Pregenerated sensors for SIMC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043183Ensembl transcript IDs: ENSMUST00000118072.8, ENSMUST00000121401.8, ENSMUST00000138869.2, ENSMUST00000159721.2
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTaGAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATAT | + |
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Preference number: 1 (lower is better) Translates to: RAGRQYLDQCNTDGL*RRVLSHLAWKCWTY Trigger: ATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR GCA 90 bp | TCTTTACTACTTTCTCAAGCCCAGGTCTGTCTTGTCCATTCTGCCTaGCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTATCT | + |
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Preference number: 1 (lower is better) Translates to: SLLLSQAQVCLVHSA*PIVEPKHCKHLILS Trigger: AGATAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGACAAGACAGACCTGGGCTTGAGAAAGTAGTAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCCGAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCAGGAGGTATTCTTGGTaGGCAGTGCTTAGAAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LGRAGRQYLDQCNTDGLCRRYSW*AVLRSL Trigger: CAGACTTCTAAGCACTGCGCACCAAGAATACCTCCT...GCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTCGGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCAGAAGGGAGGAGGTATTCTTGGTaGGCAGTGCTTAGAAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: ERAVSILTSVTLMDCAEGRRYSW*AVLRSL Trigger: CAGACTTCTAAGCACTGCGCACCAAGAATACCTCCT...CCCTTCTGCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR-3UTR GCA 90 bp | TTGATTGGTGTTCTTGTTCTGGTTAGGCCGGGGAGACAGATGGTCACTGCTAGTATGGATTGCTGTAGGTaGTGCCGCTGTCTCCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: LIGVLVLVRPGRQMVTASMDCCR*CRCLLK Trigger: CTTGAGGAGACAGCGGCAGCACCTACAGCAATCCAT...ACTAGCAGTGACCATCTGTCTCCCCGGCCTAACCAGAACAAGAACACCAATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138869.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGCCGAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCCTTGCATGGAAATGTTaGACATATAGTGCATATCAC | + |
|
Preference number: 2 (lower is better) Translates to: LGRAGRQYLDQCNTDGLCLAWKC*TYSAYH Trigger: GTGATATGCACTATATGTCCAACATTTCCATGCAAG...GCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTCGGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGTCACTGCTAGTTTTCAAGACTCCTGTTCTTGGAGAGGTCTGAGTCTCATCGTGTTTGCAATGGATTaGTGTAGGTGCTGCCGCTGT | + |
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Preference number: 2 (lower is better) Translates to: MVTASFQDSCSWRGLSLIVFAMD*CRCCRC Trigger: ACAGCGGCAGCACCTACAGCAATCCATTGCAAACAC...GATGAGACTCAGACCTCTCCAAGAACAGGAGTCTTGAAAACTAGCAGTGACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138869.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGGTGTTCTTGTTCTGGTTAGGCCGGGGAGACAGATGGTCACTGCTAGTTTTCAAGACTCCTGTTCTTaGAGAGGTCTGAGTCTCATC | + |
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Preference number: 2 (lower is better) Translates to: IGVLVLVRPGRQMVTASFQDSCS*RGLSLI Trigger: GATGAGACTCAGACCTCTCCAAGAACAGGAGTCTTG...AAAACTAGCAGTGACCATCTGTCTCCCCGGCCTAACCAGAACAAGAACACCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138869.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTAAACACTGATGGATTGTaGAGAAGGGTTCTTTCACAT | + |
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Preference number: 2 (lower is better) Translates to: VHSACPIVEPKHCKHLILNTDGL*RRVLSH Trigger: ATGTGAAAGAACCCTTCTGCACAATCCATCAGTGTT...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR-3UTR GCA 90 bp | ATTGGTGTTCTTGTTCTGGTTAGGCCGGGGAGACAGATGGTCACTGCTAGTTTTTTCATTTTCAGTCACTaGTTTGACCAGCCACTTAAT | + |
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Preference number: 2 (lower is better) Translates to: IGVLVLVRPGRQMVTASFFIFSH*FDQPLN Trigger: ATTAAGTGGCTGGTCAAAGCAGTGACTGAAAATGAA...AAAACTAGCAGTGACCATCTGTCTCCCCGGCCTAACCAGAACAAGAACACCAAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000138869.2 |
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| 3UTR CAA 90 bp | ACCAGTGTAACACTGATGGATTGTGCAGAAGGGTTCTTTCACATCTaGCATGGAAATGTTGGACATATAGTGCATATCACTGCCTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: TSVTLMDCAEGFFHI*HGNVGHIVHITACF Trigger: GAAACAGGCAGTGATATGCACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATCCATCAGTGTTACACTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTATATAGTGCATATCACTaGCTGTTTCAAAAGCATAGA | + |
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Preference number: 2 (lower is better) Translates to: VHSACPIVEPKHCKHLILYSAYH*LFQKHR Trigger: TCTATGCTTTTGAAACAGGCAGTGATATGCACTATA...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTACTTTCACATCTTGCATaGAAATGTTGGACATATAGT | + |
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Preference number: 2 (lower is better) Translates to: VHSACPIVEPKHCKHLILLSHLA*KCWTYS Trigger: ACTATATGTCCAACATTTCCATGCAAGATGTGAAAG...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR-3UTR GCA 90 bp | GACCAGTGTAACACTGATGGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGTATAGTGCATATCACTaGCTGTTTCAAAAGCATAGA | + |
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Preference number: 2 (lower is better) Translates to: DQCNTDGLCRRVLSHLAWYSAYH*LFQKHR Trigger: TCTATGCTTTTGAAACAGGCAGTGATATGCACTATA...CCATGCAAGATGTGAAAGAACCCTTCTGCACAATCCATCAGTGTTACACTGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCCTTGCATGGAAATGTTaGACATATAGTGCATATCAC | + |
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Preference number: 2 (lower is better) Translates to: PSTVNILFYLINTTGLTGLAWKC*TYSAYH Trigger: GTGATATGCACTATATGTCCAACATTTCCATGCAAG...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCCTTTCACATCTTGCATaGAAATGTTGGACATATAGT | + |
|
Preference number: 2 (lower is better) Translates to: PSTVNILFYLINTTGLTGLSHLA*KCWTYS Trigger: ACTATATGTCCAACATTTCCATGCAAGATGTGAAAG...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR CCA 72 bp | TTGGTGTTCTTGTTCTGGTTAGGCCGGGGAGACAGATaGTCACTGCTAGTTTTCAAGACTCCTGTTCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: LVFLFWLGRGDR*SLLVFKTPVLG Trigger: TCCAAGAACAGGAGTCTTGAAAACTAGCAGTGACCATCTGTCTCCCCGGCCTAACCAGAACAAGAACACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138869.2 |
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| 3UTR-3UTR CAA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTAAGGTTTGACAGGCTCTaGTTTCTTTGCCTGCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: VHSACPIVEPKHCKHLILRFDRL*FLCLLC Trigger: ACAAAGCAGGCAAAGAAACAAGAGCCTGTCAAACCT...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR-3UTR CAA 90 bp | TGGAGCCCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGCGGGCCGTCAGTATCTaGACCAGTGTAACACTGATG | + |
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Preference number: 3 (lower is better) Translates to: WSPSTVNILFYLINTTGLRAVSI*TSVTLM Trigger: CATCAGTGTTACACTGGTCAAGATACTGACGGCCCG...CAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGGGCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR-3UTR CAA 90 bp | AGACTCCTGTTCTTGGAGAGGTCTGAGTCTCATCTTGGGGTGGAGTTAATTCATATGACAGAACAGTGTTaGCAATGGATTGCTGTAGGT | + |
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Preference number: 3 (lower is better) Translates to: RLLFLERSESHLGVELIHMTEQC*QWIAVG Trigger: ACCTACAGCAATCCATTGCAAACACTGTTCTGTCAT...ATGAATTAACTCCACCCCAAGATGAGACTCAGACCTCTCCAAGAACAGGAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138869.2 |
