RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIN3A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042557

Ensembl transcript IDs: ENSMUST00000049169.6, ENSMUST00000163400.8, ENSMUST00000167715.8, ENSMUST00000168177.8, ENSMUST00000168502.8, ENSMUST00000168678.8, ENSMUST00000169879.8

Found 692 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTAGTTGAGCTCTGCTGGTGTGTGCAAGCAAGCTGCCTGTCTCTGTaGTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGT +
Preference number: 1 (lower is better)
Translates to: VVELCWCVQASCLSL*LHGLHSLLGLGSTR
Trigger: ACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACAGGCAGCTTGCTTGCACACACCAGCAGAGCTCAACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR CCA 90 bp AAGCAAGCTGCCTGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTaGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCC +
Preference number: 1 (lower is better)
Translates to: KQAACLCACMDFIPC*VWVVPVGKVPVPAS
Trigger: GGAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACAGGCAGCTTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR TCA 90 bp CCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTaGTTCTTCAGTGTACATGAGTACACATGCCCCCACACACACACA +
Preference number: 1 (lower is better)
Translates to: PAGAWLHWWLERHLP*FFSVHEYTCPHTHT
Trigger: TGTGTGTGTGTGGGGGCATGTGTACTCATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR TCA 90 bp AAATGGGGACAGCATCTGGTTGCTCAGGTCATAGGAAGTTGTAGTTaGGCTCTGCTGGTGTGTGCAAGCAAGCTGCCTGTCTCTGTGCTT +
Preference number: 1 (lower is better)
Translates to: KWGQHLVAQVIGSCS*ALLVCASKLPVSVL
Trigger: AAGCACAGAGACAGGCAGCTTGCTTGCACACACCAGCAGAGCTCAACTACAACTTCCTATGACCTGAGCAACCAGATGCTGTCCCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR GCA 90 bp ATCCATCCATTCGCATTCCTTTCGTGTATCCTGCTGGTGCCTGGTTaGACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTAC +
Preference number: 1 (lower is better)
Translates to: IHPFAFLSCILLVPG*TGGLKGIFLDSSVY
Trigger: GTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACACGAAAGGAATGCGAATGGATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR CCA 90 bp AGCAGGTACAAAACAGTCCCATGGGAGCTAAAAAGGAGGACTGACTaGAATTTGTTGAGGCCGAGAACCAGAAGAGGGAAGAAGGTGAAC +
Preference number: 1 (lower is better)
Translates to: SRYKTVPWELKRRTD*NLLRPRTRRGKKVN
Trigger: GTTCACCTTCTTCCCTCTTCTGGTTCTCGGCCTCAACAAATTCCAGTCAGTCCTCCTTTTTAGCTCCCATGGGACTGTTTTGTACCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR CCA 90 bp AAATGTCTTGTACATCTGTTTATAGGTACTAAATCTGAAGCCACATaGTACTATGGTACACAAGAAGCTAGAGCAGTTATGCTAGCACAT +
Preference number: 1 (lower is better)
Translates to: KCLVHLFIGTKSEAT*YYGTQEARAVMLAH
Trigger: ATGTGCTAGCATAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAACAGATGTACAAGACATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR GCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCCGTGTATCCTGCTGGTaGCTGGTTGCACTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVRVSCW*LVALVA
Trigger: AGCCACCAGTGCAACCAGGCACCAGCAGGATACACG...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR GCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCGTGTATCCTGCTGGTaGCTGGTTGCACTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVRVSCW*LVALVA
Trigger: AGCCACCAGTGCAACCAGGCACCAGCAGGATACACG...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR GCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCAGCTCTGCTGGTGTGTaGAAGCAAGCTGCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVSSAGV*KQAACL
Trigger: GAGACAGGCAGCTTGCTTGCACACACCAGCAGAGCT...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR GCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAACGTGTATCCTGCTGGTaGCTGGTTGCACTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQRVSCW*LVALVA
Trigger: AGCCACCAGTGCAACCAGGCACCAGCAGGATACACG...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGCCTGGTTGCACTGGTaGCTTGAAAGGCATCTTCCT +
Preference number: 2 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVAWLHW*LERHLP
Trigger: AGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGACTTCATTCCCTGTTaGGTCTGGGTAGTACCCGTG +
Preference number: 2 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVDFIPC*VWVVPV
Trigger: CACGGGTACTACCCAGACCCAACAGGGAATGAAGTC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGTAGTTGAGCTCTGCTaGTGTGTGCAAGCAAGCTGC +
Preference number: 2 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVVVELC*CVQASC
Trigger: GCAGCTTGCTTGCACACACCAGCAGAGCTCAACTAC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR GCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGTTGTAGTTGAGCTCTaGTGGTGTGTGCAAGCAAGC +
Preference number: 2 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVVVVEL*WCVQAS
Trigger: GCTTGCTTGCACACACCAGCAGAGCTCAACTACAAC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGTCTCTGTGCTTGCATaGACTTCATTCCCTGTTGGG +
Preference number: 2 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVVSVLA*TSFPVG
Trigger: CCCAACAGGGAATGAAGTCCATGCAAGCACAGAGAC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR GCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGTACATGAGTACACATaGCCCCACACACACACATAC +
Preference number: 2 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVVHEYT*PHTHTY
Trigger: GTATGTGTGTGTGTGGGGGCATGTGTACTCATGTAC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR GCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCGTACATGAGTACACATaGCCCCACACACACACATAC +
Preference number: 2 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFVHEYT*PHTHTY
Trigger: GTATGTGTGTGTGTGGGGGCATGTGTACTCATGTAC...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAGCCTGGTTGCACTGGTaGCTTGAAAGGCATCTTCCT +
Preference number: 2 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQAWLHW*LERHLP
Trigger: AGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGC...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAGACTTCATTCCCTGTTaGGTCTGGGTAGTACCCGTG +
Preference number: 2 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQDFIPC*VWVVPV
Trigger: CACGGGTACTACCCAGACCCAACAGGGAATGAAGTC...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAGTAGTTGAGCTCTGCTaGTGTGTGCAAGCAAGCTGC +
Preference number: 2 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQVVELC*CVQASC
Trigger: GCAGCTTGCTTGCACACACCAGCAGAGCTCAACTAC...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATGTAGTTGAGCTCTGCTaGTGTGTGCAAGCAAGCTGC +
Preference number: 2 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHVVELC*CVQASC
Trigger: GCAGCTTGCTTGCACACACCAGCAGAGCTCAACTAC...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR GCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATGTACATGAGTACACATaGCCCCACACACACACATAC +
Preference number: 2 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDVHEYT*PHTHTY
Trigger: GTATGTGTGTGTGTGGGGGCATGTGTACTCATGTAC...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR GCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAGTACATGAGTACACATaGCCCCACACACACACATAC +
Preference number: 2 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQVHEYT*PHTHTY
Trigger: GTATGTGTGTGTGTGGGGGCATGTGTACTCATGTAC...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR GCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTCTGCTGGTGCCTGGTTaGACTGGTGGCTTGAAAGGC +
Preference number: 2 (lower is better)
Translates to: GTKSEATWYYGTQEARAVLLVPG*TGGLKG
Trigger: GCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAG...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR TCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTGTGCATGTGTGCGTGTaGGAGAGAAGCTGGTGGATG +
Preference number: 2 (lower is better)
Translates to: GTKSEATWYYGTQEARAVVHVCV*ERSWWM
Trigger: CATCCACCAGCTTCTCTCTCACACGCACACATGCAC...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR GCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGCTCTGCTGGTGTGTaGAAGCAAGCTGCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: GTKSEATWYYGTQEARAVSSAGV*KQAACL
Trigger: GAGACAGGCAGCTTGCTTGCACACACCAGCAGAGCT...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTGCCTGGTTGCACTGGTaGCTTGAAAGGCATCTTCCT +
Preference number: 2 (lower is better)
Translates to: GTKSEATWYYGTQEARAVAWLHW*LERHLP
Trigger: AGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGC...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR GCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGCTGCCTGTCTCTGTaGTTGCATGGACTTCATTCC +
Preference number: 2 (lower is better)
Translates to: GTKSEATWYYGTQEARAVSCLSL*LHGLHS
Trigger: GGAATGAAGTCCATGCAAGCACAGAGACAGGCAGCT...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR GCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTGGGACAGCATCTGGTTaGTCAGGTCATAGGAAGTTG +
Preference number: 2 (lower is better)
Translates to: GTKSEATWYYGTQEARAVGTASG*SGHRKL
Trigger: CAACTTCCTATGACCTGAGCAACCAGATGCTGTCCC...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR GCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGGAGCAGTGACAAGATaGACCTCCATCCATCCATCC +
Preference number: 2 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLGAVTR*TSIHPS
Trigger: GGATGGATGGATGGAGGTGCATCTTGTCACTGCTCC...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTGTCTCTGTGCTTGCATaGACTTCATTCCCTGTTGGG +
Preference number: 2 (lower is better)
Translates to: GTKSEATWYYGTQEARAVVSVLA*TSFPVG
Trigger: CCCAACAGGGAATGAAGTCCATGCAAGCACAGAGAC...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTGGTATCATCAAATCCTaGCTCCCCTCCCCTCTCTTT +
Preference number: 2 (lower is better)
Translates to: GTKSEATWYYGTQEARAVGIIKS*LPSPLF
Trigger: AAAGAGAGGGGAGGGGAGCCAGGATTTGATGATACC...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR GCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGTTGTAGTTGAGCTCTaGTGGTGTGTGCAAGCAAGC +
Preference number: 2 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLVVVEL*WCVQAS
Trigger: GCTTGCTTGCACACACCAGCAGAGCTCAACTACAAC...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGGTATCATCAAATCCTaGCTCCCCTCCCCTCTCTTT +
Preference number: 2 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLGIIKS*LPSPLF
Trigger: AAAGAGAGGGGAGGGGAGCCAGGATTTGATGATACC...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR TCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTGAAGAGGGAAGAAGGTaGACTTCAAGGACTCAGAAA +
Preference number: 2 (lower is better)
Translates to: GTKSEATWYYGTQEARAVEEGRR*TSRTQK
Trigger: TTTCTGAGTCCTTGAAGTTCACCTTCTTCCCTCTTC...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAATCCATCCATCCAAATaGGGACAGCATCTGGTTGCT +
Preference number: 2 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLIHPSK*GQHLVA
Trigger: AGCAACCAGATGCTGTCCCCATTTGGATGGATGGAT...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAATCCATCCATCCAAATaGGGACAGCATCTGGTTGCT +
Preference number: 2 (lower is better)
Translates to: FIGTKSEATWYYGTQEARIHPSK*GQHLVA
Trigger: AGCAACCAGATGCTGTCCCCATTTGGATGGATGGAT...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CAA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCCCTGCTGGTGCCTGGTaGCACTGGTGGCTTGAAAGG +
Preference number: 3 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVPAGAW*HWWLER
Trigger: CCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGG...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR GCA 72 bp CTCTGCTGGTGTGTGCAAGCAAGCTGCCTGTCTCTGTaGTTGCATGGACTTCATTCCCTGTTGGGTCTGGGT +
Preference number: 3 (lower is better)
Translates to: LCWCVQASCLSL*LHGLHSLLGLG
Trigger: ACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACAGGCAGCTTGCTTGCACACACCAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CAA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCTGCCTGTCTCTGTGCTaGCATGGACTTCATTCCCTG +
Preference number: 3 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVCLSLC*HGLHSL
Trigger: CAGGGAATGAAGTCCATGCAAGCACAGAGACAGGCA...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR CCA 72 bp GCCTGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTaGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTT +
Preference number: 3 (lower is better)
Translates to: ACLCACMDFIPC*VWVVPVGKVPV
Trigger: AACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR TCA 72 bp CAGCATCTGGTTGCTCAGGTCATAGGAAGTTGTAGTTaGGCTCTGCTGGTGTGTGCAAGCAAGCTGCCTGTC +
Preference number: 3 (lower is better)
Translates to: QHLVAQVIGSCS*ALLVCASKLPV
Trigger: GACAGGCAGCTTGCTTGCACACACCAGCAGAGCTCAACTACAACTTCCTATGACCTGAGCAACCAGATGCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR GCA 72 bp GTTGTAGTTGAGCTCTGCTGGTGTGTGCAAGCAAGCTaGCTGTCTCTGTGCTTGCATGGACTTCATTCCCTG +
Preference number: 3 (lower is better)
Translates to: VVVELCWCVQAS*LSLCLHGLHSL
Trigger: CAGGGAATGAAGTCCATGCAAGCACAGAGACAGGCAGCTTGCTTGCACACACCAGCAGAGCTCAACTACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CAA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGGGTTGCACTGGTGGCTaGAAAGGCATCTTCCTTGAT +
Preference number: 3 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVGCTGG*KGIFLD
Trigger: ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACC...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CAA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAATGCCTGTCTCTGTGCTaGCATGGACTTCATTCCCTG +
Preference number: 3 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQCLSLC*HGLHSL
Trigger: CAGGGAATGAAGTCCATGCAAGCACAGAGACAGGCA...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CAA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAGGTTGCACTGGTGGCTaGAAAGGCATCTTCCTTGAT +
Preference number: 3 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQGCTGG*KGIFLD
Trigger: ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACC...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CAA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTGCCTGTCTCTGTGCTaGCATGGACTTCATTCCCTG +
Preference number: 3 (lower is better)
Translates to: GTKSEATWYYGTQEARAVCLSLC*HGLHSL
Trigger: CAGGGAATGAAGTCCATGCAAGCACAGAGACAGGCA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CAA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATGCCTGTCTCTGTGCTaGCATGGACTTCATTCCCTG +
Preference number: 3 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLCLSLC*HGLHSL
Trigger: CAGGGAATGAAGTCCATGCAAGCACAGAGACAGGCA...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CAA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGGTTGCACTGGTGGCTaGAAAGGCATCTTCCTTGAT +
Preference number: 3 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLGCTGG*KGIFLD
Trigger: ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACC...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CAA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAACTGACTGGAATTTGTaGAGGCCGAGAACCAGAAGA +
Preference number: 3 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLTDWNL*RPRTRR
Trigger: TCTTCTGGTTCTCGGCCTCAACAAATTCCAGTCAGT...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR-3UTR CAA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGGTTGCACTGGTGGCTaGAAAGGCATCTTCCTTGAT +
Preference number: 3 (lower is better)
Translates to: FIGTKSEATWYYGTQEARGCTGG*KGIFLD
Trigger: ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACC...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR CCA 72 bp GTACATCTGTTTATAGGTACTAAATCTGAAGCCACATaGTACTATGGTACACAAGAAGCTAGAGCAGTTATG +
Preference number: 3 (lower is better)
Translates to: VHLFIGTKSEAT*YYGTQEARAVM
Trigger: CATAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAACAGATGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGTGCTGGGTGGGCATaGCTCTGGACCACCTGGCCT +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVGAGWA*LWTTWP
Trigger: AGGCCAGGTGGTCCAGAGCCATGCCCACCCAGCACC...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGGGTGCTGGGTGGGCATaGCTCTGGACCACCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVGAGWA*LWTTWP
Trigger: AGGCCAGGTGGTCCAGAGCCATGCCCACCCAGCACC...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCTGGTGCAACTGGTGGTaGTGGGTGGGCATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVWCNWW*WVGMAL
Trigger: CAGAGCCATGCCCACCCAGCACCACCAGTTGCACCA...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCGCTCCTGTTCCAGAGTaGCTGCGGATCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFAPVPE*LRIWQP
Trigger: TGGCTGCCAGATCCGCAGGCACTCTGGAACAGGAGC...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGCTCCTGTTCCAGAGTaGCTGCGGATCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVAPVPE*LRIWQP
Trigger: TGGCTGCCAGATCCGCAGGCACTCTGGAACAGGAGC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGAGGAGTCCGTCCCGTaGACTTGGGCTGCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVEESVP*TWAAGN
Trigger: GTTACCAGCAGCCCAAGTGCACGGGACGGACTCCTC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATGGTGCTGGGTGGGCATaGCTCTGGACCACCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHGAGWA*LWTTWP
Trigger: AGGCCAGGTGGTCCAGAGCCATGCCCACCCAGCACC...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCGTTGGGAAGGCTTGCTaGCTTTGGCAGCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFVGKAC*LWQLWA
Trigger: AGCCCACAGCTGCCAAAGTCAGCAAGCCTTCCCAAC...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCAGTGGGGGAGTCTGCTaGCTGGCTGGAGTATGTGCT +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVSGGVC*LAGVCA
Trigger: AGCACATACTCCAGCCAGTCAGCAGACTCCCCCACT...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCAGTGGGGGAGTCTGCTaGCTGGCTGGAGTATGTGCT +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFSGGVC*LAGVCA
Trigger: AGCACATACTCCAGCCAGTCAGCAGACTCCCCCACT...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTGGTGCAACTGGTGGTaGTGGGTGGGCATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVWCNWW*WVGMAL
Trigger: CAGAGCCATGCCCACCCAGCACCACCAGTTGCACCA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGGCTCCTGTTCCAGAGTaGCTGCGGATCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVAPVPE*LRIWQP
Trigger: TGGCTGCCAGATCCGCAGGCACTCTGGAACAGGAGC...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGGAGGAGTCCGTCCCGTaGACTTGGGCTGCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVEESVP*TWAAGN
Trigger: GTTACCAGCAGCCCAAGTGCACGGGACGGACTCCTC...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCTGTACTGGTGCAACTaGTGGTGCTGGGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFLYWCN*WCWVGM
Trigger: CATGCCCACCCAGCACCACCAGTTGCACCAGTACAG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCTGCTGTCCCTGTACTaGTGCAACTGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFLLSLY*CNWWCW
Trigger: CCAGCACCACCAGTTGCACCAGTACAGGGACAGCAG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCCTGGCTGAGCAGGAGTaGGAGCTGACTGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVLAEQE*ELTGMK
Trigger: CTTCATCCCAGTCAGCTCCCACTCCTGCTCAGCCAG...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCTGCATATGGTGGGAGTaGGGGAGTCTGCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFCIWWE*GSLLTG
Trigger: GCCAGTCAGCAGACTCCCCCACTCCCACCATATGCA...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCTGGGGATGCATATGGTaGGAGTGGGGGAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFWGCIW*EWGSLL
Trigger: CAGCAGACTCCCCCACTCCCACCATATGCATCCCCA...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCTGGGGATGCATATGGTaGGAGTGGGGGAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVWGCIW*EWGSLL
Trigger: CAGCAGACTCCCCCACTCCCACCATATGCATCCCCA...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCACGTGGGGATGCATATaGTGGGAGTGGGGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFTWGCI*WEWGSL
Trigger: CAGACTCCCCCACTCCCACCATATGCATCCCCACGT...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCTGTATCACAGGTGGTaGTGCAGGGTACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFLYHRW*CRVPGP
Trigger: AGGGCCTGGTACCCTGCACCACCACCTGTGATACAG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCTCCACCTTGAGCCTCTaGAACTGCTGCTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFSTLSL*NCCCPC
Trigger: ACAGGGACAGCAGCAGTTTCAGAGGCTCAAGGTGGA...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGAGTGGGGGAGTCTGCTaGCTGGCTGGAGTATGTGCT +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVSGGVC*LAGVCA
