Pregenerated sensors for SIM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019913Ensembl transcript IDs: ENSMUST00000020071.4, ENSMUST00000219436.2
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATACTAGCTGCCAAAATGTTGTCTACTTCCACCTTCAAAGTGGCTTaGAGATTTAGTGTCACTCTACTCTGCTCTGCCCTTTCCTTCACT | + |
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Preference number: 1 (lower is better) Translates to: ILAAKMLSTSTFKVA*RFSVTLLCSALSFT Trigger: AGTGAAGGAAAGGGCAGAGCAGAGTAGAGTGACACTAAATCTCCAAGCCACTTTGAAGGTGGAAGTAGACAACATTTTGGCAGCTAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR GCA 90 bp | CATAAATTTCTAGCACCTACATTTGGCTGCATCTTAAGAGAAAGTTaGGTGCAACTCTTCCTGCCTGAAAGAGCCCAGACCTTACTTAAA | + |
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Preference number: 1 (lower is better) Translates to: HKFLAPTFGCILRES*VQLFLPERAQTLLK Trigger: TTTAAGTAAGGTCTGGGCTCTTTCAGGCAGGAAGAGTTGCACGCAACTTTCTCTTAAGATGCAGCCAAATGTAGGTGCTAGAAATTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR TCA 90 bp | TCTTGGCAATCAATCAGGAAAAGTAGGCATTTGTATGTTTATGCATaGGAAGTGTACATAGCAGCTTATGAGCAGCATGTGATCTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: SWQSIRKSRHLYVYA*EVYIAAYEQHVICV Trigger: CACACAGATCACATGCTGCTCATAAGCTGCTATGTACACTTCTCATGCATAAACATACAAATGCCTACTTTTCCTGATTGATTGCCAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR TCA 90 bp | TTGGCACACAGTTCACTTGACTTTCTACTGTGCCACATGGACATATaGGCAAGTGTGTTGTTGTTTTCTTTGTTTACAAACAGCAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: LAHSSLDFLLCHMDI*ASVLLFSLFTNSKE Trigger: TTCTTTGCTGTTTGTAAACAAAGAAAACAACAACACACTTGCTCATATGTCCATGTGGCACAGTAGAAAGTCAAGTGAACTGTGTGCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR GCA 90 bp | CTCCCAACATATCAGTGGTATGATTTAGAAAATTCCTTACTGTTGTaGCAATGCAATCCTGGTCTATGTCTAACTCAAAAGCAAGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: LPTYQWYDLENSLLL*QCNPGLCLTQKQVE Trigger: TTCCACTTGCTTTTGAGTTAGACATAGACCAGGATTGCATTGGCACAACAGTAAGGAATTTTCTAAATCATACCACTGATATGTTGGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR TCA 90 bp | ACATTCAAATTTTTAAACAAAGTTTACTATATCACAGTGATAAGATaGGTGGTTCCCAGTCAAGTACTCAGTTCTCACTCTGTCACTCTC | + |
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Preference number: 1 (lower is better) Translates to: TFKFLNKVYYITVIR*VVPSQVLSSHSVTL Trigger: GAGAGTGACAGAGTGAGAACTGAGTACTTGACTGGGAACCACTCATCTTATCACTGTGATATAGTAAACTTTGTTTAAAAATTTGAATGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR TCA 90 bp | ACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTGAACCACGTGTCCACCTGCCTGTACATAGCAGCTTATaGGCAGCATGTGATCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TLSLWLPQALFEPRVHLPVHSSL*AACDLC Trigger: ACACAGATCACATGCTGCTCATAAGCTGCTATGTAC...AGGCAGGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR TCA 90 bp | AATCCACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTGAACCACGTGTCCACCTTGTATGTTTATGCATaGGAAGTGTACATAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: NPHFPCGFPKHSLNHVSTLYVYA*EVYIAA Trigger: AGCTGCTATGTACACTTCTCATGCATAAACATACAA...GGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGTGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR TCA 90 bp | CTATATTCCTCACTGATTTGCATGCTTCTCCATTTTCATTGGCGATGTTGTTCTTCCCCAAGCACTCTTTaGACCACGTGTCCACCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LYSSLICMLLHFHWRCCSSPSTL*TTCPPA Trigger: GGCAGGTGGACACGTGGTTCAAAGAGTGCTTGGGGA...AGAACAACATCGCCAATGAAAATGGAGAAGCATGCAAATCAGTGAGGAATATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR GCA 90 bp | ACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTGAACCACGTGTCCACCTGCCTGCATTTGTATGTTTATaGATGAGAAGTGTACATAGC | + |