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| 3UTR-3UTR CAA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTAGTTTCTTTGCCTGCTTaGTTAGACTTAATAAACTGG | + |
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Preference number: 3 (lower is better) Translates to: VHSACPIVEPKHCKHLILVSLPA*LDLINW Trigger: CCAGTTTATTAAGTCTAACAAAGCAGGCAAAGAAAC...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAGACTCCTGTTCTTGGAGAGGTCTGAGTCTCATCTTGGGGTGGAGTTAATTTTTTCAGTCACTGCTTaGACCAGCCACTTAATAACA | + |
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Preference number: 3 (lower is better) Translates to: SRLLFLERSESHLGVELIFSVTA*TSHLIT Trigger: TGTTATTAAGTGGCTGGTCAAAGCAGTGACTGAAAA...AATTAACTCCACCCCAAGATGAGACTCAGACCTCTCCAAGAACAGGAGTCTTGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000138869.2 |
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| 3UTR TCA 72 bp | GCTTTGACCAGCCACTTAATAACATCTCTGACATTGTaGGGCTGTTTGTCACATGACAGAACAGTGTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: ALTSHLITSLTL*GCLSHDRTVFA Trigger: TGCAAACACTGTTCTGTCATGTGACAAACAGCCTCACAATGTCAGAGATGTTATTAAGTGGCTGGTCAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138869.2 |
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| 3UTR GCA 72 bp | CGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTaGAGAAGGGTTCTTTCACATCTTGCATGGAAATGT | + |
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Preference number: 3 (lower is better) Translates to: RQYLDQCNTDGL*RRVLSHLAWKC Trigger: ACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATCCATCAGTGTTACACTGGTCAAGATACTGACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR GCA 72 bp | AACACCACAGGTTTGACAGGCTCTTGTTTCTTTGCCTaGTTTGTTAGACTTAATAAACTGGCCACAGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: NTTGLTGSCFFA*FVRLNKLATES Trigger: TGACTCTGTGGCCAGTTTATTAAGTCTAACAAAGCAGGCAAAGAAACAAGAGCCTGTCAAACCTGTGGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR CCA 72 bp | TGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTaGACATATAGTGCATATCACTGCCTGTTTCAAAAG | + |
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Preference number: 3 (lower is better) Translates to: CRRVLSHLAWKC*TYSAYHCLFQK Trigger: CTTTTGAAACAGGCAGTGATATGCACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| 3UTR-3UTR CAA 90 bp | TGTTTCTTTGCCTGCTTTGTTAGACTTAATAAACTGGCCACAGAGTCATATTTAGGGTTCTTTCACATCTaGCATGGAAATGTTGGACAT | + |
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Preference number: 3 (lower is better) Translates to: CFFACFVRLNKLATESYLGFFHI*HGNVGH Trigger: ATGTCCAACATTTCCATGCAAGATGTGAAAGAACCC...TAAATATGACTCTGTGGCCAGTTTATTAAGTCTAACAAAGCAGGCAAAGAAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR TCA 90 bp | CTGGGCCGAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCTATCACACCTCCAGATaGTGGTGGCACACCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LGRAGRQYLDQCNTDGLCYHTSR*WWHTSW Trigger: CCAGGAGGTGTGCCACCATCATCTGGAGGTGTGATA...GCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTCGGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR TCA 90 bp | GAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCAGAAGGGGGCAAAGAGGCCCTCTaGTTGCTTGTGGAGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ERAVSILTSVTLMDCAEGGKEAL*LLVEEK Trigger: CTTCTCCTCCACAAGCAATCAGAGGGCCTCTTTGCC...CCCTTCTGCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR GCA 90 bp | CTGGGCCGAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCGTGTTTGCAATGGATTaGTGTAGGTGCTGCCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LGRAGRQYLDQCNTDGLCVFAMD*CRCCRC Trigger: ACAGCGGCAGCACCTACAGCAATCCATTGCAAACAC...GCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTCGGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR TCA 90 bp | CTGGGCCGAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCAGCAAGCCTTGTGATTaGCAAGGCACATCTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LGRAGRQYLDQCNTDGLCSKPCD*QGTSCC Trigger: ACAGCAAGATGTGCCTTGTCAATCACAAGGCTTGCT...GCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTCGGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR CCA 90 bp | CTGGGCCGAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCGCACGTGTTGATAACTaGACAGCAGGAACTGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: LGRAGRQYLDQCNTDGLCARVDN*TAGTAD Trigger: ATCTGCAGTTCCTGCTGTCCAGTTATCAACACGTGC...GCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTCGGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR GCA 90 bp | GAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCAGAAGGGGGTGTCTCACAGCTGTaGAGGAATATGATCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ERAVSILTSVTLMDCAEGGVSQL*RNMISR Trigger: CCTGGAGATCATATTCCTGCACAGCTGTGAGACACC...CCCTTCTGCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR GCA 90 bp | GAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCAGAAGGGCTGGACAGCAGGAACTaGAGATGTTCAACCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: ERAVSILTSVTLMDCAEGLDSRN*RCSTSS Trigger: TGAGCTGGTTGAACATCTGCAGTTCCTGCTGTCCAG...CCCTTCTGCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR GCA 90 bp | CTGGGCCGAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCAGCAGCTTCAACAAATaGACTTTGTCTTGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LGRAGRQYLDQCNTDGLCSSFNK*TLSWSW Trigger: CCAGCTCCAAGACAAAGTGCATTTGTTGAAGCTGCT...GCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTCGGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR GCA 90 bp | GAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCAGAAGGGACACCTCCTGGTGACTaGATCCTATCCCTTGATGAC | + |
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Preference number: 4 (lower is better) Translates to: ERAVSILTSVTLMDCAEGTPPGD*ILSLDD Trigger: GTCATCAAGGGATAGGATGCAGTCACCAGGAGGTGT...CCCTTCTGCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR CCA 90 bp | CTGGGCCGAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCTTGCATCGCAGAAGGTaGCTTTCCATGGTAGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: LGRAGRQYLDQCNTDGLCLHRRR*LSMVVK Trigger: CTTTACTACCATGGAAAGCCACCTTCTGCGATGCAA...GCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTCGGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CCA 90 bp | CTGGGCCGAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCATTTTGGGTAGAGCATaGCACTTCTTGAGGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LGRAGRQYLDQCNTDGLCILGRA*HFLRWL Trigger: CAACCACCTCAAGAAGTGCCATGCTCTACCCAAAAT...GCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTCGGCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR CCA 90 bp | ATTGGTGTTCTTGTTCTGGTTAGGCCGGGGAGACAGATGGTCACTGCTAGTTTTTGTCTTGGCATTGGCTaGATGCAGCCACGGTTCGGC | + |
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Preference number: 4 (lower is better) Translates to: IGVLVLVRPGRQMVTASFCLGIG*MQPRFG Trigger: GCCGAACCGTGGCTGCATCCAGCCAATGCCAAGACA...AAAACTAGCAGTGACCATCTGTCTCCCCGGCCTAACCAGAACAAGAACACCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138869.2 |
