Pregenerated sensors for SIRT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015149Ensembl transcript IDs: ENSMUST00000072965.5, ENSMUST00000122915.8, ENSMUST00000155327.8, ENSMUST00000170068.9
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATTTGTTTCTAATAAGCAAGGTCTCTTGCTCATCCACCAACAGCTaGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTT | + |
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Preference number: 1 (lower is better) Translates to: NLFLISKVSCSSTNS*QVGPQEREPSTHFV Trigger: AACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCAAGAGACCTTGCTTATTAGAAACAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR CAA 90 bp | GCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTaGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACA | + |
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Preference number: 2 (lower is better) Translates to: AGKWVPRKGSLVPTL*EAESWQAFRLRDPT Trigger: TGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR CAA 90 bp | ACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTaGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCC | + |
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Preference number: 2 (lower is better) Translates to: TAGKWVPRKGSLVPT*LEAESWQAFRLRDP Trigger: GGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACAAGGCCCCACCCCCTTGGGTGAAGTTAGGGAAGGCTaGTTCTTGCCTGGGTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: RVGRPSGSEIPQGPTPLGEVREG*FLPGWL Trigger: TAACCACCCAGGCAAGAAGCAGCCTTCCCTAACTTC...ACCCAAGGGGGTGGGGCCTTGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR-3UTR GCA 90 bp | GGTCTCTTGCTCATCCACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCGAAGTTAGGGAAGGCTaGTTCTTGCCTGGGTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: GLLLIHQQLASGSPGKGAEVREG*FLPGWL Trigger: TAACCACCCAGGCAAGAAGCAGCCTTCCCTAACTTC...GGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCAAGAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACAAGGCCAGAACGAAGGGTCTTTaGGCTCACACAAGCTGCATG | + |
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Preference number: 2 (lower is better) Translates to: FVGGRELAGLQAQRSHKARTKGL*AHTSCM Trigger: CATGCAGCTTGTGTGAGCTCAAAGACCCTTCGTTCT...GGCCTTGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGAGAACGAAGGGTCTTTaGGCTCACACAAGCTGCATG | + |
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Preference number: 2 (lower is better) Translates to: TAGKWVPRKGSLVPTLLERTKGL*AHTSCM Trigger: CATGCAGCTTGTGTGAGCTCAAAGACCCTTCGTTCT...CTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR-3UTR CCA 90 bp | GTACCCACTTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCTGCTTCTTGCCTGGGTaGTTAGAGGCTATGGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: VPTLLEAESWQAFRLRDPCFLPG*LEAMVV Trigger: AACCACCATAGCCTCTAACCACCCAGGCAAGAAGCA...GGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAAGTGGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR-3UTR TCA 90 bp | AGGCTATGGTGGTTAGAGGCTATGGTGGTTAGAGGCCCCAGCTACAGACTGCACAGAACGAAGGGTCTTTaGGCTCACACAAGCTGCATG | + |
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Preference number: 2 (lower is better) Translates to: RLWWLEAMVVRGPSYRLHRTKGL*AHTSCM Trigger: CATGCAGCTTGTGTGAGCTCAAAGACCCTTCGTTCT...GTGCAGTCTGTAGCTGGGGCCTCTAACCACCATAGCCTCTAACCACCATAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR-3UTR TCA 90 bp | GAGATCCCACAAGGCCCCACCCCCTTGGGTGAAGTTCTATTTGTAGAGTCCAGCAGAACGAAGGGTCTTTaGGCTCACACAAGCTGCATG | + |
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Preference number: 2 (lower is better) Translates to: EIPQGPTPLGEVLFVESSRTKGL*AHTSCM Trigger: CATGCAGCTTGTGTGAGCTCAAAGACCCTTCGTTCT...GCTGGACTCTACAAATAGAACTTCACCCAAGGGGGTGGGGCCTTGTGGGATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR-3UTR CCA 90 bp | ACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTTGCTTCTTGCCTGGGTaGTTAGAGGCTATGGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: TNSWQVGPQEREPSTHFVCFLPG*LEAMVV Trigger: AACCACCATAGCCTCTAACCACCCAGGCAAGAAGCA...AACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR CAA 90 bp | TTGGGGACCCTGATTTCAAGAACGTGGTTAAAGAACGAAGGGTCTTaGAGCTCACACAAGCTGCATGTTAAGAGGGCCCAGTGCTGGCCG | + |
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Preference number: 2 (lower is better) Translates to: LGTLISRTWLKNEGS*SSHKLHVKRAQCWP Trigger: CGGCCAGCACTGGGCCCTCTTAACATGCAGCTTGTGTGAGCTCAAAGACCCTTCGTTCTTTAACCACGTTCTTGAAATCAGGGTCCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR-3UTR TCA 90 bp | TTGTTTCTAATAAGCAAGGTCTCTTGCTCATCCACCAACAGCTGGCAAGTGGGTCGGGGTAGGTTAATTTaGTTTAGCCATAGGCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LFLISKVSCSSTNSWQVGRGRLI*FSHRPP Trigger: AGGGGGCCTATGGCTAAATCAAATTAACCTACCCCG...ACCCACTTGCCAGCTGTTGGTGGATGAGCAAGAGACCTTGCTTATTAGAAACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGATTTAGCCATAGGCCCCCTGAAAACAATAGAGAAATGCCTTATTCTGGCATGCTTCTTGCCTGGGTaGTTAGAGGCTATGGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: FDLAIGPLKTIEKCLILACFLPG*LEAMVV Trigger: AACCACCATAGCCTCTAACCACCCAGGCAAGAAGCA...TGCCAGAATAAGGCATTTCTCTATTGTTTTCAGGGGGCCTATGGCTAAATCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR CCA 72 bp | AGCTCACACAAGCTGCATGTTAAGAGGGCCCAGTGCTaGCCGGGCTCCGCTGTCCTGCGGGAGGTCATGGTT | + |
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Preference number: 3 (lower is better) Translates to: SSHKLHVKRAQC*PGSAVLREVMV Trigger: AACCATGACCTCCCGCAGGACAGCGGAGCCCGGCCAGCACTGGGCCCTCTTAACATGCAGCTTGTGTGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR-3UTR CAA 90 bp | TCTCTTGCTCATCCACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTTGGAGGCAGAGAGTaGGCAGGCCTTCAGGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: SLAHPPTAGKWVPRKGSLVGGRE*AGLQAQ Trigger: CTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAAC...TAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCAAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR CCA 72 bp | CTAATAAGCAAGGTCTCTTGCTCATCCACCAACAGCTaGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACC | + |
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Preference number: 3 (lower is better) Translates to: LISKVSCSSTNS*QVGPQEREPST Trigger: GGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCAAGAGACCTTGCTTATTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | GCTCACACAAGCTGCATGTTAAGAGGGCCCAGTGCTGGCCGGGCTCCGCTGTCCAGGGAGGCGAAGGGCTaGACCTGCAGGGAGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: AHTSCMLRGPSAGRAPLSREAKG*TCREVP Trigger: GGGCACCTCCCTGCAGGTGCAGCCCTTCGCCTCCCT...GGACAGCGGAGCCCGGCCAGCACTGGGCCCTCTTAACATGCAGCTTGTGTGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | GCTCACACAAGCTGCATGTTAAGAGGGCCCAGTGCTGGCCGGGCTCCGCTGTCCTCCTGGCCGCCTCCTTaGCAGGCGGTGGGGACTTTC | + |