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Preference number: 2 (lower is better) Translates to: TLSLWLPQALFEPRVHLPAFVCL*MRSVHS Trigger: GCTATGTACACTTCTCATGCATAAACATACAAATGC...AGGCAGGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR CCA 90 bp | GCTAGCCAACAGATTTTTACCTACAGTGAAATCCTTATCCACACAATCCTGGCCACCTCTGCTTGTGAATaGAAAATCCAGAAACACCAG | + |
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Preference number: 2 (lower is better) Translates to: ASQQIFTYSEILIHTILATSACE*KIQKHQ Trigger: CTGGTGTTTCTGGATTTTCCATTCACAAGCAGAGGT...GGCCAGGATTGTGTGGATAAGGATTTCACTGTAGGTAAAAATCTGTTGGCTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAGATAGAATGGGCTTCATAGAGAATAAGGAATTGTGTGTGTTCTTCTTAAGGCTTTCCATATCCTaGCACACTGGCCTATCGTGC | + |
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Preference number: 2 (lower is better) Translates to: FPDRMGFIENKELCVFFLRLSIS*HTGLSC Trigger: GCACGATAGGCCAGTGTGTCAGGATATGGAAAGCCT...TAAGAAGAACACACACAATTCCTTATTCTCTATGAAGCCCATTCTATCTGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR GCA 90 bp | GTGCCACATGGACATATGAGCAAGTGTGTTGTTGTTTTCTTTGTTTACAAACAGAACCACGTGTCCACCTaGCTCAGCTTTTGTCTTAGA | + |
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Preference number: 2 (lower is better) Translates to: VPHGHMSKCVVVFFVYKQNHVST*LSFCLR Trigger: TCTAAGACAAAAGCTGAGGCAGGTGGACACGTGGTT...CTGTTTGTAAACAAAGAAAACAACAACACACTTGCTCATATGTCCATGTGGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR CCA 90 bp | GCTAGCCAACAGATTTTTACCTACAGTGAAATCCTTATCCACACAATCCTGGCCACCTTCAAAGTGGCTTaGAGATTTAGTGTCACTCTA | + |
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Preference number: 2 (lower is better) Translates to: ASQQIFTYSEILIHTILATFKVA*RFSVTL Trigger: TAGAGTGACACTAAATCTCCAAGCCACTTTGAAGGT...GGCCAGGATTGTGTGGATAAGGATTTCACTGTAGGTAAAAATCTGTTGGCTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR CCA 90 bp | TGGGAACACTCTAGCCCTATAAAGTATAACCAGGAAATAATAAGTGGTTTTCTGTCCACACTTTCCCTGTaGCTTCCCCAAGCACTCTTT | + |
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Preference number: 2 (lower is better) Translates to: WEHSSPIKYNQEIISGFLSTLSL*LPQALF Trigger: AAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGTGGA...CAGAAAACCACTTATTATTTCCTGGTTATACTTTATAGGGCTAGAGTGTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR CAA 90 bp | CAACTCTCAACTTACTGTCATATAGATGGCCACCAAATGATCATGTaGAGTGATGAAAATACAGTACTAATCCCTGAGTGTCCAATGCCA | + |
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Preference number: 2 (lower is better) Translates to: QLSTYCHIDGHQMIM*SDENTVLIPECPMP Trigger: TGGCATTGGACACTCAGGGATTAGTACTGTATTTTCATCACTCAACATGATCATTTGGTGGCCATCTATATGACAGTAAGTTGAGAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR TCA 90 bp | AGTTTAATTCTGCACCCACTTAAAACGAACATCAAAACTGGAATTAAGCAGAGAGCTCAATCATTTCCCTaGGCAGCAAGAAAAACAGCC | + |
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Preference number: 2 (lower is better) Translates to: SLILHPLKTNIKTGIKQRAQSFP*AARKTA Trigger: GGCTGTTTTTCTTGCTGCTCAGGGAAATGATTGAGC...TCTCTGCTTAATTCCAGTTTTGATGTTCGTTTTAAGTGGGTGCAGAATTAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219436.2 |
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| 3UTR-3UTR CCA 90 bp | GCTAGCCAACAGATTTTTACCTACAGTGAAATCCTTATCCACACAATCCTGGCCCTCCCAACATATCAGTaGTATGATTTAGAAAATTCC | + |
