Pregenerated sensors for SIRPB1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095788Ensembl transcript IDs: ENSMUST00000099201.9, ENSMUST00000192700.3, ENSMUST00000194144.3
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | CAAGAATACAATTCAATATGCACAGCTTTAAAGTTCTaGGATAGCAATACATATGCAGAGGTACAACAAGAA | + |
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Preference number: 3 (lower is better) Translates to: QEYNSICTALKF*DSNTYAEVQQE Trigger: TTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATATTGAATTGTATTCTTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR CCA 90 bp | TGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAACCCTATACCACCTTATaGGCCCCACAGGGAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: CTALKFWDSNTYAEVQQEPYTTL*APQGGG Trigger: CCCTCCTCCCTGTGGGGCCCATAAGGTGGTATAGGG...TTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR CCA 90 bp | TTAGTAGTAGTCTTCAATAGCTGCTCATTAGCACTTATTTCCATTCGGAGCCTACCCTATACCACCTTATaGGCCCCACAGGGAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: LVVVFNSCSLALISIRSLPYTTL*APQGGG Trigger: CCCTCCTCCCTGTGGGGCCCATAAGGTGGTATAGGG...TAGGCTCCGAATGGAAATAAGTGCTAATGAGCAGCTATTGAAGACTACTACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR TCA 90 bp | TGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAAAGGTCACTGTCTGCTaGGGGACAGCTCTGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: CTALKFWDSNTYAEVQQEKVTVC*GTALAA Trigger: TGCAGCCAGAGCTGTCCCTCAGCAGACAGTGACCTT...TTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR TCA 90 bp | TTAGTAGTAGTCTTCAATAGCTGCTCATTAGCACTTATTTCCATTCGGAGCCTAAAGGTCACTGTCTGCTaGGGGACAGCTCTGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LVVVFNSCSLALISIRSLKVTVC*GTALAA Trigger: TGCAGCCAGAGCTGTCCCTCAGCAGACAGTGACCTT...TAGGCTCCGAATGGAAATAAGTGCTAATGAGCAGCTATTGAAGACTACTACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR TCA 90 bp | GAGTCCTTAGTAGTAGTCTTCAATAGCTGCTCATTAGCACTTATTTCCATTCGGACCGGAGACCATAGGTaGAGATGGTTTAGCAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: ESLVVVFNSCSLALISIRTGDHR*RWFSKD Trigger: GTCCTTGCTAAACCATCTTCACCTATGGTCTCCGGT...CCGAATGGAAATAAGTGCTAATGAGCAGCTATTGAAGACTACTACTAAGGACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR GCA 90 bp | TGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAGGAGGGATGTCACTGTaGAGTTTAGAGTGGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: CTALKFWDSNTYAEVQQEGGMSL*SLEWLT Trigger: GGTCAGCCACTCTAAACTGCACAGTGACATCCCTCC...TTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR TCA 90 bp | TTAGTAGTAGTCTTCAATAGCTGCTCATTAGCACTTATTTCCATTCGGAGCCTAACCGGAGACCATAGGTaGAGATGGTTTAGCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVVVFNSCSLALISIRSLTGDHR*RWFSKD Trigger: GTCCTTGCTAAACCATCTTCACCTATGGTCTCCGGT...TAGGCTCCGAATGGAAATAAGTGCTAATGAGCAGCTATTGAAGACTACTACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR TCA 90 bp | TGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAACTCTCTGATGTTCAGTaGCCAGCACAGTATGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: CTALKFWDSNTYAEVQQELSDVQ*PAQYGF Trigger: AAACCCATACTGTGCTGGTCACTGAACATCAGAGAG...TTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR GCA 90 bp | TTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTCTGAGTGGAGGGATGTCACTGTaGAGTTTAGAGTGGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: LKFWDSNTYAEVQQEILSGGMSL*SLEWLT Trigger: GGTCAGCCACTCTAAACTGCACAGTGACATCCCTCC...ACTCAGAATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR CCA 90 bp | TTAGTAGTAGTCTTCAATAGCTGCTCATTAGCACTTATTTCCATTCGGAGCCTACGCGGAAAGAATCCATaGGATCTGCATGTAAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVVVFNSCSLALISIRSLRGKNP*DLHVKV Trigger: GACCTTTACATGCAGATCCCATGGATTCTTTCCGCG...TAGGCTCCGAATGGAAATAAGTGCTAATGAGCAGCTATTGAAGACTACTACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR TCA 90 bp | CTAATTGAGTCCTTAGTAGTAGTCTTCAATAGCTGCTCATTAGCACTTATTTCCCTCTCTGATGTTCAGTaGCCAGCACAGTATGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LIESLVVVFNSCSLALISLSDVQ*PAQYGF Trigger: AAACCCATACTGTGCTGGTCACTGAACATCAGAGAG...GGAAATAAGTGCTAATGAGCAGCTATTGAAGACTACTACTAAGGACTCAATTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR TCA 90 bp | ATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAAGTTCTTTCACTCTCTaGTGTTCAGTGACCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: ICTALKFWDSNTYAEVQQSSFTL*CSVTST Trigger: TGTGCTGGTCACTGAACATCAGAGAGTGAAAGAACT...TTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192700.3 |
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| CDS-3UTR GCA 90 bp | GAGTCCTTAGTAGTAGTCTTCAATAGCTGCTCATTAGCACTTATTTCCATTCGGGGTTTCAATGACTTCTaGTTGTTCATCATGCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ESLVVVFNSCSLALISIRGFNDF*LFIMLN Trigger: GTTGAGCATGATGAACAAGCAGAAGTCATTGAAACC...CCGAATGGAAATAAGTGCTAATGAGCAGCTATTGAAGACTACTACTAAGGACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR TCA 90 bp | CTAATTGAGTCCTTAGTAGTAGTCTTCAATAGCTGCTCATTAGCACTTATTTCCACAGAAGTTTCCAAGTaGGAGATCTCATCTCCATTC | + |
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Preference number: 4 (lower is better) Translates to: LIESLVVVFNSCSLALISTEVSK*EISSPF Trigger: GAATGGAGATGAGATCTCTCACTTGGAAACTTCTGT...GGAAATAAGTGCTAATGAGCAGCTATTGAAGACTACTACTAAGGACTCAATTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR TCA 90 bp | TGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAACAGTATGGGTTTCAATaGCTTCTGCTTGTTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: CTALKFWDSNTYAEVQQEQYGFQ*LLLVHH Trigger: ATGATGAACAAGCAGAAGTCATTGAAACCCATACTG...TTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR CCA 90 bp | GAGTCCTTAGTAGTAGTCTTCAATAGCTGCTCATTAGCACTTATTTCCATTCGGAATGATTTAACAGGTTaGATCACTTTCAGCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESLVVVFNSCSLALISIRNDLTG*ITFSSL Trigger: GAGAGAGCTGAAAGTGATCCAACCTGTTAAATCATT...CCGAATGGAAATAAGTGCTAATGAGCAGCTATTGAAGACTACTACTAAGGACTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR GCA 90 bp | ATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGGTTTCAATGACTTCTaGTTGTTCATCATGCTCAAC | + |
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Preference number: 4 (lower is better) Translates to: ICTALKFWDSNTYAEVQQGFNDF*LFIMLN Trigger: GTTGAGCATGATGAACAAGCAGAAGTCATTGAAACC...TTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR CCA 90 bp | ATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAAATGATTTAACAGGTTaGATCACTTTCAGCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: ICTALKFWDSNTYAEVQQNDLTG*ITFSSL Trigger: GAGAGAGCTGAAAGTGATCCAACCTGTTAAATCATT...TTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS CCA 90 bp | CACATTCCAAACCATTGTTGGCTGCTGGCGGATCTCCAGGGTGGGTaGAACTTGAATGAACTCAGAGATGTGAGCAATCCCTCTGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HIPNHCWLLADLQGG*NLNELRDVSNPSER Trigger: CCTCTCAGAGGGATTGCTCACATCTCTGAGTTCATTCAAGTTCCACCCACCCTGGAGATCCGCCAGCAGCCAACAATGGTTTGGAATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS TCA 90 bp | CCTGCCGTCTTCAGTTCAGACTTGGTAGCAGTACCTTTCACTCTCTaGTGTTCAGTGACCAGCACAGTATGGGTTTCAATGACTTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: PAVFSSDLVAVPFTL*CSVTSTVWVSMTSA Trigger: AGCAGAAGTCATTGAAACCCATACTGTGCTGGTCACTGAACATCAGAGAGTGAAAGGTACTGCTACCAAGTCTGAACTGAAGACGGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099201.9 |
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| CDS CCA 90 bp | CTTCTGTATTTGGCAGGTGACATTTATCACATTCCAAACCATTGTTaGCTGCTGGCGGATCTCCAGGGTGGGTGGAACTTGAATGAACTC | + |