Trigger: AGCACATACTCCAGCCAGTCAGCAGACTCCCCCACT...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCCTCGCCAGACCTTGTTaGAGCCTCTCTGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVLARPC*SLSELL
Trigger: GAGAAGCTCAGAGAGGCTTCAACAAGGTCTGGCGAG...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTGCTCTCGACCACGTTaGCACTTCCGGATACGCCGC +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHCSRPR*HFRIRR
Trigger: GCGGCGTATCCGGAAGTGTCAACGTGGTCGAGAGCA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAATGCTCTCGACCACGTTaGCACTTCCGGATACGCCGC +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQCSRPR*HFRIRR
Trigger: GCGGCGTATCCGGAAGTGTCAACGTGGTCGAGAGCA...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTGCTCTCGACCACGTTaGCACTTCCGGATACGCCGC +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDCSRPR*HFRIRR
Trigger: GCGGCGTATCCGGAAGTGTCAACGTGGTCGAGAGCA...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGGGACTGATGAGCTCTaGGTAGAGCAGTTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVGTDEL*VEQFSG
Trigger: ACCGGAGAACTGCTCTACTCAGAGCTCATCAGTCCC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGCAGGCCTGGAACCGCTaGTGCAGACGCTTGCTTACA +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVQAWNR*CRRLLT
Trigger: TGTAAGCAAGCGTCTGCATCAGCGGTTCCAGGCCTG...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCCAGGAATCCTTCGCTaGTGGGCTGCATACACTGGT +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFPGILR*WAAYTG
Trigger: ACCAGTGTATGCAGCCCAGCAGCGAAGGATTCCTGG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCCCAGGAATCCTTCGCTaGTGGGCTGCATACACTGGT +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVPGILR*WAAYTG
Trigger: ACCAGTGTATGCAGCCCAGCAGCGAAGGATTCCTGG...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATGGCTGCTATGAACTaGTGCTATGGCGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVMAAMN*CYGGPM
Trigger: CATGGGCCCGCCATAGCAGCAGTTCATAGCAGCCAT...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTGGTGCAACTGGTGGTaGTGGGTGGGCATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDWCNWW*WVGMAL
Trigger: CAGAGCCATGCCCACCCAGCACCACCAGTTGCACCA...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGCTGTCCCTGTACTGGTaGAACTGGTGGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVLSLYW*NWWCWV
Trigger: CACCCAGCACCACCAGTTGCACCAGTACAGGGACAG...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATGAGGAGTCCGTCCCGTaGACTTGGGCTGCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHEESVP*TWAAGN
Trigger: GTTACCAGCAGCCCAAGTGCACGGGACGGACTCCTC...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGTACTGGTGCAACTGGTaGTGCTGGGTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVYWCNW*CWVGMA
Trigger: AGCCATGCCCACCCAGCACCACCAGTTGCACCAGTA...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCTGCTGTCCCTGTACTaGTGCAACTGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVLLSLY*CNWWCW
Trigger: CCAGCACCACCAGTTGCACCAGTACAGGGACAGCAG...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGGGAGTGGGAGCTGACTaGGATGAAGGCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVGVGAD*DEGWEG
Trigger: TCCTTCCCAGCCTTCATCCCAGTCAGCTCCCACTCC...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAGTGGGAGCTGACTaGGATGAAGGCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVGVGAD*DEGWEG
Trigger: TCCTTCCCAGCCTTCATCCCAGTCAGCTCCCACTCC...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTGGGGATGCATATGGTaGGAGTGGGGGAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVWGCIW*EWGSLL
Trigger: CAGCAGACTCCCCCACTCCCACCATATGCATCCCCA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGACGTGGGGATGCATATaGTGGGAGTGGGGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVTWGCI*WEWGSL
Trigger: CAGACTCCCCCACTCCCACCATATGCATCCCCACGT...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTGTGTGAGGCTGGACTaGTGGAGAACGTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVCVRLD*WRTWGC
Trigger: GCATCCCCACGTTCTCCACCAGTCCAGCCTCACACA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCTGTATCACAGGTGGTaGTGCAGGGTACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVLYHRW*CRVPGP
Trigger: AGGGCCTGGTACCCTGCACCACCACCTGTGATACAG...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATAGGACCCGGTGCTGGTaGGAAAAAGCCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDRTRCW*EKASVL
Trigger: GAGCACAGAGGCTTTTTCTCACCAGCACCGGGTCCT...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAAGGACCCGGTGCTGGTaGGAAAAAGCCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQRTRCW*EKASVL
Trigger: GAGCACAGAGGCTTTTTCTCACCAGCACCGGGTCCT...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCACTTTGTGGCACAGCTaGAACCTGGTAGTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFTLWHS*NLVVGC
Trigger: GCACCCAACTACCAGGTTTCAGCTGTGCCACAAAGT...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTCCACCTTGAGCCTCTaGAACTGCTGCTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVSTLSL*NCCCPC
Trigger: ACAGGGACAGCAGCAGTTTCAGAGGCTCAAGGTGGA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATGTTGGGAAGGCTTGCTaGCTTTGGCAGCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHVGKAC*LWQLWA
Trigger: AGCCCACAGCTGCCAAAGTCAGCAAGCCTTCCCAAC...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGCTCGCCAGACCTTGTTaGAGCCTCTCTGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVLARPC*SLSELL
Trigger: GAGAAGCTCAGAGAGGCTTCAACAAGGTCTGGCGAG...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCCTCTTCTTCCACATCTaGGAGATCGCCTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVLFFHI*EIASLS
Trigger: GCTCAGAGAGGCGATCTCTCAGATGTGGAAGAAGAG...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCTCCAGAAGGCTCCTTaGAGTCTGACTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFLQKAP*SLTVEL
Trigger: CAGCTCAACAGTCAGACTTCAAGGAGCCTTCTGGAG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCCTCCAGAAGGCTCCTTaGAGTCTGACTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVLQKAP*SLTVEL
Trigger: CAGCTCAACAGTCAGACTTCAAGGAGCCTTCTGGAG...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCATGGTCTCAGACACTaGTTCATACACAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFHGLRH*FIHRRG
Trigger: GCCCCTCCTGTGTATGAAGCAGTGTCTGAGACCATG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCCATGGTCTCAGACACTaGTTCATACACAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVHGLRH*FIHRRG
Trigger: GCCCCTCCTGTGTATGAAGCAGTGTCTGAGACCATG...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGGCTGCTATGAACTGCTaGTATGGCGGGCCCATGACT +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVAAMNC*YGGPMT
Trigger: AGTCATGGGCCCGCCATAGCAGCAGTTCATAGCAGC...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTGGAGAACGTGGGGATaGATATGGTGGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDWRTWG*IWWEWG
Trigger: CCCCCACTCCCACCATATGCATCCCCACGTTCTCCA...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTGGAGAACGTGGGGATaGATATGGTGGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHWRTWG*IWWEWG
Trigger: CCCCCACTCCCACCATATGCATCCCCACGTTCTCCA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCGCTGATGCAGACGCTTaGTTACACGCTCATGGGACT +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFADADA*LHAHGT
Trigger: AGTCCCATGAGCGTGTAAGCAAGCGTCTGCATCAGC...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGCCATTTGCTGGTCTCTaGTGCCATTTCCCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVPFAGL*CHFPRH
Trigger: GTGCCTCGGGAAATGGCAGCAGAGACCAGCAAATGG...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTATCACAGGTGGTGGTaGAGGGTACCAGGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHYHRWW*RVPGPR
Trigger: TCGAGGGCCTGGTACCCTGCACCACCACCTGTGATA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCGGAATCCTTCGCTGCTaGGCTGCATACACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFGILRC*AAYTGD
Trigger: ATCACCAGTGTATGCAGCCCAGCAGCGAAGGATTCC...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGTATGAACTGCTGCTATaGCGGGCCCATGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVYELLL*RAHDCQ
Trigger: CTGGCAGTCATGGGCCCGCCATAGCAGCAGTTCATA...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTACTGGTGCAACTGGTaGTGCTGGGTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHYWCNW*CWVGMA
Trigger: AGCCATGCCCACCCAGCACCACCAGTTGCACCAGTA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTACTGGTGCAACTGGTaGTGCTGGGTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDYWCNW*CWVGMA
Trigger: AGCCATGCCCACCCAGCACCACCAGTTGCACCAGTA...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATCTGTACTGGTGCAACTaGTGGTGCTGGGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHLYWCN*WCWVGM
Trigger: CATGCCCACCCAGCACCACCAGTTGCACCAGTACAG...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATGGAGTGGGAGCTGACTaGGATGAAGGCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDGVGAD*DEGWEG
Trigger: TCCTTCCCAGCCTTCATCCCAGTCAGCTCCCACTCC...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATCTGGCTGAGCAGGAGTaGGAGCTGACTGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHLAEQE*ELTGMK
Trigger: CTTCATCCCAGTCAGCTCCCACTCCTGCTCAGCCAG...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGGGGAGTCTGCTGACTaGCTGGAGTATGTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVGESAD*LEYVLV
Trigger: TACAAGCACATACTCCAGCCAGTCAGCAGACTCCCC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCGGGGAGTCTGCTGACTaGCTGGAGTATGTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFGESAD*LEYVLV
Trigger: TACAAGCACATACTCCAGCCAGTCAGCAGACTCCCC...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATACGTGGGGATGCATATaGTGGGAGTGGGGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDTWGCI*WEWGSL
Trigger: CAGACTCCCCCACTCCCACCATATGCATCCCCACGT...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATACGTGGGGATGCATATaGTGGGAGTGGGGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHTWGCI*WEWGSL
Trigger: CAGACTCCCCCACTCCCACCATATGCATCCCCACGT...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTGTGTGAGGCTGGACTaGTGGAGAACGTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDCVRLD*WRTWGC
Trigger: GCATCCCCACGTTCTCCACCAGTCCAGCCTCACACA...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAATGTGTGAGGCTGGACTaGTGGAGAACGTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQCVRLD*WRTWGC
Trigger: GCATCCCCACGTTCTCCACCAGTCCAGCCTCACACA...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCAAGAGTCGAGCCACCTaGGCATACACCTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVKSRAT*AYTSCS
Trigger: TGAGCAAGAGGTGTATGCCCAGGTGGCTCGACTCTT...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCCTGACTGGGCCTCTGTaGCTTGTTATTCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVLTGPL*LVIQLG
Trigger: CCCCAACTGAATAACAAGCCACAGAGGCCCAGTCAG...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGTCCGTCCCGTGCACTTaGGCTGCTGGTAACTTTTCG +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVSVPCT*AAGNFS
Trigger: CGAAAAGTTACCAGCAGCCCAAGTGCACGGGACGGA...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCCAATCGGAACAGCAATaGAGGGGTTCTTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVQSEQQ*RGSSSG
Trigger: GCCTGAGGAAGAACCCCTCCATTGCTGTTCCGATTG...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGAGGCACATGCTCCTTaGTCCATTTATCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVEAHAP*SIYPPR
Trigger: CCTGGGTGGATAAATGGACCAAGGAGCATGTGCCTC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATCTGTATCACAGGTGGTaGTGCAGGGTACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHLYHRW*CRVPGP
Trigger: AGGGCCTGGTACCCTGCACCACCACCTGTGATACAG...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR CAA 72 bp TGCTGGTGTGTGCAAGCAAGCTGCCTGTCTCTGTGCTaGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: CWCVQASCLSLC*HGLHSLLGLGS
Trigger: ACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACAGGCAGCTTGCTTGCACACACCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGTAGTTGGGTGCCACTaGGTACTGAATGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVVVGCH*VLNACS
Trigger: GCTACAGGCATTCAGTACTCAGTGGCACCCAACTAC...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCCACCTTGAGCCTCTaGAACTGCTGCTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDSTLSL*NCCCPC
Trigger: ACAGGGACAGCAGCAGTTTCAGAGGCTCAAGGTGGA...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCTCCTCAGGCCATCGATaGTATCAGCTGCTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVSSGHR*YQLLCQ
Trigger: CTGACAAAGCAGCTGATATCATCGATGGCCTGAGGA...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCTTGTTGAAGCCTCTCTaGGCTTCTCGCCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFLLKPL*ASRHSS
Trigger: AGAAGAGTGGCGAGAAGCTCAGAGAGGCTTCAACAA...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATCTCGCCAGACCTTGTTaGAGCCTCTCTGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDLARPC*SLSELL
Trigger: GAGAAGCTCAGAGAGGCTTCAACAAGGTCTGGCGAG...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATCTCGCCAGACCTTGTTaGAGCCTCTCTGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHLARPC*SLSELL
Trigger: GAGAAGCTCAGAGAGGCTTCAACAAGGTCTGGCGAG...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCTCTTCTTCCACATCTaGGAGATCGCCTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVLFFHI*EIASLS
Trigger: GCTCAGAGAGGCGATCTCTCAGATGTGGAAGAAGAG...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCTCCAGAAGGCTCCTTaGAGTCTGACTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVLQKAP*SLTVEL
Trigger: CAGCTCAACAGTCAGACTTCAAGGAGCCTTCTGGAG...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGCTCCAGAAGGCTCCTTaGAGTCTGACTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVLQKAP*SLTVEL
Trigger: CAGCTCAACAGTCAGACTTCAAGGAGCCTTCTGGAG...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATGGGACTGATGAGCTCTaGGTAGAGCAGTTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHGTDEL*VEQFSG
Trigger: ACCGGAGAACTGCTCTACTCAGAGCTCATCAGTCCC...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATGGGACTGATGAGCTCTaGGTAGAGCAGTTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDGTDEL*VEQFSG
Trigger: ACCGGAGAACTGCTCTACTCAGAGCTCATCAGTCCC...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAGGGACTGATGAGCTCTaGGTAGAGCAGTTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQGTDEL*VEQFSG
Trigger: ACCGGAGAACTGCTCTACTCAGAGCTCATCAGTCCC...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAACCAGGAATCCTTCGCTaGTGGGCTGCATACACTGGT +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQPGILR*WAAYTG
Trigger: ACCAGTGTATGCAGCCCAGCAGCGAAGGATTCCTGG...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATCCAGGAATCCTTCGCTaGTGGGCTGCATACACTGGT +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDPGILR*WAAYTG
Trigger: ACCAGTGTATGCAGCCCAGCAGCGAAGGATTCCTGG...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCGAGAAAAAGCCTCTGTaGTCCCAGGAATCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFEKKPL*SQESFA
Trigger: AGCGAAGGATTCCTGGGAGCACAGAGGCTTTTTCTC...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGAGAAAAAGCCTCTGTaGTCCCAGGAATCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVEKKPL*SQESFA
Trigger: AGCGAAGGATTCCTGGGAGCACAGAGGCTTTTTCTC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCATGGTCTCAGACACTaGTTCATACACAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVHGLRH*FIHRRG
Trigger: GCCCCTCCTGTGTATGAAGCAGTGTCTGAGACCATG...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCATGCCTGTAGCTGACTaGATGGTCTCAGACACTGCT +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFMPVAD*MVSDTA
Trigger: AGCAGTGTCTGAGACCATGCAGTCAGCTACAGGCAT...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATGCTGCTATGAACTGCTaGTATGGCGGGCCCATGACT +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHAAMNC*YGGPMT
Trigger: AGTCATGGGCCCGCCATAGCAGCAGTTCATAGCAGC...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAGCTGCTATGAACTGCTaGTATGGCGGGCCCATGACT +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQAAMNC*YGGPMT
Trigger: AGTCATGGGCCCGCCATAGCAGCAGTTCATAGCAGC...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATATGGCTGCTATGAACTaGTGCTATGGCGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDMAAMN*CYGGPM
Trigger: CATGGGCCCGCCATAGCAGCAGTTCATAGCAGCCAT...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCTGGGCATACACCTCTTaGTCAGTCAAAGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVWAYTS*SVKAGV
Trigger: CACTCCAGCTTTGACTGAGCAAGAGGTGTATGCCCA...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCCCCCAACACCATTGTaGTTCTTAGGTGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFPPTPL*FLGAPV
Trigger: AACAGGAGCACCTAAGAAGCACAATGGTGTTGGGGG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTCTTGTCTCGCTTTATaGCTAGCACCTCCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVSCLAL*LAPPVP
Trigger: GGGAACGGGAGGTGCTAGGCATAAAGCGAGACAAGA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGTGATGAGTCTATGTTaGCATCAAGCAGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVVMSLC*HQAGSA
Trigger: TGCGGAGCCTGCTTGATGGCAACATAGACTCATCAC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATCCATTTGCTGGTCTCTaGTGCCATTTCCCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHPFAGL*CHFPRH
Trigger: GTGCCTCGGGAAATGGCAGCAGAGACCAGCAAATGG...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAACCATTTGCTGGTCTCTaGTGCCATTTCCCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQPFAGL*CHFPRH
Trigger: GTGCCTCGGGAAATGGCAGCAGAGACCAGCAAATGG...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAATATGAACTGCTGCTATaGCGGGCCCATGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQYELLL*RAHDCQ
Trigger: CTGGCAGTCATGGGCCCGCCATAGCAGCAGTTCATA...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTATGAACTGCTGCTATaGCGGGCCCATGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHYELLL*RAHDCQ
Trigger: CTGGCAGTCATGGGCCCGCCATAGCAGCAGTTCATA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGAGGCTGGACAGCTGTTaGGTGATGATGGCTGCTATG +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVRLDSC*VMMAAM
Trigger: CATAGCAGCCATCATCACCCAACAGCTGTCCAGCCT...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGGCTGGATGCCATGGGTaGGAATCTGATGAACTTGGC +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVAGCHG*ESDELG
Trigger: GCCAAGTTCATCAGATTCCCACCCATGGCATCCAGC...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGGGGGAGTCTGCTGACTaGCTGGAGTATGTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVGESAD*LEYVLV
Trigger: TACAAGCACATACTCCAGCCAGTCAGCAGACTCCCC...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAGACTGGTGGAGAACGTaGGGATGCATATGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQDWWRT*GCIWWE
Trigger: CTCCCACCATATGCATCCCCACGTTCTCCACCAGTC...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATGACTGGTGGAGAACGTaGGGATGCATATGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDDWWRT*GCIWWE
Trigger: CTCCCACCATATGCATCCCCACGTTCTCCACCAGTC...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCAAAGCACTGAGCTGTTaGCATCTGGCAGGAACTGTC +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVKALSC*HLAGTV
Trigger: GACAGTTCCTGCCAGATGCCAACAGCTCAGTGCTTT...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGCTGACTGGGCCTCTGTaGCTTGTTATTCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVLTGPL*LVIQLG
Trigger: CCCCAACTGAATAACAAGCCACAGAGGCCCAGTCAG...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCTGACTGGGCCTCTGTaGCTTGTTATTCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVLTGPL*LVIQLG
Trigger: CCCCAACTGAATAACAAGCCACAGAGGCCCAGTCAG...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGCAGCCATTCTGACTaGGCCTCTGTGGCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVGSHSD*ASVACY
Trigger: ATAACAAGCCACAGAGGCCCAGTCAGAATGGCTGCC...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTCCGTCCCGTGCACTTaGGCTGCTGGTAACTTTTCG +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHSVPCT*AAGNFS
Trigger: CGAAAAGTTACCAGCAGCCCAAGTGCACGGGACGGA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCCGTCCCGTGCACTTaGGCTGCTGGTAACTTTTCG +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDSVPCT*AAGNFS
Trigger: CGAAAAGTTACCAGCAGCCCAAGTGCACGGGACGGA...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAATCCGTCCCGTGCACTTaGGCTGCTGGTAACTTTTCG +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQSVPCT*AAGNFS
Trigger: CGAAAAGTTACCAGCAGCCCAAGTGCACGGGACGGA...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGGAGGCACATGCTCCTTaGTCCATTTATCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVEAHAP*SIYPPR
