Pregenerated sensors for SIRPB1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074677Ensembl transcript IDs: ENSMUST00000050623.11, ENSMUST00000108349.2, ENSMUST00000108350.8, ENSMUST00000108352.9, ENSMUST00000108354.8, ENSMUST00000148194.8
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGAGCACACATGACAGAGGCAACAGAGGGGTCTGTTATATAGCTTaGATAGAGTTCTCAATCTCAGGATTGATGCTTTCTAACCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: MSTHDRGNRGVCYIA*IEFSISGLMLSNLY Trigger: GTAAAGGTTAGAAAGCATCAATCCTGAGATTGAGAACTCTATCCAAGCTATATAACAGACCCCTCTGTTGCCTCTGTCATGTGTGCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| 3UTR-3UTR GCA 90 bp | AGCACACATGACAGAGGCAACAGAGGGGTCTGTTATATAGCTTGGATAGAGTTCGTGTGTGTGTGTGTGTaGACAAACAGGTTGTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: STHDRGNRGVCYIAWIEFVCVCV*TNRLSG Trigger: ACCTGACAACCTGTTTGTGCACACACACACACACAC...GAACTCTATCCAAGCTATATAACAGACCCCTCTGTTGCCTCTGTCATGTGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| 3UTR CAA 90 bp | AGATCACATACTGTGTGTGTGTGTGTGTGTGTGTGCACAAACAGGTaGTCAGGTGGCCTGTTGAAATTTCACTCCATTAGGACACTATAT | + |
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Preference number: 2 (lower is better) Translates to: RSHTVCVCVCVCTNR*SGGLLKFHSIRTLY Trigger: ATATAGTGTCCTAATGGAGTGAAATTTCAACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACACACACAGTATGTGATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| 3UTR-3UTR GCA 90 bp | TATATAGCTTGGATAGAGTTCTCAATCTCAGGATTGATGCTTTCTAACCTTTACGTGTGTGTGTGTGTGTaGACAAACAGGTTGTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: YIAWIEFSISGLMLSNLYVCVCV*TNRLSG Trigger: ACCTGACAACCTGTTTGTGCACACACACACACACAC...GTAAAGGTTAGAAAGCATCAATCCTGAGATTGAGAACTCTATCCAAGCTATATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAATTTTCCTTATACCCTAGTGATAGCAGTGCTCCAATGGATATTTGATTTTGAAGGGGCAAGATACTaGAATTTGATGATACCTTCC | + |
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Preference number: 2 (lower is better) Translates to: ANFPYTLVIAVLQWIFDFEGARY*NLMIPS Trigger: GGAAGGTATCATCAAATTCCAGTATCTTGCCCCTTC...AAAATCAAATATCCATTGGAGCACTGCTATCACTAGGGTATAAGGAAAATTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| 3UTR CAA 90 bp | AGAGGGGTCTGTTATATAGCTTGGATAGAGTTCTCAATCTCAGGATaGATGCTTTCTAACCTTTACATTTTTAACTGGCATATTCATAGA | + |
|
Preference number: 2 (lower is better) Translates to: RGVCYIAWIEFSISG*MLSNLYIFNWHIHR Trigger: TCTATGAATATGCCAGTTAAAAATGTAAAGGTTAGAAAGCATCAATCCTGAGATTGAGAACTCTATCCAAGCTATATAACAGACCCCTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAATATCATGATTTACCTGAGCACACACTGTGGACTATATTTGCACTGTATGGTCTGTTATATAGCTTaGATAGAGTTCTCAATCTCA | + |
|
Preference number: 2 (lower is better) Translates to: ENIMIYLSTHCGLYLHCMVCYIA*IEFSIS Trigger: TGAGATTGAGAACTCTATCCAAGCTATATAACAGAC...CATACAGTGCAAATATAGTCCACAGTGTGTGCTCAGGTAAATCATGATATTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| 3UTR TCA 72 bp | ACACTGTGGACTATATTTGCACTGTATGAGCACACATaGCAGAGGCAACAGAGGGGTCTGTTATATAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: TLWTIFALYEHT*QRQQRGLLYSL Trigger: CAAGCTATATAACAGACCCCTCTGTTGCCTCTGTCATGTGTGCTCATACAGTGCAAATATAGTCCACAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| 3UTR CCA 72 bp | CATGACAGAGGCAACAGAGGGGTCTGTTATATAGCTTaGATAGAGTTCTCAATCTCAGGATTGATGCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: HDRGNRGVCYIA*IEFSISGLMLS Trigger: AGAAAGCATCAATCCTGAGATTGAGAACTCTATCCAAGCTATATAACAGACCCCTCTGTTGCCTCTGTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| 3UTR-3UTR CAA 90 bp | GAAAATATCATGATTTACCTGAGCACACACTGTGGACTATATTTGCACTGTATGGTGTGCACAAACAGGTaGTCAGGTGGCCTGTTGAAA | + |
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Preference number: 3 (lower is better) Translates to: ENIMIYLSTHCGLYLHCMVCTNR*SGGLLK Trigger: TTTCAACAGGCCACCTGACAACCTGTTTGTGCACAC...CATACAGTGCAAATATAGTCCACAGTGTGTGCTCAGGTAAATCATGATATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| 3UTR-3UTR CAA 90 bp | TATATAGCTTGGATAGAGTTCTCAATCTCAGGATTGATGCTTTCTAACCTTTACCAAAAGTCACTGGAGTaGAGGATCTATTTTTGTTGT | + |