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Preference number: 2 (lower is better) Translates to: ASQQIFTYSEILIHTILALPTYQ*YDLENS Trigger: GGAATTTTCTAAATCATACCACTGATATGTTGGGAG...GGCCAGGATTGTGTGGATAAGGATTTCACTGTAGGTAAAAATCTGTTGGCTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR GCA 90 bp | GTGCCACATGGACATATGAGCAAGTGTGTTGTTGTTTTCTTTGTTTACAAACAGAATTCCTTACTGTTGTaGCAATGCAATCCTGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: VPHGHMSKCVVVFFVYKQNSLLL*QCNPGL Trigger: TAGACCAGGATTGCATTGGCACAACAGTAAGGAATT...CTGTTTGTAAACAAAGAAAACAACAACACACTTGCTCATATGTCCATGTGGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR GCA 90 bp | AGTTTAATTCTGCACCCACTTAAAACGAACATCAAAACTGGAATTAAGCAGAGATTCCGAATGACAAAATaGCCCTGGCCAAATCTACAG | + |
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Preference number: 2 (lower is better) Translates to: SLILHPLKTNIKTGIKQRFRMTK*PWPNLQ Trigger: CTGTAGATTTGGCCAGGGGCATTTTGTCATTCGGAA...TCTCTGCTTAATTCCAGTTTTGATGTTCGTTTTAAGTGGGTGCAGAATTAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219436.2 |
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| 3UTR CAA 90 bp | TATCTCCCAACATATCAGTGGTATGATTTAGAAAATTCCTTACTGTaGTGCCAATGCAATCCTGGTCTATGTCTAACTCAAAAGCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: YLPTYQWYDLENSLL*CQCNPGLCLTQKQV Trigger: CACTTGCTTTTGAGTTAGACATAGACCAGGATTGCATTGGCACAACAGTAAGGAATTTTCTAAATCATACCACTGATATGTTGGGAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR TCA 90 bp | AAAATGTTGTCTACTTCCACCTTCAAAGTGGCTTGGAGATTTAGTGTCACTCTAGTGCTATGTTTTCTTTaGTTTCACAGGAACTCATCA | + |
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Preference number: 2 (lower is better) Translates to: KMLSTSTFKVAWRFSVTLVLCFL*FHRNSS Trigger: TGATGAGTTCCTGTGAAATCAAAGAAAACATAGCAC...TAGAGTGACACTAAATCTCCAAGCCACTTTGAAGGTGGAAGTAGACAACATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR CCA 90 bp | TGGGAACACTCTAGCCCTATAAAGTATAACCAGGAAATAATAAGTGGTTTTCTGATCAGCCCTTCCATGTaGTATACATGCTTAATTTGC | + |
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Preference number: 2 (lower is better) Translates to: WEHSSPIKYNQEIISGFLISPSM*YTCLIC Trigger: GCAAATTAAGCATGTATACCACATGGAAGGGCTGAT...CAGAAAACCACTTATTATTTCCTGGTTATACTTTATAGGGCTAGAGTGTTCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR TCA 90 bp | TCTATTTATGATATACTTGCATGTATCCACAGCTGTTCTGACACCCACTTAAAACTTATGAGCAGCATGTaGTCTGTGTGTATAAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: SIYDILACIHSCSDTHLKLMSSM*SVCISS Trigger: AGAACTTATACACACAGATCACATGCTGCTCATAAG...TTTTAAGTGGGTGTCAGAACAGCTGTGGATACATGCAAGTATATCATAAATAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR GCA 90 bp | TCTATTTATGATATACTTGCATGTATCCACAGCTGTTCTGACACCCACTTAAAATTACTGTTGTGCCAATaGAATCCTGGTCTATGTCTA | + |
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Preference number: 2 (lower is better) Translates to: SIYDILACIHSCSDTHLKLLLCQ*NPGLCL Trigger: TAGACATAGACCAGGATTGCATTGGCACAACAGTAA...TTTTAAGTGGGTGTCAGAACAGCTGTGGATACATGCAAGTATATCATAAATAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR GCA 90 bp | TCTATTTATGATATACTTGCATGTATCCACAGCTGTTCTGACACCCACTTAAAATATTCCTCACTGATTTaGATGCTTCTCCATTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: SIYDILACIHSCSDTHLKYSSLI*MLLHFH Trigger: ATGAAAATGGAGAAGCATGCAAATCAGTGAGGAATA...TTTTAAGTGGGTGTCAGAACAGCTGTGGATACATGCAAGTATATCATAAATAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR TCA 72 bp | ATCCACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTaGACCACGTGTCCACCTGCCTCAGCTTTTGTCTTA | + |
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Preference number: 3 (lower is better) Translates to: IHTFPVASPSTL*TTCPPASAFVL Trigger: TAAGACAAAAGCTGAGGCAGGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR CAA 90 bp | ACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTGAACCACGTGTCCACCTGCCTGAAAATTCCTTACTGTaGTGCCAATGCAATCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: TLSLWLPQALFEPRVHLPENSLL*CQCNPG Trigger: ACCAGGATTGCATTGGCACAACAGTAAGGAATTTTC...AGGCAGGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR CAA 90 bp | ACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTGAACCACGTGTCCACCTGCCTCTAGCTGCCAAAATGTaGTCTACTTCCACCTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: TLSLWLPQALFEPRVHLPLAAKM*STSTFK Trigger: TTTGAAGGTGGAAGTAGACAACATTTTGGCAGCTAG...AGGCAGGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR GCA 72 bp | CTAGCACCTACATTTGGCTGCATCTTAAGAGAAAGTTaGGTGCAACTCTTCCTGCCTGAAAGAGCCCAGACC | + |