Trigger: CCTGGGTGGATAAATGGACCAAGGAGCATGTGCCTC...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGAGGACCCGGTGCTGGTaGGAAAAAGCCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMRTRCW*EKASVL
Trigger: GAGCACAGAGGCTTTTTCTCACCAGCACCGGGTCCT...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATCTGAATGCCTGTAGCTaGCTGCATGGTCTCAGACAC +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHLNACS*LHGLRH
Trigger: GTGTCTGAGACCATGCAGTCAGCTACAGGCATTCAG...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATGTAGTTGGGTGCCACTaGGTACTGAATGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHVVGCH*VLNACS
Trigger: GCTACAGGCATTCAGTACTCAGTGGCACCCAACTAC...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATACTTTGTGGCACAGCTaGAACCTGGTAGTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDTLWHS*NLVVGC
Trigger: GCACCCAACTACCAGGTTTCAGCTGTGCCACAAAGT...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGAGTGGGGGAGTCTGCTaGCTGGCTGGAGTATGTGCT +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMSGGVC*LAGVCA
Trigger: AGCACATACTCCAGCCAGTCAGCAGACTCCCCCACT...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTCCTCAGGCCATCGATaGTATCAGCTGCTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVSSGHR*YQLLCQ
Trigger: CTGACAAAGCAGCTGATATCATCGATGGCCTGAGGA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGTCCTCAGGCCATCGATaGTATCAGCTGCTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVSSGHR*YQLLCQ
Trigger: CTGACAAAGCAGCTGATATCATCGATGGCCTGAGGA...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTTGTTGAAGCCTCTCTaGGCTTCTCGCCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVLLKPL*ASRHSS
Trigger: AGAAGAGTGGCGAGAAGCTCAGAGAGGCTTCAACAA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATCTCTTCTTCCACATCTaGGAGATCGCCTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHLFFHI*EIASLS
Trigger: GCTCAGAGAGGCGATCTCTCAGATGTGGAAGAAGAG...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCGAAGCAGTTCTCATCTaGCATAAGCTGCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFEAVLI*HKLLCL
Trigger: AAGGCAGAGCAGCTTATGTCAGATGAGAACTGCTTC...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGGAGAAAAAGCCTCTGTaGTCCCAGGAATCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVEKKPL*SQESFA
Trigger: AGCGAAGGATTCCTGGGAGCACAGAGGCTTTTTCTC...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGCTGTCCCTGTACTGGTaGAACTGGTGGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMLSLYW*NWWCWV
Trigger: CACCCAGCACCACCAGTTGCACCAGTACAGGGACAG...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTGGAGAACGTGGGGATaGATATGGTGGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMWRTWG*IWWEWG
Trigger: CCCCCACTCCCACCATATGCATCCCCACGTTCTCCA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTGGGCATACACCTCTTaGTCAGTCAAAGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVWAYTS*SVKAGV
Trigger: CACTCCAGCTTTGACTGAGCAAGAGGTGTATGCCCA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCTTCCAACACCATGCTTaGTGGCATCTGCCATTGAAG +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFFQHHA*WHLPLK
Trigger: CTTCAATGGCAGATGCCAGCAAGCATGGTGTTGGAA...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGTTTTCATAGGCCTCTaGACTCCGAAGAGCCTTTCG +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVVFIGL*TPKSLS
Trigger: CGAAAGGCTCTTCGGAGTGCAGAGGCCTATGAAAAC...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGCCCCCAACACCATTGTaGTTCTTAGGTGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVPPTPL*FLGAPV
Trigger: AACAGGAGCACCTAAGAAGCACAATGGTGTTGGGGG...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTCTTGTCTCGCTTTATaGCTAGCACCTCCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHSCLAL*LAPPVP
Trigger: GGGAACGGGAGGTGCTAGGCATAAAGCGAGACAAGA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAGCTGATGCAGACGCTTaGTTACACGCTCATGGGACT +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQADADA*LHAHGT
Trigger: AGTCCCATGAGCGTGTAAGCAAGCGTCTGCATCAGC...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATGCTGATGCAGACGCTTaGTTACACGCTCATGGGACT +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDADADA*LHAHGT
Trigger: AGTCCCATGAGCGTGTAAGCAAGCGTCTGCATCAGC...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCATTTCCCGAGGCACATaGTCCTTGGTCCATTTATCC +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFISRGT*SLVHLS
Trigger: GGATAAATGGACCAAGGAGCATGTGCCTCGGGAAAT...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTATCACAGGTGGTGGTaGAGGGTACCAGGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMYHRWW*RVPGPR
Trigger: TCGAGGGCCTGGTACCCTGCACCACCACCTGTGATA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCTACACTGGTGATTCCTaGTCATCCAAACGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFYTGDS*SSKRRF
Trigger: GAAGCGACGTTTGGATGACCAGGAATCACCAGTGTA...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATGGAATCCTTCGCTGCTaGGCTGCATACACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDGILRC*AAYTGD
Trigger: ATCACCAGTGTATGCAGCCCAGCAGCGAAGGATTCC...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCTGAAACCTGGTAGTTaGGTGCCACTGAGTACTGAA +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFLKPGS*VPLSTE
Trigger: TTCAGTACTCAGTGGCACCCAACTACCAGGTTTCAG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATAGGCTGGACAGCTGTTaGGTGATGATGGCTGCTATG +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHRLDSC*VMMAAM
Trigger: CATAGCAGCCATCATCACCCAACAGCTGTCCAGCCT...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGCTGCTGTCCCTGTACTaGTGCAACTGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMLLSLY*CNWWCW
Trigger: CCAGCACCACCAGTTGCACCAGTACAGGGACAGCAG...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAGCTGGATGCCATGGGTaGGAATCTGATGAACTTGGC +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQAGCHG*ESDELG
Trigger: GCCAAGTTCATCAGATTCCCACCCATGGCATCCAGC...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATGCTGGATGCCATGGGTaGGAATCTGATGAACTTGGC +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDAGCHG*ESDELG
Trigger: GCCAAGTTCATCAGATTCCCACCCATGGCATCCAGC...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATGGGGAGTCTGCTGACTaGCTGGAGTATGTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDGESAD*LEYVLV
Trigger: TACAAGCACATACTCCAGCCAGTCAGCAGACTCCCC...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTGCATATGGTGGGAGTaGGGGAGTCTGCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMCIWWE*GSLLTG
Trigger: GCCAGTCAGCAGACTCCCCCACTCCCACCATATGCA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCTTGCTCAGTCAAAGCTaGAGTGTAGTTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFLLSQS*SVVSSS
Trigger: GCTGGAGGAAACTACACTCCAGCTTTGACTGAGCAA...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCTTGCTCAGTCAAAGCTaGAGTGTAGTTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVLLSQS*SVVSSS
Trigger: GCTGGAGGAAACTACACTCCAGCTTTGACTGAGCAA...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATAAGAGTCGAGCCACCTaGGCATACACCTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHKSRAT*AYTSCS
Trigger: TGAGCAAGAGGTGTATGCCCAGGTGGCTCGACTCTT...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGAAAGCACTGAGCTGTTaGCATCTGGCAGGAACTGTC +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVKALSC*HLAGTV
Trigger: GACAGTTCCTGCCAGATGCCAACAGCTCAGTGCTTT...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATCTGACTGGGCCTCTGTaGCTTGTTATTCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHLTGPL*LVIQLG
Trigger: CCCCAACTGAATAACAAGCCACAGAGGCCCAGTCAG...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATGGCAGCCATTCTGACTaGGCCTCTGTGGCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDGSHSD*ASVACY
Trigger: ATAACAAGCCACAGAGGCCCAGTCAGAATGGCTGCC...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAGGCAGCCATTCTGACTaGGCCTCTGTGGCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQGSHSD*ASVACY
Trigger: ATAACAAGCCACAGAGGCCCAGTCAGAATGGCTGCC...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCAACACCATGCTTGCTaGCATCTGCCATTGAAGACT +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFQHHAC*HLPLKT
Trigger: AGTCTTCAATGGCAGATGCCAGCAAGCATGGTGTTG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGTCTTCAGACCAAGATaGGAAGGAAACCCAGGTATC +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVVFRPR*EGNPGI
Trigger: GATACCTGGGTTTCCTTCCCATCTTGGTCTGAAGAC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTGGAGTGCTTTTCGATaGATGACTTCGGACGTGCCT +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVWSAFR*MTSDVP
Trigger: AGGCACGTCCGAAGTCATCCATCGAAAAGCACTCCA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCTGCCTCTTCACATGGTaGATAATCAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVCLFTW*IIRAAA
Trigger: TGCTGCTGCTCTGATTATCCACCATGTGAAGAGGCA...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTCCACCTTGAGCCTCTaGAACTGCTGCTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMSTLSL*NCCCPC
Trigger: ACAGGGACAGCAGCAGTTTCAGAGGCTCAAGGTGGA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATAATCTTCCTGGTTTTTaGAGAGTCGAGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDNLPGF*RVEPPG
Trigger: CCCAGGTGGCTCGACTCTTCAAAAACCAGGAAGATT...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAAATCTTCCTGGTTTTTaGAGAGTCGAGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQNLPGF*RVEPPG
Trigger: CCCAGGTGGCTCGACTCTTCAAAAACCAGGAAGATT...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATGAGAAAAAGCCTCTGTaGTCCCAGGAATCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDEKKPL*SQESFA
Trigger: AGCGAAGGATTCCTGGGAGCACAGAGGCTTTTTCTC...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATATGCCTGTAGCTGACTaGATGGTCTCAGACACTGCT +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHMPVAD*MVSDTA
Trigger: AGCAGTGTCTGAGACCATGCAGTCAGCTACAGGCAT...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGATGGCTGCTATGAACTaGTGCTATGGCGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMMAAMN*CYGGPM
Trigger: CATGGGCCCGCCATAGCAGCAGTTCATAGCAGCCAT...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTTCCAACACCATGCTTaGTGGCATCTGCCATTGAAG +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVFQHHA*WHLPLK
Trigger: CTTCAATGGCAGATGCCAGCAAGCATGGTGTTGGAA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAGTTTTCATAGGCCTCTaGACTCCGAAGAGCCTTTCG +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQVFIGL*TPKSLS
Trigger: CGAAAGGCTCTTCGGAGTGCAGAGGCCTATGAAAAC...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATGTTTTCATAGGCCTCTaGACTCCGAAGAGCCTTTCG +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDVFIGL*TPKSLS
Trigger: CGAAAGGCTCTTCGGAGTGCAGAGGCCTATGAAAAC...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTGTGCTTCTTAGGTaGTCCTGTTGCTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVIVLLR*SCCFIH
Trigger: GTGGATGAAGCAACAGGAGCACCTAAGAAGCACAAT...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATCCCCCAACACCATTGTaGTTCTTAGGTGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHPPTPL*FLGAPV
Trigger: AACAGGAGCACCTAAGAAGCACAATGGTGTTGGGGG...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAACCCCCAACACCATTGTaGTTCTTAGGTGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQPPTPL*FLGAPV
Trigger: AACAGGAGCACCTAAGAAGCACAATGGTGTTGGGGG...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTCATCTGACATAAGCTaGTCTGCCTTCCGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVSSDIS*SAFRWY
Trigger: ATACCAGCGGAAGGCAGAGCAGCTTATGTCAGATGA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGTCATCTGACATAAGCTaGTCTGCCTTCCGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVSSDIS*SAFRWY
Trigger: ATACCAGCGGAAGGCAGAGCAGCTTATGTCAGATGA...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGATTTCCCGAGGCACATaGTCCTTGGTCCATTTATCC +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVISRGT*SLVHLS
Trigger: GGATAAATGGACCAAGGAGCATGTGCCTCGGGAAAT...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGCCATTTGCTGGTCTCTaGTGCCATTTCCCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMPFAGL*CHFPRH
Trigger: GTGCCTCGGGAAATGGCAGCAGAGACCAGCAAATGG...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTACACTGGTGATTCCTaGTCATCCAAACGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVYTGDS*SSKRRF
Trigger: GAAGCGACGTTTGGATGACCAGGAATCACCAGTGTA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGCTGAAACCTGGTAGTTaGGTGCCACTGAGTACTGAA +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVLKPGS*VPLSTE
Trigger: TTCAGTACTCAGTGGCACCCAACTACCAGGTTTCAG...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATGATCAGATCAGGGTaGCCTTTAAATAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVMIRSG*PLNSWD
Trigger: GTCCCAGCTATTTAAAGGCCACCCTGATCTGATCAT...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCGTATGTGCTTGTAGTTaGGAAGGCTTGCTGACTTTG +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFVCACS*EGLLTL
Trigger: CAAAGTCAGCAAGCCTTCCCAACTACAAGCACATAC...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATAAAGCACTGAGCTGTTaGCATCTGGCAGGAACTGTC +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHKALSC*HLAGTV
Trigger: GACAGTTCCTGCCAGATGCCAACAGCTCAGTGCTTT...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAAAAGCACTGAGCTGTTaGCATCTGGCAGGAACTGTC +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQKALSC*HLAGTV
Trigger: GACAGTTCCTGCCAGATGCCAACAGCTCAGTGCTTT...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAATGGAGTGCTTTTCGATaGATGACTTCGGACGTGCCT +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQWSAFR*MTSDVP
Trigger: AGGCACGTCCGAAGTCATCCATCGAAAAGCACTCCA...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTGCCTCTTCACATGGTaGATAATCAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVCLFTW*IIRAAA
Trigger: TGCTGCTGCTCTGATTATCCACCATGTGAAGAGGCA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGTTTGCCTCTTCACATaGTGGATAATCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVVCLFT*WIIRAA
Trigger: TGCTGCTCTGATTATCCACCATGTGAAGAGGCAAAC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGATTTGCCGTTCAGCTTaGGAACAAATCCGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVICRSA*EQIRSS
Trigger: GCTGCTACGGATTTGTTCCCAAGCTGAACGGCAAAT...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCCTTGGGAGAAATACTaGTTTCTGTGCCAGATGTTC +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFPWEKY*FLCQMF
Trigger: GAACATCTGGCACAGAAACCAGTATTTCTCCCAAGG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCACGCCGCAAATTCCTTaGGAGAAATACTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFTPQIP*EKYWFL
Trigger: CAGAAACCAGTATTTCTCCCAAGGAATTTGCGGCGT...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGGTAGTTGGGTGCCACTaGGTACTGAATGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMVVGCH*VLNACS
Trigger: GCTACAGGCATTCAGTACTCAGTGGCACCCAACTAC...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGACTTTGTGGCACAGCTaGAACCTGGTAGTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMTLWHS*NLVVGC
Trigger: GCACCCAACTACCAGGTTTCAGCTGTGCCACAAAGT...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCGAGAGATCACCTCCTaGTTAAAGATAACAAGGCAA +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFREITS*LKITRQ
Trigger: TTGCCTTGTTATCTTTAATCAGGAGGTGATCTCTCG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCTATTTGTCCTCTTTCTaGATGCCTGTTTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFYLSSF*MPVCLF
Trigger: GAAGAGGCAAACAGGCATTCAGAAAGAGGACAAATA...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGCTCTTCTTCCACATCTaGGAGATCGCCTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMLFFHI*EIASLS
Trigger: GCTCAGAGAGGCGATCTCTCAGATGTGGAAGAAGAG...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCTGTAGGCATGAATGGTaGACATCTCTCTCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVCRHEW*TSLSVN
Trigger: ATTCACTGAGAGAGATGTTCACCATTCATGCCTACA...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATGAAGCAGTTCTCATCTaGCATAAGCTGCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDEAVLI*HKLLCL
Trigger: AAGGCAGAGCAGCTTATGTCAGATGAGAACTGCTTC...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATGAAGCAGTTCTCATCTaGCATAAGCTGCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHEAVLI*HKLLCL
Trigger: AAGGCAGAGCAGCTTATGTCAGATGAGAACTGCTTC...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCTATAGGAGTTCAGCTTaGACCTACACTCCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVYRSSA*TYTPAY
Trigger: ATAAGCTGGAGTGTAGGTTCAAGCTGAACTCCTATA...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTTCCAACACCATGCTTaGTGGCATCTGCCATTGAAG +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHFQHHA*WHLPLK
Trigger: CTTCAATGGCAGATGCCAGCAAGCATGGTGTTGGAA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTGAGGAGTCCGTCCCGTaGACTTGGGCTGCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVEESVP*TWAAGN
Trigger: GTTACCAGCAGCCCAAGTGCACGGGACGGACTCCTC...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGATTGTGCTTCTTAGGTaGTCCTGTTGCTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVIVLLR*SCCFIH
Trigger: GTGGATGAAGCAACAGGAGCACCTAAGAAGCACAAT...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTCTTGTCTCGCTTTATaGCTAGCACCTCCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMSCLAL*LAPPVP
Trigger: GGGAACGGGAGGTGCTAGGCATAAAGCGAGACAAGA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAATCATCTGACATAAGCTaGTCTGCCTTCCGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQSSDIS*SAFRWY
Trigger: ATACCAGCGGAAGGCAGAGCAGCTTATGTCAGATGA...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGGCTGATGCAGACGCTTaGTTACACGCTCATGGGACT +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMADADA*LHAHGT
Trigger: AGTCCCATGAGCGTGTAAGCAAGCGTCTGCATCAGC...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAATTTCCCGAGGCACATaGTCCTTGGTCCATTTATCC +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQISRGT*SLVHLS
Trigger: GGATAAATGGACCAAGGAGCATGTGCCTCGGGAAAT...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAATACACTGGTGATTCCTaGTCATCCAAACGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQYTGDS*SSKRRF
Trigger: GAAGCGACGTTTGGATGACCAGGAATCACCAGTGTA...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTACACTGGTGATTCCTaGTCATCCAAACGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHYTGDS*SSKRRF
Trigger: GAAGCGACGTTTGGATGACCAGGAATCACCAGTGTA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGGGAATCCTTCGCTGCTaGGCTGCATACACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMGILRC*AAYTGD
Trigger: ATCACCAGTGTATGCAGCCCAGCAGCGAAGGATTCC...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATCTGAAACCTGGTAGTTaGGTGCCACTGAGTACTGAA +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDLKPGS*VPLSTE
Trigger: TTCAGTACTCAGTGGCACCCAACTACCAGGTTTCAG...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAACTGAAACCTGGTAGTTaGGTGCCACTGAGTACTGAA +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQLKPGS*VPLSTE
Trigger: TTCAGTACTCAGTGGCACCCAACTACCAGGTTTCAG...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGAGGCTGGACAGCTGTTaGGTGATGATGGCTGCTATG +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMRLDSC*VMMAAM
Trigger: CATAGCAGCCATCATCACCCAACAGCTGTCCAGCCT...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGATGATCAGATCAGGGTaGCCTTTAAATAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVMIRSG*PLNSWD
Trigger: GTCCCAGCTATTTAAAGGCCACCCTGATCTGATCAT...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGGCTGGATGCCATGGGTaGGAATCTGATGAACTTGGC +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMAGCHG*ESDELG
Trigger: GCCAAGTTCATCAGATTCCCACCCATGGCATCCAGC...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGGTATGTGCTTGTAGTTaGGAAGGCTTGCTGACTTTG +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVVCACS*EGLLTL
Trigger: CAAAGTCAGCAAGCCTTCCCAACTACAAGCACATAC...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAATTGCTCAGTCAAAGCTaGAGTGTAGTTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQLLSQS*SVVSSS
Trigger: GCTGGAGGAAACTACACTCCAGCTTTGACTGAGCAA...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGACAACAAATCTTCCTaGTTTTTGAAGAGTCGAGCC +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVDNKSS*FLKSRA
Trigger: GGCTCGACTCTTCAAAAACCAGGAAGATTTGTTGTC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCGACAACAAATCTTCCTaGTTTTTGAAGAGTCGAGCC +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFDNKSS*FLKSRA