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Preference number: 3 (lower is better) Translates to: YIAWIEFSISGLMLSNLYQKSLE*RIYFCC Trigger: ACAACAAAAATAGATCCTCAACTCCAGTGACTTTTG...GTAAAGGTTAGAAAGCATCAATCCTGAGATTGAGAACTCTATCCAAGCTATATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR TCA 90 bp | ATACTGTGTGTGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTAACAGCAGGACACAGTaGGGAATGTGGGTCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: ILCVCVCVCAQTGCQVACNSRTQ*GMWVQA Trigger: TGCCTGGACCCACATTCCTCACTGTGTCCTGCTGTT...ACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACACACACAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR GCA 90 bp | ATACTGTGTGTGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTGGAGGGATGTCACTGTaGAGTTCAGAGTGGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: ILCVCVCVCAQTGCQVACGGMSL*SSEWLT Trigger: GGTCAGCCACTCTGAACTGCACAGTGACATCCCTCC...ACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACACACACAGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR TCA 90 bp | ATACTGTGTGTGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTGATCCACTTCACAGATaGTCTGAGAGCGGACATCCC | + |
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Preference number: 4 (lower is better) Translates to: ILCVCVCVCAQTGCQVACDPLHR*SESGHP Trigger: GGGATGTCCGCTCTCAGATCATCTGTGAAGTGGATC...ACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACACACACAGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTTGAAATTTCAGGAGGGATGTCACTGTaGAGTTCAGAGTGGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVHKQVVRWPVEISGGMSL*SSEWLT Trigger: GGTCAGCCACTCTGAACTGCACAGTGACATCCCTCC...TGAAATTTCAACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR TCA 90 bp | AGCACACATGACAGAGGCAACAGAGGGGTCTGTTATATAGCTTGGATAGAGTTCCTCCATGTCAGGCTCTaGTGGTCCTCTCTGGAACTT | + |
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Preference number: 4 (lower is better) Translates to: STHDRGNRGVCYIAWIEFLHVRL*WSSLEL Trigger: AAGTTCCAGAGAGGACCATCAGAGCCTGACATGGAG...GAACTCTATCCAAGCTATATAACAGACCCCTCTGTTGCCTCTGTCATGTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTTGAAATTTCACTCCATGTCAGGCTCTaGTGGTCCTCTCTGGAACTT | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVHKQVVRWPVEISLHVRL*WSSLEL Trigger: AAGTTCCAGAGAGGACCATCAGAGCCTGACATGGAG...TGAAATTTCAACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR TCA 90 bp | AGCACACATGACAGAGGCAACAGAGGGGTCTGTTATATAGCTTGGATAGAGTTCGATCCACTTCACAGATaGTCTGAGAGCGGACATCCC | + |
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Preference number: 4 (lower is better) Translates to: STHDRGNRGVCYIAWIEFDPLHR*SESGHP Trigger: GGGATGTCCGCTCTCAGATCATCTGTGAAGTGGATC...GAACTCTATCCAAGCTATATAACAGACCCCTCTGTTGCCTCTGTCATGTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTTGAAATTTGACATAATGGTGGGGTaGAGACCTCACCAGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCTNRLSGGLLKFDIMVG*RPHQTW Trigger: CCAAGTCTGGTGAGGTCTTCACCCCACCATTATGTC...AAATTTCAACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTTGAAATTTCATACCATTGTTGGCTaGTGGCTGATCTCCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCTNRLSGGLLKFHTIVG*WLISRV Trigger: CACCCTGGAGATCAGCCAGCAGCCAACAATGGTATG...AAATTTCAACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR CCA 90 bp | ATACTGTGTGTGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTGATCTCCAGGGTGGGTaGAACTTGAATGAACTCAGA | + |
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Preference number: 4 (lower is better) Translates to: ILCVCVCVCAQTGCQVACDLQGG*NLNELR Trigger: TCTGAGTTCATTCAAGTTCCACCCACCCTGGAGATC...ACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACACACACAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR CCA 90 bp | AGCACACATGACAGAGGCAACAGAGGGGTCTGTTATATAGCTTGGATAGAGTTCGGTTCCAACACCACCTaGACTGTGCTGGAAACTCTA | + |
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Preference number: 4 (lower is better) Translates to: STHDRGNRGVCYIAWIEFGSNTT*TVLETL Trigger: TAGAGTTTCCAGCACAGTCCAGGTGGTGTTGGAACC...GAACTCTATCCAAGCTATATAACAGACCCCTCTGTTGCCTCTGTCATGTGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTTGAAATTTGGGCTCGATCTAAAGTaGCATGATCCACTTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCTNRLSGGLLKFGLDLK*HDPLHR Trigger: TCTGTGAAGTGGATCATGTCACTTTAGATCGAGCCC...AAATTTCAACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTTGAAATTTCAGATCTCCAGGGTGGGTaGAACTTGAATGAACTCAGA | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVHKQVVRWPVEISDLQGG*NLNELR Trigger: TCTGAGTTCATTCAAGTTCCACCCACCCTGGAGATC...TGAAATTTCAACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR CCA 90 bp | ATACTGTGTGTGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTGGTCACCTGAAACCTTaGAGGATAGAACTTCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: ILCVCVCVCAQTGCQVACGHLKP*RIELLY Trigger: ATACAGAAGTTCTATCCTCCAAGGTTTCAGGTGACC...ACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACACACACAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR TCA 90 bp | AGCACACATGACAGAGGCAACAGAGGGGTCTGTTATATAGCTTGGATAGAGTTCACCGGAGACCATAGGTaGAGATGGTTTAGCAAATAC | + |