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Preference number: 4 (lower is better) Translates to: AHTSCMLRGPSAGRAPLSSWPPP*QAVGTF Trigger: GAAAGTCCCCACCGCCTGCCAAGGAGGCGGCCAGGA...GGACAGCGGAGCCCGGCCAGCACTGGGCCCTCTTAACATGCAGCTTGTGTGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR TCA 90 bp | AAGCTGCATGTTAAGAGGGCCCAGTGCTGGCCGGGCTCCGCTGTCCTGCGGGAGAGAGCCAGGCAGCCTTaGTCACAGTCACCCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KLHVKRAQCWPGSAVLRERARQP*SQSPSQ Trigger: CTGGCTGGGTGACTGTGATCAAGGCTGCCTGGCTCT...CTCCCGCAGGACAGCGGAGCCCGGCCAGCACTGGGCCCTCTTAACATGCAGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | GCTCACACAAGCTGCATGTTAAGAGGGCCCAGTGCTGGCCGGGCTCCGCTGTCCGCGAAGGGCTGCACCTaGAGGGAGGTGCCCATGATG | + |
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Preference number: 4 (lower is better) Translates to: AHTSCMLRGPSAGRAPLSAKGCT*REVPMM Trigger: CATCATGGGCACCTCCCTGCAGGTGCAGCCCTTCGC...GGACAGCGGAGCCCGGCCAGCACTGGGCCCTCTTAACATGCAGCTTGTGTGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR TCA 90 bp | GGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACAAGGCCCCACCCCCTAGAGCCAGGCAGCCTTaGTCACAGTCACCCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GRELAGLQAQRSHKAPPPRARQP*SQSPSQ Trigger: CTGGCTGGGTGACTGTGATCAAGGCTGCCTGGCTCT...AGGGGGTGGGGCCTTGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | ACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGAGGGAGGCGAAGGGCTaGACCTGCAGGGAGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: TAGKWVPRKGSLVPTLLEREAKG*TCREVP Trigger: GGGCACCTCCCTGCAGGTGCAGCCCTTCGCCTCCCT...CTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | AGGCTATGGTGGTTAGAGGCTATGGTGGTTAGAGGCCCCAGCTACAGACTGCACGCCTCCACCAGGTCCTaGGGCTCCAGCCCCGCCACT | + |
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Preference number: 4 (lower is better) Translates to: RLWWLEAMVVRGPSYRLHASTRS*GSSPAT Trigger: AGTGGCGGGGCTGGAGCCCCAGGACCTGGTGGAGGC...GTGCAGTCTGTAGCTGGGGCCTCTAACCACCATAGCCTCTAACCACCATAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | TGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGGCAGATCCTGGCCGCCTCCTTaGCAGGCGGTGGGGACTTTC | + |
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Preference number: 4 (lower is better) Translates to: WQVGPQEREPSTHFVGGRSWPPP*QAVGTF Trigger: GAAAGTCCCCACCGCCTGCCAAGGAGGCGGCCAGGA...TCTGCCTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | TTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACAAGGCCTCCTGGCCGCCTCCTTaGCAGGCGGTGGGGACTTTC | + |
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Preference number: 4 (lower is better) Translates to: FVGGRELAGLQAQRSHKASWPPP*QAVGTF Trigger: GAAAGTCCCCACCGCCTGCCAAGGAGGCGGCCAGGA...GGCCTTGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR TCA 90 bp | GCTCACACAAGCTGCATGTTAAGAGGGCCCAGTGCTGGCCGGGCTCCGCTGTCCGGCCCAGGGTCTGGGTaGATAAATTCCTCAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: AHTSCMLRGPSAGRAPLSGPGSG*INSSGS Trigger: ACTTCCTGAGGAATTTATTCACCCAGACCCTGGGCC...GGACAGCGGAGCCCGGCCAGCACTGGGCCCTCTTAACATGCAGCTTGTGTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 |
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| CDS-3UTR GCA 90 bp | GTACCCACTTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCGCGAAGGGCTGCACCTaGAGGGAGGTGCCCATGATG | + |
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Preference number: 4 (lower is better) Translates to: VPTLLEAESWQAFRLRDPAKGCT*REVPMM Trigger: CATCATGGGCACCTCCCTGCAGGTGCAGCCCTTCGC...GGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAAGTGGGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | ACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGGCGAAGGGCTGCACCTaGAGGGAGGTGCCCATGATG | + |
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Preference number: 4 (lower is better) Translates to: TAGKWVPRKGSLVPTLLEAKGCT*REVPMM Trigger: CATCATGGGCACCTCCCTGCAGGTGCAGCCCTTCGC...CTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | GGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACAAGGCCCCACCCCCTTGGAGTCAAAATCCATaGCACCTCCCAGGCCCATCA | + |
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Preference number: 4 (lower is better) Translates to: GRELAGLQAQRSHKAPPPWSQNP*HLPGPS Trigger: TGATGGGCCTGGGAGGTGGCATGGATTTTGACTCCA...AGGGGGTGGGGCCTTGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | AAGAACGAAGGGTCTTTGAGCTCACACAAGCTGCATGTTAAGAGGGCCCAGTGCGCCTCCACCAGGTCCTaGGGCTCCAGCCCCGCCACT | + |
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Preference number: 4 (lower is better) Translates to: KNEGSLSSHKLHVKRAQCASTRS*GSSPAT Trigger: AGTGGCGGGGCTGGAGCCCCAGGACCTGGTGGAGGC...GCACTGGGCCCTCTTAACATGCAGCTTGTGTGAGCTCAAAGACCCTTCGTTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | CAGCTACAGACTGCACAGGCCTCAGCCCCTAGGTATATTAGGCTTTTCTGGGATGCCTCCACCAGGTCCTaGGGCTCCAGCCCCGCCACT | + |
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Preference number: 4 (lower is better) Translates to: QLQTAQASAPRYIRLFWDASTRS*GSSPAT Trigger: AGTGGCGGGGCTGGAGCCCCAGGACCTGGTGGAGGC...ATCCCAGAAAAGCCTAATATACCTAGGGGCTGAGGCCTGTGCAGTCTGTAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | AAGCTGCATGTTAAGAGGGCCCAGTGCTGGCCGGGCTCCGCTGTCCTGCGGGAGAGGAAGGGGTCCGTCTaGCCTGTCTTTTCCTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: KLHVKRAQCWPGSAVLRERKGSV*PVFSLL Trigger: TAACAAGGAAAAGACAGGCCAGACGGACCCCTTCCT...CTCCCGCAGGACAGCGGAGCCCGGCCAGCACTGGGCCCTCTTAACATGCAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | GGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACAAGGCCCCACCCCCTACTGGGCATCTATGTTaGCATGCTCCCTCCGGACAA | + |
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Preference number: 4 (lower is better) Translates to: GRELAGLQAQRSHKAPPPTGHLC*HAPSGQ Trigger: TTGTCCGGAGGGAGCATGCCAACATAGATGCCCAGT...AGGGGGTGGGGCCTTGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | CCTTCAGGCTCAGAGATCCCACAAGGCCCCACCCCCTTGGGTGAAGTTCTATTTTCCTGGCCGCCTCCTTaGCAGGCGGTGGGGACTTTC | + |
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Preference number: 4 (lower is better) Translates to: PSGSEIPQGPTPLGEVLFSWPPP*QAVGTF Trigger: GAAAGTCCCCACCGCCTGCCAAGGAGGCGGCCAGGA...AAATAGAACTTCACCCAAGGGGGTGGGGCCTTGTGGGATCTCTGAGCCTGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR TCA 90 bp | AGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACAAGGCCCCACCCCCTTGGGTGGTGTTGACACAGTGTaGTGTGTAGAAGGTGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: RVGRPSGSEIPQGPTPLGGVDTV*CVEGAV Trigger: CACGGCACCTTCTACACATCACACTGTGTCAACACC...ACCCAAGGGGGTGGGGCCTTGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR TCA 90 bp | TGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGGCAGAGAGTTGGAGAGCCAGGCAGCCTTaGTCACAGTCACCCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: WVPRKGSLVPTLLEAESWRARQP*SQSPSQ Trigger: CTGGCTGGGTGACTGTGATCAAGGCTGCCTGGCTCT...CCAACTCTCTGCCTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR TCA 90 bp | TTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACAAGGCCAGAGCCAGGCAGCCTTaGTCACAGTCACCCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: FVGGRELAGLQAQRSHKARARQP*SQSPSQ Trigger: CTGGCTGGGTGACTGTGATCAAGGCTGCCTGGCTCT...GGCCTTGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | GAGATCCCACAAGGCCCCACCCCCTTGGGTGAAGTTCTATTTGTAGAGTCCAGCGCGAAGGGCTGCACCTaGAGGGAGGTGCCCATGATG | + |