Trigger: GGCTCGACTCTTCAAAAACCAGGAAGATTTGTTGTC...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCTTCACAGTGCCTCCATaGTCATTTCTCACAGAATCA +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFFTVPP*SFLTES
Trigger: TGATTCTGTGAGAAATGACCATGGAGGCACTGTGAA...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGGGCAGCCATTCTGACTaGGCCTCTGTGGCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMGSHSD*ASVACY
Trigger: ATAACAAGCCACAGAGGCCCAGTCAGAATGGCTGCC...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATCAACACCATGCTTGCTaGCATCTGCCATTGAAGACT +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHQHHAC*HLPLKT
Trigger: AGTCTTCAATGGCAGATGCCAGCAAGCATGGTGTTG...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAACAACACCATGCTTGCTaGCATCTGCCATTGAAGACT +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQQHHAC*HLPLKT
Trigger: AGTCTTCAATGGCAGATGCCAGCAAGCATGGTGTTG...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAGTCTTCAGACCAAGATaGGAAGGAAACCCAGGTATC +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQVFRPR*EGNPGI
Trigger: GATACCTGGGTTTCCTTCCCATCTTGGTCTGAAGAC...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATGTCTTCAGACCAAGATaGGAAGGAAACCCAGGTATC +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHVFRPR*EGNPGI
Trigger: GATACCTGGGTTTCCTTCCCATCTTGGTCTGAAGAC...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTGCCTCTTCACATGGTaGATAATCAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHCLFTW*IIRAAA
Trigger: TGCTGCTGCTCTGATTATCCACCATGTGAAGAGGCA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGTTTGCCTCTTCACATaGTGGATAATCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVVCLFT*WIIRAA
Trigger: TGCTGCTCTGATTATCCACCATGTGAAGAGGCAAAC...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATATTTGCCGTTCAGCTTaGGAACAAATCCGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHICRSA*EQIRSS
Trigger: GCTGCTACGGATTTGTTCCCAAGCTGAACGGCAAAT...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATATTTGCCGTTCAGCTTaGGAACAAATCCGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDICRSA*EQIRSS
Trigger: GCTGCTACGGATTTGTTCCCAAGCTGAACGGCAAAT...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCTTGGGAGAAATACTaGTTTCTGTGCCAGATGTTC +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVPWEKY*FLCQMF
Trigger: GAACATCTGGCACAGAAACCAGTATTTCTCCCAAGG...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGGAGGCACATGCTCCTTaGTCCATTTATCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMEAHAP*SIYPPR
Trigger: CCTGGGTGGATAAATGGACCAAGGAGCATGTGCCTC...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
3UTR CAA 72 bp CCATGGGAGCTAAAAAGGAGGACTGACTGGAATTTGTaGAGGCCGAGAACCAGAAGAGGGAAGAAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: PWELKRRTDWNL*RPRTRRGKKVN
Trigger: GTTCACCTTCTTCCCTCTTCTGGTTCTCGGCCTCAACAAATTCCAGTCAGTCCTCCTTTTTAGCTCCCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTGTTGGGAAGGCTTGCTaGCTTTGGCAGCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVVGKAC*LWQLWA
Trigger: AGCCCACAGCTGCCAAAGTCAGCAAGCCTTCCCAAC...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCGAGAGATCACCTCCTaGTTAAAGATAACAAGGCAA +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVREITS*LKITRQ
Trigger: TTGCCTTGTTATCTTTAATCAGGAGGTGATCTCTCG...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTGTAGGCATGAATGGTaGACATCTCTCTCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVCRHEW*TSLSVN
Trigger: ATTCACTGAGAGAGATGTTCACCATTCATGCCTACA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGTGTAGGCATGAATGGTaGACATCTCTCTCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVCRHEW*TSLSVN
Trigger: ATTCACTGAGAGAGATGTTCACCATTCATGCCTACA...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATGCTCTCGACCACGTTaGCACTTCCGGATACGCCGC +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLCSRPR*HFRIRR
Trigger: GCGGCGTATCCGGAAGTGTCAACGTGGTCGAGAGCA...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTATAGGAGTTCAGCTTaGACCTACACTCCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVYRSSA*TYTPAY
Trigger: ATAAGCTGGAGTGTAGGTTCAAGCTGAACTCCTATA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCTCTCAGCAGTTGTTTTaGTTAAAAGCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFSQQLF*LKALSC
Trigger: ACAGCTCAGTGCTTTTAAGCAAAACAACTGCTGAGA...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGGTTTTCATAGGCCTCTaGACTCCGAAGAGCCTTTCG +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMVFIGL*TPKSLS
Trigger: CGAAAGGCTCTTCGGAGTGCAGAGGCCTATGAAAAC...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGAGGAGTCCGTCCCGTaGACTTGGGCTGCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLEESVP*TWAAGN
Trigger: GTTACCAGCAGCCCAAGTGCACGGGACGGACTCCTC...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGGTGATGAGTCTATGTTaGCATCAAGCAGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMVMSLC*HQAGSA
Trigger: TGCGGAGCCTGCTTGATGGCAACATAGACTCATCAC...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTATCACAGGTGGTGGTaGAGGGTACCAGGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVYHRWW*RVPGPR
Trigger: TCGAGGGCCTGGTACCCTGCACCACCACCTGTGATA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCTTAATGCTCACAAAGTaGAGAGTCTCTGTATCACAG +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVLMLTK*RVSVSQ
Trigger: CTGTGATACAGAGACTCTGCACTTTGTGAGCATTAA...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCTTAATGCTCACAAAGTaGAGAGTCTCTGTATCACAG +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFLMLTK*RVSVSQ
Trigger: CTGTGATACAGAGACTCTGCACTTTGTGAGCATTAA...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGGTGCTGGGTGGGCATaGCTCTGGACCACCTGGCCT +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARGAGWA*LWTTWP
Trigger: AGGCCAGGTGGTCCAGAGCCATGCCCACCCAGCACC...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATATGATCAGATCAGGGTaGCCTTTAAATAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDMIRSG*PLNSWD
Trigger: GTCCCAGCTATTTAAAGGCCACCCTGATCTGATCAT...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATATGATCAGATCAGGGTaGCCTTTAAATAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHMIRSG*PLNSWD
Trigger: GTCCCAGCTATTTAAAGGCCACCCTGATCTGATCAT...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTCTGGCTGAGCAGGAGTaGGAGCTGACTGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVLAEQE*ELTGMK
Trigger: CTTCATCCCAGTCAGCTCCCACTCCTGCTCAGCCAG...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATGTATGTGCTTGTAGTTaGGAAGGCTTGCTGACTTTG +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDVCACS*EGLLTL
Trigger: CAAAGTCAGCAAGCCTTCCCAACTACAAGCACATAC...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTGCATATGGTGGGAGTaGGGGAGTCTGCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVCIWWE*GSLLTG
Trigger: GCCAGTCAGCAGACTCCCCCACTCCCACCATATGCA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTGTGTGAGGCTGGACTaGTGGAGAACGTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVCVRLD*WRTWGC
Trigger: GCATCCCCACGTTCTCCACCAGTCCAGCCTCACACA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGATTGTTTTGCAAAGATaGAGCTGTCCCCAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVIVLQR*SCPQGD
Trigger: ATCTCCTTGGGGACAGCTCCATCTTTGCAAAACAAT...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTGCTTTGTAGATGTCTaGTTGGCCCTGGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDCFVDV*LALESV
Trigger: AACAGATTCCAGGGCCAACCAGACATCTACAAAGCA...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTGCTTTGTAGATGTCTaGTTGGCCCTGGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHCFVDV*LALESV
Trigger: AACAGATTCCAGGGCCAACCAGACATCTACAAAGCA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGTTCCGCTGTTCTTTCTaGTATGTGTGCAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVFRCSF*YVCKIS
Trigger: GGAGATTTTGCACACATACCAGAAAGAACAGCGGAA...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGTTCACAGTGCCTCCATaGTCATTTCTCACAGAATCA +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVFTVPP*SFLTES
Trigger: TGATTCTGTGAGAAATGACCATGGAGGCACTGTGAA...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTATCCAAGCGAAATTTaGCTTGTTCCTCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVYPSEI*LVPQQT
Trigger: TGTCTGCTGAGGAACAAGCCAAATTTCGCTTGGATA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTCAGCATATATCCTCTaGAGTGCTTTTCGATGGATG +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVSAYIL*SAFRWM
Trigger: CATCCATCGAAAAGCACTCCAGAGGATATATGCTGA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATGTTTGCCTCTTCACATaGTGGATAATCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDVCLFT*WIIRAA
Trigger: TGCTGCTCTGATTATCCACCATGTGAAGAGGCAAAC...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAGTTTGCCTCTTCACATaGTGGATAATCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQVCLFT*WIIRAA
Trigger: TGCTGCTCTGATTATCCACCATGTGAAGAGGCAAAC...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCCATGTCCAGGAAAGCTaGGTAATAATCTTCTACATC +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVHVQES*VIIFYI
Trigger: GATGTAGAAGATTATTACCCAGCTTTCCTGGACATG...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATCCTTGGGAGAAATACTaGTTTCTGTGCCAGATGTTC +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDPWEKY*FLCQMF
Trigger: GAACATCTGGCACAGAAACCAGTATTTCTCCCAAGG...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAACGCCGCAAATTCCTTaGGAGAAATACTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQTPQIP*EKYWFL
Trigger: CAGAAACCAGTATTTCTCCCAAGGAATTTGCGGCGT...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAAGGACCCGGTGCTGGTaGGAAAAAGCCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLRTRCW*EKASVL
Trigger: GAGCACAGAGGCTTTTTCTCACCAGCACCGGGTCCT...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGTTGGGAAGGCTTGCTaGCTTTGGCAGCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLVGKAC*LWQLWA
Trigger: AGCCCACAGCTGCCAAAGTCAGCAAGCCTTCCCAAC...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATCGAGAGATCACCTCCTaGTTAAAGATAACAAGGCAA +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDREITS*LKITRQ
Trigger: TTGCCTTGTTATCTTTAATCAGGAGGTGATCTCTCG...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTATTTGTCCTCTTTCTaGATGCCTGTTTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHYLSSF*MPVCLF
Trigger: GAAGAGGCAAACAGGCATTCAGAAAGAGGACAAATA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCTCAAGCAGAGAATTTaGTGCAGTCGCATAAAGATA +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVLKQRI*CSRIKI
Trigger: TATCTTTATGCGACTGCATCAAATTCTCTGCTTGAG...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGCTCAAGCAGAGAATTTaGTGCAGTCGCATAAAGATA +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVLKQRI*CSRIKI
Trigger: TATCTTTATGCGACTGCATCAAATTCTCTGCTTGAG...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTGTAGGCATGAATGGTaGACATCTCTCTCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDCRHEW*TSLSVN
Trigger: ATTCACTGAGAGAGATGTTCACCATTCATGCCTACA...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTATAGGAGTTCAGCTTaGACCTACACTCCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHYRSSA*TYTPAY
Trigger: ATAAGCTGGAGTGTAGGTTCAAGCTGAACTCCTATA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCTGTAGTCCTCCGATTTaGTCACATATACCATCTTAT +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVCSPPI*SHIPSY
Trigger: ATAAGATGGTATATGTGATCAAATCGGAGGACTACA...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTACAGGCCTGGAACCGCTaGTGCAGACGCTTGCTTACA +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLQAWNR*CRRLLT
Trigger: TGTAAGCAAGCGTCTGCATCAGCGGTTCCAGGCCTG...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTCCAGGAATCCTTCGCTaGTGGGCTGCATACACTGGT +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVPGILR*WAAYTG
Trigger: ACCAGTGTATGCAGCCCAGCAGCGAAGGATTCCTGG...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTGCTGCTATGAACTGCTaGTATGGCGGGCCCATGACT +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVAAMNC*YGGPMT
Trigger: AGTCATGGGCCCGCCATAGCAGCAGTTCATAGCAGC...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTACTGTCCCTGTACTGGTaGAACTGGTGGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLLSLYW*NWWCWV
Trigger: CACCCAGCACCACCAGTTGCACCAGTACAGGGACAG...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCAAAATCTCCAAGAATaGTTTGTAGATGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFQNLQE*FVDVWL
Trigger: CAACCAGACATCTACAAAGCATTCTTGGAGATTTTG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGTCTCAGCAGTTGTTTTaGTTAAAAGCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVSQQLF*LKALSC
Trigger: ACAGCTCAGTGCTTTTAAGCAAAACAACTGCTGAGA...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGATATATCCTCTGGAGTaGTTTTCGATGGATGACTTC +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVIYPLE*FSMDDF
Trigger: GAAGTCATCCATCGAAAAGCACTCCAGAGGATATAT...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGATATATCCTCTGGAGTaGTTTTCGATGGATGACTTC +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVIYPLE*FSMDDF
Trigger: GAAGTCATCCATCGAAAAGCACTCCAGAGGATATAT...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTCCATTTGCTGGTCTCTaGTGCCATTTCCCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVPFAGL*CHFPRH
Trigger: GTGCCTCGGGAAATGGCAGCAGAGACCAGCAAATGG...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGTTAATGCTCACAAAGTaGAGAGTCTCTGTATCACAG +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVLMLTK*RVSVSQ
Trigger: CTGTGATACAGAGACTCTGCACTTTGTGAGCATTAA...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTACACTGGTGATTCCTaGTCATCCAAACGTCGCTTC +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMYTGDS*SSKRRF
Trigger: GAAGCGACGTTTGGATGACCAGGAATCACCAGTGTA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTATGAACTGCTGCTATaGCGGGCCCATGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVYELLL*RAHDCQ
Trigger: CTGGCAGTCATGGGCCCGCCATAGCAGCAGTTCATA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGGAGTGGGAGCTGACTaGGATGAAGGCTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLGVGAD*DEGWEG
Trigger: TCCTTCCCAGCCTTCATCCCAGTCAGCTCCCACTCC...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATGCATATGGTGGGAGTaGGGGAGTCTGCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLCIWWE*GSLLTG
Trigger: GCCAGTCAGCAGACTCCCCCACTCCCACCATATGCA...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTGACTGGTGGAGAACGTaGGGATGCATATGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVDWWRT*GCIWWE
Trigger: CTCCCACCATATGCATCCCCACGTTCTCCACCAGTC...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATATTGTTTTGCAAAGATaGAGCTGTCCCCAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHIVLQR*SCPQGD
Trigger: ATCTCCTTGGGGACAGCTCCATCTTTGCAAAACAAT...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAATTGTTTTGCAAAGATaGAGCTGTCCCCAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQIVLQR*SCPQGD
Trigger: ATCTCCTTGGGGACAGCTCCATCTTTGCAAAACAAT...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAATGTCTGGTTGGCCCTaGAATCTGTTCTTGATCTTA +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQMSGWP*NLFLIL
Trigger: TAAGATCAAGAACAGATTCCAGGGCCAACCAGACAT...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATATGTCTGGTTGGCCCTaGAATCTGTTCTTGATCTTA +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHMSGWP*NLFLIL
Trigger: TAAGATCAAGAACAGATTCCAGGGCCAACCAGACAT...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTTCACAGTGCCTCCATaGTCATTTCTCACAGAATCA +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHFTVPP*SFLTES
Trigger: TGATTCTGTGAGAAATGACCATGGAGGCACTGTGAA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGCAACACCATGCTTGCTaGCATCTGCCATTGAAGACT +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMQHHAC*HLPLKT
Trigger: AGTCTTCAATGGCAGATGCCAGCAAGCATGGTGTTG...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTATCCAAGCGAAATTTaGCTTGTTCCTCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHYPSEI*LVPQQT
Trigger: TGTCTGCTGAGGAACAAGCCAAATTTCGCTTGGATA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTATCCAAGCGAAATTTaGCTTGTTCCTCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDYPSEI*LVPQQT
Trigger: TGTCTGCTGAGGAACAAGCCAAATTTCGCTTGGATA...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAATATCCAAGCGAAATTTaGCTTGTTCCTCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQYPSEI*LVPQQT
Trigger: TGTCTGCTGAGGAACAAGCCAAATTTCGCTTGGATA...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTCTCTGTATCACAGGTaGTGGTGCAGGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVSLYHR*WCRVPG
Trigger: GCCTGGTACCCTGCACCACCACCTGTGATACAGAGA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGGGAGTATCAATGCTCTaGGATTTAAATTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVGVSML*DLNSFM
Trigger: CATGAAGGAATTTAAATCTCAGAGCATTGATACTCC...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTCTCTTCTTCCACATCTaGGAGATCGCCTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVLFFHI*EIASLS
Trigger: GCTCAGAGAGGCGATCTCTCAGATGTGGAAGAAGAG...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAACTCAAGCAGAGAATTTaGTGCAGTCGCATAAAGATA +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQLKQRI*CSRIKI
Trigger: TATCTTTATGCGACTGCATCAAATTCTCTGCTTGAG...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTCATGGTCTCAGACACTaGTTCATACACAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVHGLRH*FIHRRG
Trigger: GCCCCTCCTGTGTATGAAGCAGTGTCTGAGACCATG...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGCTGCTATGAACTGCTaGTATGGCGGGCCCATGACT +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLAAMNC*YGGPMT
Trigger: AGTCATGGGCCCGCCATAGCAGCAGTTCATAGCAGC...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGCAAAATCTCCAAGAATaGTTTGTAGATGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVQNLQE*FVDVWL
Trigger: CAACCAGACATCTACAAAGCATTCTTGGAGATTTTG...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTCTTTCTGGTATGTGTaGAAAATCTCCAAGAATGCT +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVSFWYV*KISKNA
Trigger: AGCATTCTTGGAGATTTTGCACACATACCAGAAAGA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTCTCAGCAGTTGTTTTaGTTAAAAGCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHSQQLF*LKALSC
Trigger: ACAGCTCAGTGCTTTTAAGCAAAACAACTGCTGAGA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAATATATCCTCTGGAGTaGTTTTCGATGGATGACTTC +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQIYPLE*FSMDDF
Trigger: GAAGTCATCCATCGAAAAGCACTCCAGAGGATATAT...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGATCGATGATATCAGCTaGTTTGTCAGCATATATCCT +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVIDDIS*FVSIYP
Trigger: AGGATATATGCTGACAAAGCAGCTGATATCATCGAT...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGATCGATGATATCAGCTaGTTTGTCAGCATATATCCT +
Preference number: 4 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVIDDIS*FVSIYP
Trigger: AGGATATATGCTGACAAAGCAGCTGATATCATCGAT...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGATTGTGCTTCTTAGGTaGTCCTGTTGCTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMIVLLR*SCCFIH
Trigger: GTGGATGAAGCAACAGGAGCACCTAAGAAGCACAAT...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCTCCGTTATTGTTTTCTaGCAAGTAAAGATCAGTAAC +
Preference number: 4 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVSVIVF*QVKISN
Trigger: GTTACTGATCTTTACTTGGCAGAAAACAATAACGGA...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCTCCGTTATTGTTTTCTaGCAAGTAAAGATCAGTAAC +
Preference number: 4 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFSVIVF*QVKISN
Trigger: GTTACTGATCTTTACTTGGCAGAAAACAATAACGGA...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTTAATGCTCACAAAGTaGAGAGTCTCTGTATCACAG +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDLMLTK*RVSVSQ
Trigger: CTGTGATACAGAGACTCTGCACTTTGTGAGCATTAA...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATATGAACTGCTGCTATaGCGGGCCCATGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLYELLL*RAHDCQ
Trigger: CTGGCAGTCATGGGCCCGCCATAGCAGCAGTTCATA...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGGTATGTGCTTGTAGTTaGGAAGGCTTGCTGACTTTG +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMVCACS*EGLLTL