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Preference number: 5 (lower is better) Translates to: LLYLAGDIYHIPNHC*LLADLQGGWNLNEL Trigger: GAGTTCATTCAAGTTCCACCCACCCTGGAGATCCGCCAGCAGCCAACAATGGTTTGGAATGTGATAAATGTCACCTGCCAAATACAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS GCA 90 bp | TATTTTGGATCCAAGGAGCACAGCTACAGGTATTTTAGCAATACCTaGCGTCTTCAGTTCTTTCACTCTCTGATGTTCAGTGACCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: YFGSKEHSYRYFSNT*RLQFFHSLMFSDQH Trigger: GTGCTGGTCACTGAACATCAGAGAGTGAAAGAACTGAAGACGGCAGGTATTGCTAAAATACCTGTAGCTGTGCTCCTTGGATCCAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192700.3 |
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| CDS-3UTR CAA 90 bp | GAGTCCTTAGTAGTAGTCTTCAATAGCTGCTCATTAGCACTTATTTCCATTCGGTCACATTCCAAACCATaGTTGGCTGCTGGCGGATCT | + |
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Preference number: 5 (lower is better) Translates to: ESLVVVFNSCSLALISIRSHSKP*LAAGGS Trigger: AGATCCGCCAGCAGCCAACAATGGTTTGGAATGTGA...CCGAATGGAAATAAGTGCTAATGAGCAGCTATTGAAGACTACTACTAAGGACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS TCA 90 bp | AGGTCAACTGAAAACTTGGAGGATAGAACTTCTGTATTTGGCAGGTaGCATTTATCACATTCCAAACCATTGTTGGCTGCTGGCGGATCT | + |
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Preference number: 5 (lower is better) Translates to: RSTENLEDRTSVFGR*HLSHSKPLLAAGGS Trigger: AGATCCGCCAGCAGCCAACAATGGTTTGGAATGTGATAAATGTCACCTGCCAAATACAGAAGTTCTATCCTCCAAGTTTTCAGTTGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS TCA 90 bp | ACAGGTATTTTAGCAATACCTGCCGTCTTCAGTTCTTTCACTCTCTaGTGTTCAGTGACCAGCACAGTATGGGTTTCAATGACTTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: TGILAIPAVFSSFTL*CSVTSTVWVSMTSA Trigger: AGCAGAAGTCATTGAAACCCATACTGTGCTGGTCACTGAACATCAGAGAGTGAAAGAACTGAAGACGGCAGGTATTGCTAAAATACCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192700.3 |
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| CDS-3UTR CAA 90 bp | TGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAACAGGGTGGGTGGAACTaGAATGAACTCAGAGATGTG | + |
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Preference number: 5 (lower is better) Translates to: CTALKFWDSNTYAEVQQEQGGWN*NELRDV Trigger: CACATCTCTGAGTTCATTCAAGTTCCACCCACCCTG...TTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR CAA 90 bp | CTAATTGAGTCCTTAGTAGTAGTCTTCAATAGCTGCTCATTAGCACTTATTTCCTCACATTCCAAACCATaGTTGGCTGCTGGCGGATCT | + |
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Preference number: 5 (lower is better) Translates to: LIESLVVVFNSCSLALISSHSKP*LAAGGS Trigger: AGATCCGCCAGCAGCCAACAATGGTTTGGAATGTGA...GGAAATAAGTGCTAATGAGCAGCTATTGAAGACTACTACTAAGGACTCAATTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR CAA 90 bp | TGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAATCATCATGCTCAACCTaGCATGTCACTACCATGTTC | + |
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Preference number: 5 (lower is better) Translates to: CTALKFWDSNTYAEVQQESSCST*HVTTMF Trigger: GAACATGGTAGTGACATGCAAGGTTGAGCATGATGA...TTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR CAA 90 bp | TTAGTAGTAGTCTTCAATAGCTGCTCATTAGCACTTATTTCCATTCGGAGCCTATCATCATGCTCAACCTaGCATGTCACTACCATGTTC | + |
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Preference number: 5 (lower is better) Translates to: LVVVFNSCSLALISIRSLSSCST*HVTTMF Trigger: GAACATGGTAGTGACATGCAAGGTTGAGCATGATGA...TAGGCTCCGAATGGAAATAAGTGCTAATGAGCAGCTATTGAAGACTACTACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR CAA 90 bp | GAGTCCTTAGTAGTAGTCTTCAATAGCTGCTCATTAGCACTTATTTCCATTCGGATTAACAGCAGTATTTaGGATCCAAGGAGCACAGCT | + |