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| CDS-3UTR TCA 90 bp | CTGGGCCGAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCAGGCTGTTTGTCACATaGCAGAACAGTGTTTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: LGRAGRQYLDQCNTDGLCRLFVT*QNSVCN Trigger: ATTGCAAACACTGTTCTGTCATGTGACAAACAGCCT...GCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTCGGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR TCA 90 bp | GAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCAGAAGGGCATCACATCTCTTGGTaGCTGCATCACATCTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: ERAVSILTSVTLMDCAEGHHISW*LHHISW Trigger: CCAAGAGATGTGATGCAGTCACCAAGAGATGTGATG...CCCTTCTGCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR CCA 90 bp | CTGGGCCGAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCATGTCATCTCCTTGTTaGGGCTTGGGCTTAATTCTT | + |
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Preference number: 4 (lower is better) Translates to: LGRAGRQYLDQCNTDGLCMSSPC*GLGLIL Trigger: AAGAATTAAGCCCAAGCCCCAACAAGGAGATGACAT...GCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTCGGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR GCA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTAATGGATTGCTGTAGGTaGTGCCGCTGTCTCCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: VHSACPIVEPKHCKHLILMDCCR*CRCLLK Trigger: CTTGAGGAGACAGCGGCAGCACCTACAGCAATCCAT...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR GCA 90 bp | GAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCAGAAGGGCTATTTTATTGGAGCTaGAGGTTGGAGTCCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ERAVSILTSVTLMDCAEGLFYWS*RLESCP Trigger: TGGACAGGACTCCAACCTGCAGCTCCAATAAAATAG...CCCTTCTGCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR GCA 90 bp | GGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTTGTGGACCAGGCGGCTaGGGAAGGCCTCGATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLCRRVLSHLAWKCWTYSCGPGG*GRPRSA Trigger: AGCAGATCGAGGCCTTCCGCAGCCGCCTGGTCCACA...ACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR TCA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTAACACCTGCCGGTGACTaGATCACATCTCTTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VHSACPIVEPKHCKHLILTPAGD*ITSLDV Trigger: GACATCAAGAGATGTGATTCAGTCACCGGCAGGTGT...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
||
| CDS-3UTR TCA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTAATTTGTCCTTGTATCTaGGCAGACCCAGGGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VHSACPIVEPKHCKHLILICPCI*ADPGLA Trigger: TGCCAACCCTGGGTCTGCTCAGATACAAGGACAAAT...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
||
| CDS-3UTR GCA 90 bp | GACCAGTGTAACACTGATGGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGATGGATTGCTGTAGGTaGTGCCGCTGTCTCCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DQCNTDGLCRRVLSHLAWMDCCR*CRCLLK Trigger: CTTGAGGAGACAGCGGCAGCACCTACAGCAATCCAT...CCATGCAAGATGTGAAAGAACCCTTCTGCACAATCCATCAGTGTTACACTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGCCGAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCTTCATTTTCAGTCACTaGTTTGACCAGCCACTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGRAGRQYLDQCNTDGLCFIFSH*FDQPLN Trigger: ATTAAGTGGCTGGTCAAAGCAGTGACTGAAAATGAA...GCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTCGGCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR GCA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTACTGGACAGCAGGAACTaGAGATGTTCAACCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHSACPIVEPKHCKHLILLDSRN*RCSTSS Trigger: TGAGCTGGTTGAACATCTGCAGTTCCTGCTGTCCAG...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR GCA 90 bp | TTCTATCTTATTAACACCACAGGTTTGACAGGCTCTTGTTTCTTTGCCTGCTTTTGTGGACCAGGCGGCTaGGGAAGGCCTCGATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FYLINTTGLTGSCFFACFCGPGG*GRPRSA Trigger: AGCAGATCGAGGCCTTCCGCAGCCGCCTGGTCCACA...AAAGCAGGCAAAGAAACAAGAGCCTGTCAAACCTGTGGTGTTAATAAGATAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTACCACCTCTACAGCGATaGACAACATCCTCTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VHSACPIVEPKHCKHLILPPLQR*TTSSEA Trigger: AGCTTCAGAGGATGTTGTCCATCGCTGTAGAGGTGG...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | GACCAGTGTAACACTGATGGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGATTGGAGCTGCAGGTTaGAGTCCTGTCCACCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: DQCNTDGLCRRVLSHLAWIGAAG*SPVHLY Trigger: GTAGAGGTGGACAGGACTCCAACCTGCAGCTCCAAT...CCATGCAAGATGTGAAAGAACCCTTCTGCACAATCCATCAGTGTTACACTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR TCA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTATGCGTTTTATCTGATTaGCACTTGAGCAGGGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: VHSACPIVEPKHCKHLILCVLSD*HLSRDV Trigger: CACGTCCCTGCTCAAGTGTCAATCAGATAAAACGCA...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR TCA 90 bp | GGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTGGGCATGACAAAGCTTaGGGTGGGCATGACAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLCRRVLSHLAWKCWTYSGHDKA*GGHDRA Trigger: AGCCCTGTCATGCCCACCTCAAGCTTTGTCATGCCC...ACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
||
| CDS-3UTR TCA 90 bp | GGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTTGTCACACCTCCTGGTaGCTGCATCACACCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLCRRVLSHLAWKCWTYSCHTSW*LHHTSW Trigger: CCAGGAGGTGTGATGCAGTCACCAGGAGGTGTGACA...ACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
||
| CDS-3UTR TCA 90 bp | GACCAGTGTAACACTGATGGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAATCATACCTCTTGGTaGCTGTGTCACACCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DQCNTDGLCRRVLSHLAWNHTSW*LCHTSW Trigger: CCAGGAGGTGTGACACAGTCACCAAGAGGTATGATT...CCATGCAAGATGTGAAAGAACCCTTCTGCACAATCCATCAGTGTTACACTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | GACCAGTGTAACACTGATGGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGCCACCTCTACAGCGATaGACAACATCCTCTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DQCNTDGLCRRVLSHLAWPPLQR*TTSSEA Trigger: AGCTTCAGAGGATGTTGTCCATCGCTGTAGAGGTGG...CCATGCAAGATGTGAAAGAACCCTTCTGCACAATCCATCAGTGTTACACTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | GACCAGTGTAACACTGATGGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGACTTTGTCTTGGAGCTaGGGGACTAAAGGTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DQCNTDGLCRRVLSHLAWTLSWS*GTKGSP Trigger: GGGAGAACCTTTAGTCCCCCAGCTCCAAGACAAAGT...CCATGCAAGATGTGAAAGAACCCTTCTGCACAATCCATCAGTGTTACACTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR TCA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTACAGCATCATTCCTGGTaGCTTAATCATACCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHSACPIVEPKHCKHLILQHHSW*LNHTSW Trigger: CCAAGAGGTATGATTAAGTCACCAGGAATGATGCTG...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
||