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Preference number: 4 (lower is better) Translates to: EIPQGPTPLGEVLFVESSAKGCT*REVPMM Trigger: CATCATGGGCACCTCCCTGCAGGTGCAGCCCTTCGC...GCTGGACTCTACAAATAGAACTTCACCCAAGGGGGTGGGGCCTTGTGGGATCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | AGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACAAGGCCCCACCCCCTTGGGTTGGAGTCAAAATCCATaGCACCTCCCAGGCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RVGRPSGSEIPQGPTPLGWSQNP*HLPGPS Trigger: TGATGGGCCTGGGAGGTGGCATGGATTTTGACTCCA...ACCCAAGGGGGTGGGGCCTTGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | GCTCACACAAGCTGCATGTTAAGAGGGCCCAGTGCTGGCCGGGCTCCGCTGTCCGACACTGCTCACACCTaGGAGTTGCTTCTGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AHTSCMLRGPSAGRAPLSDTAHT*ELLLRR Trigger: TCTTCTCAGAAGCAACTCCCAGGTGTGAGCAGTGTC...GGACAGCGGAGCCCGGCCAGCACTGGGCCCTCTTAACATGCAGCTTGTGTGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | GTACCCACTTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCCAGGAAGTCCATCTCTaGCTCTCCACCAGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPTLLEAESWQAFRLRDPQEVHL*LSTSGS Trigger: GGAGCCACTGGTGGAGAGGCAGAGATGGACTTCCTG...GGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAAGTGGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072965.5 |
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| CDS-3UTR GCA 90 bp | TTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACAAGGCCGTGATGTGTAGAAGGTaGCGTGGGCCTCCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FVGGRELAGLQAQRSHKAVMCRR*RGPPPG Trigger: ACCTGGTGGAGGCCCACGGCACCTTCTACACATCAC...GGCCTTGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | CCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGTGATGTGTAGAAGGTaGCGTGGGCCTCCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTAGKWVPRKGSLVPTLLVMCRR*RGPPPG Trigger: ACCTGGTGGAGGCCCACGGCACCTTCTACACATCAC...CAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | TCTCTTGCTCATCCACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTGATGTGTAGAAGGTaGCGTGGGCCTCCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLAHPPTAGKWVPRKGSLVMCRR*RGPPPG Trigger: ACCTGGTGGAGGCCCACGGCACCTTCTACACATCAC...TAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCAAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | GAGATCCCACAAGGCCCCACCCCCTTGGGTGAAGTTCTATTTGTAGAGTCCAGCTGCACCTTCCCTGCCTaGGTCTCCAGAGGGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EIPQGPTPLGEVLFVESSCTFPA*VSRGSE Trigger: CTCTGACCCTCTGGAGACCCAGGCAGGGAAGGTGCA...GCTGGACTCTACAAATAGAACTTCACCCAAGGGGGTGGGGCCTTGTGGGATCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072965.5 |
||
| CDS-3UTR CCA 90 bp | TTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACAAGGCCTTGCATAGAGGCCAGTaGACGGGGAGCGGAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FVGGRELAGLQAQRSHKALHRGQ*TGSGSQ Trigger: CTGACTTCCGCTCCCCGTCCACTGGCCTCTATGCAA...GGCCTTGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| 3UTR CAA 72 bp | TGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTaGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVPRKGSLVPTL*EAESWQAFRLR Trigger: TCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| 3UTR CAA 72 bp | AAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTaGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KWVPRKGSLVPT*LEAESWQAFRL Trigger: GAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR TCA 90 bp | CCCAGCTACAGACTGCACAGGCCTCAGCCCCTAGGTATATTAGGCTTTTCTGGGTCCGAGTCTGAATCCTaGGCCTCCTGCACCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSYRLHRPQPLGILGFSGSESES*ASCTFP Trigger: AGGGAAGGTGCAGGAGGCTCAGGATTCAGACTCGGA...CCCAGAAAAGCCTAATATACCTAGGGGCTGAGGCCTGTGCAGTCTGTAGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072965.5 |
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| CDS-3UTR GCA 90 bp | CAGCTACAGACTGCACAGGCCTCAGCCCCTAGGTATATTAGGCTTTTCTGGGATCTCCTGCACCTTCCCTaGCTGGGTCTCCAGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QLQTAQASAPRYIRLFWDLLHLP*LGLQRV Trigger: GACCCTCTGGAGACCCAGGCAGGGAAGGTGCAGGAG...ATCCCAGAAAAGCCTAATATACCTAGGGGCTGAGGCCTGTGCAGTCTGTAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072965.5 |
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| CDS-3UTR CCA 90 bp | GAGATCCCACAAGGCCCCACCCCCTTGGGTGAAGTTCTATTTGTAGAGTCCAGCTTGCATAGAGGCCAGTaGACGGGGAGCGGAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EIPQGPTPLGEVLFVESSLHRGQ*TGSGSQ Trigger: CTGACTTCCGCTCCCCGTCCACTGGCCTCTATGCAA...GCTGGACTCTACAAATAGAACTTCACCCAAGGGGGTGGGGCCTTGTGGGATCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CCA 90 bp | CCTTCAGGCTCAGAGATCCCACAAGGCCCCACCCCCTTGGGTGAAGTTCTATTTTTGCATAGAGGCCAGTaGACGGGGAGCGGAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSGSEIPQGPTPLGEVLFLHRGQ*TGSGSQ Trigger: CTGACTTCCGCTCCCCGTCCACTGGCCTCTATGCAA...AAATAGAACTTCACCCAAGGGGGTGGGGCCTTGTGGGATCTCTGAGCCTGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | CCCAGCTACAGACTGCACAGGCCTCAGCCCCTAGGTATATTAGGCTTTTCTGGGTTGCATAGAGGCCAGTaGACGGGGAGCGGAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSYRLHRPQPLGILGFSGLHRGQ*TGSGSQ Trigger: CTGACTTCCGCTCCCCGTCCACTGGCCTCTATGCAA...CCCAGAAAAGCCTAATATACCTAGGGGCTGAGGCCTGTGCAGTCTGTAGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | TTGTTTCTAATAAGCAAGGTCTCTTGCTCATCCACCAACAGCTGGCAAGTGGGTGCCTCCACCAGGTCCTaGGGCTCCAGCCCCGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LFLISKVSCSSTNSWQVGASTRS*GSSPAT Trigger: AGTGGCGGGGCTGGAGCCCCAGGACCTGGTGGAGGC...ACCCACTTGCCAGCTGTTGGTGGATGAGCAAGAGACCTTGCTTATTAGAAACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | TCTCTTGCTCATCCACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTTCCTCTTTCTCTTTaGTCCTGGCCGCCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLAHPPTAGKWVPRKGSLVPLSL*SWPPPW Trigger: CCAAGGAGGCGGCCAGGACCAAAGAGAAAGAGGAAC...TAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCAAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CCA 90 bp | TTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACAAGGCCGTTCCTCTTTCTCTTTaGTCCTGGCCGCCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FVGGRELAGLQAQRSHKAVPLSL*SWPPPW Trigger: CCAAGGAGGCGGCCAGGACCAAAGAGAAAGAGGAAC...GGCCTTGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | TGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGGCAGAGTTCCTCTTTCTCTTTaGTCCTGGCCGCCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WQVGPQEREPSTHFVGGRVPLSL*SWPPPW Trigger: CCAAGGAGGCGGCCAGGACCAAAGAGAAAGAGGAAC...TCTGCCTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR TCA 90 bp | CCCAGCTACAGACTGCACAGGCCTCAGCCCCTAGGTATATTAGGCTTTTCTGGGCCTTCAGCAGGCGGATaGAGTAGTGGCAGATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSYRLHRPQPLGILGFSGPSAGG*SSGRWL Trigger: CAACCATCTGCCACTACTTCATCCGCCTGCTGAAGG...CCCAGAAAAGCCTAATATACCTAGGGGCTGAGGCCTGTGCAGTCTGTAGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR TCA 90 bp | GTACCCACTTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCGGTGTTGACACAGTGTaGTGTGTAGAAGGTGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VPTLLEAESWQAFRLRDPGVDTV*CVEGAV Trigger: CACGGCACCTTCTACACATCACACTGTGTCAACACC...GGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAAGTGGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR TCA 90 bp | TTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACAAGGCCGGTGTTGACACAGTGTaGTGTGTAGAAGGTGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: FVGGRELAGLQAQRSHKAGVDTV*CVEGAV Trigger: CACGGCACCTTCTACACATCACACTGTGTCAACACC...GGCCTTGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | AGGTCTCTTGCTCATCCACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCAGAAGTCTGACTGCATaGAGGAGAAGAAGCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: RSLAHPPTAGKWVPRKGSRSLTA*RRRSAM Trigger: CATCGCGCTTCTTCTCCTGCATGCAGTCAGACTTCT...GCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCAAGAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | TGCTCATCCACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCAGAAGTCTGACTGCATaGAGGAGAAGAAGCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: CSSTNSWQVGPQEREPSTRSLTA*RRRSAM Trigger: CATCGCGCTTCTTCTCCTGCATGCAGTCAGACTTCT...GGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | TTGTTTCTAATAAGCAAGGTCTCTTGCTCATCCACCAACAGCTGGCAAGTGGGTAGGGAGGCGAAGGGCTaGACCTGCAGGGAGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLISKVSCSSTNSWQVGREAKG*TCREVP Trigger: GGGCACCTCCCTGCAGGTGCAGCCCTTCGCCTCCCT...ACCCACTTGCCAGCTGTTGGTGGATGAGCAAGAGACCTTGCTTATTAGAAACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | ACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGTGGAGTCAAAATCCATaGCACCTCCCAGGCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TAGKWVPRKGSLVPTLLEWSQNP*HLPGPS Trigger: TGATGGGCCTGGGAGGTGGCATGGATTTTGACTCCA...CTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | TGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGGCAGAGAGTTGGGCATCTATGTTGGCATaGTCCCTCCGGACAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WVPRKGSLVPTLLEAESWASMLA*SLRTRS Trigger: AGACCTTGTCCGGAGGGAGCATGCCAACATAGATGC...CCAACTCTCTGCCTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | TCTCTTGCTCATCCACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGCATCTATGTTGGCATaGTCCCTCCGGACAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLAHPPTAGKWVPRKGSLASMLA*SLRTRS Trigger: AGACCTTGTCCGGAGGGAGCATGCCAACATAGATGC...TAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCAAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR GCA 90 bp | TGGTGGTTAGAGGCTATGGTGGTTAGAGGCCCCAGCTACAGACTGCACAGGCCTGCATCTATGTTGGCATaGTCCCTCCGGACAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WWLEAMVVRGPSYRLHRPASMLA*SLRTRS Trigger: AGACCTTGTCCGGAGGGAGCATGCCAACATAGATGC...AGGCCTGTGCAGTCTGTAGCTGGGGCCTCTAACCACCATAGCCTCTAACCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | AGGTCTCTTGCTCATCCACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCAGGAAGGGGTCCGTCTaGCCTGTCTTTTCCTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RSLAHPPTAGKWVPRKGSRKGSV*PVFSLL Trigger: TAACAAGGAAAAGACAGGCCAGACGGACCCCTTCCT...GCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCAAGAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | ACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGACTGGGCATCTATGTTaGCATGCTCCCTCCGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: TAGKWVPRKGSLVPTLLETGHLC*HAPSGQ Trigger: TTGTCCGGAGGGAGCATGCCAACATAGATGCCCAGT...CTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | AGGCTATGGTGGTTAGAGGCTATGGTGGTTAGAGGCCCCAGCTACAGACTGCACGTTCCTCTTTCTCTTTaGTCCTGGCCGCCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLWWLEAMVVRGPSYRLHVPLSL*SWPPPW Trigger: CCAAGGAGGCGGCCAGGACCAAAGAGAAAGAGGAAC...GTGCAGTCTGTAGCTGGGGCCTCTAACCACCATAGCCTCTAACCACCATAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR TCA 90 bp | GAGATCCCACAAGGCCCCACCCCCTTGGGTGAAGTTCTATTTGTAGAGTCCAGCGGCCCAGGGTCTGGGTaGATAAATTCCTCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EIPQGPTPLGEVLFVESSGPGSG*INSSGS Trigger: ACTTCCTGAGGAATTTATTCACCCAGACCCTGGGCC...GCTGGACTCTACAAATAGAACTTCACCCAAGGGGGTGGGGCCTTGTGGGATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGCTACAGACTGCACAGGCCTCAGCCCCTAGGTATATTAGGCTTTTCTGGGGGTGTTGACACAGTGTaGTGTGTAGAAGGTGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSYRLHRPQPLGILGFSGGVDTV*CVEGAV Trigger: CACGGCACCTTCTACACATCACACTGTGTCAACACC...CCCAGAAAAGCCTAATATACCTAGGGGCTGAGGCCTGTGCAGTCTGTAGCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR TCA 90 bp | GGTCTCTTGCTCATCCACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCCCTGGGAGTTGCTTCTaGGAAGATCTTCTCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLLLIHQQLASGSPGKGAPGSCF*EDLLFH Trigger: ATGAAAGAGAAGATCTTCTCAGAAGCAACTCCCAGG...GGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCAAGAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR TCA 90 bp | TGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGGCAGACACCTTGGAGAAGTCTaGCTGCATGCAGGAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WQVGPQEREPSTHFVGGRHLGEV*LHAGEE Trigger: TTCTTCTCCTGCATGCAGTCAGACTTCTCCAAGGTG...TCTGCCTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR TCA 90 bp | ACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGCACCTTGGAGAAGTCTaGCTGCATGCAGGAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TAGKWVPRKGSLVPTLLEHLGEV*LHAGEE Trigger: TTCTTCTCCTGCATGCAGTCAGACTTCTCCAAGGTG...CTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR GCA 90 bp | AGGCTATGGTGGTTAGAGGCTATGGTGGTTAGAGGCCCCAGCTACAGACTGCACGCATCTATGTTGGCATaGTCCCTCCGGACAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLWWLEAMVVRGPSYRLHASMLA*SLRTRS Trigger: AGACCTTGTCCGGAGGGAGCATGCCAACATAGATGC...GTGCAGTCTGTAGCTGGGGCCTCTAACCACCATAGCCTCTAACCACCATAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CCA 90 bp | TGCTCATCCACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCTCAAAGATGGCCTCTaGGTAAGGAAGGTGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: CSSTNSWQVGPQEREPSTLKDGL*VRKVVL Trigger: AAGTACCACCTTCCTTACCCAGAGGCCATCTTTGAG...GGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CCA 90 bp | GTACCCACTTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCGACACTGCTCACACCTaGGAGTTGCTTCTGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPTLLEAESWQAFRLRDPDTAHT*ELLLRR Trigger: TCTTCTCAGAAGCAACTCCCAGGTGTGAGCAGTGTC...GGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAAGTGGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CCA 90 bp | GTACCCACTTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCAGGAAGGGGTCCGTCTaGCCTGTCTTTTCCTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VPTLLEAESWQAFRLRDPRKGSV*PVFSLL Trigger: TAACAAGGAAAAGACAGGCCAGACGGACCCCTTCCT...GGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAAGTGGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | CCCAGCTACAGACTGCACAGGCCTCAGCCCCTAGGTATATTAGGCTTTTCTGGGACTGGGCATCTATGTTaGCATGCTCCCTCCGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: PSYRLHRPQPLGILGFSGTGHLC*HAPSGQ Trigger: TTGTCCGGAGGGAGCATGCCAACATAGATGCCCAGT...CCCAGAAAAGCCTAATATACCTAGGGGCTGAGGCCTGTGCAGTCTGTAGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR TCA 90 bp | CCCAGCTACAGACTGCACAGGCCTCAGCCCCTAGGTATATTAGGCTTTTCTGGGCACCTTGGAGAAGTCTaGCTGCATGCAGGAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSYRLHRPQPLGILGFSGHLGEV*LHAGEE Trigger: TTCTTCTCCTGCATGCAGTCAGACTTCTCCAAGGTG...CCCAGAAAAGCCTAATATACCTAGGGGCTGAGGCCTGTGCAGTCTGTAGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR TCA 90 bp | ACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTCACCTTGGAGAAGTCTaGCTGCATGCAGGAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TNSWQVGPQEREPSTHFVHLGEV*LHAGEE Trigger: TTCTTCTCCTGCATGCAGTCAGACTTCTCCAAGGTG...AACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR GCA 90 bp | GAGATCCCACAAGGCCCCACCCCCTTGGGTGAAGTTCTATTTGTAGAGTCCAGCAGAAGTCTGACTGCATaGAGGAGAAGAAGCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: EIPQGPTPLGEVLFVESSRSLTA*RRRSAM Trigger: CATCGCGCTTCTTCTCCTGCATGCAGTCAGACTTCT...GCTGGACTCTACAAATAGAACTTCACCCAAGGGGGTGGGGCCTTGTGGGATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CCA 90 bp | TTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACAAGGCCCTCAAAGATGGCCTCTaGGTAAGGAAGGTGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: FVGGRELAGLQAQRSHKALKDGL*VRKVVL Trigger: AAGTACCACCTTCCTTACCCAGAGGCCATCTTTGAG...GGCCTTGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CCA 90 bp | AGGCTATGGTGGTTAGAGGCTATGGTGGTTAGAGGCCCCAGCTACAGACTGCACGACACTGCTCACACCTaGGAGTTGCTTCTGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLWWLEAMVVRGPSYRLHDTAHT*ELLLRR Trigger: TCTTCTCAGAAGCAACTCCCAGGTGTGAGCAGTGTC...GTGCAGTCTGTAGCTGGGGCCTCTAACCACCATAGCCTCTAACCACCATAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CCA 90 bp | GAGATCCCACAAGGCCCCACCCCCTTGGGTGAAGTTCTATTTGTAGAGTCCAGCAGGAAGGGGTCCGTCTaGCCTGTCTTTTCCTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: EIPQGPTPLGEVLFVESSRKGSV*PVFSLL Trigger: TAACAAGGAAAAGACAGGCCAGACGGACCCCTTCCT...GCTGGACTCTACAAATAGAACTTCACCCAAGGGGGTGGGGCCTTGTGGGATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CCA 90 bp | TGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGGCAGACCCTGTAAGCCTTCTTaGAGTCAAAATCCATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WQVGPQEREPSTHFVGGRPCKPS*SQNPCH Trigger: GTGGCATGGATTTTGACTCCAAGAAGGCTTACAGGG...TCTGCCTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGGCAGAGAGTTGGCCTGGGAGTTGCTTCTaGGAAGATCTTCTCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WVPRKGSLVPTLLEAESWPGSCF*EDLLFH Trigger: ATGAAAGAGAAGATCTTCTCAGAAGCAACTCCCAGG...CCAACTCTCTGCCTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR GCA 90 bp | TTTGATTTAGCCATAGGCCCCCTGAAAACAATAGAGAAATGCCTTATTCTGGCAAGGGAGGCGAAGGGCTaGACCTGCAGGGAGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FDLAIGPLKTIEKCLILAREAKG*TCREVP Trigger: GGGCACCTCCCTGCAGGTGCAGCCCTTCGCCTCCCT...TGCCAGAATAAGGCATTTCTCTATTGTTTTCAGGGGGCCTATGGCTAAATCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTACAGACTGCACAGGCCTCAGCCCCTAGGTATATTAGGCTTTTCTGGGCTCAAAGATGGCCTCTaGGTAAGGAAGGTGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: PSYRLHRPQPLGILGFSGLKDGL*VRKVVL Trigger: AAGTACCACCTTCCTTACCCAGAGGCCATCTTTGAG...CCCAGAAAAGCCTAATATACCTAGGGGCTGAGGCCTGTGCAGTCTGTAGCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | GAGATCCCACAAGGCCCCACCCCCTTGGGTGAAGTTCTATTTGTAGAGTCCAGCCCCTGTAAGCCTTCTTaGAGTCAAAATCCATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EIPQGPTPLGEVLFVESSPCKPS*SQNPCH Trigger: GTGGCATGGATTTTGACTCCAAGAAGGCTTACAGGG...GCTGGACTCTACAAATAGAACTTCACCCAAGGGGGTGGGGCCTTGTGGGATCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | CCCAGCTACAGACTGCACAGGCCTCAGCCCCTAGGTATATTAGGCTTTTCTGGGCCCTGTAAGCCTTCTTaGAGTCAAAATCCATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSYRLHRPQPLGILGFSGPCKPS*SQNPCH Trigger: GTGGCATGGATTTTGACTCCAAGAAGGCTTACAGGG...CCCAGAAAAGCCTAATATACCTAGGGGCTGAGGCCTGTGCAGTCTGTAGCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | AAGAACGAAGGGTCTTTGAGCTCACACAAGCTGCATGTTAAGAGGGCCCAGTGCACTGGGCATCTATGTTaGCATGCTCCCTCCGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KNEGSLSSHKLHVKRAQCTGHLC*HAPSGQ Trigger: TTGTCCGGAGGGAGCATGCCAACATAGATGCCCAGT...GCACTGGGCCCTCTTAACATGCAGCTTGTGTGAGCTCAAAGACCCTTCGTTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR TCA 90 bp | ACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTCCTGGGAGTTGCTTCTaGGAAGATCTTCTCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TNSWQVGPQEREPSTHFVPGSCF*EDLLFH Trigger: ATGAAAGAGAAGATCTTCTCAGAAGCAACTCCCAGG...AACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTACAGACTGCACAGGCCTCAGCCCCTAGGTATATTAGGCTTTTCTGGGATAGAAGTCTGACTGCATaGAGGAGAAGAAGCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: QLQTAQASAPRYIRLFWDRSLTA*RRRSAM Trigger: CATCGCGCTTCTTCTCCTGCATGCAGTCAGACTTCT...ATCCCAGAAAAGCCTAATATACCTAGGGGCTGAGGCCTGTGCAGTCTGTAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | AAGAACGAAGGGTCTTTGAGCTCACACAAGCTGCATGTTAAGAGGGCCCAGTGCGACACTGCTCACACCTaGGAGTTGCTTCTGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNEGSLSSHKLHVKRAQCDTAHT*ELLLRR Trigger: TCTTCTCAGAAGCAACTCCCAGGTGTGAGCAGTGTC...GCACTGGGCCCTCTTAACATGCAGCTTGTGTGAGCTCAAAGACCCTTCGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTACAGACTGCACAGGCCTCAGCCCCTAGGTATATTAGGCTTTTCTGGGATCTCAAAGATGGCCTCTaGGTAAGGAAGGTGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: QLQTAQASAPRYIRLFWDLKDGL*VRKVVL Trigger: AAGTACCACCTTCCTTACCCAGAGGCCATCTTTGAG...ATCCCAGAAAAGCCTAATATACCTAGGGGCTGAGGCCTGTGCAGTCTGTAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CCA 90 bp | CAGCTACAGACTGCACAGGCCTCAGCCCCTAGGTATATTAGGCTTTTCTGGGATCCCTGTAAGCCTTCTTaGAGTCAAAATCCATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLQTAQASAPRYIRLFWDPCKPS*SQNPCH Trigger: GTGGCATGGATTTTGACTCCAAGAAGGCTTACAGGG...ATCCCAGAAAAGCCTAATATACCTAGGGGCTGAGGCCTGTGCAGTCTGTAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR TCA 90 bp | TTTGATTTAGCCATAGGCCCCCTGAAAACAATAGAGAAATGCCTTATTCTGGCAGGCCCAGGGTCTGGGTaGATAAATTCCTCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FDLAIGPLKTIEKCLILAGPGSG*INSSGS Trigger: ACTTCCTGAGGAATTTATTCACCCAGACCCTGGGCC...TGCCAGAATAAGGCATTTCTCTATTGTTTTCAGGGGGCCTATGGCTAAATCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 |