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Preference number: 3 (lower is better) Translates to: LAPTFGCILRES*VQLFLPERAQT Trigger: GGTCTGGGCTCTTTCAGGCAGGAAGAGTTGCACGCAACTTTCTCTTAAGATGCAGCCAAATGTAGGTGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR CAA 90 bp | AATCCACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTGAACCACGTGTCCACCATGATGAAGAAGGAATaGGTTTACAAGATACATCCC | + |
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Preference number: 3 (lower is better) Translates to: NPHFPCGFPKHSLNHVSTMMKKE*VYKIHP Trigger: GGGATGTATCTTGTAAACCAATTCCTTCTTCATCAT...GGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGTGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR TCA 72 bp | CGAGGTCAGAATAGAGACCTTGGCACACAGTTCACTTaGCTTTCTACTGTGCCACATGGACATATGAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: RGQNRDLGTQFT*LSTVPHGHMSK Trigger: CTTGCTCATATGTCCATGTGGCACAGTAGAAAGTCAAGTGAACTGTGTGCCAAGGTCTCTATTCTGACCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR CCA 72 bp | GCCAAAATGTTGTCTACTTCCACCTTCAAAGTGGCTTaGAGATTTAGTGTCACTCTACTCTGCTCTGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: AKMLSTSTFKVA*RFSVTLLCSAL Trigger: AAGGGCAGAGCAGAGTAGAGTGACACTAAATCTCCAAGCCACTTTGAAGGTGGAAGTAGACAACATTTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR CAA 90 bp | GCTAGCCAACAGATTTTTACCTACAGTGAAATCCTTATCCACACAATCCTGGCCTGTAGTACCATAGTTTaGCAGTTCTGTCATAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: ASQQIFTYSEILIHTILACSTIV*QFCHSV Trigger: GACACTATGACAGAACTGCAAAACTATGGTACTACA...GGCCAGGATTGTGTGGATAAGGATTTCACTGTAGGTAAAAATCTGTTGGCTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR CCA 72 bp | TGGCACACAGTTCACTTGACTTTCTACTGTGCCACATaGACATATGAGCAAGTGTGTTGTTGTTTTCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: WHTVHLTFYCAT*TYEQVCCCFLC Trigger: ACAAAGAAAACAACAACACACTTGCTCATATGTCCATGTGGCACAGTAGAAAGTCAAGTGAACTGTGTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR CAA 90 bp | CTATATTCCTCACTGATTTGCATGCTTCTCCATTTTCATTGGCGATGTTGTTCTGGTGCTATGTTTTCTTaGATTTCACAGGAACTCATC | + |
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Preference number: 3 (lower is better) Translates to: LYSSLICMLLHFHWRCCSGAMFS*ISQELI Trigger: GATGAGTTCCTGTGAAATCAAAGAAAACATAGCACC...AGAACAACATCGCCAATGAAAATGGAGAAGCATGCAAATCAGTGAGGAATATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR TCA 72 bp | TCAATCAGGAAAAGTAGGCATTTGTATGTTTATGCATaGGAAGTGTACATAGCAGCTTATGAGCAGCATGTG | + |
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Preference number: 3 (lower is better) Translates to: SIRKSRHLYVYA*EVYIAAYEQHV Trigger: CACATGCTGCTCATAAGCTGCTATGTACACTTCTCATGCATAAACATACAAATGCCTACTTTTCCTGATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR CAA 90 bp | CTATATTCCTCACTGATTTGCATGCTTCTCCATTTTCATTGGCGATGTTGTTCTCTTTTCAGATCTTCTTaGGTTACTTGTGTACTTACC | + |
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Preference number: 3 (lower is better) Translates to: LYSSLICMLLHFHWRCCSLFRSS*VTCVLT Trigger: GGTAAGTACACAAGTAACCAAAGAAGATCTGAAAAG...AGAACAACATCGCCAATGAAAATGGAGAAGCATGCAAATCAGTGAGGAATATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR-3UTR CAA 90 bp | TGGGAACACTCTAGCCCTATAAAGTATAACCAGGAAATAATAAGTGGTTTTCTGGCTTCTCCATTTTCATaGGCGATGTTGTTCTGTTAT | + |