Trigger: CAAAGTCAGCAAGCCTTCCCAACTACAAGCACATAC...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTGCTTTGTAGATGTCTaGTTGGCCCTGGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMCFVDV*LALESV
Trigger: AACAGATTCCAGGGCCAACCAGACATCTACAAAGCA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTGGCAGCCATTCTGACTaGGCCTCTGTGGCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVGSHSD*ASVACY
Trigger: ATAACAAGCCACAGAGGCCCAGTCAGAATGGCTGCC...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTCAATCGGAACAGCAATaGAGGGGTTCTTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVQSEQQ*RGSSSG
Trigger: GCCTGAGGAAGAACCCCTCCATTGCTGTTCCGATTG...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGAGGTCAGGAATGAAATaGTGCATGATTTGCTTGATT +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVRSGMK*CMICLI
Trigger: AATCAAGCAAATCATGCACCATTTCATTCCTGACCT...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATCATGTCCAGGAAAGCTaGGTAATAATCTTCTACATC +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHHVQES*VIIFYI
Trigger: GATGTAGAAGATTATTACCCAGCTTTCCTGGACATG...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGCCTTGGGAGAAATACTaGTTTCTGTGCCAGATGTTC +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMPWEKY*FLCQMF
Trigger: GAACATCTGGCACAGAAACCAGTATTTCTCCCAAGG...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTCTCTACATTTTCCATaGTCTTCTTGCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVSLHFP*SSCCFL
Trigger: AAGGAAACAGCAAGAAGACCATGGAAAATGTAGAGA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAACTTTGTGGCACAGCTaGAACCTGGTAGTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLTLWHS*NLVVGC
Trigger: GCACCCAACTACCAGGTTTCAGCTGTGCCACAAAGT...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATGGAGTATCAATGCTCTaGGATTTAAATTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHGVSML*DLNSFM
Trigger: CATGAAGGAATTTAAATCTCAGAGCATTGATACTCC...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAAGTGGGGGAGTCTGCTaGCTGGCTGGAGTATGTGCT +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARSGGVC*LAGVCA
Trigger: AGCACATACTCCAGCCAGTCAGCAGACTCCCCCACT...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAATCTTCCTGGTTTTTaGAGAGTCGAGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVNLPGF*RVEPPG
Trigger: CCCAGGTGGCTCGACTCTTCAAAAACCAGGAAGATT...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTATTTGTCCTCTTTCTaGATGCCTGTTTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMYLSSF*MPVCLF
Trigger: GAAGAGGCAAACAGGCATTCAGAAAGAGGACAAATA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATATCCCTCTTAACTTTTaGGCTGCTGTGTTACTAAAT +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDIPLNF*AAVLLN
Trigger: ATTTAGTAACACAGCAGCTCAAAAGTTAAGAGGGAT...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAATGTAGTCCTCCGATTTaGTCACATATACCATCTTAT +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQCSPPI*SHIPSY
Trigger: ATAAGATGGTATATGTGATCAAATCGGAGGACTACA...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACAGGCCTGGAACCGCTaGTGCAGACGCTTGCTTACA +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARQAWNR*CRRLLT
Trigger: TGTAAGCAAGCGTCTGCATCAGCGGTTCCAGGCCTG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTGAGAAAAAGCCTCTGTaGTCCCAGGAATCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVEKKPL*SQESFA
Trigger: AGCGAAGGATTCCTGGGAGCACAGAGGCTTTTTCTC...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTACATGGTCTCAGACACTaGTTCATACACAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLHGLRH*FIHRRG
Trigger: GCCCCTCCTGTGTATGAAGCAGTGTCTGAGACCATG...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATGCCTGTAGCTGACTaGATGGTCTCAGACACTGCT +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVMPVAD*MVSDTA
Trigger: AGCAGTGTCTGAGACCATGCAGTCAGCTACAGGCAT...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTCTTTCTGGTATGTGTaGAAAATCTCCAAGAATGCT +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHSFWYV*KISKNA
Trigger: AGCATTCTTGGAGATTTTGCACACATACCAGAAAGA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTTCTGGTATGTGTaGAAAATCTCCAAGAATGCT +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDSFWYV*KISKNA
Trigger: AGCATTCTTGGAGATTTTGCACACATACCAGAAAGA...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTGGGCATACACCTCTTaGTCAGTCAAAGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVWAYTS*SVKAGV
Trigger: CACTCCAGCTTTGACTGAGCAAGAGGTGTATGCCCA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATATCGATGATATCAGCTaGTTTGTCAGCATATATCCT +
Preference number: 4 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHIDDIS*FVSIYP
Trigger: AGGATATATGCTGACAAAGCAGCTGATATCATCGAT...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAAGGCTGGACAGCTGTTaGGTGATGATGGCTGCTATG +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLRLDSC*VMMAAM
Trigger: CATAGCAGCCATCATCACCCAACAGCTGTCCAGCCT...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACTGTACTGGTGCAACTaGTGGTGCTGGGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARLYWCN*WCWVGM
Trigger: CATGCCCACCCAGCACCACCAGTTGCACCAGTACAG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACTGCTGTCCCTGTACTaGTGCAACTGGTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARLLSLY*CNWWCW
Trigger: CCAGCACCACCAGTTGCACCAGTACAGGGACAGCAG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACTGGCTGAGCAGGAGTaGGAGCTGACTGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARLAEQE*ELTGMK
Trigger: CTTCATCCCAGTCAGCTCCCACTCCTGCTCAGCCAG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGATGGGGATGCATATGGTaGGAGTGGGGGAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARWGCIW*EWGSLL
Trigger: CAGCAGACTCCCCCACTCCCACCATATGCATCCCCA...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGATGTCTGGTTGGCCCTaGAATCTGTTCTTGATCTTA +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMMSGWP*NLFLIL
Trigger: TAAGATCAAGAACAGATTCCAGGGCCAACCAGACAT...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAAAGCACTGAGCTGTTaGCATCTGGCAGGAACTGTC +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVKALSC*HLAGTV
Trigger: GACAGTTCCTGCCAGATGCCAACAGCTCAGTGCTTT...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTTCACAGTGCCTCCATaGTCATTTCTCACAGAATCA +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMFTVPP*SFLTES
Trigger: TGATTCTGTGAGAAATGACCATGGAGGCACTGTGAA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTGGAGTGCTTTTCGATaGATGACTTCGGACGTGCCT +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVWSAFR*MTSDVP
Trigger: AGGCACGTCCGAAGTCATCCATCGAAAAGCACTCCA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTCAGCATATATCCTCTaGAGTGCTTTTCGATGGATG +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMSAYIL*SAFRWM
Trigger: CATCCATCGAAAAGCACTCCAGAGGATATATGCTGA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTACAATCGGAACAGCAATaGAGGGGTTCTTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLQSEQQ*RGSSSG
Trigger: GCCTGAGGAAGAACCCCTCCATTGCTGTTCCGATTG...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATAGGTCAGGAATGAAATaGTGCATGATTTGCTTGATT +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDRSGMK*CMICLI
Trigger: AATCAAGCAAATCATGCACCATTTCATTCCTGACCT...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAATCTCTACATTTTCCATaGTCTTCTTGCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQSLHFP*SSCCFL
Trigger: AAGGAAACAGCAAGAAGACCATGGAAAATGTAGAGA...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGAGGCACATGCTCCTTaGTCCATTTATCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLEAHAP*SIYPPR
Trigger: CCTGGGTGGATAAATGGACCAAGGAGCATGTGCCTC...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACTGTATCACAGGTGGTaGTGCAGGGTACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARLYHRW*CRVPGP
Trigger: AGGGCCTGGTACCCTGCACCACCACCTGTGATACAG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGATCCACCTTGAGCCTCTaGAACTGCTGCTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARSTLSL*NCCCPC
Trigger: ACAGGGACAGCAGCAGTTTCAGAGGCTCAAGGTGGA...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATTGTTGAAGCCTCTCTaGGCTTCTCGCCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLLLKPL*ASRHSS
Trigger: AGAAGAGTGGCGAGAAGCTCAGAGAGGCTTCAACAA...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACTCGCCAGACCTTGTTaGAGCCTCTCTGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARLARPC*SLSELL
Trigger: GAGAAGCTCAGAGAGGCTTCAACAAGGTCTGGCGAG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGCTCAAGCAGAGAATTTaGTGCAGTCGCATAAAGATA +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMLKQRI*CSRIKI
Trigger: TATCTTTATGCGACTGCATCAAATTCTCTGCTTGAG...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAATGGCTGCTATGAACTaGTGCTATGGCGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARMAAMN*CYGGPM
Trigger: CATGGGCCCGCCATAGCAGCAGTTCATAGCAGCCAT...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTCTCAGCAGTTGTTTTaGTTAAAAGCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMSQQLF*LKALSC
Trigger: ACAGCTCAGTGCTTTTAAGCAAAACAACTGCTGAGA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGTTTTCATAGGCCTCTaGACTCCGAAGAGCCTTTCG +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLVFIGL*TPKSLS
Trigger: CGAAAGGCTCTTCGGAGTGCAGAGGCCTATGAAAAC...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGATATATCCTCTGGAGTaGTTTTCGATGGATGACTTC +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMIYPLE*FSMDDF
Trigger: GAAGTCATCCATCGAAAAGCACTCCAGAGGATATAT...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCCGTTATTGTTTTCTaGCAAGTAAAGATCAGTAAC +
Preference number: 4 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDSVIVF*QVKISN
Trigger: GTTACTGATCTTTACTTGGCAGAAAACAATAACGGA...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTCATCTGACATAAGCTaGTCTGCCTTCCGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVSSDIS*SAFRWY
Trigger: ATACCAGCGGAAGGCAGAGCAGCTTATGTCAGATGA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGACTGGTGGAGAACGTaGGGATGCATATGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARDWWRT*GCIWWE
Trigger: CTCCCACCATATGCATCCCCACGTTCTCCACCAGTC...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTGCCTCTTCACATGGTaGATAATCAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVCLFTW*IIRAAA
Trigger: TGCTGCTGCTCTGATTATCCACCATGTGAAGAGGCA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGCATGTCCAGGAAAGCTaGGTAATAATCTTCTACATC +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMHVQES*VIIFYI
Trigger: GATGTAGAAGATTATTACCCAGCTTTCCTGGACATG...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGATCTCTGTATCACAGGTaGTGGTGCAGGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARSLYHR*WCRVPG
Trigger: GCCTGGTACCCTGCACCACCACCTGTGATACAGAGA...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGTAGTTGGGTGCCACTaGGTACTGAATGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARVVGCH*VLNACS
Trigger: GCTACAGGCATTCAGTACTCAGTGGCACCCAACTAC...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGGGAGTATCAATGCTCTaGGATTTAAATTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMGVSML*DLNSFM
Trigger: CATGAAGGAATTTAAATCTCAGAGCATTGATACTCC...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGATCCCTCTTAACTTTTaGGCTGCTGTGTTACTAAAT +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMIPLNF*AAVLLN
Trigger: ATTTAGTAACACAGCAGCTCAAAAGTTAAGAGGGAT...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACTCCAGAAGGCTCCTTaGAGTCTGACTGTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARLQKAP*SLTVEL
Trigger: CAGCTCAACAGTCAGACTTCAAGGAGCCTTCTGGAG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTGTAGTCCTCCGATTTaGTCACATATACCATCTTAT +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMCSPPI*SHIPSY
Trigger: ATAAGATGGTATATGTGATCAAATCGGAGGACTACA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATTCCAACACCATGCTTaGTGGCATCTGCCATTGAAG +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLFQHHA*WHLPLK
Trigger: CTTCAATGGCAGATGCCAGCAAGCATGGTGTTGGAA...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGGAATCCTTCGCTGCTaGGCTGCATACACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARGILRC*AAYTGD
Trigger: ATCACCAGTGTATGCAGCCCAGCAGCGAAGGATTCC...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAAGGCTGGACAGCTGTTaGGTGATGATGGCTGCTATG +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARRLDSC*VMMAAM
Trigger: CATAGCAGCCATCATCACCCAACAGCTGTCCAGCCT...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATGATCAGATCAGGGTaGCCTTTAAATAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVMIRSG*PLNSWD
Trigger: GTCCCAGCTATTTAAAGGCCACCCTGATCTGATCAT...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGGGGAGTCTGCTGACTaGCTGGAGTATGTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARGESAD*LEYVLV
Trigger: TACAAGCACATACTCCAGCCAGTCAGCAGACTCCCC...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTGCTTTGTAGATGTCTaGTTGGCCCTGGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVCFVDV*LALESV
Trigger: AACAGATTCCAGGGCCAACCAGACATCTACAAAGCA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATTGCTCAGTCAAAGCTaGAGTGTAGTTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLLLSQS*SVVSSS
Trigger: GCTGGAGGAAACTACACTCCAGCTTTGACTGAGCAA...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAAAGAGTCGAGCCACCTaGGCATACACCTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARKSRAT*AYTSCS
Trigger: TGAGCAAGAGGTGTATGCCCAGGTGGCTCGACTCTT...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATGCCTCTTCACATGGTaGATAATCAGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLCLFTW*IIRAAA
Trigger: TGCTGCTGCTCTGATTATCCACCATGTGAAGAGGCA...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTGTTTGCCTCTTCACATaGTGGATAATCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVVCLFT*WIIRAA
Trigger: TGCTGCTCTGATTATCCACCATGTGAAGAGGCAAAC...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTACGCCGCAAATTCCTTaGGAGAAATACTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVTPQIP*EKYWFL
Trigger: CAGAAACCAGTATTTCTCCCAAGGAATTTGCGGCGT...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTCTCTACATTTTCCATaGTCTTCTTGCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMSLHFP*SSCCFL
Trigger: AAGGAAACAGCAAGAAGACCATGGAAAATGTAGAGA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAAATCTTCCTGGTTTTTaGAGAGTCGAGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARNLPGF*RVEPPG
Trigger: CCCAGGTGGCTCGACTCTTCAAAAACCAGGAAGATT...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGATCCTCAGGCCATCGATaGTATCAGCTGCTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARSSGHR*YQLLCQ
Trigger: CTGACAAAGCAGCTGATATCATCGATGGCCTGAGGA...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGATTGTTGAAGCCTCTCTaGGCTTCTCGCCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARLLKPL*ASRHSS
Trigger: AGAAGAGTGGCGAGAAGCTCAGAGAGGCTTCAACAA...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTATTTGTCCTCTTTCTaGATGCCTGTTTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVYLSSF*MPVCLF
Trigger: GAAGAGGCAAACAGGCATTCAGAAAGAGGACAAATA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTATAGGAGTTCAGCTTaGACCTACACTCCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVYRSSA*TYTPAY
Trigger: ATAAGCTGGAGTGTAGGTTCAAGCTGAACTCCTATA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAATTGTGCTTCTTAGGTaGTCCTGTTGCTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLIVLLR*SCCFIH
Trigger: GTGGATGAAGCAACAGGAGCACCTAAGAAGCACAAT...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGTGATGAGTCTATGTTaGCATCAAGCAGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARVMSLC*HQAGSA
Trigger: TGCGGAGCCTGCTTGATGGCAACATAGACTCATCAC...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGTATGTGCTTGTAGTTaGGAAGGCTTGCTGACTTTG +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLVCACS*EGLLTL
Trigger: CAAAGTCAGCAAGCCTTCCCAACTACAAGCACATAC...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATTGTTTTGCAAAGATaGAGCTGTCCCCAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVIVLQR*SCPQGD
Trigger: ATCTCCTTGGGGACAGCTCCATCTTTGCAAAACAAT...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATGTCTGGTTGGCCCTaGAATCTGTTCTTGATCTTA +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVMSGWP*NLFLIL
Trigger: TAAGATCAAGAACAGATTCCAGGGCCAACCAGACAT...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATGCTTTGTAGATGTCTaGTTGGCCCTGGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLCFVDV*LALESV
Trigger: AACAGATTCCAGGGCCAACCAGACATCTACAAAGCA...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTTCCGCTGTTCTTTCTaGTATGTGTGCAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVFRCSF*YVCKIS
Trigger: GGAGATTTTGCACACATACCAGAAAGAACAGCGGAA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTCAGCATATATCCTCTaGAGTGCTTTTCGATGGATG +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVSAYIL*SAFRWM
Trigger: CATCCATCGAAAAGCACTCCAGAGGATATATGCTGA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATATTTGTCCTCTTTCTaGATGCCTGTTTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLYLSSF*MPVCLF
Trigger: GAAGAGGCAAACAGGCATTCAGAAAGAGGACAAATA...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTCTCAAGCAGAGAATTTaGTGCAGTCGCATAAAGATA +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVLKQRI*CSRIKI
Trigger: TATCTTTATGCGACTGCATCAAATTCTCTGCTTGAG...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATTCCGCTGTTCTTTCTaGTATGTGTGCAAAATCTCC +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLFRCSF*YVCKIS
Trigger: GGAGATTTTGCACACATACCAGAAAGAACAGCGGAA...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGACAACAAATCTTCCTaGTTTTTGAAGAGTCGAGCC +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLDNKSS*FLKSRA
Trigger: GGCTCGACTCTTCAAAAACCAGGAAGATTTGTTGTC...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACAACACCATGCTTGCTaGCATCTGCCATTGAAGACT +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARQHHAC*HLPLKT
Trigger: AGTCTTCAATGGCAGATGCCAGCAAGCATGGTGTTG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATCAGCATATATCCTCTaGAGTGCTTTTCGATGGATG +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLSAYIL*SAFRWM
Trigger: CATCCATCGAAAAGCACTCCAGAGGATATATGCTGA...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTGGAGTATCAATGCTCTaGGATTTAAATTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVGVSML*DLNSFM
Trigger: CATGAAGGAATTTAAATCTCAGAGCATTGATACTCC...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATCCCTCTTAACTTTTaGGCTGCTGTGTTACTAAAT +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVIPLNF*AAVLLN
Trigger: ATTTAGTAACACAGCAGCTCAAAAGTTAAGAGGGAT...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTCTTTCTGGTATGTGTaGAAAATCTCCAAGAATGCT +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVSFWYV*KISKNA
Trigger: AGCATTCTTGGAGATTTTGCACACATACCAGAAAGA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAATTGTGCTTCTTAGGTaGTCCTGTTGCTTCATCCAC +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARIVLLR*SCCFIH
Trigger: GTGGATGAAGCAACAGGAGCACCTAAGAAGCACAAT...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATTAATGCTCACAAAGTaGAGAGTCTCTGTATCACAG +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLLMLTK*RVSVSQ
Trigger: CTGTGATACAGAGACTCTGCACTTTGTGAGCATTAA...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTACATGTCCAGGAAAGCTaGGTAATAATCTTCTACATC +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLHVQES*VIIFYI
Trigger: GATGTAGAAGATTATTACCCAGCTTTCCTGGACATG...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTCTCTACATTTTCCATaGTCTTCTTGCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GTKSEATWYYGTQEARAVSLHFP*SSCCFL
Trigger: AAGGAAACAGCAAGAAGACCATGGAAAATGTAGAGA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAATCCCTCTTAACTTTTaGGCTGCTGTGTTACTAAAT +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLIPLNF*AAVLLN
Trigger: ATTTAGTAACACAGCAGCTCAAAAGTTAAGAGGGAT...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGATATAGGAGTTCAGCTTaGACCTACACTCCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARYRSSA*TYTPAY
Trigger: ATAAGCTGGAGTGTAGGTTCAAGCTGAACTCCTATA...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGACAACAAATCTTCCTaGTTTTTGAAGAGTCGAGCC +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARDNKSS*FLKSRA
Trigger: GGCTCGACTCTTCAAAAACCAGGAAGATTTGTTGTC...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGATTCACAGTGCCTCCATaGTCATTTCTCACAGAATCA +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARFTVPP*SFLTES