| CDS-3UTR GCA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTATTGGCATTGGCTGGATaGAGCTGTTGGATTTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: VHSACPIVEPKHCKHLILLALAG*SCWIFM Trigger: CATGAAAATCCAACAGCTGCATCCAGCCAATGCCAA...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTAGCTGGATGCAGCTGTTaGATTTTCATGAGAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: VHSACPIVEPKHCKHLILAGCSC*IFMRSM Trigger: CATGCTTCTCATGAAAATCCAACAGCTGCATCCAGC...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGCCCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAAGGGGAGACGGGTaGGTGTCTCACAGCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WSPSTVNILFYLINTTGLTRGDG*VSHSCA Trigger: TGCACAGCTGTGAGACACCCACCCGTCTCCCCTTGT...CAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGGGCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | TTCTATCTTATTAACACCACAGGTTTGACAGGCTCTTGTTTCTTTGCCTGCTTTACAAGGGGAGACGGGTaGGTGTCTCACAGCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FYLINTTGLTGSCFFACFTRGDG*VSHSCA Trigger: TGCACAGCTGTGAGACACCCACCCGTCTCCCCTTGT...AAAGCAGGCAAAGAAACAAGAGCCTGTCAAACCTGTGGTGTTAATAAGATAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | GATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTGATTGGAGCTGCAGGTTaGAGTCCTGTCCACCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: DCAEGFFHILHGNVGHIVIGAAG*SPVHLY Trigger: GTAGAGGTGGACAGGACTCCAACCTGCAGCTCCAAT...CACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTAATGTCATCTCCTTGTTaGGGCTTGGGCTTAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VHSACPIVEPKHCKHLILMSSPC*GLGLIL Trigger: AAGAATTAAGCCCAAGCCCCAACAAGGAGATGACAT...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | TTCTATCTTATTAACACCACAGGTTTGACAGGCTCTTGTTTCTTTGCCTGCTTTAGGCACATCTTGCTGTaGGCATGGCAAAGAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FYLINTTGLTGSCFFACFRHILL*AWQRGP Trigger: AGGGCCTCTTTGCCATGCCCACAGCAAGATGTGCCT...AAAGCAGGCAAAGAAACAAGAGCCTGTCAAACCTGTGGTGTTAATAAGATAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
||
| 3UTR CAA 72 bp | GGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATaGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRQYLDQCNTDG*CRRVLSHLAWK Trigger: TTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR TCA 90 bp | GATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTGCATCACATCTCTTGGTaGCTGCATTACACCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DCAEGFFHILHGNVGHIVHHISW*LHYTSW Trigger: CCAGGAGGTGTAATGCAGTCACCAAGAGATGTGATG...CACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
||
| CDS-3UTR GCA 90 bp | GGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTACACCTCCTGGTGACTaGATCACACTTCCTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLCRRVLSHLAWKCWTYSTPPGD*ITLPDD Trigger: GTCATCAGGAAGTGTGATGCAGTCACCAGGAGGTGT...ACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | GGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTAAGAACATCTCCCTCTaGCTCCTCTCAGGGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: GLCRRVLSHLAWKCWTYSKNISL*LLSGIS Trigger: GGATATCCCTGAGAGGAGCCAGAGGGAGATGTTCTT...ACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR TCA 90 bp | GATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTGTGCGTTTTATCTGATTaGCACTTGAGCAGGGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: DCAEGFFHILHGNVGHIVCVLSD*HLSRDV Trigger: CACGTCCCTGCTCAAGTGTCAATCAGATAAAACGCA...CACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR TCA 90 bp | GATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTGTTTCTCTCTCCTGGCTaGGCTATCTGTGATAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DCAEGFFHILHGNVGHIVFLSPG*AICDSE Trigger: CTCACTATCACAGATAGCTCAGCCAGGAGAGAGAAA...CACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGCCCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGGTGTTTGCAATGGATTaGTGTAGGTGCTGCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WSPSTVNILFYLINTTGLVFAMD*CRCCRC Trigger: ACAGCGGCAGCACCTACAGCAATCCATTGCAAACAC...CAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGGGCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGCCCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGAAGAACATCTCCCTCTaGCTCCTCTCAGGGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: WSPSTVNILFYLINTTGLKNISL*LLSGIS Trigger: GGATATCCCTGAGAGGAGCCAGAGGGAGATGTTCTT...CAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGGGCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | TTCTATCTTATTAACACCACAGGTTTGACAGGCTCTTGTTTCTTTGCCTGCTTTACTTTGTCTTGGAGCTaGGGGACTAAAGGTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FYLINTTGLTGSCFFACFTLSWS*GTKGSP Trigger: GGGAGAACCTTTAGTCCCCCAGCTCCAAGACAAAGT...AAAGCAGGCAAAGAAACAAGAGCCTGTCAAACCTGTGGTGTTAATAAGATAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGCCCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGATCTTGCTGTGGGCATaGCAAAGAGGCCCTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: WSPSTVNILFYLINTTGLILLWA*QRGPLI Trigger: AATCAGAGGGCCTCTTTGCCATGCCCACAGCAAGAT...CAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGGGCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCGGGCACGGTACATTTTaGGTAGAGCATGGCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSTVNILFYLINTTGLTGGHGTF*VEHGTS Trigger: AGAAGTGCCATGCTCTACCCAAAATGTACCGTGCCC...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
||
| CDS-3UTR GCA 90 bp | GATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTGCTATTTTATTGGAGCTaGAGGTTGGAGTCCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DCAEGFFHILHGNVGHIVLFYWS*RLESCP Trigger: TGGACAGGACTCCAACCTGCAGCTCCAATAAAATAG...CACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCCAAGACTCCTGTTCTTaGAGAGGTCTGAGTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PSTVNILFYLINTTGLTGQDSCS*RGLSLI Trigger: GATGAGACTCAGACCTCTCCAAGAACAGGAGTCTTG...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCTCTCCGCTATTTTATTaGAGCTGCAGGTTGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSTVNILFYLINTTGLTGSPLFY*SCRLES Trigger: GGACTCCAACCTGCAGCTCCAATAAAATAGCGGAGA...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | TTCTATCTTATTAACACCACAGGTTTGACAGGCTCTTGTTTCTTTGCCTGCTTTGCACGTGTTGATAACTaGACAGCAGGAACTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FYLINTTGLTGSCFFACFARVDN*TAGTAD Trigger: ATCTGCAGTTCCTGCTGTCCAGTTATCAACACGTGC...AAAGCAGGCAAAGAAACAAGAGCCTGTCAAACCTGTGGTGTTAATAAGATAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTCTTTGCCTGCTTTGTTAGACTTAATAAACTGGCCACAGAGTCATATTTAGGTGTCTCACAGCTGTaGAGGAATATGATCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CFFACFVRLNKLATESYLGVSQL*RNMISR Trigger: CCTGGAGATCATATTCCTGCACAGCTGTGAGACACC...TAAATATGACTCTGTGGCCAGTTTATTAAGTCTAACAAAGCAGGCAAAGAAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCAGCAGCTTCAACAAATaGACTTTGTCTTGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSTVNILFYLINTTGLTGSSFNK*TLSWSW Trigger: CCAGCTCCAAGACAAAGTGCATTTGTTGAAGCTGCT...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCGCTGGATGCAGCTGTTaGATTTTCATGAGAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: PSTVNILFYLINTTGLTGAGCSC*IFMRSM Trigger: CATGCTTCTCATGAAAATCCAACAGCTGCATCCAGC...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCTGTCTTGGCATTGGCTaGATGCAGCTGTTGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSTVNILFYLINTTGLTGCLGIG*MQLLDF Trigger: AAAATCCAACAGCTGCATCCAGCCAATGCCAAGACA...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | TTCTATCTTATTAACACCACAGGTTTGACAGGCTCTTGTTTCTTTGCCTGCTTTTGTCTTGGCATTGGCTaGATGCAGCTGTTGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: FYLINTTGLTGSCFFACFCLGIG*MQLLDF Trigger: AAAATCCAACAGCTGCATCCAGCCAATGCCAAGACA...AAAGCAGGCAAAGAAACAAGAGCCTGTCAAACCTGTGGTGTTAATAAGATAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCTTGCATCGCAGAAGGTaGCTTTCCATGGTAGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSTVNILFYLINTTGLTGLHRRR*LSMVVK Trigger: CTTTACTACCATGGAAAGCCACCTTCTGCGATGCAA...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