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Preference number: 4 (lower is better) Translates to: STHDRGNRGVCYIAWIEFTGDHR*RWFSKY Trigger: GTATTTGCTAAACCATCTTCACCTATGGTCTCCGGT...GAACTCTATCCAAGCTATATAACAGACCCCTCTGTTGCCTCTGTCATGTGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTTGAAATTTACCGGAGACCATAGGTaGAGATGGTTTAGCAAATAC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCTNRLSGGLLKFTGDHR*RWFSKY Trigger: GTATTTGCTAAACCATCTTCACCTATGGTCTCCGGT...AAATTTCAACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTTGAAATTTGGTTTCAATGACTTCTaGTTGTCCATCATGCTCAAC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCTNRLSGGLLKFGFNDF*LSIMLN Trigger: GTTGAGCATGATGGACAAGCAGAAGTCATTGAAACC...AAATTTCAACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR CCA 90 bp | AGCACACATGACAGAGGCAACAGAGGGGTCTGTTATATAGCTTGGATAGAGTTCGGTCACCTGAAACCTTaGAGGATAGAACTTCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: STHDRGNRGVCYIAWIEFGHLKP*RIELLY Trigger: ATACAGAAGTTCTATCCTCCAAGGTTTCAGGTGACC...GAACTCTATCCAAGCTATATAACAGACCCCTCTGTTGCCTCTGTCATGTGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR TCA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTAAACAGCAGGACACAGTaGGGAATGTGGGTCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: NSICTALKFWDSNTYAEVNSRTQ*GMWVQA Trigger: TGCCTGGACCCACATTCCTCACTGTGTCCTGCTGTT...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 |
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| CDS-3UTR TCA 90 bp | TATATAGCTTGGATAGAGTTCTCAATCTCAGGATTGATGCTTTCTAACCTTTACAACAGCAGGACACAGTaGGGAATGTGGGTCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: YIAWIEFSISGLMLSNLYNSRTQ*GMWVQA Trigger: TGCCTGGACCCACATTCCTCACTGTGTCCTGCTGTT...GTAAAGGTTAGAAAGCATCAATCCTGAGATTGAGAACTCTATCCAAGCTATATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR TCA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTAACAGCAGGACACAGTaGGGAATGTGGGTCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: TALKFWDSNTYAEVQQEINSRTQ*GMWVQA Trigger: TGCCTGGACCCACATTCCTCACTGTGTCCTGCTGTT...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 |
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| CDS-3UTR GCA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTGGAGGGATGTCACTGTaGAGTTCAGAGTGGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: TALKFWDSNTYAEVQQEIGGMSL*SSEWLT Trigger: GGTCAGCCACTCTGAACTGCACAGTGACATCCCTCC...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 |
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| CDS-3UTR GCA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTAGGAGGGATGTCACTGTaGAGTTCAGAGTGGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: NSICTALKFWDSNTYAEVGGMSL*SSEWLT Trigger: GGTCAGCCACTCTGAACTGCACAGTGACATCCCTCC...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 |
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| CDS-3UTR CCA 90 bp | AGCACACATGACAGAGGCAACAGAGGGGTCTGTTATATAGCTTGGATAGAGTTCAATGATTTAACAGGTTaGATCACCTTCAGCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: STHDRGNRGVCYIAWIEFNDLTG*ITFSSL Trigger: GAGAGAGCTGAAGGTGATCCAACCTGTTAAATCATT...GAACTCTATCCAAGCTATATAACAGACCCCTCTGTTGCCTCTGTCATGTGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTTGAAATTTCAAATGATTTAACAGGTTaGATCACCTTCAGCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVHKQVVRWPVEISNDLTG*ITFSSL Trigger: GAGAGAGCTGAAGGTGATCCAACCTGTTAAATCATT...TGAAATTTCAACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| 3UTR CAA 72 bp | GTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTaGAAATTTCACTCCATTAGGACACTATATTTAGGA | + |
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Preference number: 4 (lower is better) Translates to: VCVCTNRLSGGL*KFHSIRTLYLG Trigger: TCCTAAATATAGTGTCCTAATGGAGTGAAATTTCAACAGGCCACCTGACAACCTGTTTGTGCACACACACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| 3UTR CAA 72 bp | ATCATGATTTACCTGAGCACACACTGTGGACTATATTaGCACTGTATGAGCACACATGACAGAGGCAACAGA | + |
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Preference number: 4 (lower is better) Translates to: IMIYLSTHCGLY*HCMSTHDRGNR Trigger: TCTGTTGCCTCTGTCATGTGTGCTCATACAGTGCAAATATAGTCCACAGTGTGTGCTCAGGTAAATCATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR TCA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTTTTGTCCTACACCCTTaGACCACCTTATGGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: TALKFWDSNTYAEVQQEIFVLHP*TTLWAP Trigger: TGGGGCCCATAAGGTGGTTCAAGGGTGTAGGACAAA...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 |