Trigger: TGATTCTGTGAGAAATGACCATGGAGGCACTGTGAA...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGATATCCAAGCGAAATTTaGCTTGTTCCTCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARYPSEI*LVPQQT
Trigger: TGTCTGCTGAGGAACAAGCCAAATTTCGCTTGGATA...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAAGGTCAGGAATGAAATaGTGCATGATTTGCTTGATT +
Preference number: 4 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLRSGMK*CMICLI
Trigger: AATCAAGCAAATCATGCACCATTTCATTCCTGACCT...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGATCTCAGCAGTTGTTTTaGTTAAAAGCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARSQQLF*LKALSC
Trigger: ACAGCTCAGTGCTTTTAAGCAAAACAACTGCTGAGA...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAATATATCCTCTGGAGTaGTTTTCGATGGATGACTTC +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARIYPLE*FSMDDF
Trigger: GAAGTCATCCATCGAAAAGCACTCCAGAGGATATAT...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACATGTCCAGGAAAGCTaGGTAATAATCTTCTACATC +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARHVQES*VIIFYI
Trigger: GATGTAGAAGATTATTACCCAGCTTTCCTGGACATG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR TCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGATGTAGTCCTCCGATTTaGTCACATATACCATCTTAT +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARCSPPI*SHIPSY
Trigger: ATAAGATGGTATATGTGATCAAATCGGAGGACTACA...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACAAAATCTCCAAGAATaGTTTGTAGATGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARQNLQE*FVDVWL
Trigger: CAACCAGACATCTACAAAGCATTCTTGGAGATTTTG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR GCA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAATCGATGATATCAGCTaGTTTGTCAGCATATATCCT +
Preference number: 4 (lower is better)
Translates to: FIGTKSEATWYYGTQEARIDDIS*FVSIYP
Trigger: AGGATATATGCTGACAAAGCAGCTGATATCATCGAT...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS GCA 90 bp GTCTTCCACCTTGAGCCTCTGAAACTGCTGCTGTCCCTGTACTGGTaGAACTGGTGGTGCTGGGTGGGCATGGCTCTGGACCACCTGGCC +
Preference number: 5 (lower is better)
Translates to: VFHLEPLKLLLSLYW*NWWCWVGMALDHLA
Trigger: GGCCAGGTGGTCCAGAGCCATGCCCACCCAGCACCACCAGTTGCACCAGTACAGGGACAGCAGCAGTTTCAGAGGCTCAAGGTGGAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 90 bp GGCATGGCTCTGGACCACCTGGCCTCCATGAGGCTGGACAGCTGTTaGGTGATGATGGCTGCTATGAACTGCTGCTATGGCGGGCCCATG +
Preference number: 5 (lower is better)
Translates to: GMALDHLASMRLDSC*VMMAAMNCCYGGPM
Trigger: CATGGGCCCGCCATAGCAGCAGTTCATAGCAGCCATCATCACCCAACAGCTGTCCAGCCTCATGGAGGCCAGGTGGTCCAGAGCCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 90 bp CTTGAGCCTCTGAAACTGCTGCTGTCCCTGTACTGGTGCAACTGGTaGTGCTGGGTGGGCATGGCTCTGGACCACCTGGCCTCCATGAGG +
Preference number: 5 (lower is better)
Translates to: LEPLKLLLSLYWCNW*CWVGMALDHLASMR
Trigger: CCTCATGGAGGCCAGGTGGTCCAGAGCCATGCCCACCCAGCACCACCAGTTGCACCAGTACAGGGACAGCAGCAGTTTCAGAGGCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 90 bp CACCTTGAGCCTCTGAAACTGCTGCTGTCCCTGTACTGGTGCAACTaGTGGTGCTGGGTGGGCATGGCTCTGGACCACCTGGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: HLEPLKLLLSLYWCN*WCWVGMALDHLASM
Trigger: CATGGAGGCCAGGTGGTCCAGAGCCATGCCCACCCAGCACCACCAGTTGCACCAGTACAGGGACAGCAGCAGTTTCAGAGGCTCAAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 90 bp GGCGTCTTCCACCTTGAGCCTCTGAAACTGCTGCTGTCCCTGTACTaGTGCAACTGGTGGTGCTGGGTGGGCATGGCTCTGGACCACCTG +
Preference number: 5 (lower is better)
Translates to: GVFHLEPLKLLLSLY*CNWWCWVGMALDHL
Trigger: CAGGTGGTCCAGAGCCATGCCCACCCAGCACCACCAGTTGCACCAGTACAGGGACAGCAGCAGTTTCAGAGGCTCAAGGTGGAAGACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS GCA 90 bp CAGGCCCTCGAGCCCCTCACCCATGAGCCATTTGCTGGTCTCTGCTaGCATTTCCCGAGGCACATGCTCCTTGGTCCATTTATCCACCCA +
Preference number: 5 (lower is better)
Translates to: QALEPLTHEPFAGLC*HFPRHMLLGPFIHP
Trigger: TGGGTGGATAAATGGACCAAGGAGCATGTGCCTCGGGAAATGGCAGCAGAGACCAGCAAATGGCTCATGGGTGAGGGGCTCGAGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS GCA 90 bp CCACCTGGCCTCCATGAGGCTGGACAGCTGTTGGGTGATGATGGCTaGTATGAACTGCTGCTATGGCGGGCCCATGACTGCCAGAACTTT +
Preference number: 5 (lower is better)
Translates to: PPGLHEAGQLLGDDG*YELLLWRAHDCQNF
Trigger: AAAGTTCTGGCAGTCATGGGCCCGCCATAGCAGCAGTTCATAGCAGCCATCATCACCCAACAGCTGTCCAGCCTCATGGAGGCCAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
ENSMUST00000169879.8
CDS GCA 90 bp TACCAGGCCCTCGAGCCCCTCACCCATGAGCCATTTGCTGGTCTCTaGTGCCATTTCCCGAGGCACATGCTCCTTGGTCCATTTATCCAC +
Preference number: 5 (lower is better)
Translates to: YQALEPLTHEPFAGL*CHFPRHMLLGPFIH
Trigger: GTGGATAAATGGACCAAGGAGCATGTGCCTCGGGAAATGGCAGCAGAGACCAGCAAATGGCTCATGGGTGAGGGGCTCGAGGGCCTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS TCA 90 bp GGTGGAGAACGTGGGGATGCATATGGTGGGAGTGGGGGAGTCTGCTaGCTGGCTGGAGTATGTGCTTGTAGTTGGGAAGGCTTGCTGACT +
Preference number: 5 (lower is better)
Translates to: GGERGDAYGGSGGVC*LAGVCACSWEGLLT
Trigger: AGTCAGCAAGCCTTCCCAACTACAAGCACATACTCCAGCCAGTCAGCAGACTCCCCCACTCCCACCATATGCATCCCCACGTTCTCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS TCA 90 bp GGTGTGGCTCCTGTTCCAGAGTGCCTGCGGATCTGGCAGCCATTCTaGCTGGGCCTCTGTGGCTTGTTATTCAGTTGGGGCTTCTTCACA +
Preference number: 5 (lower is better)
Translates to: GVAPVPECLRIWQPF*LGLCGLLFSWGFFT
Trigger: TGTGAAGAAGCCCCAACTGAATAACAAGCCACAGAGGCCCAGTCAGAATGGCTGCCAGATCCGCAGGCACTCTGGAACAGGAGCCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS GCA 90 bp TCCATGAGGCTGGACAGCTGTTGGGTGATGATGGCTGCTATGAACTaGTGCTATGGCGGGCCCATGACTGCCAGAACTTTGTGGCACAGC +
Preference number: 5 (lower is better)
Translates to: SMRLDSCWVMMAAMN*CYGGPMTARTLWHS
Trigger: GCTGTGCCACAAAGTTCTGGCAGTCATGGGCCCGCCATAGCAGCAGTTCATAGCAGCCATCATCACCCAACAGCTGTCCAGCCTCATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
ENSMUST00000169879.8
CDS CCA 90 bp TCCAGAGTGCCTGCGGATCTGGCAGCCATTCTGACTGGGCCTCTGTaGCTTGTTATTCAGTTGGGGCTTCTTCACAGTGCCTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: SRVPADLAAILTGPL*LVIQLGLLHSASMV
Trigger: GACCATGGAGGCACTGTGAAGAAGCCCCAACTGAATAACAAGCCACAGAGGCCCAGTCAGAATGGCTGCCAGATCCGCAGGCACTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 90 bp TGGCTCCTGTTCCAGAGTGCCTGCGGATCTGGCAGCCATTCTGACTaGGCCTCTGTGGCTTGTTATTCAGTTGGGGCTTCTTCACAGTGC +
Preference number: 5 (lower is better)
Translates to: WLLFQSACGSGSHSD*ASVACYSVGASSQC
Trigger: GCACTGTGAAGAAGCCCCAACTGAATAACAAGCCACAGAGGCCCAGTCAGAATGGCTGCCAGATCCGCAGGCACTCTGGAACAGGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS GCA 90 bp GGTGATGATGGCTGCTATGAACTGCTGCTATGGCGGGCCCATGACTaGCAGAACTTTGTGGCACAGCTGAAACCTGGTAGTTGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: GDDGCYELLLWRAHD*QNFVAQLKPGSWVP
Trigger: TGGCACCCAACTACCAGGTTTCAGCTGTGCCACAAAGTTCTGGCAGTCATGGGCCCGCCATAGCAGCAGTTCATAGCAGCCATCATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
ENSMUST00000169879.8
CDS CCA 90 bp GCTGGACAGCTGTTGGGTGATGATGGCTGCTATGAACTGCTGCTATaGCGGGCCCATGACTGCCAGAACTTTGTGGCACAGCTGAAACCT +
Preference number: 5 (lower is better)
Translates to: AGQLLGDDGCYELLL*RAHDCQNFVAQLKP
Trigger: AGGTTTCAGCTGTGCCACAAAGTTCTGGCAGTCATGGGCCCGCCATAGCAGCAGTTCATAGCAGCCATCATCACCCAACAGCTGTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
ENSMUST00000169879.8
CDS-3UTR CAA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGAGGCTGGACAGCTGTaGGGTGATGATGGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVEAGQL*GDDGCY
Trigger: ATAGCAGCCATCATCACCCAACAGCTGTCCAGCCTC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCTGCCCCCAACACCATaGTGCTTCTTAGGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFLPPTP*CFLGAP
Trigger: AGGAGCACCTAAGAAGCACAATGGTGTTGGGGGCAG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCGAGGCACATGCTCCTaGGTCCATTTATCCACCCAG +
Preference number: 5 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFRGTCS*VHLSTQ
Trigger: CTGGGTGGATAAATGGACCAAGGAGCATGTGCCTCG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGAGGCTGGACAGCTGTaGGGTGATGATGGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVEAGQL*GDDGCY
Trigger: ATAGCAGCCATCATCACCCAACAGCTGTCCAGCCTC...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGGAGGCTGGACAGCTGTaGGGTGATGATGGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVEAGQL*GDDGCY
Trigger: ATAGCAGCCATCATCACCCAACAGCTGTCCAGCCTC...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCCTGGGCATACACCTCTaGCTCAGTCAAAGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVLGIHL*LSQSWS
Trigger: ACTCCAGCTTTGACTGAGCAAGAGGTGTATGCCCAG...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCTGGGCATACACCTCTaGCTCAGTCAAAGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFLGIHL*LSQSWS
Trigger: ACTCCAGCTTTGACTGAGCAAGAGGTGTATGCCCAG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCTGGGCCTCTGTGGCTaGTTATTCAGTTGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVLGLCG*LFSWGF
Trigger: GAAGCCCCAACTGAATAACAAGCCACAGAGGCCCAG...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGCTGGGCCTCTGTGGCTaGTTATTCAGTTGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVLGLCG*LFSWGF
Trigger: GAAGCCCCAACTGAATAACAAGCCACAGAGGCCCAG...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCTGTGATGAGTCTATGTaGCCATCAAGCAGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVCDESM*PSSRLR
Trigger: GCGGAGCCTGCTTGATGGCAACATAGACTCATCACA...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTTGCTCTCGACCACGTaGACACTTCCGGATACGCCG +
Preference number: 5 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHLLSTT*TLPDTP
Trigger: CGGCGTATCCGGAAGTGTCAACGTGGTCGAGAGCAA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTTGCTCTCGACCACGTaGACACTTCCGGATACGCCG +
Preference number: 5 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDLLSTT*TLPDTP
Trigger: CGGCGTATCCGGAAGTGTCAACGTGGTCGAGAGCAA...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGCGAGGCACATGCTCCTaGGTCCATTTATCCACCCAG +
Preference number: 5 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVRGTCS*VHLSTQ
Trigger: CTGGGTGGATAAATGGACCAAGGAGCATGTGCCTCG...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCGAGGCACATGCTCCTaGGTCCATTTATCCACCCAG +
Preference number: 5 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVRGTCS*VHLSTQ
Trigger: CTGGGTGGATAAATGGACCAAGGAGCATGTGCCTCG...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAGAGGCTGGACAGCTGTaGGGTGATGATGGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQEAGQL*GDDGCY
Trigger: ATAGCAGCCATCATCACCCAACAGCTGTCCAGCCTC...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCGAACTTGGCCAGGTGTaGTCACGTTCACCATGTCAT +
Preference number: 5 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFELGQV*SRSPCH
Trigger: ATGACATGGTGAACGTGACAACACCTGGCCAAGTTC...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCGGGAATCTGATGAACTaGGCCAGGTGTTGTCACGTT +
Preference number: 5 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFGNLMN*ARCCHV
Trigger: AACGTGACAACACCTGGCCAAGTTCATCAGATTCCC...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATCTGTCCCCAAGGAGATaGTCACTGGTGTGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHLSPRR*SLVCEA
Trigger: AGCCTCACACACCAGTGACAATCTCCTTGGGGACAG...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATCTGGGCCTCTGTGGCTaGTTATTCAGTTGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDLGLCG*LFSWGF
Trigger: GAAGCCCCAACTGAATAACAAGCCACAGAGGCCCAG...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCGTTCCAACACCATGCTaGCTGGCATCTGCCATTGAA +
Preference number: 5 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFVPTPC*LASAIE
Trigger: TTCAATGGCAGATGCCAGCAAGCATGGTGTTGGAAC...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCGTTCCAACACCATGCTaGCTGGCATCTGCCATTGAA +
Preference number: 5 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVVPTPC*LASAIE
Trigger: TTCAATGGCAGATGCCAGCAAGCATGGTGTTGGAAC...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCTTCTGTAGCCTGCTCTaGCCTCTCGTCATAGATGCT +
Preference number: 5 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVFCSLL*PLVIDA
Trigger: AGCATCTATGACGAGAGGCAAGAGCAGGCTACAGAA...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCTTCTGTAGCCTGCTCTaGCCTCTCGTCATAGATGCT +
Preference number: 5 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFFCSLL*PLVIDA
Trigger: AGCATCTATGACGAGAGGCAAGAGCAGGCTACAGAA...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAACTGCCCCCAACACCATaGTGCTTCTTAGGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQLPPTP*CFLGAP
Trigger: AGGAGCACCTAAGAAGCACAATGGTGTTGGGGGCAG...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGTGTGATGAGTCTATGTaGCCATCAAGCAGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVCDESM*PSSRLR
Trigger: GCGGAGCCTGCTTGATGGCAACATAGACTCATCACA...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCCCTTCTTTTTCCTGTaGCTCTCGACCACGTTGACA +
Preference number: 5 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFPFFFL*LSTTLT
Trigger: TGTCAACGTGGTCGAGAGCAACAGGAAAAAGAAGGG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATCGAGGCACATGCTCCTaGGTCCATTTATCCACCCAG +
Preference number: 5 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDRGTCS*VHLSTQ
Trigger: CTGGGTGGATAAATGGACCAAGGAGCATGTGCCTCG...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATCGAGGCACATGCTCCTaGGTCCATTTATCCACCCAG +
Preference number: 5 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHRGTCS*VHLSTQ
Trigger: CTGGGTGGATAAATGGACCAAGGAGCATGTGCCTCG...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 90 bp GAAGAGTCGAGCCACCTGGGCATACACCTCTTGCTCAGTCAAAGCTaGAGTGTAGTTTCCTCCAGCTTCCTTGGCATTCCGCTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: EESSHLGIHLLLSQS*SVVSSSFLGIPLFF
Trigger: AAAGAACAGCGGAATGCCAAGGAAGCTGGAGGAAACTACACTCCAGCTTTGACTGAGCAAGAGGTGTATGCCCAGGTGGCTCGACTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGGAATCTGATGAACTaGGCCAGGTGTTGTCACGTT +
Preference number: 5 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVGNLMN*ARCCHV
Trigger: AACGTGACAACACCTGGCCAAGTTCATCAGATTCCC...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGTTTCCTCCAGCTTCCTaGGCATTCCGCTGTTCTTTC +
Preference number: 5 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVFPPAS*AFRCSF
Trigger: GAAAGAACAGCGGAATGCCAAGGAAGCTGGAGGAAA...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCAAATCTTCCTGGTTTTaGAAGAGTCGAGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVKSSWF*KSRATW
Trigger: CCAGGTGGCTCGACTCTTCAAAAACCAGGAAGATTT...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGGTTCCAACACCATGCTaGCTGGCATCTGCCATTGAA +
Preference number: 5 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVVPTPC*LASAIE
Trigger: TTCAATGGCAGATGCCAGCAAGCATGGTGTTGGAAC...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGCAGGACTATCACTCTaGTCTCGCTTTATGCCTAGC +
Preference number: 5 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVAGLSL*SRFMPS
Trigger: GCTAGGCATAAAGCGAGACAAGAGTGATAGTCCTGC...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTGTGATGAGTCTATGTaGCCATCAAGCAGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHCDESM*PSSRLR
Trigger: GCGGAGCCTGCTTGATGGCAACATAGACTCATCACA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTTGCTCTCGACCACGTaGACACTTCCGGATACGCCG +
Preference number: 5 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMLLSTT*TLPDTP
Trigger: CGGCGTATCCGGAAGTGTCAACGTGGTCGAGAGCAA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGCCCTTCTTTTTCCTGTaGCTCTCGACCACGTTGACA +
Preference number: 5 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVPFFFL*LSTTLT
Trigger: TGTCAACGTGGTCGAGAGCAACAGGAAAAAGAAGGG...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCCTTCTTTTTCCTGTaGCTCTCGACCACGTTGACA +
Preference number: 5 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVPFFFL*LSTTLT
Trigger: TGTCAACGTGGTCGAGAGCAACAGGAAAAAGAAGGG...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATGGGAATCTGATGAACTaGGCCAGGTGTTGTCACGTT +
Preference number: 5 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHGNLMN*ARCCHV
Trigger: AACGTGACAACACCTGGCCAAGTTCATCAGATTCCC...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTTTCCTCCAGCTTCCTaGGCATTCCGCTGTTCTTTC +
Preference number: 5 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHFPPAS*AFRCSF
Trigger: GAAAGAACAGCGGAATGCCAAGGAAGCTGGAGGAAA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAAAAAGCACTGAGCTGTaGGCATCTGGCAGGAACTGT +
Preference number: 5 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQKSTEL*ASGRNC
Trigger: ACAGTTCCTGCCAGATGCCAACAGCTCAGTGCTTTT...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGCTGGGCCTCTGTGGCTaGTTATTCAGTTGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMLGLCG*LFSWGF
Trigger: GAAGCCCCAACTGAATAACAAGCCACAGAGGCCCAG...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCGGATTGTTGCAAGATaGGTCTCAAGAACCACATCA +
Preference number: 5 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFRIVAR*VSRTTS
Trigger: TGATGTGGTTCTTGAGACCAATCTTGCAACAATCCG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCTTATCCAAGCGAAATTaGGCTTGTTCCTCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVLSKRN*ACSSAD
Trigger: GTCTGCTGAGGAACAAGCCAAATTTCGCTTGGATAA...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCTTATCCAAGCGAAATTaGGCTTGTTCCTCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFLSKRN*ACSSAD
Trigger: GTCTGCTGAGGAACAAGCCAAATTTCGCTTGGATAA...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTTCTGTAGCCTGCTCTaGCCTCTCGTCATAGATGCT +
Preference number: 5 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHFCSLL*PLVIDA
Trigger: AGCATCTATGACGAGAGGCAAGAGCAGGCTACAGAA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAATTCTGTAGCCTGCTCTaGCCTCTCGTCATAGATGCT +
Preference number: 5 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQFCSLL*PLVIDA
Trigger: AGCATCTATGACGAGAGGCAAGAGCAGGCTACAGAA...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTTCTGTAGCCTGCTCTaGCCTCTCGTCATAGATGCT +
Preference number: 5 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDFCSLL*PLVIDA
Trigger: AGCATCTATGACGAGAGGCAAGAGCAGGCTACAGAA...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCTTTCTGAATGCCTGTTaGCCTCTTCACATGGTGGAT +
Preference number: 5 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFFLNAC*PLHMVD
Trigger: ATCCACCATGTGAAGAGGCAAACAGGCATTCAGAAA...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATGCAGGACTATCACTCTaGTCTCGCTTTATGCCTAGC +
Preference number: 5 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHAGLSL*SRFMPS
Trigger: GCTAGGCATAAAGCGAGACAAGAGTGATAGTCCTGC...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS GCA 90 bp GACTGGGCCTCTGTGGCTTGTTATTCAGTTGGGGCTTCTTCACAGTaGCTCCATGGTCATTTCTCACAGAATCAACCTTCTCAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: DWASVACYSVGASSQ*LHGHFSQNQPSQQL
Trigger: CAACTGCTGAGAAGGTTGATTCTGTGAGAAATGACCATGGAGGCACTGTGAAGAAGCCCCAACTGAATAACAAGCCACAGAGGCCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGTTTGTAGATGTCTGGTaGGCCCTGGAATCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVFVDVW*ALESVL
Trigger: AAGAACAGATTCCAGGGCCAACCAGACATCTACAAA...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGCTGGGCATACACCTCTaGCTCAGTCAAAGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMLGIHL*LSQSWS
Trigger: ACTCCAGCTTTGACTGAGCAAGAGGTGTATGCCCAG...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATAAATCTTCCTGGTTTTaGAAGAGTCGAGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHKSSWF*KSRATW
Trigger: CCAGGTGGCTCGACTCTTCAAAAACCAGGAAGATTT...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCGGATTGTTGCAAGATaGGTCTCAAGAACCACATCA +
Preference number: 5 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVRIVAR*VSRTTS
Trigger: TGATGTGGTTCTTGAGACCAATCTTGCAACAATCCG...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCCTAAAACCCGGATTGTaGCAAGATTGGTCTCAAGAA +
Preference number: 5 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVLKPGL*QDWSQE
Trigger: TTCTTGAGACCAATCTTGCAACAATCCGGGTTTTAG...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCCAGTTCCAGCTTCCTTCTAAAACCCGGATaGTTGCAAGATTGGTCTCAA +
Preference number: 5 (lower is better)
Translates to: HSLLGLGSTRGKSASSSFLLKPG*LQDWSQ