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Preference number: 3 (lower is better) Translates to: WEHSSPIKYNQEIISGFLASPFS*AMLFCY Trigger: ATAACAGAACAACATCGCCAATGAAAATGGAGAAGC...CAGAAAACCACTTATTATTTCCTGGTTATACTTTATAGGGCTAGAGTGTTCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR TCA 72 bp | AGTTCACTTGACTTTCTACTGTGCCACATGGACATATaGGCAAGTGTGTTGTTGTTTTCTTTGTTTACAAAC | + |
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Preference number: 3 (lower is better) Translates to: SSLDFLLCHMDI*ASVLLFSLFTN Trigger: GTTTGTAAACAAAGAAAACAACAACACACTTGCTCATATGTCCATGTGGCACAGTAGAAAGTCAAGTGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR GCA 72 bp | TGGTATGATTTAGAAAATTCCTTACTGTTGTGCCAATaGAATCCTGGTCTATGTCTAACTCAAAAGCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: WYDLENSLLLCQ*NPGLCLTQKQV Trigger: CACTTGCTTTTGAGTTAGACATAGACCAGGATTGCATTGGCACAACAGTAAGGAATTTTCTAAATCATACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| 3UTR GCA 72 bp | TATCAGTGGTATGATTTAGAAAATTCCTTACTGTTGTaGCAATGCAATCCTGGTCTATGTCTAACTCAAAAG | + |
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Preference number: 3 (lower is better) Translates to: YQWYDLENSLLL*QCNPGLCLTQK Trigger: CTTTTGAGTTAGACATAGACCAGGATTGCATTGGCACAACAGTAAGGAATTTTCTAAATCATACCACTGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS-3UTR CCA 90 bp | ACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTGAACCACGTGTCCACCTGCCTTGGGTCCAGGAGCTGTaGGGAGGCAGTATCAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: TLSLWLPQALFEPRVHLPWVQEL*GGSISQ Trigger: CTGACTGATACTGCCTCCCCACAGCTCCTGGACCCA...AGGCAGGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS-3UTR CCA 90 bp | ACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTGAACCACGTGTCCACCTGCCTGGTCACCAGATTCACTaGCTGACCCAGGGTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: TLSLWLPQALFEPRVHLPGHQIH*LTQGLE Trigger: CTCCAGACCCTGGGTCAGCCAGTGAATCTGGTGACC...AGGCAGGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS-3UTR GCA 90 bp | AATCCACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTGAACCACGTGTCCACCTCTCCCAGTAGGTGGTaGTCCCAGGAAGTACCTGCC | + |
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Preference number: 4 (lower is better) Translates to: NPHFPCGFPKHSLNHVSTSPSRW*SQEVPA Trigger: GGCAGGTACTTCCTGGGAGCACCACCTACTGGGAGA...GGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGTGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS-3UTR TCA 90 bp | GCTAGCCAACAGATTTTTACCTACAGTGAAATCCTTATCCACACAATCCTGGCCCTCGGAGGCAGGGAGTaGCCCACAGCCACCAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: ASQQIFTYSEILIHTILALGGRE*PTATKP Trigger: GGGCTTGGTGGCTGTGGGTCACTCCCTGCCTCCGAG...GGCCAGGATTGTGTGGATAAGGATTTCACTGTAGGTAAAAATCTGTTGGCTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS-3UTR CCA 90 bp | ACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTGAACCACGTGTCCACCTGCCTGCTGTCATCTCATCGTaGTCAGCCGGGTGGATATAT | + |
|
Preference number: 4 (lower is better) Translates to: TLSLWLPQALFEPRVHLPAVISS*SAGWIY Trigger: ATATATCCACCCGGCTGACCACGATGAGATGACAGC...AGGCAGGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | AATCCACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTGAACCACGTGTCCACCTGTCCTCCACCAGCCTaGAATGGTCCAGAGCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NPHFPCGFPKHSLNHVSTCPPPA*NGPEQN Trigger: GTTTTGCTCTGGACCATTCCAGGCTGGTGGAGGACA...GGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGTGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | GCTAGCCAACAGATTTTTACCTACAGTGAAATCCTTATCCACACAATCCTGGCCCAGGAAGTACCTGCCTaGCTCGCACCGTCCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASQQIFTYSEILIHTILAQEVPA*LAPSSL