTCATTCTTGGGACCTCCCTGGAGGTGGAGCCTTTTGCCAGCTTGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 |
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| CDS TCA 90 bp | AAGTGCTGGTGGCAGTCACCACTACCTCCAGGGAGGTCCCAAGAATaGGTAGCAGATCTGCCAAAGCGAAGTCAGCCATATGGAGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: KCWWQSPLPPGRSQE*VADLPKRSQPYGVG Trigger: TCCTACTCCATATGGCTGACTTCGCTTTGGCAGATCTGCTACTCATTCTTGGGACCTCCCTGGAGGTAGTGGTGACTGCCACCAGCACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211179.2 |
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| CDS GCA 90 bp | GCCAAAGCGAAGTCAGCCATATGGAGTAGGAACCTTGCAGGCAGCTaGTCCCCAAAGAACACAATGTCGGGTTTCACAACGCCAGTACAG | + |
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Preference number: 5 (lower is better) Translates to: AKAKSAIWSRNLAGS*SPKNTMSGFTTPVQ Trigger: CTGTACTGGCGTTGTGAAACCCGACATTGTGTTCTTTGGGGAGCAGCTGCCTGCAAGGTTCCTACTCCATATGGCTGACTTCGCTTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000147331.9 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS CCA 90 bp | TGCTTCAGACAAGCTGGCAAAAGGCTCCACCCATATGTCTTCCCCTaGGAAGGACCTTCGACAGACCGTGCATGTAGCTGTTACAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: CFRQAGKRLHPYVFP*EGPSTDRACSCYKG Trigger: ACCTTTGTAACAGCTACATGCACGGTCTGTCGAAGGTCCTTCCCAGGGGAAGACATATGGGTGGAGCCTTTTGCCAGCTTGTCTGAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137024.8 |
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| CDS CCA 90 bp | GTCCCAAGAATGAGTAGCAGATCTGCCAAAGCGAAGTCAGCCATATaGAGTAGGAACCTTGCAGGCAGCTGCTCCCCAAAGAACACAATG | + |
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Preference number: 5 (lower is better) Translates to: VPRMSSRSAKAKSAI*SRNLAGSCSPKNTM Trigger: CATTGTGTTCTTTGGGGAGCAGCTGCCTGCAAGGTTCCTACTCCATATGGCTGACTTCGCTTTGGCAGATCTGCTACTCATTCTTGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000147331.9 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS-3UTR CAA 90 bp | GATTTCTGTACTGCTTCAGACAAGCTGGCAAAAGGCTCCACCTTTCACTGTGGATATGGAGTAGGAACCTaGCAGGCAGCTGCTCCCCAA | + |
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Preference number: 5 (lower is better) Translates to: DFCTASDKLAKGSTFHCGYGVGT*QAAAPQ Trigger: TTGGGGAGCAGCTGCCTGCAAGGTTCCTACTCCATA...TCCACAGTGAAAGGTGGAGCCTTTTGCCAGCTTGTCTGAAGCAGTACAGAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210296.2 |
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| CDS-3UTR CAA 90 bp | GGTCTGGTTCATGTTTGTAAACGTGTTGGAGCTGTCTTCAGGCATGAAGTCTTGCCAGGGTACAGCTCCTaGGCCAACATGAAAAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: GLVHVCKRVGAVFRHEVLPGYSS*ANMKKG Trigger: GCCCTTTTTCATGTTGGCCAAGGAGCTGTACCCTGG...CAAGACTTCATGCCTGAAGACAGCTCCAACACGTTTACAAACATGAACCAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS-3UTR CAA 90 bp | GGTCTGGTTCATGTTTGTAAACGTGTTGGAGCTGTCTTCAGGCATGAAGTCTTGAAACGAGACATTTGGTaGGTTGGTTGGTTGGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: GLVHVCKRVGAVFRHEVLKRDIW*VGWLVG Trigger: ACCAACCAACCAACCAACCAACCAAATGTCTCGTTT...CAAGACTTCATGCCTGAAGACAGCTCCAACACGTTTACAAACATGAACCAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211179.2 |