||
| CDS-3UTR CCA 90 bp | TTCTATCTTATTAACACCACAGGTTTGACAGGCTCTTGTTTCTTTGCCTGCTTTAAATGCACTTTGTCTTaGAGCTGGGGGACTAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FYLINTTGLTGSCFFACFKCTLS*SWGTKG Trigger: ACCTTTAGTCCCCCAGCTCCAAGACAAAGTGCATTT...AAAGCAGGCAAAGAAACAAGAGCCTGTCAAACCTGTGGTGTTAATAAGATAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CCA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCAAATGCACTTTGTCTTaGAGCTGGGGGACTAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSTVNILFYLINTTGLTGKCTLS*SWGTKG Trigger: ACCTTTAGTCCCCCAGCTCCAAGACAAAGTGCATTT...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR TCA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCAGGCTGTTTGTCACATaGCAGAACAGTGTTTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSTVNILFYLINTTGLTGRLFVT*QNSVCN Trigger: ATTGCAAACACTGTTCTGTCATGTGACAAACAGCCT...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR GCA 90 bp | TTCTATCTTATTAACACCACAGGTTTGACAGGCTCTTGTTTCTTTGCCTGCTTTAAGTCCATTAAAAACTaGACAGTCCCCAAAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FYLINTTGLTGSCFFACFKSIKN*TVPKGK Trigger: CTTCCCTTTGGGGACTGTGCAGTTTTTAATGGACTT...AAAGCAGGCAAAGAAACAAGAGCCTGTCAAACCTGTGGTGTTAATAAGATAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR GCA 90 bp | TGTTTCTTTGCCTGCTTTGTTAGACTTAATAAACTGGCCACAGAGTCATATTTAACATCTCTTGGTGACTaGATTACACCTCCTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CFFACFVRLNKLATESYLTSLGD*ITPPGD Trigger: GTCACCAGGAGGTGTAATGCAGTCACCAAGAGATGT...TAAATATGACTCTGTGGCCAGTTTATTAAGTCTAACAAAGCAGGCAAAGAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR GCA 90 bp | TGGAGCCCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACACCTCCTGGTGACTaGATCCTATCTTTTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: WSPSTVNILFYLINTTGLTPPGD*ILSFDD Trigger: ATCATCAAAAGATAGGATGCAGTCACCAGGAGGTGT...CAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGGGCTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR GCA 90 bp | TGTTTCTTTGCCTGCTTTGTTAGACTTAATAAACTGGCCACAGAGTCATATTTAGGAGTATCACGATTCTaGACATCATTCGGGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CFFACFVRLNKLATESYLGVSRF*TSFGED Trigger: GTCTTCCCCGAATGATGTGCAGAATCGTGATACTCC...TAAATATGACTCTGTGGCCAGTTTATTAAGTCTAACAAAGCAGGCAAAGAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR CCA 90 bp | TGTTTCTTTGCCTGCTTTGTTAGACTTAATAAACTGGCCACAGAGTCATATTTATCTCCGCTATTTTATTaGAGCTGCAGGTTGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFFACFVRLNKLATESYLSPLFY*SCRLES Trigger: GGACTCCAACCTGCAGCTCCAATAAAATAGCGGAGA...TAAATATGACTCTGTGGCCAGTTTATTAAGTCTAACAAAGCAGGCAAAGAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR GCA 90 bp | TGTTTCTTTGCCTGCTTTGTTAGACTTAATAAACTGGCCACAGAGTCATATTTATTGGCATTGGCTGGATaGAGCTGTTGGATTTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: CFFACFVRLNKLATESYLLALAG*SCWIFM Trigger: CATGAAAATCCAACAGCTGCATCCAGCCAATGCCAA...TAAATATGACTCTGTGGCCAGTTTATTAAGTCTAACAAAGCAGGCAAAGAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR GCA 90 bp | GATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTGTTCATTTTCAGTCACTaGTTTGACCAGCCACTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: DCAEGFFHILHGNVGHIVFIFSH*FDQPLN Trigger: ATTAAGTGGCTGGTCAAAGCAGTGACTGAAAATGAA...CACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR GCA 90 bp | TGTTTCTTTGCCTGCTTTGTTAGACTTAATAAACTGGCCACAGAGTCATATTTAAATGGTGGCACATCTTaGAGTGACTGTAACACATCT | + |
|
Preference number: 4 (lower is better) Translates to: CFFACFVRLNKLATESYLNGGTS*SDCNTS Trigger: AGATGTGTTACAGTCACTGCAAGATGTGCCACCATT...TAAATATGACTCTGTGGCCAGTTTATTAAGTCTAACAAAGCAGGCAAAGAAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS GCA 90 bp | GGTTCTCCCAATATGTGGACCAGGCGGCTGCGGAAGGCCTCGATCTaGTTCTCCACATCCAGCACCGTGATGTCATCTCCTTGTTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSPNMWTRRLRKASI*FSTSSTVMSSPCWG Trigger: GCCCCAACAAGGAGATGACATCACGGTGCTGGATGTGGAGAAGCAGATCGAGGCCTTCCGCAGCCGCCTGGTCCACATATTGGGAGAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS GCA 90 bp | GTCTGGGCCAGAGACAAGGGGAGACGGGTGGGTGTCTCACAGCTGTaGAGGAATATGATCTCCAGGACTTTGCATCGCAGAAGGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VWARDKGRRVGVSQL*RNMISRTLHRRRWL Trigger: AAGCCACCTTCTGCGATGCAAAGTCCTGGAGATCATATTCCTGCACAGCTGTGAGACACCCACCCGTCTCCCCTTGTCTCTGGCCCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS CCA 90 bp | TGCACTTTGTCTTGGAGCTGGGGGACTAAAGGTTCTCCCAATATGTaGACCAGGCGGCTGCGGAAGGCCTCGATCTGCTTCTCCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: CTLSWSWGTKGSPNM*TRRLRKASICFSTS Trigger: GGATGTGGAGAAGCAGATCGAGGCCTTCCGCAGCCGCCTGGTCCACATATTGGGAGAACCTTTAGTCCCCCAGCTCCAAGACAAAGTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | CTGGGCCGAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCTTCAACAAATGCACTTaGTCTTGGAGCTGGGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LGRAGRQYLDQCNTDGLCFNKCT*SWSWGT Trigger: AGTCCCCCAGCTCCAAGACAAAGTGCATTTGTTGAA...GCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTCGGCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | CTGGGCCGAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCTCTCCTTGTTGGGGCTaGGGCTTAATTCTTTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LGRAGRQYLDQCNTDGLCSPCWG*GLILLM Trigger: CATCAAAAGAATTAAGCCCAAGCCCCAACAAGGAGA...GCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTCGGCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTACCGTGGCACACCTCCTaGGGACTGTATCACATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VHSACPIVEPKHCKHLILPWHTS*GLYHIS Trigger: GGAGATGTGATACAGTCCCAAGGAGGTGTGCCACGG...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS GCA 90 bp | GACTGTGTCACACCTCCTGGTGACTGCATCACACTTCCTGATGACTaGATCACACTTCTTAGTGACTGGGTCACACTTCCTGATGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: DCVTPPGDCITLPDD*ITLLSDWVTLPDDC Trigger: GCAGTCATCAGGAAGTGTGACCCAGTCACTAAGAAGTGTGATGCAGTCATCAGGAAGTGTGATGCAGTCACCAGGAGGTGTGACACAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS CCA 90 bp | CAATCACTGAGCTCCGTAGGTGCTCTCTCAGCACGTGTTGATAACTaGACAGCAGGAACTGCAGATGTTCAACCAGCTCATCCCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QSLSSVGALSARVDN*TAGTADVQPAHPMS Trigger: AGACATGGGATGAGCTGGTTGAACATCTGCAGTTCCTGCTGTCCAGTTATCAACACGTGCTGAGAGAGCACCTACGGAGCTCAGTGATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | GAGCGGGCCGTCAGTATCTTGACCAGTGTAACACTGATGGATTGTGCAGAAGGGGGCTGGATGCAGCTGTaGGATTTTCATGAGAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ERAVSILTSVTLMDCAEGGWMQL*DFHEKH Trigger: ATGCTTCTCATGAAAATCCAACAGCTGCATCCAGCC...CCCTTCTGCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | ATTGGTGTTCTTGTTCTGGTTAGGCCGGGGAGACAGATGGTCACTGCTAGTTTTTCGTCCAGGCAGAGTTaGTCCCTCTTCCTCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: IGVLVLVRPGRQMVTASFSSRQS*SLFLHD Trigger: GTCATGGAGGAAGAGGGACAAACTCTGCCTGGACGA...AAAACTAGCAGTGACCATCTGTCTCCCCGGCCTAACCAGAACAAGAACACCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138869.2 |
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| CDS CCA 90 bp | CAGGGATATCCAGCACAAACCCAAACATCATCTCCGCTATTTTATTaGAGCTGCAGGTTGGAGTCCTGTCCACCTCTACAGCGATGGACA | + |
|