Trigger: GAGGGAGGACGGTGCGAGGCAGGCAGGTACTTCCTG...GGCCAGGATTGTGTGGATAAGGATTTCACTGTAGGTAAAAATCTGTTGGCTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | GCTAGCCAACAGATTTTTACCTACAGTGAAATCCTTATCCACACAATCCTGGCCCTCCCAGGAAGTACCTaGCTGCCTCGCACCGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASQQIFTYSEILIHTILALPGST*LPRTVL Trigger: GAGGACGGTGCGAGGCAGGCAGGTACTTCCTGGGAG...GGCCAGGATTGTGTGGATAAGGATTTCACTGTAGGTAAAAATCTGTTGGCTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | AATCCACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTGAACCACGTGTCCACCCATGATCTTCCCATCTaGGGCCACCACGAAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: NPHFPCGFPKHSLNHVSTHDLPI*GHHEDE Trigger: TTCATCTTCGTGGTGGCCCCAGATGGGAAGATCATG...GGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGTGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | AATCCACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTGAACCACGTGTCCACCTTCACCAACAGTAAGTaGTGTGCACAGCGTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NPHFPCGFPKHSLNHVSTFTNSK*CAQRRW Trigger: CCACCTACGCTGTGCACACCACTTACTGTTGGTGAA...GGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGTGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| 3UTR CAA 72 bp | AATCCACACTTTCCCTGTGGCTTCCCCAAGCACTCTTaGAACCACGTGTCCACCTGCCTCAGCTTTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NPHFPCGFPKHS*NHVSTCLSFCL Trigger: AAGACAAAAGCTGAGGCAGGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGTGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR TCA 90 bp | GCTAGCCAACAGATTTTTACCTACAGTGAAATCCTTATCCACACAATCCTGGCCGGGCCACCACGAAGATaGAGCCATCCAGAGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASQQIFTYSEILIHTILAGPPRR*SHPESG Trigger: TCCAGACTCTGGATGGCTTCATCTTCGTGGTGGCCC...GGCCAGGATTGTGTGGATAAGGATTTCACTGTAGGTAAAAATCTGTTGGCTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR TCA 90 bp | GCTAGCCAACAGATTTTTACCTACAGTGAAATCCTTATCCACACAATCCTGGCCAGGGCTGATGGGCTGTaGGCACGGCTGTCATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASQQIFTYSEILIHTILARADGL*ARLSSH Trigger: ATGAGATGACAGCCGTGCTCACAGCCCATCAGCCCT...GGCCAGGATTGTGTGGATAAGGATTTCACTGTAGGTAAAAATCTGTTGGCTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR TCA 90 bp | GCTAGCCAACAGATTTTTACCTACAGTGAAATCCTTATCCACACAATCCTGGCCACCAGATTCACTGGCTaGCCCAGGGTCTGGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASQQIFTYSEILIHTILATRFTG*PRVWRA Trigger: AGCTCTCCAGACCCTGGGTCAGCCAGTGAATCTGGT...GGCCAGGATTGTGTGGATAAGGATTTCACTGTAGGTAAAAATCTGTTGGCTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | AATCCACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTGAACCACGTGTCCACCTTTGATACTGTTCGGTaGGGTATCGGTCACCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: NPHFPCGFPKHSLNHVSTFDTVR*GIGHQI Trigger: AATCTGGTGACCGATACCGCACCGAACAGTATCAAA...GGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGTGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | GTGCCACATGGACATATGAGCAAGTGTGTTGTTGTTTTCTTTGTTTACAAACAGCTGGTTCGACTGGTGTaGCCCCACGCCTCGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPHGHMSKCVVVFFVYKQLVRLV*PHASPS Trigger: GCTTGGCGAGGCGTGGGGCCACACCAGTCGAACCAG...CTGTTTGTAAACAAAGAAAACAACAACACACTTGCTCATATGTCCATGTGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR TCA 90 bp | GCTAGCCAACAGATTTTTACCTACAGTGAAATCCTTATCCACACAATCCTGGCCCAGGGTCTGGAGAGCTaGCCACACTATCTTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASQQIFTYSEILIHTILAQGLES*PHYLHP Trigger: GGGATGAAGATAGTGTGGTCAGCTCTCCAGACCCTG...GGCCAGGATTGTGTGGATAAGGATTTCACTGTAGGTAAAAATCTGTTGGCTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | TGGGAACACTCTAGCCCTATAAAGTATAACCAGGAAATAATAAGTGGTTTTCTGACGCTGACGATGCAGTaGGGCCTGGAGGAGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WEHSSPIKYNQEIISGFLTLTMQ*GLEERL