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| CDS GCA 90 bp | TGGCAAAAGGCTCCACAGAATAAAGTTGATTCTCCACTTTGTCTCTaGTGCTGTAAACGAGACATTTGGTTGGTTGGTTGGTTGGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: WQKAPQNKVDSPLCL*CCKRDIWLVGWLVG Trigger: ACCAACCAACCAACCAACCAACCAAATGTCTCGTTTACAGCAGCAGAGACAAAGTGGAGAATCAACTTTATTCTGTGGAGCCTTTTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211179.2 |
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| CDS TCA 72 bp | CTTCTTCTCACTGCTTCCTCCACCTCCAAAGCCGCCTaGGGCTCCCACACAGAGGGATATGGGCCTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LLLTASSTSKAA*GSHTEGYGPSP Trigger: GGGAGAAGGCCCATATCCCTCTGTGTGGGAGCCTCAGGCGGCTTTGGAGGTGGAGGAAGCAGTGAGAAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147331.9 |
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| CDS CCA 72 bp | GTCCTGGCTGTCCTTCCTCTGCCTCTAAAGTGCTGGTaGCAGTCACCACTACCTCCAGGGAGGTCCCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: VLAVLPLPLKCW*QSPLPPGRSQE Trigger: TTCTTGGGACCTCCCTGGAGGTAGTGGTGACTGCCACCAGCACTTTAGAGGCAGAGGAAGGACAGCCAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211179.2 |
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| CDS GCA 72 bp | TGTATAGTCCTGGCTGTCCTTCCTCTGCCTCTAAAGTaGTGGTGGCAGTCACCACTACCTCCAGGGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CIVLAVLPLPLK*WWQSPLPPGRS Trigger: GGACCTCCCTGGAGGTAGTGGTGACTGCCACCAGCACTTTAGAGGCAGAGGAAGGACAGCCAGGACTATACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211179.2 |
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| CDS CCA 72 bp | ATAGTCCTGGCTGTCCTTCCTCTGCCTCTAAAGTGCTaGTGGCAGTCACCACTACCTCCAGGGAGGTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: IVLAVLPLPLKC*WQSPLPPGRSQ Trigger: TTGGGACCTCCCTGGAGGTAGTGGTGACTGCCACCAGCACTTTAGAGGCAGAGGAAGGACAGCCAGGACTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211179.2 |
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| CDS CCA 72 bp | CGACAGACCGTGCATGTAGCTGTTACAAAGGTCCCGTaGGCTTCAACCAGCTTTGAGGCAGGGATCCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: RQTVHVAVTKVP*ASTSFEAGIPD Trigger: ATCTGGGATCCCTGCCTCAAAGCTGGTTGAAGCCCACGGGACCTTTGTAACAGCTACATGCACGGTCTGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000137024.8 ENSMUST00000147331.9 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS CCA 72 bp | GTCGGGGCACTGATTTCTGTACTGCTTCAGACAAGCTaGCAAAAGGCTCCACCTCCAGGGAGGTCCCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: VGALISVLLQTS*QKAPPPGRSQE Trigger: TTCTTGGGACCTCCCTGGAGGTGGAGCCTTTTGCCAGCTTGTCTGAAGCAGTACAGAAATCAGTGCCCCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 |
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| CDS CCA 72 bp | CAAGCTGGCAAAAGGCTCCACCCATATGTCTTCCCCTaGGAAGGACCTTCGACAGACCGTGCATGTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: QAGKRLHPYVFP*EGPSTDRACSC Trigger: ACAGCTACATGCACGGTCTGTCGAAGGTCCTTCCCAGGGGAAGACATATGGGTGGAGCCTTTTGCCAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137024.8 |
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| CDS GCA 72 bp | CTGCAGGCTCTGGTCCGAAGCAGCTCAGCTACATCCTaGAGAGAAAACTTCTTCTCACTGCTTCCTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: LQALVRSSSATS*RENFFSLLPPP Trigger: AGGTGGAGGAAGCAGTGAGAAGAAGTTTTCTCTGCAGGATGTAGCTGAGCTGCTTCGGACCAGAGCCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147331.9 |
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| CDS CAA 72 bp | CTGCCAAAGCGAAGTCAGCCATATGGAGTAGGAACCTaGCAGGCAGCTGCTCCCCAAAGAACACAATGTCGG | + |