Preference number: 5 (lower is better) Translates to: QGYPAQTQTSSPLFY*SCRLESCPPLQRWT Trigger: TGTCCATCGCTGTAGAGGTGGACAGGACTCCAACCTGCAGCTCCAATAAAATAGCGGAGATGATGTTTGGGTTTGTGCTGGATATCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS CCA 90 bp | CAGCTGTGCAGGAATATGATCTCCAGGACTTTGCATCGCAGAAGGTaGCTTTCCATGGTAGTAAAGAACATCTCCCTCTGGCTCCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QLCRNMISRTLHRRR*LSMVVKNISLWLLS Trigger: TGAGAGGAGCCAGAGGGAGATGTTCTTTACTACCATGGAAAGCCACCTTCTGCGATGCAAAGTCCTGGAGATCATATTCCTGCACAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS GCA 90 bp | TATCCAGCACAAACCCAAACATCATCTCCGCTATTTTATTGGAGCTaGAGGTTGGAGTCCTGTCCACCTCTACAGCGATGGACAACATCC | + |
|
Preference number: 5 (lower is better) Translates to: YPAQTQTSSPLFYWS*RLESCPPLQRWTTS Trigger: GGATGTTGTCCATCGCTGTAGAGGTGGACAGGACTCCAACCTGCAGCTCCAATAAAATAGCGGAGATGATGTTTGGGTTTGTGCTGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS GCA 90 bp | GACTGCATTACACTTCTTAGTGACTGCATCACACCTCCTGGTGACTaGATCATACTTCCTAGTGACTGTGTCACACCTCTTGGTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: DCITLLSDCITPPGD*IILPSDCVTPLGDC Trigger: GCAGTCACCAAGAGGTGTGACACAGTCACTAGGAAGTATGATGCAGTCACCAGGAGGTGTGATGCAGTCACTAAGAAGTGTAATGCAGTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS CCA 90 bp | CACAAACCCAAACATCATCTCCGCTATTTTATTGGAGCTGCAGGTTaGAGTCCTGTCCACCTCTACAGCGATGGACAACATCCTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HKPKHHLRYFIGAAG*SPVHLYSDGQHPLK Trigger: CTTCAGAGGATGTTGTCCATCGCTGTAGAGGTGGACAGGACTCCAACCTGCAGCTCCAATAAAATAGCGGAGATGATGTTTGGGTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS CCA 90 bp | GACTGGGTCACACTTCCTGATGACTGCATCACACTTCTTAGTGACTaGGTCACACTTCCTGGTGACTGCATCATACTTCCTAGTGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: DWVTLPDDCITLLSD*VTLPGDCIILPSDC Trigger: ACAGTCACTAGGAAGTATGATGCAGTCACCAGGAAGTGTGACCCAGTCACTAAGAAGTGTGATGCAGTCATCAGGAAGTGTGACCCAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTAACTGTGTCACACCTCTaGGTGACTGCATCACATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VHSACPIVEPKHCKHLILTVSHL*VTASHL Trigger: GAGATGTGATGCAGTCACCAAGAGGTGTGACACAGT...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS CCA 90 bp | TTTTATTGGAGCTGCAGGTTGGAGTCCTGTCCACCTCTACAGCGATaGACAACATCCTCTGAAGCTGACACACAATCAGTTGATTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FYWSCRLESCPPLQR*TTSSEADTQSVDWC Trigger: ACACCAATCAACTGATTGTGTGTCAGCTTCAGAGGATGTTGTCCATCGCTGTAGAGGTGGACAGGACTCCAACCTGCAGCTCCAATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | GACCAGTGTAACACTGATGGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGGTATCGAATCTTCTGTaGCCAGTGACACACCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: DQCNTDGLCRRVLSHLAWVSNLL*PVTHLL Trigger: CAGGAGGTGTGTCACTGGCAACAGAAGATTCGATAC...CCATGCAAGATGTGAAAGAACCCTTCTGCACAATCCATCAGTGTTACACTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS GCA 90 bp | GATTGTATTGCATCTCCTGATGCTGATGGCACATGTCCTGCTGACTaGATCCTATCTCTTGATGACTGTGGCACACTGTTTAGTGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: DCIASPDADGTCPAD*ILSLDDCGTLFSDC Trigger: ACAGTCACTAAACAGTGTGCCACAGTCATCAAGAGATAGGATGCAGTCAGCAGGACATGTGCCATCAGCATCAGGAGATGCAATACAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS GCA 90 bp | GACTGTATCATATCTCCAGATGATGGTGGCACACCTCCTGGTGACTaGATCCTATCTTTTGATGATAATGGCACACCTCCTTGTGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: DCIISPDDGGTPPGD*ILSFDDNGTPPCDC Trigger: ACAGTCACAAGGAGGTGTGCCATTATCATCAAAAGATAGGATGCAGTCACCAGGAGGTGTGCCACCATCATCTGGAGATATGATACAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | GATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTGTCGTCCAGGCAGAGTTaGTCCCTCTTCCTCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: DCAEGFFHILHGNVGHIVSSRQS*SLFLHD Trigger: GTCATGGAGGAAGAGGGACAAACTCTGCCTGGACGA...CACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | GACCAGTGTAACACTGATGGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGACTGCATCACATCTCTaGGTGACTGCATCACATCTC | + |
|
Preference number: 5 (lower is better) Translates to: DQCNTDGLCRRVLSHLAWTASHL*VTASHL Trigger: GAGATGTGATGCAGTCACCAAGAGATGTGATGCAGT...CCATGCAAGATGTGAAAGAACCCTTCTGCACAATCCATCAGTGTTACACTGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS CCA 90 bp | TCGATCTGCTTCTCCACATCCAGCACCGTGATGTCATCTCCTTGTTaGGGCTTGGGCTTAATTCTTTTGATGATTAAGTCTTTCCGATCA | + |
|
Preference number: 5 (lower is better) Translates to: SICFSTSSTVMSSPC*GLGLILLMIKSFRS Trigger: TGATCGGAAAGACTTAATCATCAAAAGAATTAAGCCCAAGCCCCAACAAGGAGATGACATCACGGTGCTGGATGTGGAGAAGCAGATCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | GGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTTATTGGAGCTGCAGGTaGGAGTCCTGTCCACCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: GLCRRVLSHLAWKCWTYSYWSCR*ESCPPL Trigger: TAGAGGTGGACAGGACTCCAACCTGCAGCTCCAATA...ACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | GACCAGTGTAACACTGATGGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGTCTCCTTGTTGGGGCTaGGGCTTAATTCTTTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: DQCNTDGLCRRVLSHLAWSPCWG*GLILLM Trigger: CATCAAAAGAATTAAGCCCAAGCCCCAACAAGGAGA...CCATGCAAGATGTGAAAGAACCCTTCTGCACAATCCATCAGTGTTACACTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | GGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTGTATCGAATCTCCTGTaGCCAGTGACACACCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLCRRVLSHLAWKCWTYSVSNLL*PVTHLL Trigger: CAGGAGGTGTGTCACTGGCAACAGGAGATTCGATAC...ACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCACTGCATCCTATCCCTaGATGACCGTGGCACACCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSTVNILFYLINTTGLTGTASYP*MTVAHL Trigger: GAGGTGTGCCACGGTCATCAAGGGATAGGATGCAGT...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | GACCAGTGTAACACTGATGGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGATGACAGAACAGTGTTaGCAATGGATTGCTGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: DQCNTDGLCRRVLSHLAWMTEQC*QWIAVG Trigger: ACCTACAGCAATCCATTGCAAACACTGTTCTGTCAT...CCATGCAAGATGTGAAAGAACCCTTCTGCACAATCCATCAGTGTTACACTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCTATTGGAGCTGCAGGTaGGAGTCCTGTCCACCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PSTVNILFYLINTTGLTGYWSCR*ESCPPL Trigger: TAGAGGTGGACAGGACTCCAACCTGCAGCTCCAATA...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | GATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTGCTCTCTCAGCACGTGTaGATAACTGGACAGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DCAEGFFHILHGNVGHIVLSQHV*ITGQQE Trigger: TTCCTGCTGTCCAGTTATCAACACGTGCTGAGAGAG...CACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | GTCCATTCTGCCTGCCCCATAGTGGAGCCCAAGCACTGTAAACATCTTATTCTAACTGAATCACATCTCTaGATGTCTGTGTCACATATC | + |
|
Preference number: 5 (lower is better) Translates to: VHSACPIVEPKHCKHLILTESHL*MSVSHI Trigger: GATATGTGACACAGACATCAAGAGATGTGATTCAGT...TAGAATAAGATGTTTACAGTGCTTGGGCTCCACTATGGGGCAGGCAGAATGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | GGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTGGCTGGATGCAGCTGTaGGATTTTCATGAGAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GLCRRVLSHLAWKCWTYSGWMQL*DFHEKH Trigger: ATGCTTCTCATGAAAATCCAACAGCTGCATCCAGCC...ACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | GATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTGGATGTCATCTCCTTGTaGGGGCTTGGGCTTAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: DCAEGFFHILHGNVGHIVDVISL*GLGLNS Trigger: AGAATTAAGCCCAAGCCCCAACAAGGAGATGACATC...CACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | TGGAGCCCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGCGTGATGTCATCTCCTaGTTGGGGCTTGGGCTTAAT | + |