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| CDS-3UTR GCA 90 bp | TTTGATTTAGCCATAGGCCCCCTGAAAACAATAGAGAAATGCCTTATTCTGGCATGGAGTCAAAATCCATaGCACCTCCCAGGCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FDLAIGPLKTIEKCLILAWSQNP*HLPGPS Trigger: TGATGGGCCTGGGAGGTGGCATGGATTTTGACTCCA...TGCCAGAATAAGGCATTTCTCTATTGTTTTCAGGGGGCCTATGGCTAAATCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CAA 90 bp | TGCTCATCCACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCGTCCTGGCCGCCTCCTaGGCAGGCGGTGGGGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: CSSTNSWQVGPQEREPSTVLAAS*AGGGDF Trigger: AAAGTCCCCACCGCCTGCCAAGGAGGCGGCCAGGAC...GGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CAA 90 bp | TTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACAAGGCCGTCCTGGCCGCCTCCTaGGCAGGCGGTGGGGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: FVGGRELAGLQAQRSHKAVLAAS*AGGGDF Trigger: AAAGTCCCCACCGCCTGCCAAGGAGGCGGCCAGGAC...GGCCTTGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS GCA 90 bp | CTGGGGTTGGGGGCCTGTGACCCTGACTGGGCATCTATGTTGGCATaGTCCCTCCGGACAAGGTCTTCCAGTTCCTTCCATCCGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGLGACDPDWASMLA*SLRTRSSSSFHPRR Trigger: CCTCCTCGGATGGAAGGAACTGGAAGACCTTGTCCGGAGGGAGCATGCCAACATAGATGCCCAGTCAGGGTCACAGGCCCCCAACCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155327.8 |
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| CDS-3UTR CAA 90 bp | GGTCTCTTGCTCATCCACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCACCAAACAGATGACCTaGCGGCAGCGCTCGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GLLLIHQQLASGSPGKGATKQMT*RQRSLC Trigger: GCAGAGCGAGCGCTGCCGCAAGGTCATCTGTTTGGT...GGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCAAGAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 |
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| CDS-3UTR CAA 90 bp | AGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCACAAGGCCCCACCCCCTTGGGTGACTGGGCATCTATGTaGGCATGCTCCCTCCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RVGRPSGSEIPQGPTPLGDWASM*ACSLRT Trigger: TGTCCGGAGGGAGCATGCCAACATAGATGCCCAGTC...ACCCAAGGGGGTGGGGCCTTGTGGGATCTCTGAGCCTGAAGGCCTGCCAACTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CAA 90 bp | TGCTCATCCACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCATGGTAGTGCTGGGGTaGGGGGCCTGTGACCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: CSSTNSWQVGPQEREPSTMVVLG*GACDPD Trigger: GTCAGGGTCACAGGCCCCCAACCCCAGCACTACCAT...GGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS-3UTR CAA 90 bp | CCTTCAGGCTCAGAGATCCCACAAGGCCCCACCCCCTTGGGTGAAGTTCTATTTGTCCTGGCCGCCTCCTaGGCAGGCGGTGGGGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: PSGSEIPQGPTPLGEVLFVLAAS*AGGGDF Trigger: AAAGTCCCCACCGCCTGCCAAGGAGGCGGCCAGGAC...AAATAGAACTTCACCCAAGGGGGTGGGGCCTTGTGGGATCTCTGAGCCTGAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS GCA 90 bp | CTGGGGTTGGGGGCCTGTGACCCTGACTGGGCATCTATGTTGGCATaGTCCCTCCGGACAAGGTCTTCCAGTTCCTTCTTCCATCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGLGACDPDWASMLA*SLRTRSSSSFFHPR Trigger: CCTCGGATGGAAGAAGGAACTGGAAGACCTTGTCCGGAGGGAGCATGCCAACATAGATGCCCAGTCAGGGTCACAGGCCCCCAACCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000170068.9 |
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| CDS-3UTR CAA 90 bp | GTACCCACTTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCATGGTAGTGCTGGGGTaGGGGGCCTGTGACCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VPTLLEAESWQAFRLRDPMVVLG*GACDPD Trigger: GTCAGGGTCACAGGCCCCCAACCCCAGCACTACCAT...GGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAAGTGGGTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | TGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGGCAGAGAGTTGGATGGTAGTGCTGGGGTaGGGGGCCTGTGACCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: WVPRKGSLVPTLLEAESWMVVLG*GACDPD Trigger: GTCAGGGTCACAGGCCCCCAACCCCAGCACTACCAT...CCAACTCTCTGCCTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS CCA 90 bp | CTGGGTAAGGAAGGTGGTACTTCTCCAGGTTTGCATAGAGGCCAGTaGACGGGGAGCGGAAGTCAGGGATACCCGCGGACGTGGAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: LGKEGGTSPGLHRGQ*TGSGSQGYPRTWRF Trigger: GAATCTCCACGTCCGCGGGTATCCCTGACTTCCGCTCCCCGTCCACTGGCCTCTATGCAAACCTGGAGAAGTACCACCTTCCTTACCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | CAGCTACAGACTGCACAGGCCTCAGCCCCTAGGTATATTAGGCTTTTCTGGGATGTCCTGGCCGCCTCCTaGGCAGGCGGTGGGGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: QLQTAQASAPRYIRLFWDVLAAS*AGGGDF Trigger: AAAGTCCCCACCGCCTGCCAAGGAGGCGGCCAGGAC...ATCCCAGAAAAGCCTAATATACCTAGGGGCTGAGGCCTGTGCAGTCTGTAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS TCA 90 bp | CCAGCCCATCGTGTATTCTTTTCTGCAGGAGGTGTTGACACAGTGTaGTGTGTAGAAGGTGCCGTGGGCCTCCACCAGGTCCTGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PAHRVFFSAGGVDTV*CVEGAVGLHQVLGL Trigger: GAGCCCCAGGACCTGGTGGAGGCCCACGGCACCTTCTACACATCACACTGTGTCAACACCTCCTGCAGAAAAGAATACACGATGGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS GCA 90 bp | CTCAAAGATGGCCTCTGGGTAAGGAAGGTGGTACTTCTCCAGGTTTaGATAGAGGCCAGTGGACGGGGAGCGGAAGTCAGGGATACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LKDGLWVRKVVLLQV*IEASGRGAEVRDTR Trigger: GCGGGTATCCCTGACTTCCGCTCCCCGTCCACTGGCCTCTATGCAAACCTGGAGAAGTACCACCTTCCTTACCCAGAGGCCATCTTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | CCTTCAGGCTCAGAGATCCCACAAGGCCCCACCCCCTTGGGTGAAGTTCTATTTACCAAACAGATGACCTaGCGGCAGCGCTCGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSGSEIPQGPTPLGEVLFTKQMT*RQRSLC Trigger: GCAGAGCGAGCGCTGCCGCAAGGTCATCTGTTTGGT...AAATAGAACTTCACCCAAGGGGGTGGGGCCTTGTGGGATCTCTGAGCCTGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 |
||
| CDS-3UTR CAA 90 bp | GGTCTCTTGCTCATCCACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTGGCCTGTCTTTTCCTaGTTAATGAGCAGCCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLLLIHQQLASGSPGKGAWPVFS*LMSSRG Trigger: CCCACGGCTGCTCATTAACAAGGAAAAGACAGGCCA...GGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCAAGAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | GTACCCACTTTGTTGGAGGCAGAGAGTTGGCAGGCCTTCAGGCTCAGAGATCCCGACTGGGCATCTATGTaGGCATGCTCCCTCCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: VPTLLEAESWQAFRLRDPDWASM*ACSLRT Trigger: TGTCCGGAGGGAGCATGCCAACATAGATGCCCAGTC...GGGATCTCTGAGCCTGAAGGCCTGCCAACTCTCTGCCTCCAACAAAGTGGGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS CCA 90 bp | CTTGATCACAGTCACCCAGCCAGGCCACGTCCCTGTAAGCCTTCTTaGAGTCAAAATCCATGCCACCTCCCAGGCCCATCATCATGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LDHSHPARPRPCKPS*SQNPCHLPGPSSCP Trigger: TGGGCATGATGATGGGCCTGGGAGGTGGCATGGATTTTGACTCCAAGAAGGCTTACAGGGACGTGGCCTGGCTGGGTGACTGTGATCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | TGCTCATCCACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCATGAGGAGGTCCACCTaGGAGAAGTCTGACTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: CSSTNSWQVGPQEREPSTMRRST*EKSDCM Trigger: CATGCAGTCAGACTTCTCCAAGGTGGACCTCCTCAT...GGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGTGGATGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | AGGCTATGGTGGTTAGAGGCTATGGTGGTTAGAGGCCCCAGCTACAGACTGCACGACTGGGCATCTATGTaGGCATGCTCCCTCCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RLWWLEAMVVRGPSYRLHDWASM*ACSLRT Trigger: TGTCCGGAGGGAGCATGCCAACATAGATGCCCAGTC...GTGCAGTCTGTAGCTGGGGCCTCTAACCACCATAGCCTCTAACCACCATAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | ACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGACTGGGCATCTATGTaGGCATGCTCCCTCCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: TNSWQVGPQEREPSTHFVDWASM*ACSLRT Trigger: TGTCCGGAGGGAGCATGCCAACATAGATGCCCAGTC...AACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | CAGCTACAGACTGCACAGGCCTCAGCCCCTAGGTATATTAGGCTTTTCTGGGATATGGTAGTGCTGGGGTaGGGGGCCTGTGACCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QLQTAQASAPRYIRLFWDMVVLG*GACDPD Trigger: GTCAGGGTCACAGGCCCCCAACCCCAGCACTACCAT...ATCCCAGAAAAGCCTAATATACCTAGGGGCTGAGGCCTGTGCAGTCTGTAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | TGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGGCAGAGAGTTGGTGTTCCTCTTTCTCTTaGGTCCTGGCCGCCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WVPRKGSLVPTLLEAESWCSSFS*VLAASL Trigger: CAAGGAGGCGGCCAGGACCAAAGAGAAAGAGGAACA...CCAACTCTCTGCCTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | TGGTGGTTAGAGGCTATGGTGGTTAGAGGCCCCAGCTACAGACTGCACAGGCCTTGTTCCTCTTTCTCTTaGGTCCTGGCCGCCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WWLEAMVVRGPSYRLHRPCSSFS*VLAASL Trigger: CAAGGAGGCGGCCAGGACCAAAGAGAAAGAGGAACA...AGGCCTGTGCAGTCTGTAGCTGGGGCCTCTAACCACCATAGCCTCTAACCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS TCA 90 bp | CGTCTAGAAGACGCTCCTTTTGGGAACCCAGGCCCAGGGTCTGGGTaGATAAATTCCTCAGGAAGTCCATCTCTGCCTCTCCACCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLEDAPFGNPGPGSG*INSSGSPSLPLHQW Trigger: CCACTGGTGGAGAGGCAGAGATGGACTTCCTGAGGAATTTATTCACCCAGACCCTGGGCCTGGGTTCCCAAAAGGAGCGTCTTCTAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072965.5 |
||
| CDS CCA 90 bp | CGTGTCACTCCTTCGAGGGTCAGCTCGTCTAGAAGACGCTCCTTTTaGGAACCCAGGCCCAGGGTCTGGGTGAATAAATTCCTCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RVTPSRVSSSRRRSF*EPRPRVWVNKFLRK Trigger: CTTCCTGAGGAATTTATTCACCCAGACCCTGGGCCTGGGTTCCCAAAAGGAGCGTCTTCTAGACGAGCTGACCCTCGAAGGAGTGACACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGGCAGAGAGTTGGATGAGGAGGTCCACCTaGGAGAAGTCTGACTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: WVPRKGSLVPTLLEAESWMRRST*EKSDCM Trigger: CATGCAGTCAGACTTCTCCAAGGTGGACCTCCTCAT...CCAACTCTCTGCCTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | AGGCTATGGTGGTTAGAGGCTATGGTGGTTAGAGGCCCCAGCTACAGACTGCACTGTTCCTCTTTCTCTTaGGTCCTGGCCGCCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RLWWLEAMVVRGPSYRLHCSSFS*VLAASL Trigger: CAAGGAGGCGGCCAGGACCAAAGAGAAAGAGGAACA...GTGCAGTCTGTAGCTGGGGCCTCTAACCACCATAGCCTCTAACCACCATAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | ACCAACAGCTGGCAAGTGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTTGTTCCTCTTTCTCTTaGGTCCTGGCCGCCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TNSWQVGPQEREPSTHFVCSSFS*VLAASL Trigger: CAAGGAGGCGGCCAGGACCAAAGAGAAAGAGGAACA...AACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCACTTGCCAGCTGTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS CCA 90 bp | AGCTCGTCTAGAAGACGCTCCTTTTGGGAACCCAGGCCCAGGGTCTaGGTGAATAAATTCCTCAGGAAGTCCATCTCTGCCTCTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSRRRSFWEPRPRV*VNKFLRKSISASPP Trigger: TGGTGGAGAGGCAGAGATGGACTTCCTGAGGAATTTATTCACCCAGACCCTGGGCCTGGGTTCCCAAAAGGAGCGTCTTCTAGACGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072965.5 |
||
| CDS-3UTR CAA 90 bp | TGGGTCCCCAGGAAAGGGAGCCTAGTACCCACTTTGTTGGAGGCAGAGAGTTGGGCTCACACCTGGGAGTaGCTTCTGAGAAGATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WVPRKGSLVPTLLEAESWAHTWE*LLRRSS Trigger: AGAAGATCTTCTCAGAAGCAACTCCCAGGTGTGAGC...CCAACTCTCTGCCTCCAACAAAGTGGGTACTAGGCTCCCTTTCCTGGGGACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | CCTTCAGGCTCAGAGATCCCACAAGGCCCCACCCCCTTGGGTGAAGTTCTATTTATGAGGAGGTCCACCTaGGAGAAGTCTGACTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: PSGSEIPQGPTPLGEVLFMRRST*EKSDCM Trigger: CATGCAGTCAGACTTCTCCAAGGTGGACCTCCTCAT...AAATAGAACTTCACCCAAGGGGGTGGGGCCTTGTGGGATCTCTGAGCCTGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | GAGATCCCACAAGGCCCCACCCCCTTGGGTGAAGTTCTATTTGTAGAGTCCAGCATGAGGAGGTCCACCTaGGAGAAGTCTGACTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: EIPQGPTPLGEVLFVESSMRRST*EKSDCM Trigger: CATGCAGTCAGACTTCTCCAAGGTGGACCTCCTCAT...GCTGGACTCTACAAATAGAACTTCACCCAAGGGGGTGGGGCCTTGTGGGATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | GAGATCCCACAAGGCCCCACCCCCTTGGGTGAAGTTCTATTTGTAGAGTCCAGCTGGCCTGTCTTTTCCTaGTTAATGAGCAGCCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EIPQGPTPLGEVLFVESSWPVFS*LMSSRG Trigger: CCCACGGCTGCTCATTAACAAGGAAAAGACAGGCCA...GCTGGACTCTACAAATAGAACTTCACCCAAGGGGGTGGGGCCTTGTGGGATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | CCCAGCTACAGACTGCACAGGCCTCAGCCCCTAGGTATATTAGGCTTTTCTGGGGCTCACACCTGGGAGTaGCTTCTGAGAAGATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSYRLHRPQPLGILGFSGAHTWE*LLRRSS Trigger: AGAAGATCTTCTCAGAAGCAACTCCCAGGTGTGAGC...CCCAGAAAAGCCTAATATACCTAGGGGCTGAGGCCTGTGCAGTCTGTAGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS TCA 90 bp | TCTCTTTCATCCAGCCCATCGTGTATTCTTTTCTGCAGGAGGTGTTaGCACAGTGTGATGTGTAGAAGGTGCCGTGGGCCTCCACCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLSSSPSCILFCRRC*HSVMCRRCRGPPPG Trigger: ACCTGGTGGAGGCCCACGGCACCTTCTACACATCACACTGTGTCAACACCTCCTGCAGAAAAGAATACACGATGGGCTGGATGAAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS CCA 90 bp | GGGTTCCGGATGTTTCTTGAAGTAGCTGATCTCAAAGATGGCCTCTaGGTAAGGAAGGTGGTACTTCTCCAGGTTTGCATAGAGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GFRMFLEVADLKDGL*VRKVVLLQVCIEAS Trigger: ACTGGCCTCTATGCAAACCTGGAGAAGTACCACCTTCCTTACCCAGAGGCCATCTTTGAGATCAGCTACTTCAAGAAACATCCGGAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS-3UTR CAA 90 bp | TTTGATTTAGCCATAGGCCCCCTGAAAACAATAGAGAAATGCCTTATTCTGGCAACCAAACAGATGACCTaGCGGCAGCGCTCGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FDLAIGPLKTIEKCLILATKQMT*RQRSLC Trigger: GCAGAGCGAGCGCTGCCGCAAGGTCATCTGTTTGGT...TGCCAGAATAAGGCATTTCTCTATTGTTTTCAGGGGGCCTATGGCTAAATCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTTCTAATAAGCAAGGTCTCTTGCTCATCCACCAACAGCTGGCAAGTGGGTTGGCCTGTCTTTTCCTaGTTAATGAGCAGCCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LFLISKVSCSSTNSWQVGWPVFS*LMSSRG Trigger: CCCACGGCTGCTCATTAACAAGGAAAAGACAGGCCA...ACCCACTTGCCAGCTGTTGGTGGATGAGCAAGAGACCTTGCTTATTAGAAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS TCA 90 bp | GGAAGGTTCTCACCGAAAAACACGATATCAGGCTTTACCACACTCTaGCACTGCTCACACCTGGGAGTTGCTTCTGAGAAGATCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRFSPKNTISGFTTL*HCSHLGVASEKIFS Trigger: AGAGAAGATCTTCTCAGAAGCAACTCCCAGGTGTGAGCAGTGTCAGAGTGTGGTAAAGCCTGATATCGTGTTTTTCGGTGAGAACCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS TCA 90 bp | AGGCTTTACCACACTCTGACACTGCTCACACCTGGGAGTTGCTTCTaGGAAGATCTTCTCTTTCATCCAGCCCATCGTGTATTCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RLYHTLTLLTPGSCF*EDLLFHPAHRVFFS Trigger: AGAAAAGAATACACGATGGGCTGGATGAAAGAGAAGATCTTCTCAGAAGCAACTCCCAGGTGTGAGCAGTGTCAGAGTGTGGTAAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS TCA 72 bp | CCGCGGACGTGGAGATTCCGGCTCCCACCAAACAGATaGCCTTGCGGCAGCGCTCGCTCTGCATGTAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PRTWRFRLPPNR*PCGSARSACSV Trigger: CACGCTACATGCAGAGCGAGCGCTGCCGCAAGGTCATCTGTTTGGTGGGAGCCGGAATCTCCACGTCCGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 |