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| CDS-3UTR TCA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTCTCCATGTCAGGCTCTaGTGGTCCTCTCTGGAACTT | + |
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Preference number: 4 (lower is better) Translates to: TALKFWDSNTYAEVQQEILHVRL*WSSLEL Trigger: AAGTTCCAGAGAGGACCATCAGAGCCTGACATGGAG...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 |
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| CDS-3UTR TCA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACTCCATGTCAGGCTCTaGTGGTCCTCTCTGGAACTT | + |
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Preference number: 4 (lower is better) Translates to: NSICTALKFWDSNTYAEVLHVRL*WSSLEL Trigger: AAGTTCCAGAGAGGACCATCAGAGCCTGACATGGAG...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 |
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| CDS-3UTR TCA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTAGATCCACTTCACAGATaGTCTGAGAGCGGACATCCC | + |
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Preference number: 4 (lower is better) Translates to: NSICTALKFWDSNTYAEVDPLHR*SESGHP Trigger: GGGATGTCCGCTCTCAGATCATCTGTGAAGTGGATC...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
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| CDS-3UTR TCA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTGATCCACTTCACAGATaGTCTGAGAGCGGACATCCC | + |
|
Preference number: 4 (lower is better) Translates to: TALKFWDSNTYAEVQQEIDPLHR*SESGHP Trigger: GGGATGTCCGCTCTCAGATCATCTGTGAAGTGGATC...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR TCA 90 bp | TATATAGCTTGGATAGAGTTCTCAATCTCAGGATTGATGCTTTCTAACCTTTACGACATAATGGTGGGGTaGAGACCTCACCAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YIAWIEFSISGLMLSNLYDIMVG*RPHQTW Trigger: CCAAGTCTGGTGAGGTCTTCACCCCACCATTATGTC...GTAAAGGTTAGAAAGCATCAATCCTGAGATTGAGAACTCTATCCAAGCTATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
||
| CDS-3UTR GCA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACATACCATTGTTGGCTaGTGGCTGATCTCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NSICTALKFWDSNTYAEVHTIVG*WLISRV Trigger: CACCCTGGAGATCAGCCAGCAGCCAACAATGGTATG...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR GCA 90 bp | TATATAGCTTGGATAGAGTTCTCAATCTCAGGATTGATGCTTTCTAACCTTTACCATACCATTGTTGGCTaGTGGCTGATCTCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YIAWIEFSISGLMLSNLYHTIVG*WLISRV Trigger: CACCCTGGAGATCAGCCAGCAGCCAACAATGGTATG...GTAAAGGTTAGAAAGCATCAATCCTGAGATTGAGAACTCTATCCAAGCTATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
||
| CDS-3UTR CCA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACGCGGAAAGAATCCATaGGATCTGCATGTAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSICTALKFWDSNTYAEVRGKNP*DLHVKA Trigger: GGCCTTTACATGCAGATCCCATGGATTCTTTCCGCG...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTGGTTCCAACACCACCTaGACTGTGCTGGAAACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TALKFWDSNTYAEVQQEIGSNTT*TVLETL Trigger: TAGAGTTTCCAGCACAGTCCAGGTGGTGTTGGAACC...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR CCA 90 bp | TTTACTAGCAAATTTTCCTTATACCCTAGTGATAGCAGTGCTCCAATGGATATTGGTTCCAACACCACCTaGACTGTGCTGGAAACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FTSKFSLYPSDSSAPMDIGSNTT*TVLETL Trigger: TAGAGTTTCCAGCACAGTCCAGGTGGTGTTGGAACC...AATATCCATTGGAGCACTGCTATCACTAGGGTATAAGGAAAATTTGCTAGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
||
| CDS-3UTR CCA 90 bp | GAAAATATCATGATTTACCTGAGCACACACTGTGGACTATATTTGCACTGTATGCCATCATGCTCAACCTaGCATGTCACTACCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ENIMIYLSTHCGLYLHCMPSCST*HVTTMF Trigger: GAACATGGTAGTGACATGCCAGGTTGAGCATGATGG...CATACAGTGCAAATATAGTCCACAGTGTGTGCTCAGGTAAATCATGATATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
||
| CDS-3UTR TCA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTGGGCTCGATCTAAAGTaGCATGATCCACTTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TALKFWDSNTYAEVQQEIGLDLK*HDPLHR Trigger: TCTGTGAAGTGGATCATGTCACTTTAGATCGAGCCC...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR TCA 90 bp | TTTACTAGCAAATTTTCCTTATACCCTAGTGATAGCAGTGCTCCAATGGATATTGGGCTCGATCTAAAGTaGCATGATCCACTTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTSKFSLYPSDSSAPMDIGLDLK*HDPLHR Trigger: TCTGTGAAGTGGATCATGTCACTTTAGATCGAGCCC...AATATCCATTGGAGCACTGCTATCACTAGGGTATAAGGAAAATTTGCTAGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
||