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Preference number: 5 (lower is better) Translates to: WSPSTVNILFYLINTTGLRDVIS*LGLGLN Trigger: ATTAAGCCCAAGCCCCAACAAGGAGATGACATCACG...CAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGGGCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | TTCTATCTTATTAACACCACAGGTTTGACAGGCTCTTGTTTCTTTGCCTGCTTTCGTGATGTCATCTCCTaGTTGGGGCTTGGGCTTAAT | + |
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Preference number: 5 (lower is better) Translates to: FYLINTTGLTGSCFFACFRDVIS*LGLGLN Trigger: ATTAAGCCCAAGCCCCAACAAGGAGATGACATCACG...AAAGCAGGCAAAGAAACAAGAGCCTGTCAAACCTGTGGTGTTAATAAGATAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCTTGACAAGGCACATCTaGCTGTGGGCATGGCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: PSTVNILFYLINTTGLTGLTRHI*LWAWQR Trigger: TCTTTGCCATGCCCACAGCAAGATGTGCCTTGTCAA...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | GGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTTTGTGGTATTTGTCCTaGTATCTGAGCAGACCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLCRRVLSHLAWKCWTYSLWYLS*YLSRPR Trigger: CCTGGGTCTGCTCAGATACAAGGACAAATACCACAA...ACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCTTCAACAAATGCACTTaGTCTTGGAGCTGGGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: PSTVNILFYLINTTGLTGFNKCT*SWSWGT Trigger: AGTCCCCCAGCTCCAAGACAAAGTGCATTTGTTGAA...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | TGGAGCCCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACTGCATCACATCTCTaGGTGACTGCATTACACCTC | + |
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Preference number: 5 (lower is better) Translates to: WSPSTVNILFYLINTTGLTASHL*VTALHL Trigger: GAGGTGTAATGCAGTCACCAAGAGATGTGATGCAGT...CAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGGGCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCACTGCATCCTATCTCTaGATGACTGTGGCACACTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSTVNILFYLINTTGLTGTASYL*MTVAHC Trigger: ACAGTGTGCCACAGTCATCAAGAGATAGGATGCAGT...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | TGTTTCTTTGCCTGCTTTGTTAGACTTAATAAACTGGCCACAGAGTCATATTTACACTTCTTGAGGTGGTaGAGGCAAAGCTTGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CFFACFVRLNKLATESYLHFLRW*RQSLEL Trigger: CAACTCCAAGCTTTGCCTCAACCACCTCAAGAAGTG...TAAATATGACTCTGTGGCCAGTTTATTAAGTCTAACAAAGCAGGCAAAGAAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | GGATTGTGCAGAAGGGTTCTTTCACATCTTGCATGGAAATGTTGGACATATAGTTTTTCAGTCACTGCTTaGACCAGCCACTTAATAACA | + |
|
Preference number: 5 (lower is better) Translates to: GLCRRVLSHLAWKCWTYSFSVTA*TSHLIT Trigger: TGTTATTAAGTGGCTGGTCAAAGCAGTGACTGAAAA...ACTATATGTCCAACATTTCCATGCAAGATGTGAAAGAACCCTTCTGCACAATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS-3UTR CAA 90 bp | CCAAGCACTGTAAACATCTTATTCTATCTTATTAACACCACAGGTTTGACAGGCTTTTCAGTCACTGCTTaGACCAGCCACTTAATAACA | + |
|
Preference number: 5 (lower is better) Translates to: PSTVNILFYLINTTGLTGFSVTA*TSHLIT Trigger: TGTTATTAAGTGGCTGGTCAAAGCAGTGACTGAAAA...GCCTGTCAAACCTGTGGTGTTAATAAGATAGAATAAGATGTTTACAGTGCTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS CCA 72 bp | TCTTGGAGCTGGGGGACTAAAGGTTCTCCCAATATGTaGACCAGGCGGCTGCGGAAGGCCTCGATCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SWSWGTKGSPNM*TRRLRKASICF Trigger: GAAGCAGATCGAGGCCTTCCGCAGCCGCCTGGTCCACATATTGGGAGAACCTTTAGTCCCCCAGCTCCAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS CAA 90 bp | CTCCAGATGATGGTGGCACACCTCCTGGTGACTGCATCCTATCCCTaGATGACCGTGGCACACCTCCTTGGGACTGTATCACATCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LQMMVAHLLVTASYP*MTVAHLLGTVSHLP Trigger: CGGGAGATGTGATACAGTCCCAAGGAGGTGTGCCACGGTCATCAAGGGATAGGATGCAGTCACCAGGAGGTGTGCCACCATCATCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS GCA 72 bp | AATATGTGGACCAGGCGGCTGCGGAAGGCCTCGATCTaGTTCTCCACATCCAGCACCGTGATGTCATCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: NMWTRRLRKASI*FSTSSTVMSSP Trigger: AGGAGATGACATCACGGTGCTGGATGTGGAGAAGCAGATCGAGGCCTTCCGCAGCCGCCTGGTCCACATATT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS GCA 72 bp | GGACTAAAGGTTCTCCCAATATGTGGACCAGGCGGCTaGGGAAGGCCTCGATCTGCTTCTCCACATCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLKVLPICGPGG*GRPRSASPHPA Trigger: TGCTGGATGTGGAGAAGCAGATCGAGGCCTTCCGCAGCCGCCTGGTCCACATATTGGGAGAACCTTTAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS TCA 72 bp | GGAGACGGGTGGGTGTCTCACAGCTGTGCAGGAATATaGTCTCCAGGACTTTGCATCGCAGAAGGTGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GDGWVSHSCAGI*SPGLCIAEGGF Trigger: AAAGCCACCTTCTGCGATGCAAAGTCCTGGAGATCATATTCCTGCACAGCTGTGAGACACCCACCCGTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS GCA 72 bp | AGAGACAAGGGGAGACGGGTGGGTGTCTCACAGCTGTaGAGGAATATGATCTCCAGGACTTTGCATCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RDKGRRVGVSQL*RNMISRTLHRR Trigger: TCTGCGATGCAAAGTCCTGGAGATCATATTCCTGCACAGCTGTGAGACACCCACCCGTCTCCCCTTGTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS GCA 72 bp | GATGGCGGCACATCTCCCAGCAATGGTGGCACATCTTaGAGTGACTGTAACACATCTTGTAGTGACAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: DGGTSPSNGGTS*SDCNTSCSDSG Trigger: GCCACTGTCACTACAAGATGTGTTACAGTCACTGCAAGATGTGCCACCATTGCTGGGAGATGTGCCGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS CAA 90 bp | CGGGTGGGTGTCTCACAGCTGTGCAGGAATATGATCTCCAGGACTTaGCATCGCAGAAGGTGGCTTTCCATGGTAGTAAAGAACATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RVGVSQLCRNMISRT*HRRRWLSMVVKNIS Trigger: GGAGATGTTCTTTACTACCATGGAAAGCCACCTTCTGCGATGCAAAGTCCTGGAGATCATATTCCTGCACAGCTGTGAGACACCCACCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS GCA 72 bp | GGGTGTGTCGAGGATGCCATGATAAGCCTTGAGGTGTaGTTGGCATATTCTGCTGAGGGCACGGTACATTTT | + |
|
Preference number: 6 (lower is better) Translates to: GCVEDAMISLEV*LAYSAEGTVHF Trigger: AAAATGTACCGTGCCCTCAGCAGAATATGCCAAGCACACCTCAAGGCTTATCATGGCATCCTCGACACACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS CCA 72 bp | AGCTGCAGGTTGGAGTCCTGTCCACCTCTACAGCGATaGACAACATCCTCTGAAGCTGACACACAATCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SCRLESCPPLQR*TTSSEADTQSV Trigger: AACTGATTGTGTGTCAGCTTCAGAGGATGTTGTCCATCGCTGTAGAGGTGGACAGGACTCCAACCTGCAGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS CCA 72 bp | AGCTCCGTAGGTGCTCTCTCAGCACGTGTTGATAACTaGACAGCAGGAACTGCAGATGTTCAACCAGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SSVGALSARVDN*TAGTADVQPAH Trigger: ATGAGCTGGTTGAACATCTGCAGTTCCTGCTGTCCAGTTATCAACACGTGCTGAGAGAGCACCTACGGAGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS CAA 72 bp | TGTGTCGAGGATGCCATGATAAGCCTTGAGGTGTGCTaGGCATATTCTGCTGAGGGCACGGTACATTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CVEDAMISLEVC*AYSAEGTVHFG Trigger: CCCAAAATGTACCGTGCCCTCAGCAGAATATGCCAAGCACACCTCAAGGCTTATCATGGCATCCTCGACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS CAA 72 bp | GTGGCACACCTCCTGGTAACTGTATCGAATCTTCTGTaGCCAGTGACACACCTCCTGGTGACTGCATCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: VAHLLVTVSNLL*PVTHLLVTASY Trigger: ATAGGATGCAGTCACCAGGAGGTGTGTCACTGGCAACAGAAGATTCGATACAGTTACCAGGAGGTGTGCCAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS CAA 90 bp | CTCTACAGCGATGGACAACATCCTCTGAAGCTGACACACAATCAGTaGATTGGTGTTCTTGTTCTGGTTAGGCCGGGGAGACAGATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LYSDGQHPLKLTHNQ*IGVLVLVRPGRQMV Trigger: GACCATCTGTCTCCCCGGCCTAACCAGAACAAGAACACCAATCAACTGATTGTGTGTCAGCTTCAGAGGATGTTGTCCATCGCTGTAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS CAA 90 bp | TCAGGGATATCCAGCACAAACCCAAACATCATCTCCGCTATTTTATaGGAGCTGCAGGTTGGAGTCCTGTCCACCTCTACAGCGATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SGISSTNPNIISAIL*ELQVGVLSTSTAMD Trigger: GTCCATCGCTGTAGAGGTGGACAGGACTCCAACCTGCAGCTCCAATAAAATAGCGGAGATGATGTTTGGGTTTGTGCTGGATATCCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS GCA 72 bp | GACAGAACAGTGTTTGCAATGGATTGCTGTAGGTGCTaGCGCTGTCTCCTCAAGATCTGCTGGAAGTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: DRTVFAMDCCRC*RCLLKICWKSS Trigger: AGATGACTTCCAGCAGATCTTGAGGAGACAGCGGCAGCACCTACAGCAATCCATTGCAAACACTGTTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 ENSMUST00000159721.2 |