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Preference number: 5 (lower is better) Translates to: ESLVVVFNSCSLALISIRINSSI*DPRSTA Trigger: AGCTGTGCTCCTTGGATCCAAAATACTGCTGTTAAT...CCGAATGGAAATAAGTGCTAATGAGCAGCTATTGAAGACTACTACTAAGGACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR CAA 90 bp | TTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAATTCTGAGTATCTCATCTCCATTCTaGAACCACTTCAGCGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LKFWDSNTYAEVQQEILSISSPF*NHFSVR Trigger: CCTCACGCTGAAGTGGTTCAAGAATGGAGATGAGAT...ACTCAGAATTTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR CAA 90 bp | CTAATTGAGTCCTTAGTAGTAGTCTTCAATAGCTGCTCATTAGCACTTATTTCCGTCTTCAGTTCAGACTaGGTAGCAGTACCTTTCACT | + |
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Preference number: 5 (lower is better) Translates to: LIESLVVVFNSCSLALISVFSSD*VAVPFT Trigger: AGTGAAAGGTACTGCTACCAAGTCTGAACTGAAGAC...GGAAATAAGTGCTAATGAGCAGCTATTGAAGACTACTACTAAGGACTCAATTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099201.9 |
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| CDS-3UTR CAA 90 bp | TGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAGAAAGGTCAACTGAAAACTaGGAGGATAGAACTTCTGTA | + |
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Preference number: 5 (lower is better) Translates to: CTALKFWDSNTYAEVQQERSTEN*EDRTSV Trigger: TACAGAAGTTCTATCCTCCAAGTTTTCAGTTGACCT...TTCTTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR CAA 90 bp | ATATGCACAGCTTTAAAGTTCTGGGATAGCAATACATATGCAGAGGTACAACAAATTAACAGCAGTATTTaGGATCCAAGGAGCACAGCT | + |
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Preference number: 5 (lower is better) Translates to: ICTALKFWDSNTYAEVQQINSSI*DPRSTA Trigger: AGCTGTGCTCCTTGGATCCAAAATACTGCTGTTAAT...TTGTTGTACCTCTGCATATGTATTGCTATCCCAGAACTTTAAAGCTGTGCATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS-3UTR CAA 90 bp | TTAGTAGTAGTCTTCAATAGCTGCTCATTAGCACTTATTTCCATTCGGAGCCTAATAGAACTTCTGTATTaGGCAGGTGACATTTATCAC | + |
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Preference number: 5 (lower is better) Translates to: LVVVFNSCSLALISIRSLIELLY*AGDIYH Trigger: GTGATAAATGTCACCTGCCAAATACAGAAGTTCTAT...TAGGCTCCGAATGGAAATAAGTGCTAATGAGCAGCTATTGAAGACTACTACTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS TCA 72 bp | AATCCATGGGATCTGCATGTAAAGGTCACTGTCTGCTaGGGGACAGCTCTGGCTGCAGGACCGGAGACCATA | + |
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Preference number: 6 (lower is better) Translates to: NPWDLHVKVTVC*GTALAAGPETI Trigger: TATGGTCTCCGGTCCTGCAGCCAGAGCTGTCCCTCAGCAGACAGTGACCTTTACATGCAGATCCCATGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 ENSMUST00000194144.3 |
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| CDS CCA 72 bp | AACCATTGTTGGCTGCTGGCGGATCTCCAGGGTGGGTaGAACTTGAATGAACTCAGAGATGTGAGCAATCCC | + |
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Preference number: 6 (lower is better) Translates to: NHCWLLADLQGG*NLNELRDVSNP Trigger: GGGATTGCTCACATCTCTGAGTTCATTCAAGTTCCACCCACCCTGGAGATCCGCCAGCAGCCAACAATGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS CAA 72 bp | ATGTTCTCCTGTGAACGGGTATATCAAGAGTCGACTTaGTCCTACACCCCTATACCACCTTATGGGCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: MFSCERVYQEST*SYTPIPPYGPH Trigger: GTGGGGCCCATAAGGTGGTATAGGGGTGTAGGACAAAGTCGACTCTTGATATACCCGTTCACAGGAGAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS GCA 72 bp | TTTAACAGGTTGGATCACTTTCAGCTCTCTCACAGCTaGTCCTTTAAATCCCAGAAGCAGGATCAACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: FNRLDHFQLSHS*SFKSQKQDQQQ Trigger: CTGCTGTTGATCCTGCTTCTGGGATTTAAAGGAGCAGCTGTGAGAGAGCTGAAAGTGATCCAACCTGTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS GCA 72 bp | TCCAAGGAGCACAGCTACAGGTATTTTAGCAATACCTaGCGTCTTCAGTTCAGACTTGGTAGCAGTACCTTT | + |
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Preference number: 6 (lower is better) Translates to: SKEHSYRYFSNT*RLQFRLGSSTF Trigger: AAAGGTACTGCTACCAAGTCTGAACTGAAGACGGCAGGTATTGCTAAAATACCTGTAGCTGTGCTCCTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099201.9 |