Trigger: CAGCCGCTCCTCCAGGCCGCACTGCATCGTCAGCGT...CAGAAAACCACTTATTATTTCCTGGTTATACTTTATAGGGCTAGAGTGTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | TCTATTTATGATATACTTGCATGTATCCACAGCTGTTCTGACACCCACTTAAAAAGGGGCTGGTTCGACTaGTGTGGCCCCACGCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SIYDILACIHSCSDTHLKRGWFD*CGPTPR Trigger: GCGAGGCGTGGGGCCACACCAGTCGAACCAGCCCCT...TTTTAAGTGGGTGTCAGAACAGCTGTGGATACATGCAAGTATATCATAAATAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | CTATATTCCTCACTGATTTGCATGCTTCTCCATTTTCATTGGCGATGTTGTTCTCCTCCCTCGCAGGCTTaGGTGTGGAAGTGCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYSSLICMLLHFHWRCCSPPSQA*VWKCLS Trigger: GGACAGGCACTTCCACACCCAAGCCTGCGAGGGAGG...AGAACAACATCGCCAATGAAAATGGAGAAGCATGCAAATCAGTGAGGAATATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | CTATATTCCTCACTGATTTGCATGCTTCTCCATTTTCATTGGCGATGTTGTTCTGCTTGGGTGTGGAAGTaGCTGTCCTCCACCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LYSSLICMLLHFHWRCCSAWVWK*LSSTSL Trigger: CAGGCTGGTGGAGGACAGGCACTTCCACACCCAAGC...AGAACAACATCGCCAATGAAAATGGAGAAGCATGCAAATCAGTGAGGAATATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | AAAATGTTGTCTACTTCCACCTTCAAAGTGGCTTGGAGATTTAGTGTCACTCTAGGTAAGAGGCAAAGCTaGTCGAGAGCCCCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KMLSTSTFKVAWRFSVTLGKRQS*SRAPPG Trigger: CCCTGGTGGGGCTCTCGAGCAGCTTTGCCTCTTACC...TAGAGTGACACTAAATCTCCAAGCCACTTTGAAGGTGGAAGTAGACAACATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS-3UTR CCA 90 bp | GTGCCACATGGACATATGAGCAAGTGTGTTGTTGTTTTCTTTGTTTACAAACAGCGATGCAGTGCGGCCTaGAGGAGCGGCTGTTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VPHGHMSKCVVVFFVYKQRCSAA*RSGCCV Trigger: TACACAACAGCCGCTCCTCCAGGCCGCACTGCATCG...CTGTTTGTAAACAAAGAAAACAACAACACACTTGCTCATATGTCCATGTGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | AAAATGTTGTCTACTTCCACCTTCAAAGTGGCTTGGAGATTTAGTGTCACTCTATCGCAGGCTTGGGTGTaGAAGTGCCTGTCCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KMLSTSTFKVAWRFSVTLSQAWV*KCLSST Trigger: GGTGGAGGACAGGCACTTCCACACCCAAGCCTGCGA...TAGAGTGACACTAAATCTCCAAGCCACTTTGAAGGTGGAAGTAGACAACATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | CTATATTCCTCACTGATTTGCATGCTTCTCCATTTTCATTGGCGATGTTGTTCTGGCAGACCTCACCTGTaGGTGGGGGCTGTTGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: LYSSLICMLLHFHWRCCSGRPHL*VGAVDS Trigger: ACTATCAACAGCCCCCACCCACAGGTGAGGTCTGCC...AGAACAACATCGCCAATGAAAATGGAGAAGCATGCAAATCAGTGAGGAATATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | GCTAGCCAACAGATTTTTACCTACAGTGAAATCCTTATCCACACAATCCTGGCCTCCGAGACAGTGCAGTaGGGCTGTTGTCATAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASQQIFTYSEILIHTILASETVQ*GCCHSH Trigger: ATGACTATGACAACAGCCCCACTGCACTGTCTCGGA...GGCCAGGATTGTGTGGATAAGGATTTCACTGTAGGTAAAAATCTGTTGGCTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | GCTAGCCAACAGATTTTTACCTACAGTGAAATCCTTATCCACACAATCCTGGCCACTTATCCGAGACAGTaGAGTGGGGCTGTTGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: ASQQIFTYSEILIHTILATYPRQ*SGAVVI Trigger: TATGACAACAGCCCCACTGCACTGTCTCGGATAAGT...GGCCAGGATTGTGTGGATAAGGATTTCACTGTAGGTAAAAATCTGTTGGCTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | GTGCCACATGGACATATGAGCAAGTGTGTTGTTGTTTTCTTTGTTTACAAACAGGGCAGGATGGTCTCCTaGTGTCTGATGGGGAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: VPHGHMSKCVVVFFVYKQGRMVS*CLMGRH Trigger: ATGTCTCCCCATCAGACAGCAGGAGACCATCCTGCC...CTGTTTGTAAACAAAGAAAACAACAACACACTTGCTCATATGTCCATGTGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | TACCTGTGTATAACCTTGAATGTCGGTGCTATGTTTTCTTTGATTTCACAGGAAGCAAGAGCAGAGCTGTaGCAGACCTCACCTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YLCITLNVGAMFSLISQEARAEL*QTSPVG