Pregenerated sensors for SIRPB1B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095028

Ensembl transcript IDs: ENSMUST00000091319.7, ENSMUST00000192382.6, ENSMUST00000195778.3

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CACATTCCATACCATTGTTGGCTGCTGGCTGATCTCCAGGGTGGGTaGAACTTGAATGAACTCAGAGATGTGAGCAATCCCTCTGAGAGG	+
Preference number: 5 (lower is better) Translates to: HIPYHCWLLADLQGG*NLNELRDVSNPSER Trigger: CCTCTCAGAGGGATTGCTCACATCTCTGAGTTCATTCAAGTTCCACCCACCCTGGAGATCAGCCAGCAGCCAACAATGGTATGGAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091319.7 ENSMUST00000192382.6
CDS TCA 90 bp	CCTGCCGTCTTCAGTTCAGACTTGGTAGCAGTACCTTTCACTCTCTaGTGTTCAGTGACCACCACAGTATGGGTTTCAATGACTTCTGCT	+
Preference number: 5 (lower is better) Translates to: PAVFSSDLVAVPFTL*CSVTTTVWVSMTSA Trigger: AGCAGAAGTCATTGAAACCCATACTGTGGTGGTCACTGAACATCAGAGAGTGAAAGGTACTGCTACCAAGTCTGAACTGAAGACGGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192382.6
CDS CCA 90 bp	CTTCTGTATTTGGCAGGTGACAATTATCACATTCCATACCATTGTTaGCTGCTGGCTGATCTCCAGGGTGGGTGGAACTTGAATGAACTC	+
Preference number: 5 (lower is better) Translates to: LLYLAGDNYHIPYHC*LLADLQGGWNLNEL Trigger: GAGTTCATTCAAGTTCCACCCACCCTGGAGATCAGCCAGCAGCCAACAATGGTATGGAATGTGATAATTGTCACCTGCCAAATACAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091319.7 ENSMUST00000192382.6
CDS CCA 90 bp	ACAGTATGGGTTTCAATGACTTCTGCTTGTCCATCATGCTCAACCTaGCATGTCACTACCATGTTCTCCTCAAGGGCAGATATGTTCACC	+
Preference number: 5 (lower is better) Translates to: TVWVSMTSACPSCST*HVTTMFSSRADMFT Trigger: GGTGAACATATCTGCCCTTGAGGAGAACATGGTAGTGACATGCCAGGTTGAGCATGATGGACAAGCAGAAGTCATTGAAACCCATACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091319.7 ENSMUST00000192382.6
CDS TCA 90 bp	ACAGGTATTTTAGCAATACCTGCCGTCTTCAGTTCTTTCACTCTCTaGTGTTCAGTGACCACCACAGTATGGGTTTCAATGACTTCTGCT	+
Preference number: 5 (lower is better) Translates to: TGILAIPAVFSSFTL*CSVTTTVWVSMTSA Trigger: AGCAGAAGTCATTGAAACCCATACTGTGGTGGTCACTGAACATCAGAGAGTGAAAGAACTGAAGACGGCAGGTATTGCTAAAATACCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091319.7
CDS GCA 72 bp	AAGAATCCATGGGATCTGCATGTAAAGGTCACTGTCTaGTTAGGGACAGCTCTGGCTGCAGGACCGGAGACC	+
Preference number: 6 (lower is better) Translates to: KNPWDLHVKVTV*LGTALAAGPET Trigger: GGTCTCCGGTCCTGCAGCCAGAGCTGTCCCTAAGCAGACAGTGACCTTTACATGCAGATCCCATGGATTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091319.7 ENSMUST00000192382.6 ENSMUST00000195778.3
CDS CCA 72 bp	TTGGCAGGTGACAATTATCACATTCCATACCATTGTTaGCTGCTGGCTGATCTCCAGGGTGGGTGGAACTTG	+
Preference number: 6 (lower is better) Translates to: LAGDNYHIPYHC*LLADLQGGWNL Trigger: CAAGTTCCACCCACCCTGGAGATCAGCCAGCAGCCAACAATGGTATGGAATGTGATAATTGTCACCTGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091319.7 ENSMUST00000192382.6
CDS CCA 72 bp	GTTTCAATGACTTCTGCTTGTCCATCATGCTCAACCTaGCATGTCACTACCATGTTCTCCTCAAGGGCAGAT	+
Preference number: 6 (lower is better) Translates to: VSMTSACPSCST*HVTTMFSSRAD Trigger: ATCTGCCCTTGAGGAGAACATGGTAGTGACATGCCAGGTTGAGCATGATGGACAAGCAGAAGTCATTGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091319.7 ENSMUST00000192382.6

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