| CDS-3UTR TCA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTAGGGCTCGATCTAAAGTaGCATGATCCACTTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSICTALKFWDSNTYAEVGLDLK*HDPLHR Trigger: TCTGTGAAGTGGATCATGTCACTTTAGATCGAGCCC...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR GCA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTAACACCACCTGGACTGTaGTGGAAACTCTATAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSICTALKFWDSNTYAEVTPPGL*WKLYRR Trigger: TCTCCTATAGAGTTTCCAGCACAGTCCAGGTGGTGT...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR CCA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTAGATCTCCAGGGTGGGTaGAACTTGAATGAACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSICTALKFWDSNTYAEVDLQGG*NLNELR Trigger: TCTGAGTTCATTCAAGTTCCACCCACCCTGGAGATC...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTGATCTCCAGGGTGGGTaGAACTTGAATGAACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TALKFWDSNTYAEVQQEIDLQGG*NLNELR Trigger: TCTGAGTTCATTCAAGTTCCACCCACCCTGGAGATC...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR CCA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACCATCATGCTCAACCTaGCATGTCACTACCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSICTALKFWDSNTYAEVPSCST*HVTTMF Trigger: GAACATGGTAGTGACATGCCAGGTTGAGCATGATGG...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR CCA 90 bp | TATATAGCTTGGATAGAGTTCTCAATCTCAGGATTGATGCTTTCTAACCTTTACCCATCATGCTCAACCTaGCATGTCACTACCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YIAWIEFSISGLMLSNLYPSCST*HVTTMF Trigger: GAACATGGTAGTGACATGCCAGGTTGAGCATGATGG...GTAAAGGTTAGAAAGCATCAATCCTGAGATTGAGAACTCTATCCAAGCTATATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTCCATCATGCTCAACCTaGCATGTCACTACCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TALKFWDSNTYAEVQQEIPSCST*HVTTMF Trigger: GAACATGGTAGTGACATGCCAGGTTGAGCATGATGG...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR TCA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTACCGGAGACCATAGGTaGAGATGGTTTAGCAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: TALKFWDSNTYAEVQQEITGDHR*RWFSKY Trigger: GTATTTGCTAAACCATCTTCACCTATGGTCTCCGGT...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR TCA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTAACCGGAGACCATAGGTaGAGATGGTTTAGCAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: NSICTALKFWDSNTYAEVTGDHR*RWFSKY Trigger: GTATTTGCTAAACCATCTTCACCTATGGTCTCCGGT...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR TCA 90 bp | GAAAATATCATGATTTACCTGAGCACACACTGTGGACTATATTTGCACTGTATGCGATCTAAAGTGACATaGTCCACTTCACAGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: ENIMIYLSTHCGLYLHCMRSKVT*STSQMI Trigger: GATCATCTGTGAAGTGGATCATGTCACTTTAGATCG...CATACAGTGCAAATATAGTCCACAGTGTGTGCTCAGGTAAATCATGATATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
||
| CDS-3UTR TCA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTCGATCTAAAGTGACATaGTCCACTTCACAGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: TALKFWDSNTYAEVQQEIRSKVT*STSQMI Trigger: GATCATCTGTGAAGTGGATCATGTCACTTTAGATCG...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR TCA 90 bp | GCAAATTTTCCTTATACCCTAGTGATAGCAGTGCTCCAATGGATATTTGATTTTCGATCTAAAGTGACATaGTCCACTTCACAGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: ANFPYTLVIAVLQWIFDFRSKVT*STSQMI Trigger: GATCATCTGTGAAGTGGATCATGTCACTTTAGATCG...AAAATCAAATATCCATTGGAGCACTGCTATCACTAGGGTATAAGGAAAATTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
||
| CDS-3UTR TCA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACGATCTAAAGTGACATaGTCCACTTCACAGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: NSICTALKFWDSNTYAEVRSKVT*STSQMI Trigger: GATCATCTGTGAAGTGGATCATGTCACTTTAGATCG...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTGGTTTCAATGACTTCTaGTTGTCCATCATGCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TALKFWDSNTYAEVQQEIGFNDF*LSIMLN Trigger: GTTGAGCATGATGGACAAGCAGAAGTCATTGAAACC...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR GCA 90 bp | GCAAATTTTCCTTATACCCTAGTGATAGCAGTGCTCCAATGGATATTTGATTTTGGTTTCAATGACTTCTaGTTGTCCATCATGCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ANFPYTLVIAVLQWIFDFGFNDF*LSIMLN Trigger: GTTGAGCATGATGGACAAGCAGAAGTCATTGAAACC...AAAATCAAATATCCATTGGAGCACTGCTATCACTAGGGTATAAGGAAAATTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
||