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Preference number: 6 (lower is better) Translates to: LPKRSQPYGVGT*QAAAPQRTQCR Trigger: CCGACATTGTGTTCTTTGGGGAGCAGCTGCCTGCAAGGTTCCTACTCCATATGGCTGACTTCGCTTTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000147331.9 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS TCA 72 bp | TGGCAAAAGGCTCCACCTCCAGGGAGGTCCCAAGAATaGGTAGCAGATCTGCCAAAGCGAAGTCAGCCATAT | + |
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Preference number: 6 (lower is better) Translates to: WQKAPPPGRSQE*VADLPKRSQPY Trigger: ATATGGCTGACTTCGCTTTGGCAGATCTGCTACTCATTCTTGGGACCTCCCTGGAGGTGGAGCCTTTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 |
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| CDS TCA 72 bp | TGGCAGTCACCACTACCTCCAGGGAGGTCCCAAGAATaGGTAGCAGATCTGCCAAAGCGAAGTCAGCCATAT | + |
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Preference number: 6 (lower is better) Translates to: WQSPLPPGRSQE*VADLPKRSQPY Trigger: ATATGGCTGACTTCGCTTTGGCAGATCTGCTACTCATTCTTGGGACCTCCCTGGAGGTAGTGGTGACTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211179.2 |
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| CDS CCA 72 bp | ATGAGTAGCAGATCTGCCAAAGCGAAGTCAGCCATATaGAGTAGGAACCTTGCAGGCAGCTGCTCCCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: MSSRSAKAKSAI*SRNLAGSCSPK Trigger: CTTTGGGGAGCAGCTGCCTGCAAGGTTCCTACTCCATATGGCTGACTTCGCTTTGGCAGATCTGCTACTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000147331.9 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS CAA 90 bp | GTAGCAGATCTGCCAAAGCGAAGTCAGCCATATGGAGTAGGAACCTaGCAGGCAGCTGCTCCCCAAAGAACACAATGTCGGGTTTCACAA | + |
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Preference number: 6 (lower is better) Translates to: VADLPKRSQPYGVGT*QAAAPQRTQCRVSQ Trigger: TTGTGAAACCCGACATTGTGTTCTTTGGGGAGCAGCTGCCTGCAAGGTTCCTACTCCATATGGCTGACTTCGCTTTGGCAGATCTGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000147331.9 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS GCA 72 bp | AAGTCAGCCATATGGAGTAGGAACCTTGCAGGCAGCTaGTCCCCAAAGAACACAATGTCGGGTTTCACAACG | + |
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Preference number: 6 (lower is better) Translates to: KSAIWSRNLAGS*SPKNTMSGFTT Trigger: CGTTGTGAAACCCGACATTGTGTTCTTTGGGGAGCAGCTGCCTGCAAGGTTCCTACTCCATATGGCTGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026559.14 ENSMUST00000106048.10 ENSMUST00000147331.9 ENSMUST00000210296.2 ENSMUST00000211179.2 |
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| CDS CCA 72 bp | GTCGGGGCACTGATTTCTGTACTGCTTCAGACAAGCTaGCAAAAGGCTCCACAGAATAAAGTTGATTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VGALISVLLQTS*QKAPQNKVDSP Trigger: TGGAGAATCAACTTTATTCTGTGGAGCCTTTTGCCAGCTTGTCTGAAGCAGTACAGAAATCAGTGCCCCGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211179.2 |
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| CDS GCA 72 bp | CCACAGAATAAAGTTGATTCTCCACTTTGTCTCTGCTaGTGTAAACGAGACATTTGGTTGGTTGGTTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: PQNKVDSPLCLC*CKRDIWLVGWL Trigger: CAACCAACCAACCAACCAAATGTCTCGTTTACAGCAGCAGAGACAAAGTGGAGAATCAACTTTATTCTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211179.2 |
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