Trigger: TTGAGACCAATCTTGCAACAATCCGGGTTTTAGAAG...GAAGCTGGAACTGGCACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGTTATCCAAGCGAAATTaGGCTTGTTCCTCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVLSKRN*ACSSAD
Trigger: GTCTGCTGAGGAACAAGCCAAATTTCGCTTGGATAA...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGCTTGAAGTTGATGCCTaGGTGATCCAGAGACTTCAA +
Preference number: 5 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVLEVDA*VIQRLQ
Trigger: TTGAAGTCTCTGGATCACCAAGGCATCAACTTCAAG...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTTTCTGAATGCCTGTTaGCCTCTTCACATGGTGGAT +
Preference number: 5 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVFLNAC*PLHMVD
Trigger: ATCCACCATGTGAAGAGGCAAACAGGCATTCAGAAA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGACATCCATAGGTTCCTaGAGACGTAGTTGTATGGCA +
Preference number: 5 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVTSIGS*RRSCMA
Trigger: TGCCATACAACTACGTCTCAAGGAACCTATGGATGT...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTGTGATGAGTCTATGTaGCCATCAAGCAGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMCDESM*PSSRLR
Trigger: GCGGAGCCTGCTTGATGGCAACATAGACTCATCACA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGTACGCCGCAAATTCCTaGGGAGAAATACTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVYAANS*GEILVS
Trigger: AGAAACCAGTATTTCTCCCAAGGAATTTGCGGCGTA...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTACGCCGCAAATTCCTaGGGAGAAATACTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVYAANS*GEILVS
Trigger: AGAAACCAGTATTTCTCCCAAGGAATTTGCGGCGTA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS TCA 90 bp CAGCTGCTTTGTCAGCATATATCCTCTGGAGTGCTTTTCGATGGATaGCTTCGGACGTGCCTCCAAGGGTGTTATCCAAGCGAAATTTGG +
Preference number: 5 (lower is better)
Translates to: QLLCQHISSGVLFDG*LRTCLQGCYPSEIW
Trigger: CCAAATTTCGCTTGGATAACACCCTTGGAGGCACGTCCGAAGTCATCCATCGAAAAGCACTCCAGAGGATATATGCTGACAAAGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS TCA 90 bp GGACAATCGGAACAGCAATGGAGGGGTTCTTCCTCAGGCCATCGATaGTATCAGCTGCTTTGTCAGCATATATCCTCTGGAGTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: GQSEQQWRGSSSGHR*YQLLCQHISSGVLF
Trigger: GAAAAGCACTCCAGAGGATATATGCTGACAAAGCAGCTGATATCATCGATGGCCTGAGGAAGAACCCCTCCATTGCTGTTCCGATTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS GCA 90 bp GCCATCGATGATATCAGCTGCTTTGTCAGCATATATCCTCTGGAGTaGTTTTCGATGGATGACTTCGGACGTGCCTCCAAGGGTGTTATC +
Preference number: 5 (lower is better)
Translates to: AIDDISCFVSIYPLE*FSMDDFGRASKGVI
Trigger: GATAACACCCTTGGAGGCACGTCCGAAGTCATCCATCGAAAAGCACTCCAGAGGATATATGCTGACAAAGCAGCTGATATCATCGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 90 bp GTTGATGGCATGATTAAACTCCACAGGCTGATTGTTTTGCAAAGATaGAGCTGTCCCCAAGGAGATTGTCACTGGTGTGTGAGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: VDGMIKLHRLIVLQR*SCPQGDCHWCVRLD
Trigger: GTCCAGCCTCACACACCAGTGACAATCTCCTTGGGGACAGCTCCATCTTTGCAAAACAATCAGCCTGTGGAGTTTAATCATGCCATCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGAAAAGCACTGAGCTGTaGGCATCTGGCAGGAACTGT +
Preference number: 5 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMKSTEL*ASGRNC
Trigger: ACAGTTCCTGCCAGATGCCAACAGCTCAGTGCTTTT...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGTTCTCAGCAGTTGTTTaGCTTAAAAGCACTGAGCTG +
Preference number: 5 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVFSAVV*LKSTEL
Trigger: CAGCTCAGTGCTTTTAAGCAAAACAACTGCTGAGAA...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATCGGATTGTTGCAAGATaGGTCTCAAGAACCACATCA +
Preference number: 5 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHRIVAR*VSRTTS
Trigger: TGATGTGGTTCTTGAGACCAATCTTGCAACAATCCG...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGCTAAAACCCGGATTGTaGCAAGATTGGTCTCAAGAA +
Preference number: 5 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVLKPGL*QDWSQE
Trigger: TTCTTGAGACCAATCTTGCAACAATCCGGGTTTTAG...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGGGAAAAGTGCTTCTAAAACCCGGATaGTTGCAAGATTGGTCTCAA +
Preference number: 5 (lower is better)
Translates to: ACMDFIPCWVWVVPVGKVLLKPG*LQDWSQ
Trigger: TTGAGACCAATCTTGCAACAATCCGGGTTTTAGAAG...CACTTTTCCCACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGCAAGCGAAATTTGGCTaGTTCCTCAGCAGACAAGCG +
Preference number: 5 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMQAKFG*FLSRQA
Trigger: CGCTTGTCTGCTGAGGAACAAGCCAAATTTCGCTTG...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTTATCCAAGCGAAATTaGGCTTGTTCCTCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDLSKRN*ACSSAD
Trigger: GTCTGCTGAGGAACAAGCCAAATTTCGCTTGGATAA...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATCTTGAAGTTGATGCCTaGGTGATCCAGAGACTTCAA +
Preference number: 5 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDLEVDA*VIQRLQ
Trigger: TTGAAGTCTCTGGATCACCAAGGCATCAACTTCAAG...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTTTCTGAATGCCTGTTaGCCTCTTCACATGGTGGAT +
Preference number: 5 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHFLNAC*PLHMVD
Trigger: ATCCACCATGTGAAGAGGCAAACAGGCATTCAGAAA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAATTTCTGAATGCCTGTTaGCCTCTTCACATGGTGGAT +
Preference number: 5 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQFLNAC*PLHMVD
Trigger: ATCCACCATGTGAAGAGGCAAACAGGCATTCAGAAA...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTCTCTGTGCTTGCATGGACTTCATTCCCTGTTGGGTCTGGGTAGTACCCGTGCCTCAAGCAGAGAATTaGATGCAGTCGCATAAAGAT +
Preference number: 5 (lower is better)
Translates to: CLCACMDFIPCWVWVVPVPQAEN*MQSHKD
Trigger: ATCTTTATGCGACTGCATCAAATTCTCTGCTTGAGG...CACGGGTACTACCCAGACCCAACAGGGAATGAAGTCCATGCAAGCACAGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGGCAGGACTATCACTCTaGTCTCGCTTTATGCCTAGC +
Preference number: 5 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMAGLSL*SRFMPS
Trigger: GCTAGGCATAAAGCGAGACAAGAGTGATAGTCCTGC...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATACATCCATAGGTTCCTaGAGACGTAGTTGTATGGCA +
Preference number: 5 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDTSIGS*RRSCMA
Trigger: TGCCATACAACTACGTCTCAAGGAACCTATGGATGT...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATACATCCATAGGTTCCTaGAGACGTAGTTGTATGGCA +
Preference number: 5 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHTSIGS*RRSCMA
Trigger: TGCCATACAACTACGTCTCAAGGAACCTATGGATGT...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAAACATCCATAGGTTCCTaGAGACGTAGTTGTATGGCA +
Preference number: 5 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQTSIGS*RRSCMA
Trigger: TGCCATACAACTACGTCTCAAGGAACCTATGGATGT...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GCACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCAACAGTCAGCTGAACTaGACCTTGACTTTGAATGAA +
Preference number: 5 (lower is better)
Translates to: APPSIHPSKWGQHLVAQVNSQLN*TLTLNE
Trigger: TTCATTCAAAGTCAAGGTCAAGTTCAGCTGACTGTT...GACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTACGCCGCAAATTCCTaGGGAGAAATACTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHYAANS*GEILVS
Trigger: AGAAACCAGTATTTCTCCCAAGGAATTTGCGGCGTA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS GCA 90 bp AACAGCAATGGAGGGGTTCTTCCTCAGGCCATCGATGATATCAGCTaGTTTGTCAGCATATATCCTCTGGAGTGCTTTTCGATGGATGAC +
Preference number: 5 (lower is better)
Translates to: NSNGGVLPQAIDDIS*FVSIYPLECFSMDD
Trigger: GTCATCCATCGAAAAGCACTCCAGAGGATATATGCTGACAAAGCAGCTGATATCATCGATGGCCTGAGGAAGAACCCCTCCATTGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 90 bp CCTCTTGCTCAGTCAAAGCTGGAGTGTAGTTTCCTCCAGCTTCCTTaGCATTCCGCTGTTCTTTCTGGTATGTGTGCAAAATCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: PLAQSKLECSFLQLP*HSAVLSGMCAKSPR
Trigger: TCTTGGAGATTTTGCACACATACCAGAAAGAACAGCGGAATGCCAAGGAAGCTGGAGGAAACTACACTCCAGCTTTGACTGAGCAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGAAATCTTCCTGGTTTTaGAAGAGTCGAGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMKSSWF*KSRATW
Trigger: CCAGGTGGCTCGACTCTTCAAAAACCAGGAAGATTT...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATTTCTCAGCAGTTGTTTaGCTTAAAAGCACTGAGCTG +
Preference number: 5 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHFSAVV*LKSTEL
Trigger: CAGCTCAGTGCTTTTAAGCAAAACAACTGCTGAGAA...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GAGGTGGGAAAAGGAGCAGTGACAAGATGCACCTCCATCCATCCATCCATCCAATTCTCAGCAGTTGTTTaGCTTAAAAGCACTGAGCTG +
Preference number: 5 (lower is better)
Translates to: EVGKGAVTRCTSIHPSIQFSAVV*LKSTEL
Trigger: CAGCTCAGTGCTTTTAAGCAAAACAACTGCTGAGAA...TTGGATGGATGGATGGATGGAGGTGCATCTTGTCACTGCTCCTTTTCCCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATCTAAAACCCGGATTGTaGCAAGATTGGTCTCAAGAA +
Preference number: 5 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDLKPGL*QDWSQE
Trigger: TTCTTGAGACCAATCTTGCAACAATCCGGGTTTTAG...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTCTGCCCCCAACACCATaGTGCTTCTTAGGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: GTKSEATWYYGTQEARAVLPPTP*CFLGAP
Trigger: AGGAGCACCTAAGAAGCACAATGGTGTTGGGGGCAG...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATCCTCAAGCAGAGAATTaGATGCAGTCGCATAAAGAT +
Preference number: 5 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDPQAEN*MQSHKD
Trigger: ATCTTTATGCGACTGCATCAAATTCTCTGCTTGAGG...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATGTTTTCTTCTTCAATTaGCCGTTCAGCTTGGGAACA +
Preference number: 5 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDVFFFN*PFSLGT
Trigger: TGTTCCCAAGCTGAACGGCAAATTGAAGAAGAAAAC...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 90 bp ATATCAGCTGCTTTGTCAGCATATATCCTCTGGAGTGCTTTTCGATaGATGACTTCGGACGTGCCTCCAAGGGTGTTATCCAAGCGAAAT +
Preference number: 5 (lower is better)
Translates to: ISAALSAYILWSAFR*MTSDVPPRVLSKRN
Trigger: ATTTCGCTTGGATAACACCCTTGGAGGCACGTCCGAAGTCATCCATCGAAAAGCACTCCAGAGGATATATGCTGACAAAGCAGCTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTACTGTCCCCAAGGAGATaGTCACTGGTGTGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLLSPRR*SLVCEA
Trigger: AGCCTCACACACCAGTGACAATCTCCTTGGGGACAG...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTTTGTAGATGTCTGGTaGGCCCTGGAATCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMFVDVW*ALESVL
Trigger: AAGAACAGATTCCAGGGCCAACCAGACATCTACAAA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTCTGGGCATACACCTCTaGCTCAGTCAAAGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: GTKSEATWYYGTQEARAVLGIHL*LSQSWS
Trigger: ACTCCAGCTTTGACTGAGCAAGAGGTGTATGCCCAG...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTACTGGGCCTCTGTGGCTaGTTATTCAGTTGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLLGLCG*LFSWGF
Trigger: GAAGCCCCAACTGAATAACAAGCCACAGAGGCCCAG...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGTTATCCAAGCGAAATTaGGCTTGTTCCTCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMLSKRN*ACSSAD
Trigger: GTCTGCTGAGGAACAAGCCAAATTTCGCTTGGATAA...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGCTTGAAGTTGATGCCTaGGTGATCCAGAGACTTCAA +
Preference number: 5 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMLEVDA*VIQRLQ
Trigger: TTGAAGTCTCTGGATCACCAAGGCATCAACTTCAAG...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATAACAGTCAGCTGAACTaGACCTTGACTTTGAATGAA +
Preference number: 5 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHNSQLN*TLTLNE
Trigger: TTCATTCAAAGTCAAGGTCAAGTTCAGCTGACTGTT...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTGGGAATCTGATGAACTaGGCCAGGTGTTGTCACGTT +
Preference number: 5 (lower is better)
Translates to: GTKSEATWYYGTQEARAVGNLMN*ARCCHV
Trigger: AACGTGACAACACCTGGCCAAGTTCATCAGATTCCC...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAAAAGCACTGAGCTGTaGGCATCTGGCAGGAACTGT +
Preference number: 5 (lower is better)
Translates to: GTKSEATWYYGTQEARAVKSTEL*ASGRNC
Trigger: ACAGTTCCTGCCAGATGCCAACAGCTCAGTGCTTTT...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGCTTCTAAAACCCGGATaGTTGCAAGATTGGTCTCAA +
Preference number: 5 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMLLKPG*LQDWSQ
Trigger: TTGAGACCAATCTTGCAACAATCCGGGTTTTAGAAG...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTCAAGCGAAATTTGGCTaGTTCCTCAGCAGACAAGCG +
Preference number: 5 (lower is better)
Translates to: GTKSEATWYYGTQEARAVQAKFG*FLSRQA
Trigger: CGCTTGTCTGCTGAGGAACAAGCCAAATTTCGCTTG...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGGTTTTCTTCTTCAATTaGCCGTTCAGCTTGGGAACA +
Preference number: 5 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMVFFFN*PFSLGT
Trigger: TGTTCCCAAGCTGAACGGCAAATTGAAGAAGAAAAC...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TGTATCCTGCTGGTGCCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATATGCTCTGGATTAATTaGTCCATAGTAAAGGCAATG +
Preference number: 5 (lower is better)
Translates to: CILLVPGCTGGLKGIFLDMLWIN*SIVKAM
Trigger: CATTGCCTTTACTATGGACAAATTAATCCAGAGCAT...ATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGGCACCAGCAGGATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp ACCTCCATCCATCCATCCATCCAAATGGGGACAGCATCTGGTTGCTCAGGTCATATGCTCTGGATTAATTaGTCCATAGTAAAGGCAATG +
Preference number: 5 (lower is better)
Translates to: TSIHPSIQMGTASGCSGHMLWIN*SIVKAM
Trigger: CATTGCCTTTACTATGGACAAATTAATCCAGAGCAT...ATGACCTGAGCAACCAGATGCTGTCCCCATTTGGATGGATGGATGGATGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGATTGCTCTCGACCACGTaGACACTTCCGGATACGCCG +
Preference number: 5 (lower is better)
Translates to: FIGTKSEATWYYGTQEARLLSTT*TLPDTP
Trigger: CGGCGTATCCGGAAGTGTCAACGTGGTCGAGAGCAA...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS GCA 90 bp GGCATTCCGCTGTTCTTTCTGGTATGTGTGCAAAATCTCCAAGAATaGTTTGTAGATGTCTGGTTGGCCCTGGAATCTGTTCTTGATCTT +
Preference number: 5 (lower is better)
Translates to: GIPLFFLVCVQNLQE*FVDVWLALESVLDL
Trigger: AAGATCAAGAACAGATTCCAGGGCCAACCAGACATCTACAAAGCATTCTTGGAGATTTTGCACACATACCAGAAAGAACAGCGGAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 90 bp GGCATAGTCTATCTCCATGGCAATGCCTTCTGTAGCTCGTTCCTTTaGAAAGCTTTCCAGATGTACAGACTCCTTATAGCCCAAAAAGTT +
Preference number: 5 (lower is better)
Translates to: GIVYLHGNAFCSSFL*KAFQMYRLLIAQKV
Trigger: AACTTTTTGGGCTATAAGGAGTCTGTACATCTGGAAAGCTTTCCAAAGGAACGAGCTACAGAAGGCATTGCCATGGAGATAGACTATGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGGGAATCTGATGAACTaGGCCAGGTGTTGTCACGTT +
Preference number: 5 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLGNLMN*ARCCHV
Trigger: AACGTGACAACACCTGGCCAAGTTCATCAGATTCCC...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACTGTCCCCAAGGAGATaGTCACTGGTGTGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: FIGTKSEATWYYGTQEARLSPRR*SLVCEA
Trigger: AGCCTCACACACCAGTGACAATCTCCTTGGGGACAG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATTTCCTCCAGCTTCCTaGGCATTCCGCTGTTCTTTC +
Preference number: 5 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLFPPAS*AFRCSF
Trigger: GAAAGAACAGCGGAATGCCAAGGAAGCTGGAGGAAA...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGTTCCAACACCATGCTaGCTGGCATCTGCCATTGAA +
Preference number: 5 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLVPTPC*LASAIE
Trigger: TTCAATGGCAGATGCCAGCAAGCATGGTGTTGGAAC...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTACAAGCGAAATTTGGCTaGTTCCTCAGCAGACAAGCG +
Preference number: 5 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLQAKFG*FLSRQA
Trigger: CGCTTGTCTGCTGAGGAACAAGCCAAATTTCGCTTG...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACTGCCCCCAACACCATaGTGCTTCTTAGGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: FIGTKSEATWYYGTQEARLPPTP*CFLGAP
Trigger: AGGAGCACCTAAGAAGCACAATGGTGTTGGGGGCAG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAGCAGGACTATCACTCTaGTCTCGCTTTATGCCTAGC +
Preference number: 5 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLAGLSL*SRFMPS
Trigger: GCTAGGCATAAAGCGAGACAAGAGTGATAGTCCTGC...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp CCTGGTTGCACTGGTGGCTTGAAAGGCATCTTCCTTGATTCTTCAGTGTACATGAACAGTCAGCTGAACTaGACCTTGACTTTGAATGAA +
Preference number: 5 (lower is better)
Translates to: PGCTGGLKGIFLDSSVYMNSQLN*TLTLNE
Trigger: TTCATTCAAAGTCAAGGTCAAGTTCAGCTGACTGTT...CATGTACACTGAAGAATCAAGGAAGATGCCTTTCAAGCCACCAGTGCAACCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTACCCTTCTTTTTCCTGTaGCTCTCGACCACGTTGACA +
Preference number: 5 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLPFFFL*LSTTLT
Trigger: TGTCAACGTGGTCGAGAGCAACAGGAAAAAGAAGGG...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTTTTGTAGATGTCTGGTaGGCCCTGGAATCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: GTKSEATWYYGTQEARAVFVDVW*ALESVL
Trigger: AAGAACAGATTCCAGGGCCAACCAGACATCTACAAA...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTAAAATCTTCCTGGTTTTaGAAGAGTCGAGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLKSSWF*KSRATW
Trigger: CCAGGTGGCTCGACTCTTCAAAAACCAGGAAGATTT...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTCTTGAAGTTGATGCCTaGGTGATCCAGAGACTTCAA +
Preference number: 5 (lower is better)
Translates to: GTKSEATWYYGTQEARAVLEVDA*VIQRLQ
Trigger: TTGAAGTCTCTGGATCACCAAGGCATCAACTTCAAG...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGATGTGATGAGTCTATGTaGCCATCAAGCAGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: FIGTKSEATWYYGTQEARCDESM*PSSRLR
Trigger: GCGGAGCCTGCTTGATGGCAACATAGACTCATCACA...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTATTTGTAGATGTCTGGTaGGCCCTGGAATCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLFVDVW*ALESVL
Trigger: AAGAACAGATTCCAGGGCCAACCAGACATCTACAAA...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGATTTCCTCCAGCTTCCTaGGCATTCCGCTGTTCTTTC +
Preference number: 5 (lower is better)
Translates to: FIGTKSEATWYYGTQEARFPPAS*AFRCSF
Trigger: GAAAGAACAGCGGAATGCCAAGGAAGCTGGAGGAAA...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTACGGATTGTTGCAAGATaGGTCTCAAGAACCACATCA +
Preference number: 5 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLRIVAR*VSRTTS
Trigger: TGATGTGGTTCTTGAGACCAATCTTGCAACAATCCG...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTCTTCTAAAACCCGGATaGTTGCAAGATTGGTCTCAA +
Preference number: 5 (lower is better)
Translates to: GTKSEATWYYGTQEARAVLLKPG*LQDWSQ
Trigger: TTGAGACCAATCTTGCAACAATCCGGGTTTTAGAAG...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACAAGCGAAATTTGGCTaGTTCCTCAGCAGACAAGCG +
Preference number: 5 (lower is better)
Translates to: FIGTKSEATWYYGTQEARQAKFG*FLSRQA
Trigger: CGCTTGTCTGCTGAGGAACAAGCCAAATTTCGCTTG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTGTTTTCTTCTTCAATTaGCCGTTCAGCTTGGGAACA +
Preference number: 5 (lower is better)
Translates to: GTKSEATWYYGTQEARAVVFFFN*PFSLGT
Trigger: TGTTCCCAAGCTGAACGGCAAATTGAAGAAGAAAAC...AACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACCCTTCTTTTTCCTGTaGCTCTCGACCACGTTGACA +
Preference number: 5 (lower is better)
Translates to: FIGTKSEATWYYGTQEARPFFFL*LSTTLT
Trigger: TGTCAACGTGGTCGAGAGCAACAGGAAAAAGAAGGG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp GTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGCAGTTACCTCAAGCAGAGAATTaGATGCAGTCGCATAAAGAT +
Preference number: 5 (lower is better)
Translates to: VLNLKPHGTMVHKKLEQLPQAEN*MQSHKD
Trigger: ATCTTTATGCGACTGCATCAAATTCTCTGCTTGAGG...TAACTGCTCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGATTTGTAGATGTCTGGTaGGCCCTGGAATCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: FIGTKSEATWYYGTQEARFVDVW*ALESVL
Trigger: AAGAACAGATTCCAGGGCCAACCAGACATCTACAAA...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACGGATTGTTGCAAGATaGGTCTCAAGAACCACATCA +
Preference number: 5 (lower is better)
Translates to: FIGTKSEATWYYGTQEARRIVAR*VSRTTS
Trigger: TGATGTGGTTCTTGAGACCAATCTTGCAACAATCCG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAACATCCATAGGTTCCTaGAGACGTAGTTGTATGGCA +
Preference number: 5 (lower is better)
Translates to: FIGTKSEATWYYGTQEARTSIGS*RRSCMA
Trigger: TGCCATACAACTACGTCTCAAGGAACCTATGGATGT...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGATACGCCGCAAATTCCTaGGGAGAAATACTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: FIGTKSEATWYYGTQEARYAANS*GEILVS
Trigger: AGAAACCAGTATTTCTCCCAAGGAATTTGCGGCGTA...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACTAAAACCCGGATTGTaGCAAGATTGGTCTCAAGAA +
Preference number: 5 (lower is better)
Translates to: FIGTKSEATWYYGTQEARLKPGL*QDWSQE