| CDS-3UTR GCA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTAGGTTTCAATGACTTCTaGTTGTCCATCATGCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: NSICTALKFWDSNTYAEVGFNDF*LSIMLN Trigger: GTTGAGCATGATGGACAAGCAGAAGTCATTGAAACC...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTGGTCACCTGAAACCTTaGAGGATAGAACTTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TALKFWDSNTYAEVQQEIGHLKP*RIELLY Trigger: ATACAGAAGTTCTATCCTCCAAGGTTTCAGGTGACC...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR CCA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTAGGTCACCTGAAACCTTaGAGGATAGAACTTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NSICTALKFWDSNTYAEVGHLKP*RIELLY Trigger: ATACAGAAGTTCTATCCTCCAAGGTTTCAGGTGACC...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR CCA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTAAATGATTTAACAGGTTaGATCACCTTCAGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSICTALKFWDSNTYAEVNDLTG*ITFSSL Trigger: GAGAGAGCTGAAGGTGATCCAACCTGTTAAATCATT...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTAATGATTTAACAGGTTaGATCACCTTCAGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TALKFWDSNTYAEVQQEINDLTG*ITFSSL Trigger: GAGAGAGCTGAAGGTGATCCAACCTGTTAAATCATT...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTTTAACAGCAGTATTTTaGATCCAAGGAGCACAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TALKFWDSNTYAEVQQEILTAVF*IQGAQL Trigger: TAGCTGTGCTCCTTGGATCCAAAATACTGCTGTTAA...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 |
||
| CDS-3UTR CCA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTATTAACAGCAGTATTTTaGATCCAAGGAGCACAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: NSICTALKFWDSNTYAEVLTAVF*IQGAQL Trigger: TAGCTGTGCTCCTTGGATCCAAAATACTGCTGTTAA...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 |
||
| CDS TCA 90 bp | GGGGTGAAGACCTCACCAGACTTGGTAGCAGTACCTTTCACTCTCTaGTGTTCAGTGACCACCACAGTATGGGTTTCAATGACTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GVKTSPDLVAVPFTL*CSVTTTVWVSMTSA Trigger: AGCAGAAGTCATTGAAACCCATACTGTGGTGGTCACTGAACATCAGAGAGTGAAAGGTACTGCTACCAAGTCTGGTGAGGTCTTCACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
||
| CDS-3UTR CAA 90 bp | CATACTGTGTGTGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTATCAAGAGTCGACTTaGTCCTACACCCTTGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: HTVCVCVCVCTNRLSGGLYQEST*SYTLEP Trigger: TGGTTCAAGGGTGTAGGACAAAGTCGACTCTTGATA...CAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACACACACAGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
||
| CDS TCA 90 bp | TTTCCATTCGGAGCCTCAGACTTGGTAGCAGTACCTTTCACTCTCTaGTGTTCAGTGACCACCACAGTATGGGTTTCAATGACTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FPFGASDLVAVPFTL*CSVTTTVWVSMTSA Trigger: AGCAGAAGTCATTGAAACCCATACTGTGGTGGTCACTGAACATCAGAGAGTGAAAGGTACTGCTACCAAGTCTGAGGCTCCGAATGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148194.8 |
||
| CDS GCA 90 bp | TCTCTGATGTTCAGTGACCACCACAGTATGGGTTTCAATGACTTCTaGTTGTCCATCATGCTCAACCTGGCATGTCACTACCATGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLMFSDHHSMGFNDF*LSIMLNLACHYHVL Trigger: GAGAACATGGTAGTGACATGCCAGGTTGAGCATGATGGACAAGCAGAAGTCATTGAAACCCATACTGTGGTGGTCACTGAACATCAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000050623.11 ENSMUST00000108349.2 ENSMUST00000108350.8 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTTGAAATTTCATATCAAGAGTCGACTTaGTCCTACACCCTTGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVHKQVVRWPVEISYQEST*SYTLEP Trigger: TGGTTCAAGGGTGTAGGACAAAGTCGACTCTTGATA...TGAAATTTCAACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
||
| CDS GCA 90 bp | TATTTTGGATCCAAGGAGCACAGCTACAGGTATTTTAGCAATACCTaGCGTCTTCAGTTCTTTCACTCTCTGATGTTCAGTGACCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: YFGSKEHSYRYFSNT*RLQFFHSLMFSDHH Trigger: GTGGTGGTCACTGAACATCAGAGAGTGAAAGAACTGAAGACGGCAGGTATTGCTAAAATACCTGTAGCTGTGCTCCTTGGATCCAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050623.11 |
||
| CDS-3UTR CAA 90 bp | ATACTGTGTGTGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTATAGAACTTCTGTATTaGGCAGGTGACAATTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: ILCVCVCVCAQTGCQVACIELLY*AGDNYH Trigger: GTGATAATTGTCACCTGCCAAATACAGAAGTTCTAT...ACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACACACACAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGCACAAACAGGTTGTCAGGTGGCCTGTTGAAATTTCAATAGAACTTCTGTATTaGGCAGGTGACAATTATCAC | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVHKQVVRWPVEISIELLY*AGDNYH Trigger: GTGATAATTGTCACCTGCCAAATACAGAAGTTCTAT...TGAAATTTCAACAGGCCACCTGACAACCTGTTTGTGCACACACACACACACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTTATCAAGAGTCGACTTaGTCCTACACCCTTGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: TALKFWDSNTYAEVQQEIYQEST*SYTLEP Trigger: TGGTTCAAGGGTGTAGGACAAAGTCGACTCTTGATA...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 |