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| CDS CAA 90 bp | ACAGTATGGGTTTCAATGACTTCTGCTTGTTCATCATGCTCAACCTaGCATGTCACTACCATGTTCTCCTCAAGGGCAGATATGTTCACC | + |
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Preference number: 6 (lower is better) Translates to: TVWVSMTSACSSCST*HVTTMFSSRADMFT Trigger: GGTGAACATATCTGCCCTTGAGGAGAACATGGTAGTGACATGCAAGGTTGAGCATGATGAACAAGCAGAAGTCATTGAAACCCATACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS TCA 72 bp | ACACTTGTTTCTTCCGGTTCCACAGAAGTTTCCAAGTaGGAGATCTCATCTCCATTCTTGAACCACTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: TLVSSGSTEVSK*EISSPFLNHFS Trigger: GCTGAAGTGGTTCAAGAATGGAGATGAGATCTCTCACTTGGAAACTTCTGTGGAACCGGAAGAAACAAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 ENSMUST00000194144.3 |
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| CDS TCA 72 bp | TTCAGTTCAGACTTGGTAGCAGTACCTTTCACTCTCTaGTGTTCAGTGACCAGCACAGTATGGGTTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: FSSDLVAVPFTL*CSVTSTVWVSM Trigger: CATTGAAACCCATACTGTGCTGGTCACTGAACATCAGAGAGTGAAAGGTACTGCTACCAAGTCTGAACTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099201.9 |
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| CDS TCA 72 bp | TTAGCAATACCTGCCGTCTTCAGTTCTTTCACTCTCTaGTGTTCAGTGACCAGCACAGTATGGGTTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: LAIPAVFSSFTL*CSVTSTVWVSM Trigger: CATTGAAACCCATACTGTGCTGGTCACTGAACATCAGAGAGTGAAAGAACTGAAGACGGCAGGTATTGCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192700.3 |
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| CDS GCA 72 bp | TTCAGTGACCAGCACAGTATGGGTTTCAATGACTTCTaGTTGTTCATCATGCTCAACCTTGCATGTCACTAC | + |
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Preference number: 6 (lower is better) Translates to: FSDQHSMGFNDF*LFIMLNLACHY Trigger: GTAGTGACATGCAAGGTTGAGCATGATGAACAAGCAGAAGTCATTGAAACCCATACTGTGCTGGTCACTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS GCA 72 bp | TCCAAGGAGCACAGCTACAGGTATTTTAGCAATACCTaGCGTCTTCAGTTCTTTCACTCTCTGATGTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SKEHSYRYFSNT*RLQFFHSLMFS Trigger: ACTGAACATCAGAGAGTGAAAGAACTGAAGACGGCAGGTATTGCTAAAATACCTGTAGCTGTGCTCCTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192700.3 |
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| CDS CAA 72 bp | GTTTCAATGACTTCTGCTTGTTCATCATGCTCAACCTaGCATGTCACTACCATGTTCTCCTCAAGGGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: VSMTSACSSCST*HVTTMFSSRAD Trigger: ATCTGCCCTTGAGGAGAACATGGTAGTGACATGCAAGGTTGAGCATGATGAACAAGCAGAAGTCATTGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS CAA 72 bp | AGTGACCAGCACAGTATGGGTTTCAATGACTTCTGCTaGTTCATCATGCTCAACCTTGCATGTCACTACCAT | + |
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Preference number: 6 (lower is better) Translates to: SDQHSMGFNDFC*FIMLNLACHYH Trigger: ATGGTAGTGACATGCAAGGTTGAGCATGATGAACAAGCAGAAGTCATTGAAACCCATACTGTGCTGGTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS GCA 72 bp | ACAGTATGGGTTTCAATGACTTCTGCTTGTTCATCATaGTCAACCTTGCATGTCACTACCATGTTCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: TVWVSMTSACSS*STLHVTTMFSS Trigger: TGAGGAGAACATGGTAGTGACATGCAAGGTTGAGCATGATGAACAAGCAGAAGTCATTGAAACCCATACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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| CDS TCA 72 bp | GAAAACTTGGAGGATAGAACTTCTGTATTTGGCAGGTaGCATTTATCACATTCCAAACCATTGTTGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: ENLEDRTSVFGR*HLSHSKPLLAA Trigger: AGCAGCCAACAATGGTTTGGAATGTGATAAATGTCACCTGCCAAATACAGAAGTTCTATCCTCCAAGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099201.9 ENSMUST00000192700.3 |
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