Trigger: TTCTTGAGACCAATCTTGCAACAATCCGGGTTTTAG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGACTTCTAAAACCCGGATaGTTGCAAGATTGGTCTCAA +
Preference number: 5 (lower is better)
Translates to: FIGTKSEATWYYGTQEARLLKPG*LQDWSQ
Trigger: TTGAGACCAATCTTGCAACAATCCGGGTTTTAGAAG...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAGTTTTCTTCTTCAATTaGCCGTTCAGCTTGGGAACA +
Preference number: 5 (lower is better)
Translates to: FIGTKSEATWYYGTQEARVFFFN*PFSLGT
Trigger: TGTTCCCAAGCTGAACGGCAAATTGAAGAAGAAAAC...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 90 bp TTTCTGGTATGTGTGCAAAATCTCCAAGAATGCTTTGTAGATGTCTaGTTGGCCCTGGAATCTGTTCTTGATCTTATTAACATAGTTGAT +
Preference number: 5 (lower is better)
Translates to: FLVCVQNLQECFVDV*LALESVLDLINIVD
Trigger: ATCAACTATGTTAATAAGATCAAGAACAGATTCCAGGGCCAACCAGACATCTACAAAGCATTCTTGGAGATTTTGCACACATACCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS-3UTR CAA 90 bp TTTATAGGTACTAAATCTGAAGCCACATGGTACTATGGTACACAAGAAGCTAGAATGCTCTGGATTAATTaGTCCATAGTAAAGGCAATG +
Preference number: 5 (lower is better)
Translates to: FIGTKSEATWYYGTQEARMLWIN*SIVKAM
Trigger: CATTGCCTTTACTATGGACAAATTAATCCAGAGCAT...TCTAGCTTCTTGTGTACCATAGTACCATGTGGCTTCAGATTTAGTACCTATAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp CTGAAACTGCTGCTGTCCCTGTACTGGTGCAACTGGTaGTGCTGGGTGGGCATGGCTCTGGACCACCTGGCC +
Preference number: 6 (lower is better)
Translates to: LKLLLSLYWCNW*CWVGMALDHLA
Trigger: GGCCAGGTGGTCCAGAGCCATGCCCACCCAGCACCACCAGTTGCACCAGTACAGGGACAGCAGCAGTTTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 90 bp GGGCATGGCTCTGGACCACCTGGCCTCCATGAGGCTGGACAGCTGTaGGGTGATGATGGCTGCTATGAACTGCTGCTATGGCGGGCCCAT +
Preference number: 6 (lower is better)
Translates to: GHGSGPPGLHEAGQL*GDDGCYELLLWRAH
Trigger: ATGGGCCCGCCATAGCAGCAGTTCATAGCAGCCATCATCACCCAACAGCTGTCCAGCCTCATGGAGGCCAGGTGGTCCAGAGCCATGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp CCTCTGAAACTGCTGCTGTCCCTGTACTGGTGCAACTaGTGGTGCTGGGTGGGCATGGCTCTGGACCACCTG +
Preference number: 6 (lower is better)
Translates to: PLKLLLSLYWCN*WCWVGMALDHL
Trigger: CAGGTGGTCCAGAGCCATGCCCACCCAGCACCACCAGTTGCACCAGTACAGGGACAGCAGCAGTTTCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS GCA 72 bp GGGCAAGGACCCGGTGCTGGTGAGAAAAAGCCTCTGTaGTCCCAGGAATCCTTCGCTGCTGGGCTGCATACA +
Preference number: 6 (lower is better)
Translates to: GQGPGAGEKKPL*SQESFAAGLHT
Trigger: TGTATGCAGCCCAGCAGCGAAGGATTCCTGGGAGCACAGAGGCTTTTTCTCACCAGCACCGGGTCCTTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000049169.6
ENSMUST00000163400.8
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
ENSMUST00000169879.8
CDS GCA 72 bp TCTTCACTGGAGGTGTGGCTCCTGTTCCAGAGTGCCTaGGGATCTGGCAGCCATTCTGACTGGGCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: SSLEVWLLFQSA*GSGSHSDWASV
Trigger: CACAGAGGCCCAGTCAGAATGGCTGCCAGATCCGCAGGCACTCTGGAACAGGAGCCACACCTCCAGTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS GCA 72 bp CTCGAGCCCCTCACCCATGAGCCATTTGCTGGTCTCTaGTGCCATTTCCCGAGGCACATGCTCCTTGGTCCA +
Preference number: 6 (lower is better)
Translates to: LEPLTHEPFAGL*CHFPRHMLLGP
Trigger: TGGACCAAGGAGCATGTGCCTCGGGAAATGGCAGCAGAGACCAGCAAATGGCTCATGGGTGAGGGGCTCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp CACCTTGAGCCTCTGAAACTGCTGCTGTCCCTGTACTaGTGCAACTGGTGGTGCTGGGTGGGCATGGCTCTG +
Preference number: 6 (lower is better)
Translates to: HLEPLKLLLSLY*CNWWCWVGMAL
Trigger: CAGAGCCATGCCCACCCAGCACCACCAGTTGCACCAGTACAGGGACAGCAGCAGTTTCAGAGGCTCAAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp GACTGGTGGAGAACGTGGGGATGCATATGGTGGGAGTaGGGGAGTCTGCTGACTGGCTGGAGTATGTGCTTG +
Preference number: 6 (lower is better)
Translates to: DWWRTWGCIWWE*GSLLTGWSMCL
Trigger: CAAGCACATACTCCAGCCAGTCAGCAGACTCCCCCACTCCCACCATATGCATCCCCACGTTCTCCACCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp CAAGGAGATTGTCACTGGTGTGTGAGGCTGGACTGGTaGAGAACGTGGGGATGCATATGGTGGGAGTGGGGG +
Preference number: 6 (lower is better)
Translates to: QGDCHWCVRLDW*RTWGCIWWEWG
Trigger: CCCCCACTCCCACCATATGCATCCCCACGTTCTCCACCAGTCCAGCCTCACACACCAGTGACAATCTCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp CCCCAAGGAGATTGTCACTGGTGTGTGAGGCTGGACTaGTGGAGAACGTGGGGATGCATATGGTGGGAGTGG +
Preference number: 6 (lower is better)
Translates to: PQGDCHWCVRLD*WRTWGCIWWEW
Trigger: CCACTCCCACCATATGCATCCCCACGTTCTCCACCAGTCCAGCCTCACACACCAGTGACAATCTCCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp CCTGCGGATCTGGCAGCCATTCTGACTGGGCCTCTGTaGCTTGTTATTCAGTTGGGGCTTCTTCACAGTGCC +
Preference number: 6 (lower is better)
Translates to: PADLAAILTGPL*LVIQLGLLHSA
Trigger: GGCACTGTGAAGAAGCCCCAACTGAATAACAAGCCACAGAGGCCCAGTCAGAATGGCTGCCAGATCCGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp TGGTCTCTGCTGCCATTTCCCGAGGCACATGCTCCTTaGTCCATTTATCCACCCAGGCCTGGAACCGCTGAT +
Preference number: 6 (lower is better)
Translates to: WSLLPFPEAHAP*SIYPPRPGTAD
Trigger: ATCAGCGGTTCCAGGCCTGGGTGGATAAATGGACCAAGGAGCATGTGCCTCGGGAAATGGCAGCAGAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 72 bp TCTGGACCACCTGGCCTCCATGAGGCTGGACAGCTGTaGGGTGATGATGGCTGCTATGAACTGCTGCTATGG +
Preference number: 6 (lower is better)
Translates to: SGPPGLHEAGQL*GDDGCYELLLW
Trigger: CCATAGCAGCAGTTCATAGCAGCCATCATCACCCAACAGCTGTCCAGCCTCATGGAGGCCAGGTGGTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
ENSMUST00000169879.8
CDS GCA 72 bp GGCTGCTATGAACTGCTGCTATGGCGGGCCCATGACTaGCAGAACTTTGTGGCACAGCTGAAACCTGGTAGT +
Preference number: 6 (lower is better)
Translates to: GCYELLLWRAHD*QNFVAQLKPGS
Trigger: ACTACCAGGTTTCAGCTGTGCCACAAAGTTCTGGCAGTCATGGGCCCGCCATAGCAGCAGTTCATAGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
ENSMUST00000169879.8
CDS GCA 72 bp GACAGCTGTTGGGTGATGATGGCTGCTATGAACTGCTaGTATGGCGGGCCCATGACTGCCAGAACTTTGTGG +
Preference number: 6 (lower is better)
Translates to: DSCWVMMAAMNC*YGGPMTARTLW
Trigger: CCACAAAGTTCTGGCAGTCATGGGCCCGCCATAGCAGCAGTTCATAGCAGCCATCATCACCCAACAGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
ENSMUST00000169879.8
CDS CCA 72 bp CTGTTGGGTGATGATGGCTGCTATGAACTGCTGCTATaGCGGGCCCATGACTGCCAGAACTTTGTGGCACAG +
Preference number: 6 (lower is better)
Translates to: LLGDDGCYELLL*RAHDCQNFVAQ
Trigger: CTGTGCCACAAAGTTCTGGCAGTCATGGGCCCGCCATAGCAGCAGTTCATAGCAGCCATCATCACCCAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
ENSMUST00000169879.8
CDS CCA 72 bp TTCCAGAGTGCCTGCGGATCTGGCAGCCATTCTGACTaGGCCTCTGTGGCTTGTTATTCAGTTGGGGCTTCT +
Preference number: 6 (lower is better)
Translates to: FQSACGSGSHSD*ASVACYSVGAS
Trigger: AGAAGCCCCAACTGAATAACAAGCCACAGAGGCCCAGTCAGAATGGCTGCCAGATCCGCAGGCACTCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS TCA 72 bp GACGCTTGCTTACACGCTCATGGGACTGATGAGCTCTaGGTAGAGCAGTTCTCCGGTACATGTAGTCCTCCG +
Preference number: 6 (lower is better)
Translates to: DACLHAHGTDEL*VEQFSGTCSPP
Trigger: CGGAGGACTACATGTACCGGAGAACTGCTCTACTCAGAGCTCATCAGTCCCATGAGCGTGTAAGCAAGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp AGCCACCTGGGCATACACCTCTTGCTCAGTCAAAGCTaGAGTGTAGTTTCCTCCAGCTTCCTTGGCATTCCG +
Preference number: 6 (lower is better)
Translates to: SHLGIHLLLSQS*SVVSSSFLGIP
Trigger: CGGAATGCCAAGGAAGCTGGAGGAAACTACACTCCAGCTTTGACTGAGCAAGAGGTGTATGCCCAGGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp GAAAAAGCCTCTGTGCTCCCAGGAATCCTTCGCTGCTaGGCTGCATACACTGGTGATTCCTGGTCATCCAAA +
Preference number: 6 (lower is better)
Translates to: EKASVLPGILRC*AAYTGDSWSSK
Trigger: TTTGGATGACCAGGAATCACCAGTGTATGCAGCCCAGCAGCGAAGGATTCCTGGGAGCACAGAGGCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000049169.6
ENSMUST00000163400.8
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
ENSMUST00000169879.8
CDS CAA 72 bp CTGGGGCTGGATGCCATGGGTGGGAATCTGATGAACTaGGCCAGGTGTTGTCACGTTCACCATGTCATTAGT +
Preference number: 6 (lower is better)
Translates to: LGLDAMGGNLMN*ARCCHVHHVIS
Trigger: ACTAATGACATGGTGAACGTGACAACACCTGGCCAAGTTCATCAGATTCCCACCCATGGCATCCAGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 90 bp ATCTTCCTGGTTTTTGAAGAGTCGAGCCACCTGGGCATACACCTCTaGCTCAGTCAAAGCTGGAGTGTAGTTTCCTCCAGCTTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: IFLVFEESSHLGIHL*LSQSWSVVSSSFLG
Trigger: GCCAAGGAAGCTGGAGGAAACTACACTCCAGCTTTGACTGAGCAAGAGGTGTATGCCCAGGTGGCTCGACTCTTCAAAAACCAGGAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 90 bp GATCTGGCAGCCATTCTGACTGGGCCTCTGTGGCTTGTTATTCAGTaGGGGCTTCTTCACAGTGCCTCCATGGTCATTTCTCACAGAATC +
Preference number: 6 (lower is better)
Translates to: DLAAILTGPLWLVIQ*GLLHSASMVISHRI
Trigger: GATTCTGTGAGAAATGACCATGGAGGCACTGTGAAGAAGCCCCAACTGAATAACAAGCCACAGAGGCCCAGTCAGAATGGCTGCCAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS TCA 72 bp AGTAGTATCAGAACTCATATATCGCTCCACGTAGTCTaGCCAACGTGTCCACACCTCTGCTTCCACGGGGTC +
Preference number: 6 (lower is better)
Translates to: SSIRTHISLHVV*PTCPHLCFHGV
Trigger: GACCCCGTGGAAGCAGAGGTGTGGACACGTTGGTCAGACTACGTGGAGCGATATATGAGTTCTGATACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168177.8
ENSMUST00000168502.8
CDS GCA 72 bp CATTTAAAACCTCTTTACACAGAGGAGTCCGTCCCGTaGACTTGGGCTGCTGGTAACTTTTCGGTAGGGCTC +
Preference number: 6 (lower is better)
Translates to: HLKPLYTEESVP*TWAAGNFSVGL
Trigger: GAGCCCTACCGAAAAGTTACCAGCAGCCCAAGTGCACGGGACGGACTCCTCTGTGTAAAGAGGTTTTAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 72 bp GATTGTTTTGCAAAGATGGAGCTGTCCCCAAGGAGATaGTCACTGGTGTGTGAGGCTGGACTGGTGGAGAAC +
Preference number: 6 (lower is better)
Translates to: DCFAKMELSPRR*SLVCEAGLVEN
Trigger: GTTCTCCACCAGTCCAGCCTCACACACCAGTGACAATCTCCTTGGGGACAGCTCCATCTTTGCAAAACAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 72 bp GTTTTTGAAGAGTCGAGCCACCTGGGCATACACCTCTaGCTCAGTCAAAGCTGGAGTGTAGTTTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: VFEESSHLGIHL*LSQSWSVVSSS
Trigger: GCTGGAGGAAACTACACTCCAGCTTTGACTGAGCAAGAGGTGTATGCCCAGGTGGCTCGACTCTTCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 72 bp GCCATTCTGACTGGGCCTCTGTGGCTTGTTATTCAGTaGGGGCTTCTTCACAGTGCCTCCATGGTCATTTCT +
Preference number: 6 (lower is better)
Translates to: AILTGPLWLVIQ*GLLHSASMVIS
Trigger: AGAAATGACCATGGAGGCACTGTGAAGAAGCCCCAACTGAATAACAAGCCACAGAGGCCCAGTCAGAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS TCA 72 bp TGTCAGCATATATCCTCTGGAGTGCTTTTCGATGGATaGCTTCGGACGTGCCTCCAAGGGTGTTATCCAAGC +
Preference number: 6 (lower is better)
Translates to: CQHISSGVLFDG*LRTCLQGCYPS
Trigger: GCTTGGATAACACCCTTGGAGGCACGTCCGAAGTCATCCATCGAAAAGCACTCCAGAGGATATATGCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS TCA 72 bp TCCTCCTCTTCTTCCACATCTGAGAGATCGCCTCTCTaGGCAAACAGCAGGTCAGGAATGAAATGGTGCATG +
Preference number: 6 (lower is better)
Translates to: SSSSSTSERSPL*ANSRSGMKWCM
Trigger: CATGCACCATTTCATTCCTGACCTGCTGTTTGCTCAGAGAGGCGATCTCTCAGATGTGGAAGAAGAGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS TCA 72 bp TCTTTCCCTTCTTTTTCCTGTTGCTCTCGACCACGTTaGCACTTCCGGATACGCCGCAAATTCCTTGGGAGA +
Preference number: 6 (lower is better)
Translates to: SFPSFSCCSRPR*HFRIRRKFLGR
Trigger: TCTCCCAAGGAATTTGCGGCGTATCCGGAAGTGTCAACGTGGTCGAGAGCAACAGGAAAAAGAAGGGAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS GCA 72 bp GGAGGGGTTCTTCCTCAGGCCATCGATGATATCAGCTaGTTTGTCAGCATATATCCTCTGGAGTGCTTTTCG +
Preference number: 6 (lower is better)
Translates to: GGVLPQAIDDIS*FVSIYPLECFS
Trigger: CGAAAAGCACTCCAGAGGATATATGCTGACAAAGCAGCTGATATCATCGATGGCCTGAGGAAGAACCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp GCTTTGTCAGCATATATCCTCTGGAGTGCTTTTCGATaGATGACTTCGGACGTGCCTCCAAGGGTGTTATCC +
Preference number: 6 (lower is better)
Translates to: ALSAYILWSAFR*MTSDVPPRVLS
Trigger: GGATAACACCCTTGGAGGCACGTCCGAAGTCATCCATCGAAAAGCACTCCAGAGGATATATGCTGACAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 72 bp TCCTTGAGACGTAGTTGTATGGCAGGACTATCACTCTaGTCTCGCTTTATGCCTAGCACCTCCCGTTCCCAT +
Preference number: 6 (lower is better)
Translates to: SLRRSCMAGLSL*SRFMPSTSRSH
Trigger: ATGGGAACGGGAGGTGCTAGGCATAAAGCGAGACAAGAGTGATAGTCCTGCCATACAACTACGTCTCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 72 bp TTCTTTCCCTTCTTTTTCCTGTTGCTCTCGACCACGTaGACACTTCCGGATACGCCGCAAATTCCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: FFPFFFLLLSTT*TLPDTPQIPWE
Trigger: CTCCCAAGGAATTTGCGGCGTATCCGGAAGTGTCAACGTGGTCGAGAGCAACAGGAAAAAGAAGGGAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 90 bp GCAATGGAGGGGTTCTTCCTCAGGCCATCGATGATATCAGCTGCTTaGTCAGCATATATCCTCTGGAGTGCTTTTCGATGGATGACTTCG +
Preference number: 6 (lower is better)
Translates to: AMEGFFLRPSMISAA*SAYILWSAFRWMTS
Trigger: CGAAGTCATCCATCGAAAAGCACTCCAGAGGATATATGCTGACAAAGCAGCTGATATCATCGATGGCCTGAGGAAGAACCCCTCCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 90 bp TCCATAGGTTCCTTGAGACGTAGTTGTATGGCAGGACTATCACTCTaGTCTCGCTTTATGCCTAGCACCTCCCGTTCCCATTCTCTCTCT +
Preference number: 6 (lower is better)
Translates to: SIGSLRRSCMAGLSL*SRFMPSTSRSHSLS
Trigger: AGAGAGAGAATGGGAACGGGAGGTGCTAGGCATAAAGCGAGACAAGAGTGATAGTCCTGCCATACAACTACGTCTCAAGGAACCTATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS GCA 72 bp GATATCAGCTGCTTTGTCAGCATATATCCTCTGGAGTaGTTTTCGATGGATGACTTCGGACGTGCCTCCAAG +
Preference number: 6 (lower is better)
Translates to: DISCFVSIYPLE*FSMDDFGRASK
Trigger: CTTGGAGGCACGTCCGAAGTCATCCATCGAAAAGCACTCCAGAGGATATATGCTGACAAAGCAGCTGATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp AAGCCCATGATCAGATCAGGGTGGCCTTTAAATAGCTaGGACACTCGGCTAATCACTCCTGGAGTATCAATG +
Preference number: 6 (lower is better)
Translates to: KPMIRSGWPLNS*DTRLITPGVSM
Trigger: CATTGATACTCCAGGAGTGATTAGCCGAGTGTCCCAGCTATTTAAAGGCCACCCTGATCTGATCATGGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049169.6
ENSMUST00000163400.8
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp GGCAAGAAGGTGTTAAAGCCCATGATCAGATCAGGGTaGCCTTTAAATAGCTGGGACACTCGGCTAATCACT +
Preference number: 6 (lower is better)
Translates to: GKKVLKPMIRSG*PLNSWDTRLIT
Trigger: AGTGATTAGCCGAGTGTCCCAGCTATTTAAAGGCCACCCTGATCTGATCATGGGCTTTAACACCTTCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000049169.6
ENSMUST00000163400.8
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp AACAAATCTTCCTGGTTTTTGAAGAGTCGAGCCACCTaGGCATACACCTCTTGCTCAGTCAAAGCTGGAGTG +
Preference number: 6 (lower is better)
Translates to: NKSSWFLKSRAT*AYTSCSVKAGV
Trigger: CACTCCAGCTTTGACTGAGCAAGAGGTGTATGCCCAGGTGGCTCGACTCTTCAAAAACCAGGAAGATTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp GGCAGGAACTGTCCAAATTCAGACAACAAATCTTCCTaGTTTTTGAAGAGTCGAGCCACCTGGGCATACACC +
Preference number: 6 (lower is better)
Translates to: GRNCPNSDNKSS*FLKSRATWAYT
Trigger: GGTGTATGCCCAGGTGGCTCGACTCTTCAAAAACCAGGAAGATTTGTTGTCTGAATTTGGACAGTTCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp CGGACGTGCCTCCAAGGGTGTTATCCAAGCGAAATTTaGCTTGTTCCTCAGCAGACAAGCGAGAAAGTTTTT +
Preference number: 6 (lower is better)
Translates to: RTCLQGCYPSEI*LVPQQTSEKVF
Trigger: AAAAACTTTCTCGCTTGTCTGCTGAGGAACAAGCCAAATTTCGCTTGGATAACACCCTTGGAGGCACGTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 72 bp TCGGACGTGCCTCCAAGGGTGTTATCCAAGCGAAATTaGGCTTGTTCCTCAGCAGACAAGCGAGAAAGTTTT +
Preference number: 6 (lower is better)
Translates to: SDVPPRVLSKRN*ACSSADKRESF
Trigger: AAAACTTTCTCGCTTGTCTGCTGAGGAACAAGCCAAATTTCGCTTGGATAACACCCTTGGAGGCACGTCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 72 bp GGGTTCTTCCTCAGGCCATCGATGATATCAGCTGCTTaGTCAGCATATATCCTCTGGAGTGCTTTTCGATGG +
Preference number: 6 (lower is better)
Translates to: GFFLRPSMISAA*SAYILWSAFRW
Trigger: CCATCGAAAAGCACTCCAGAGGATATATGCTGACAAAGCAGCTGATATCATCGATGGCCTGAGGAAGAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS TCA 72 bp AGTAGTACTTCTCATTTTGCTCTCGCCAGACCTTGTTaGAGCCTCTCTGAGCTTCTCGCCACTCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: SSTSHFALARPC*SLSELLATLLL
Trigger: AAGAAGAAGAGTGGCGAGAAGCTCAGAGAGGCTTCAACAAGGTCTGGCGAGAGCAAAATGAGAAGTACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp CAGTCAAAGCTGGAGTGTAGTTTCCTCCAGCTTCCTTaGCATTCCGCTGTTCTTTCTGGTATGTGTGCAAAA +
Preference number: 6 (lower is better)
Translates to: QSKLECSFLQLP*HSAVLSGMCAK
Trigger: TTTTGCACACATACCAGAAAGAACAGCGGAATGCCAAGGAAGCTGGAGGAAACTACACTCCAGCTTTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp TCGATGATATCAGCTGCTTTGTCAGCATATATCCTCTaGAGTGCTTTTCGATGGATGACTTCGGACGTGCCT +
Preference number: 6 (lower is better)
Translates to: SMISAALSAYIL*SAFRWMTSDVP
Trigger: AGGCACGTCCGAAGTCATCCATCGAAAAGCACTCCAGAGGATATATGCTGACAAAGCAGCTGATATCATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS TCA 72 bp ACTGTCCAAATTCAGACAACAAATCTTCCTGGTTTTTaGAGAGTCGAGCCACCTGGGCATACACCTCTTGCT +
Preference number: 6 (lower is better)
Translates to: TVQIQTTNLPGF*RVEPPGHTPLA
Trigger: AGCAAGAGGTGTATGCCCAGGTGGCTCGACTCTTCAAAAACCAGGAAGATTTGTTGTCTGAATTTGGACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS GCA 72 bp TCTGTGGCTTGTTATTCAGTTGGGGCTTCTTCACAGTaGCTCCATGGTCATTTCTCACAGAATCAACCTTCT +
Preference number: 6 (lower is better)
Translates to: SVACYSVGASSQ*LHGHFSQNQPS
Trigger: AGAAGGTTGATTCTGTGAGAAATGACCATGGAGGCACTGTGAAGAAGCCCCAACTGAATAACAAGCCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp TATCTCCATGGCAATGCCTTCTGTAGCTCGTTCCTTTaGAAAGCTTTCCAGATGTACAGACTCCTTATAGCC +
Preference number: 6 (lower is better)
Translates to: YLHGNAFCSSFL*KAFQMYRLLIA
Trigger: GGCTATAAGGAGTCTGTACATCTGGAAAGCTTTCCAAAGGAACGAGCTACAGAAGGCATTGCCATGGAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp TCTCAGCAGTTGTTTTGCTTAAAAGCACTGAGCTGTTaGCATCTGGCAGGAACTGTCCAAATTCAGACAACA +
Preference number: 6 (lower is better)
Translates to: SQQLFCLKALSC*HLAGTVQIQTT
Trigger: TGTTGTCTGAATTTGGACAGTTCCTGCCAGATGCCAACAGCTCAGTGCTTTTAAGCAAAACAACTGCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 72 bp TCATTTCTCACAGAATCAACCTTCTCAGCAGTTGTTTaGCTTAAAAGCACTGAGCTGTTGGCATCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: SFLTESTFSAVV*LKSTELLASGR
Trigger: CCTGCCAGATGCCAACAGCTCAGTGCTTTTAAGCAAAACAACTGCTGAGAAGGTTGATTCTGTGAGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 90 bp ATTAACATAGTTGATGGCATGATTAAACTCCACAGGCTGATTGTTTaGCAAAGATGGAGCTGTCCCCAAGGAGATTGTCACTGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: INIVDGMIKLHRLIV*QRWSCPQGDCHWCV
Trigger: CACACACCAGTGACAATCTCCTTGGGGACAGCTCCATCTTTGCAAAACAATCAGCCTGTGGAGTTTAATCATGCCATCAACTATGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 90 bp GCCTCTCTGAGCAAACAGCAGGTCAGGAATGAAATGGTGCATGATTaGCTTGATTTTGTATTTGTCCTCTTTCTGAATGCCTGTTTGCCT +
Preference number: 6 (lower is better)
Translates to: ASLSKQQVRNEMVHD*LDFVFVLFLNACLP
Trigger: AGGCAAACAGGCATTCAGAAAGAGGACAAATACAAAATCAAGCAAATCATGCACCATTTCATTCCTGACCTGCTGTTTGCTCAGAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS GCA 72 bp CTGTTCTTTCTGGTATGTGTGCAAAATCTCCAAGAATaGTTTGTAGATGTCTGGTTGGCCCTGGAATCTGTT +
Preference number: 6 (lower is better)
Translates to: LFFLVCVQNLQE*FVDVWLALESV
Trigger: AACAGATTCCAGGGCCAACCAGACATCTACAAAGCATTCTTGGAGATTTTGCACACATACCAGAAAGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CAA 90 bp CTGGTATGTGTGCAAAATCTCCAAGAATGCTTTGTAGATGTCTGGTaGGCCCTGGAATCTGTTCTTGATCTTATTAACATAGTTGATGGC +
Preference number: 6 (lower is better)
Translates to: LVCVQNLQECFVDVW*ALESVLDLINIVDG
Trigger: GCCATCAACTATGTTAATAAGATCAAGAACAGATTCCAGGGCCAACCAGACATCTACAAAGCATTCTTGGAGATTTTGCACACATACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS TCA 72 bp TGGGAACAAATCCGTAGCAGCCTCAAGCAGAGAATTTaGTGCAGTCGCATAAAGATATACCAATTGTTATTG +
Preference number: 6 (lower is better)
Translates to: WEQIRSSLKQRI*CSRIKIYQLLL
Trigger: CAATAACAATTGGTATATCTTTATGCGACTGCATCAAATTCTCTGCTTGAGGCTGCTACGGATTTGTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS CCA 72 bp TGTGTGCAAAATCTCCAAGAATGCTTTGTAGATGTCTaGTTGGCCCTGGAATCTGTTCTTGATCTTATTAAC +
Preference number: 6 (lower is better)
Translates to: CVQNLQECFVDV*LALESVLDLIN
Trigger: GTTAATAAGATCAAGAACAGATTCCAGGGCCAACCAGACATCTACAAAGCATTCTTGGAGATTTTGCACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8
CDS TCA 72 bp AAAAGGTTATATACTTCATCCATCCCTCTTAACTTTTaGGCTGCTGTGTTACTAAATAGCAACTTGGACTTA +
Preference number: 6 (lower is better)
Translates to: KRLYTSSIPLNF*AAVLLNSNLDL
Trigger: TAAGTCCAAGTTGCTATTTAGTAACACAGCAGCTCAAAAGTTAAGAGGGATGGATGAAGTATATAACCTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000049169.6
ENSMUST00000167715.8
ENSMUST00000168177.8
ENSMUST00000168502.8
ENSMUST00000168678.8