||
| CDS-3UTR CAA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTATATCAAGAGTCGACTTaGTCCTACACCCTTGAACCA | + |
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Preference number: 5 (lower is better) Translates to: NSICTALKFWDSNTYAEVYQEST*SYTLEP Trigger: TGGTTCAAGGGTGTAGGACAAAGTCGACTCTTGATA...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 |
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| CDS-3UTR CAA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTATCTCATTTCCATTCTaGAACCACTTCAGCGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: TALKFWDSNTYAEVQQEIISFPF*NHFSVR Trigger: CCTCACGCTGAAGTGGTTCAAGAATGGAAATGAGAT...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
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| CDS-3UTR CAA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTATTCAATGACTTCTGCTaGTCCATCATGCTCAACCTG | + |
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Preference number: 5 (lower is better) Translates to: NSICTALKFWDSNTYAEVFNDFC*SIMLNL Trigger: CAGGTTGAGCATGATGGACAAGCAGAAGTCATTGAA...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
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| CDS-3UTR CAA 90 bp | TATATAGCTTGGATAGAGTTCTCAATCTCAGGATTGATGCTTTCTAACCTTTACTTCAATGACTTCTGCTaGTCCATCATGCTCAACCTG | + |
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Preference number: 5 (lower is better) Translates to: YIAWIEFSISGLMLSNLYFNDFC*SIMLNL Trigger: CAGGTTGAGCATGATGGACAAGCAGAAGTCATTGAA...GTAAAGGTTAGAAAGCATCAATCCTGAGATTGAGAACTCTATCCAAGCTATATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS-3UTR CAA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTTTCAATGACTTCTGCTaGTCCATCATGCTCAACCTG | + |
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Preference number: 5 (lower is better) Translates to: TALKFWDSNTYAEVQQEIFNDFC*SIMLNL Trigger: CAGGTTGAGCATGATGGACAAGCAGAAGTCATTGAA...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
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| CDS-3UTR CAA 90 bp | ACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTATAGAACTTCTGTATTaGGCAGGTGACAATTATCAC | + |
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Preference number: 5 (lower is better) Translates to: TALKFWDSNTYAEVQQEIIELLY*AGDNYH Trigger: GTGATAATTGTCACCTGCCAAATACAGAAGTTCTAT...AATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
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| CDS-3UTR CAA 90 bp | AATTCAATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTAATAGAACTTCTGTATTaGGCAGGTGACAATTATCAC | + |
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Preference number: 5 (lower is better) Translates to: NSICTALKFWDSNTYAEVIELLY*AGDNYH Trigger: GTGATAATTGTCACCTGCCAAATACAGAAGTTCTAT...TACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050623.11 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
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| CDS CAA 90 bp | CCATACCATTGTTGGCTGCTGGCTGATCTCCAGGGTGGGTGGAACTaGAATGAACTCAGAGATGTGAGCAATCCCTCTGAGAGGGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: PYHCWLLADLQGGWN*NELRDVSNPSERGS Trigger: CGAGCCCCTCTCAGAGGGATTGCTCACATCTCTGAGTTCATTCAAGTTCCACCCACCCTGGAGATCAGCCAGCAGCCAACAATGGTATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000050623.11 ENSMUST00000108349.2 ENSMUST00000108350.8 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
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| CDS TCA 72 bp | ACGAGTATATCAAGAGTCGACTTTGTCCTACACCCTTaGACCACCTTATGGGCCCCACAGGGAGGAGGGATG | + |
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Preference number: 6 (lower is better) Translates to: TSISRVDFVLHP*TTLWAPQGGGM Trigger: CATCCCTCCTCCCTGTGGGGCCCATAAGGTGGTTCAAGGGTGTAGGACAAAGTCGACTCTTGATATACTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050623.11 ENSMUST00000108349.2 ENSMUST00000108350.8 ENSMUST00000108352.9 ENSMUST00000108354.8 |
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| CDS CAA 72 bp | GCGTTCTCCTGTGAACGAGTATATCAAGAGTCGACTTaGTCCTACACCCTTGAACCACCTTATGGGCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: AFSCERVYQEST*SYTLEPPYGPH Trigger: GTGGGGCCCATAAGGTGGTTCAAGGGTGTAGGACAAAGTCGACTCTTGATATACTCGTTCACAGGAGAACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050623.11 ENSMUST00000108349.2 ENSMUST00000108350.8 ENSMUST00000108352.9 ENSMUST00000108354.8 |