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| CDS GCA 72 bp | CATGACAGAACAGTGTTTGCAATGGATTGCTGTAGGTaGTGCCGCTGTCTCCTCAAGATCTGCTGGAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: HDRTVFAMDCCR*CRCLLKICWKS Trigger: TGACTTCCAGCAGATCTTGAGGAGACAGCGGCAGCACCTACAGCAATCCATTGCAAACACTGTTCTGTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 ENSMUST00000159721.2 |
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| CDS GCA 72 bp | CAAACCCAAACATCATCTCCGCTATTTTATTGGAGCTaGAGGTTGGAGTCCTGTCCACCTCTACAGCGATGG | + |
|
Preference number: 6 (lower is better) Translates to: QTQTSSPLFYWS*RLESCPPLQRW Trigger: CCATCGCTGTAGAGGTGGACAGGACTCCAACCTGCAGCTCCAATAAAATAGCGGAGATGATGTTTGGGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS GCA 72 bp | ACATCTCTTGATGTCTGTGTCACATATCCTGGTAACTaGATCACTTCTGGTGATGGCGGCACATCTCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSLDVCVTYPGN*ITSGDGGTSPS Trigger: GCTGGGAGATGTGCCGCCATCACCAGAAGTGATGCAGTTACCAGGATATGTGACACAGACATCAAGAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS CCA 72 bp | CCAGCACAAACCCAAACATCATCTCCGCTATTTTATTaGAGCTGCAGGTTGGAGTCCTGTCCACCTCTACAG | + |
|
Preference number: 6 (lower is better) Translates to: PAQTQTSSPLFY*SCRLESCPPLQ Trigger: CTGTAGAGGTGGACAGGACTCCAACCTGCAGCTCCAATAAAATAGCGGAGATGATGTTTGGGTTTGTGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS CAA 72 bp | CTCTTGATGTCGGTGACATACCTCCTGGTGATTGTATaGCATCTCCTGATGCTGATGGCACATGTCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLMSVTYLLVIV*HLLMLMAHVLL Trigger: CAGCAGGACATGTGCCATCAGCATCAGGAGATGCAATACAATCACCAGGAGGTATGTCACCGACATCAAGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS CAA 72 bp | CCAGTGACACACCTCCTGGTGACTGCATCCTATCTCTaGATGTCGGTGACATACCTCCTGGTGATTGTATTG | + |
|
Preference number: 6 (lower is better) Translates to: PVTHLLVTASYL*MSVTYLLVIVL Trigger: CAATACAATCACCAGGAGGTATGTCACCGACATCAAGAGATAGGATGCAGTCACCAGGAGGTGTGTCACTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS CAA 90 bp | GCACAAACCCAAACATCATCTCCGCTATTTTATTGGAGCTGCAGGTaGGAGTCCTGTCCACCTCTACAGCGATGGACAACATCCTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: AQTQTSSPLFYWSCR*ESCPPLQRWTTSSE Trigger: TTCAGAGGATGTTGTCCATCGCTGTAGAGGTGGACAGGACTCCAACCTGCAGCTCCAATAAAATAGCGGAGATGATGTTTGGGTTTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS CAA 90 bp | CTCCTGATGCTGATGGCACATGTCCTGCTGACTGCATCCTATCTCTaGATGACTGTGGCACACTGTTTAGTGACTGTATCACATCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLMLMAHVLLTASYL*MTVAHCLVTVSHLL Trigger: CAGGAGATGTGATACAGTCACTAAACAGTGTGCCACAGTCATCAAGAGATAGGATGCAGTCAGCAGGACATGTGCCATCAGCATCAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS CAA 72 bp | GATGGACAACATCCTCTGAAGCTGACACACAATCAGTaGATTGGTGTTCTTGTTCTGGTTAGGCCGGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: DGQHPLKLTHNQ*IGVLVLVRPGR Trigger: TCTCCCCGGCCTAACCAGAACAAGAACACCAATCAACTGATTGTGTGTCAGCTTCAGAGGATGTTGTCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS CAA 72 bp | CAAACATCATCTCCGCTATTTTATTGGAGCTGCAGGTaGGAGTCCTGTCCACCTCTACAGCGATGGACAACA | + |
|
Preference number: 6 (lower is better) Translates to: QTSSPLFYWSCR*ESCPPLQRWTT Trigger: TGTTGTCCATCGCTGTAGAGGTGGACAGGACTCCAACCTGCAGCTCCAATAAAATAGCGGAGATGATGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS CAA 72 bp | TCCAGCACAAACCCAAACATCATCTCCGCTATTTTATaGGAGCTGCAGGTTGGAGTCCTGTCCACCTCTACA | + |
|
Preference number: 6 (lower is better) Translates to: SSTNPNIISAIL*ELQVGVLSTST Trigger: TGTAGAGGTGGACAGGACTCCAACCTGCAGCTCCAATAAAATAGCGGAGATGATGTTTGGGTTTGTGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS GCA 72 bp | ATATCTCCAGATGATGGTGGCACACCTCCTGGTGACTaGATCCTATCTTTTGATGATAATGGCACACCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ISPDDGGTPPGD*ILSFDDNGTPP Trigger: AGGAGGTGTGCCATTATCATCAAAAGATAGGATGCAGTCACCAGGAGGTGTGCCACCATCATCTGGAGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS CCA 72 bp | AAACATCATCTCCGCTATTTTATTGGAGCTGCAGGTTaGAGTCCTGTCCACCTCTACAGCGATGGACAACAT | + |
|
Preference number: 6 (lower is better) Translates to: KHHLRYFIGAAG*SPVHLYSDGQH Trigger: ATGTTGTCCATCGCTGTAGAGGTGGACAGGACTCCAACCTGCAGCTCCAATAAAATAGCGGAGATGATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS CCA 72 bp | AGGAATATGATCTCCAGGACTTTGCATCGCAGAAGGTaGCTTTCCATGGTAGTAAAGAACATCTCCCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RNMISRTLHRRR*LSMVVKNISLW Trigger: CCAGAGGGAGATGTTCTTTACTACCATGGAAAGCCACCTTCTGCGATGCAAAGTCCTGGAGATCATATTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS CCA 72 bp | ACACTTCCTGATGACTGCATCACACTTCTTAGTGACTaGGTCACACTTCCTGGTGACTGCATCATACTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: TLPDDCITLLSD*VTLPGDCIILP Trigger: AGGAAGTATGATGCAGTCACCAGGAAGTGTGACCCAGTCACTAAGAAGTGTGATGCAGTCATCAGGAAGTGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS CAA 72 bp | ACTGTGTCACACCTGCCGGTGACTGAATCACATCTCTaGATGTCTGTGTCACATATCCTGGTAACTGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: TVSHLPVTESHL*MSVSHILVTAS Trigger: TGATGCAGTTACCAGGATATGTGACACAGACATCAAGAGATGTGATTCAGTCACCGGCAGGTGTGACACAGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS CAA 72 bp | CTGATGGCACATGTCCTGCTGACTGCATCCTATCTCTaGATGACTGTGGCACACTGTTTAGTGACTGTATCA | + |
|
Preference number: 6 (lower is better) Translates to: LMAHVLLTASYL*MTVAHCLVTVS Trigger: TGATACAGTCACTAAACAGTGTGCCACAGTCATCAAGAGATAGGATGCAGTCAGCAGGACATGTGCCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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| CDS CAA 90 bp | TGCTTCTCCACATCCAGCACCGTGATGTCATCTCCTTGTTGGGGCTaGGGCTTAATTCTTTTGATGATTAAGTCTTTCCGATCAATCACT | + |
|
Preference number: 6 (lower is better) Translates to: CFSTSSTVMSSPCWG*GLILLMIKSFRSIT Trigger: AGTGATTGATCGGAAAGACTTAATCATCAAAAGAATTAAGCCCAAGCCCCAACAAGGAGATGACATCACGGTGCTGGATGTGGAGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118072.8 ENSMUST00000121401.8 |
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| CDS CAA 72 bp | TGTCTCTTGCTAAGTCCAATAATGCTTGTGGTGAGTTaGACACATCTCCTGATAAGTTTGGTGTATCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: CLLLSPIMLVVS*THLLISLVYLQ Trigger: TTGGAGATACACCAAACTTATCAGGAGATGTGTCAAACTCACCACAAGCATTATTGGACTTAGCAAGAGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121401.8 |
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