||
| CDS GCA 72 bp | GGTGCCTTGCTGATGAGGGAGGCGAAGGGCTGCACCTaGAGGGAGGTGCCCATGATGATGAGGAGGTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GALLMREAKGCT*REVPMMMRRST Trigger: GGTGGACCTCCTCATCATCATGGGCACCTCCCTGCAGGTGCAGCCCTTCGCCTCCCTCATCAGCAAGGCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS CAA 90 bp | GTCTTTTCCTTGTTAATGAGCAGCCGTGGGGTGGCTAGTGGTGCCTaGCTGATGAGGGAGGCGAAGGGCTGCACCTGCAGGGAGGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VFSLLMSSRGVASGA*LMREAKGCTCREVP Trigger: GGGCACCTCCCTGCAGGTGCAGCCCTTCGCCTCCCTCATCAGCAAGGCACCACTAGCCACCCCACGGCTGCTCATTAACAAGGAAAAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS CCA 72 bp | GAAGGTGGTACTTCTCCAGGTTTGCATAGAGGCCAGTaGACGGGGAGCGGAAGTCAGGGATACCCGCGGACG | + |
|
Preference number: 6 (lower is better) Translates to: EGGTSPGLHRGQ*TGSGSQGYPRT Trigger: CGTCCGCGGGTATCCCTGACTTCCGCTCCCCGTCCACTGGCCTCTATGCAAACCTGGAGAAGTACCACCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS CAA 72 bp | TTGTTAATGAGCAGCCGTGGGGTGGCTAGTGGTGCCTaGCTGATGAGGGAGGCGAAGGGCTGCACCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLMSSRGVASGA*LMREAKGCTCR Trigger: CCTGCAGGTGCAGCCCTTCGCCTCCCTCATCAGCAAGGCACCACTAGCCACCCCACGGCTGCTCATTAACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS CAA 72 bp | GGGTTGGGGGCCTGTGACCCTGACTGGGCATCTATGTaGGCATGCTCCCTCCGGACAAGGTCTTCCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GLGACDPDWASM*ACSLRTRSSSS Trigger: GGAACTGGAAGACCTTGTCCGGAGGGAGCATGCCAACATAGATGCCCAGTCAGGGTCACAGGCCCCCAACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS CAA 90 bp | GTAGTGCTGGGGTTGGGGGCCTGTGACCCTGACTGGGCATCTATGTaGGCATGCTCCCTCCGGACAAGGTCTTCCAGTTCCTTCCATCCG | + |
|
Preference number: 6 (lower is better) Translates to: VVLGLGACDPDWASM*ACSLRTRSSSSFHP Trigger: CGGATGGAAGGAACTGGAAGACCTTGTCCGGAGGGAGCATGCCAACATAGATGCCCAGTCAGGGTCACAGGCCCCCAACCCCAGCACTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155327.8 |
||
| CDS GCA 72 bp | GGCCTCTGGGTAAGGAAGGTGGTACTTCTCCAGGTTTaGATAGAGGCCAGTGGACGGGGAGCGGAAGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLWVRKVVLLQV*IEASGRGAEVR Trigger: CCTGACTTCCGCTCCCCGTCCACTGGCCTCTATGCAAACCTGGAGAAGTACCACCTTCCTTACCCAGAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS CCA 72 bp | CCCAGGCCCATCATCATGCCCAGGAAGGGGTCCGTCTaGCCTGTCTTTTCCTTGTTAATGAGCAGCCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PRPIIMPRKGSV*PVFSLLMSSRG Trigger: CCCACGGCTGCTCATTAACAAGGAAAAGACAGGCCAGACGGACCCCTTCCTGGGCATGATGATGGGCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS CCA 72 bp | GGTTGGGGGCCTGTGACCCTGACTGGGCATCTATGTTaGCATGCTCCCTCCGGACAAGGTCTTCCAGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GWGPVTLTGHLC*HAPSGQGLPVP Trigger: AGGAACTGGAAGACCTTGTCCGGAGGGAGCATGCCAACATAGATGCCCAGTCAGGGTCACAGGCCCCCAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS CAA 90 bp | GTAGTGCTGGGGTTGGGGGCCTGTGACCCTGACTGGGCATCTATGTaGGCATGCTCCCTCCGGACAAGGTCTTCCAGTTCCTTCTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VVLGLGACDPDWASM*ACSLRTRSSSSFFH Trigger: ATGGAAGAAGGAACTGGAAGACCTTGTCCGGAGGGAGCATGCCAACATAGATGCCCAGTCAGGGTCACAGGCCCCCAACCCCAGCACTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000170068.9 |
||
| CDS GCA 72 bp | GGGGCCTGTGACCCTGACTGGGCATCTATGTTGGCATaGTCCCTCCGGACAAGGTCTTCCAGTTCCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GACDPDWASMLA*SLRTRSSSSFF Trigger: GAAGAAGGAACTGGAAGACCTTGTCCGGAGGGAGCATGCCAACATAGATGCCCAGTCAGGGTCACAGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000170068.9 |
||
| CDS GCA 72 bp | GGGGCCTGTGACCCTGACTGGGCATCTATGTTGGCATaGTCCCTCCGGACAAGGTCTTCCAGTTCCTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GACDPDWASMLA*SLRTRSSSSFH Trigger: ATGGAAGGAACTGGAAGACCTTGTCCGGAGGGAGCATGCCAACATAGATGCCCAGTCAGGGTCACAGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155327.8 |
||
| CDS CCA 72 bp | AGTCACCCAGCCAGGCCACGTCCCTGTAAGCCTTCTTaGAGTCAAAATCCATGCCACCTCCCAGGCCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SHPARPRPCKPS*SQNPCHLPGPS Trigger: TGATGGGCCTGGGAGGTGGCATGGATTTTGACTCCAAGAAGGCTTACAGGGACGTGGCCTGGCTGGGTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS CAA 72 bp | TGGCCTCTGGGTAAGGAAGGTGGTACTTCTCCAGGTTaGCATAGAGGCCAGTGGACGGGGAGCGGAAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: WPLGKEGGTSPG*HRGQWTGSGSQ Trigger: CTGACTTCCGCTCCCCGTCCACTGGCCTCTATGCAAACCTGGAGAAGTACCACCTTCCTTACCCAGAGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS CAA 90 bp | TCTCAAAGATGGCCTCTGGGTAAGGAAGGTGGTACTTCTCCAGGTTaGCATAGAGGCCAGTGGACGGGGAGCGGAAGTCAGGGATACCCG | + |
|
Preference number: 6 (lower is better) Translates to: SQRWPLGKEGGTSPG*HRGQWTGSGSQGYP Trigger: CGGGTATCCCTGACTTCCGCTCCCCGTCCACTGGCCTCTATGCAAACCTGGAGAAGTACCACCTTCCTTACCCAGAGGCCATCTTTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
||
| CDS TCA 72 bp | GACGCTCCTTTTGGGAACCCAGGCCCAGGGTCTGGGTaGATAAATTCCTCAGGAAGTCCATCTCTGCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: DAPFGNPGPGSG*INSSGSPSLPL Trigger: GAGAGGCAGAGATGGACTTCCTGAGGAATTTATTCACCCAGACCCTGGGCCTGGGTTCCCAAAAGGAGCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072965.5 |
||
| CDS CCA 72 bp | AATTCCTCAGGAAGTCCATCTCTGCCTCTCCACCAGTaGCTCCTCCCTCAGTGTCCGAGTCTGAATCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: NSSGSPSLPLHQ*LLPQCPSLNPE Trigger: CTCAGGATTCAGACTCGGACACTGAGGGAGGAGCCACTGGTGGAGAGGCAGAGATGGACTTCCTGAGGAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072965.5 |
||
| CDS TCA 72 bp | CGTGTATTCTTTTCTGCAGGAGGTGTTGACACAGTGTaGTGTGTAGAAGGTGCCGTGGGCCTCCACCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: RVFFSAGGVDTV*CVEGAVGLHQV Trigger: GACCTGGTGGAGGCCCACGGCACCTTCTACACATCACACTGTGTCAACACCTCCTGCAGAAAAGAATACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS CCA 72 bp | AGAAGACGCTCCTTTTGGGAACCCAGGCCCAGGGTCTaGGTGAATAAATTCCTCAGGAAGTCCATCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RRRSFWEPRPRV*VNKFLRKSISA Trigger: GGCAGAGATGGACTTCCTGAGGAATTTATTCACCCAGACCCTGGGCCTGGGTTCCCAAAAGGAGCGTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072965.5 |
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| CDS TCA 72 bp | CACACTCTGACACTGCTCACACCTGGGAGTTGCTTCTaGGAAGATCTTCTCTTTCATCCAGCCCATCGTGTA | + |
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Preference number: 6 (lower is better) Translates to: HTLTLLTPGSCF*EDLLFHPAHRV Trigger: TACACGATGGGCTGGATGAAAGAGAAGATCTTCTCAGAAGCAACTCCCAGGTGTGAGCAGTGTCAGAGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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| CDS CCA 72 bp | TATCAGGCTTTACCACACTCTGACACTGCTCACACCTaGGAGTTGCTTCTGAGAAGATCTTCTCTTTCATCC | + |
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Preference number: 6 (lower is better) Translates to: YQALPHSDTAHT*ELLLRRSSLSS Trigger: GGATGAAAGAGAAGATCTTCTCAGAAGCAACTCCCAGGTGTGAGCAGTGTCAGAGTGTGGTAAAGCCTGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072965.5 ENSMUST00000122915.8 ENSMUST00000155327.8 ENSMUST00000170068.9 |
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