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| CDS TCA 72 bp | GGAGCCTCAGACTTGGTAGCAGTACCTTTCACTCTCTaGTGTTCAGTGACCACCACAGTATGGGTTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: GASDLVAVPFTL*CSVTTTVWVSM Trigger: CATTGAAACCCATACTGTGGTGGTCACTGAACATCAGAGAGTGAAAGGTACTGCTACCAAGTCTGAGGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148194.8 |
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| CDS CAA 72 bp | CCACCTGGACTGTGCTGGAAACTCTATAGGAGACACTaGTTTCTTCGGGTTCCACAGAAGTTTCCAAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: PPGLCWKLYRRH*FLRVPQKFPSE Trigger: CTCACTTGGAAACTTCTGTGGAACCCGAAGAAACAAGTGTCTCCTATAGAGTTTCCAGCACAGTCCAGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000050623.11 ENSMUST00000108349.2 ENSMUST00000108350.8 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
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| CDS CAA 90 bp | CTGATGTTCAGTGACCACCACAGTATGGGTTTCAATGACTTCTGCTaGTCCATCATGCTCAACCTGGCATGTCACTACCATGTTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LMFSDHHSMGFNDFC*SIMLNLACHYHVLL Trigger: GAGGAGAACATGGTAGTGACATGCCAGGTTGAGCATGATGGACAAGCAGAAGTCATTGAAACCCATACTGTGGTGGTCACTGAACATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000050623.11 ENSMUST00000108349.2 ENSMUST00000108350.8 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
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| CDS TCA 72 bp | ACCTCACCAGACTTGGTAGCAGTACCTTTCACTCTCTaGTGTTCAGTGACCACCACAGTATGGGTTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: TSPDLVAVPFTL*CSVTTTVWVSM Trigger: CATTGAAACCCATACTGTGGTGGTCACTGAACATCAGAGAGTGAAAGGTACTGCTACCAAGTCTGGTGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108349.2 ENSMUST00000108350.8 |
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| CDS GCA 72 bp | TTCAGTGACCACCACAGTATGGGTTTCAATGACTTCTaGTTGTCCATCATGCTCAACCTGGCATGTCACTAC | + |
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Preference number: 6 (lower is better) Translates to: FSDHHSMGFNDF*LSIMLNLACHY Trigger: GTAGTGACATGCCAGGTTGAGCATGATGGACAAGCAGAAGTCATTGAAACCCATACTGTGGTGGTCACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000050623.11 ENSMUST00000108349.2 ENSMUST00000108350.8 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
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| CDS CAA 72 bp | AGTGACCACCACAGTATGGGTTTCAATGACTTCTGCTaGTCCATCATGCTCAACCTGGCATGTCACTACCAT | + |
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Preference number: 6 (lower is better) Translates to: SDHHSMGFNDFC*SIMLNLACHYH Trigger: ATGGTAGTGACATGCCAGGTTGAGCATGATGGACAAGCAGAAGTCATTGAAACCCATACTGTGGTGGTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000050623.11 ENSMUST00000108349.2 ENSMUST00000108350.8 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
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| CDS TCA 72 bp | TTAGCAATACCTGCCGTCTTCAGTTCTTTCACTCTCTaGTGTTCAGTGACCACCACAGTATGGGTTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: LAIPAVFSSFTL*CSVTTTVWVSM Trigger: CATTGAAACCCATACTGTGGTGGTCACTGAACATCAGAGAGTGAAAGAACTGAAGACGGCAGGTATTGCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050623.11 |
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| CDS TCA 72 bp | TTCAGTTCAGACTTGGTAGCAGTACCTTTCACTCTCTaGTGTTCAGTGACCACCACAGTATGGGTTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: FSSDLVAVPFTL*CSVTTTVWVSM Trigger: CATTGAAACCCATACTGTGGTGGTCACTGAACATCAGAGAGTGAAAGGTACTGCTACCAAGTCTGAACTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108352.9 |
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| CDS TCA 72 bp | GAAACCTTGGAGGATAGAACTTCTGTATTTGGCAGGTaGCAATTATCACATTCCATACCATTGTTGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: ETLEDRTSVFGR*QLSHSIPLLAA Trigger: AGCAGCCAACAATGGTATGGAATGTGATAATTGTCACCTGCCAAATACAGAAGTTCTATCCTCCAAGGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000050623.11 ENSMUST00000108349.2 ENSMUST00000108350.8 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
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| CDS CAA 72 bp | GGTCACCTGAAACCTTGGAGGATAGAACTTCTGTATTaGGCAGGTGACAATTATCACATTCCATACCATTGT | + |
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Preference number: 6 (lower is better) Translates to: GHLKPWRIELLY*AGDNYHIPYHC Trigger: ACAATGGTATGGAATGTGATAATTGTCACCTGCCAAATACAGAAGTTCTATCCTCCAAGGTTTCAGGTGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000050623.11 ENSMUST00000108349.2 ENSMUST00000108350.8 ENSMUST00000108352.9 ENSMUST00000108354.8 ENSMUST00000148194.8 |
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