Trigger: ACCCACAGGTGAGGTCTGCCACAGCTCTGCTCTTGC...TTCCTGTGAAATCAAAGAAAACATAGCACCGACATTCAAGGTTATACACAGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS-3UTR CCA 90 bp | GTGCCACATGGACATATGAGCAAGTGTGTTGTTGTTTTCTTTGTTTACAAACAGCACATGGTGAAGTGCTaGCAAGAGCAGAGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPHGHMSKCVVVFFVYKQHMVKC*QEQSCG Trigger: GCCACAGCTCTGCTCTTGCCAGCACTTCACCATGTG...CTGTTTGTAAACAAAGAAAACAACAACACACTTGCTCATATGTCCATGTGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR TCA 90 bp | TGGGAACACTCTAGCCCTATAAAGTATAACCAGGAAATAATAAGTGGTTTTCTGTGTCCAGTTGGGAGGTaGTGGCTGAGGGTAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WEHSSPIKYNQEIISGFLCPVGR*WLRVKA Trigger: TGCCTTTACCCTCAGCCATCACCTCCCAACTGGACA...CAGAAAACCACTTATTATTTCCTGGTTATACTTTATAGGGCTAGAGTGTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | TCTATTTATGATATACTTGCATGTATCCACAGCTGTTCTGACACCCACTTAAAATCTCATAGGCTTCTCTaGTCTCCGGGGAGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIYDILACIHSCSDTHLKSHRLL*SPGRPW Trigger: CCAAGGCCTCCCCGGAGAGCAGAGAAGCCTATGAGA...TTTTAAGTGGGTGTCAGAACAGCTGTGGATACATGCAAGTATATCATAAATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS-3UTR CCA 90 bp | AAAATGTTGTCTACTTCCACCTTCAAAGTGGCTTGGAGATTTAGTGTCACTCTACCCCACTGGCTGTCATaGTCAGATTCCGATCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KMLSTSTFKVAWRFSVTLPHWLS*SDSDLS Trigger: TGAGAGATCGGAATCTGACCATGACAGCCAGTGGGG...TAGAGTGACACTAAATCTCCAAGCCACTTTGAAGGTGGAAGTAGACAACATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS-3UTR TCA 90 bp | AGTTTAATTCTGCACCCACTTAAAACGAACATCAAAACTGGAATTAAGCAGAGATGTCCAGTTGGGAGGTaGTGGCTGAGGGTAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLILHPLKTNIKTGIKQRCPVGR*WLRVKA Trigger: TGCCTTTACCCTCAGCCATCACCTCCCAACTGGACA...TCTCTGCTTAATTCCAGTTTTGATGTTCGTTTTAAGTGGGTGCAGAATTAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219436.2 |
||
| CDS-3UTR TCA 90 bp | TACCTGTGTATAACCTTGAATGTCGGTGCTATGTTTTCTTTGATTTCACAGGAATCACAGCCATGCACGTaGTGGTACAGGGTCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLCITLNVGAMFSLISQESQPCT*WYRVFS Trigger: TGAGAAGACCCTGTACCATCACGTGCATGGCTGTGA...TTCCTGTGAAATCAAAGAAAACATAGCACCGACATTCAAGGTTATACACAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS-3UTR GCA 90 bp | TACCTGTGTATAACCTTGAATGTCGGTGCTATGTTTTCTTTGATTTCACAGGAAATATCCAGTCAGCTCTaGCACCCTGGAGTCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YLCITLNVGAMFSLISQEISSQL*HPGVQE Trigger: TTCCTGGACTCCAGGGTGGCAGAGCTGACTGGATAT...TTCCTGTGAAATCAAAGAAAACATAGCACCGACATTCAAGGTTATACACAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | AAAATGTTGTCTACTTCCACCTTCAAAGTGGCTTGGAGATTTAGTGTCACTCTATGGGAGTGGAACTGCTaGTATAGGAGAAAGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KMLSTSTFKVAWRFSVTLWEWNC*YRRKWA Trigger: AGCCCACTTTCTCCTATACCAGCAGTTCCACTCCCA...TAGAGTGACACTAAATCTCCAAGCCACTTTGAAGGTGGAAGTAGACAACATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | GTGCCACATGGACATATGAGCAAGTGTGTTGTTGTTTTCTTTGTTTACAAACAGAACAGTTTGGAGAGATaGCAGGATGGTCTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPHGHMSKCVVVFFVYKQNSLER*QDGLLL Trigger: CAGCAGGAGACCATCCTGCCATCTCTCCAAACTGTT...CTGTTTGTAAACAAAGAAAACAACAACACACTTGCTCATATGTCCATGTGGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR TCA 90 bp | AAAATGTTGTCTACTTCCACCTTCAAAGTGGCTTGGAGATTTAGTGTCACTCTAGACTGGCTCGGAACATaGACATGTTGCTGTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KMLSTSTFKVAWRFSVTLDWLGT*TCCCVV Trigger: AACTACACAGCAACATGTTCATGTTCCGAGCCAGTC...TAGAGTGACACTAAATCTCCAAGCCACTTTGAAGGTGGAAGTAGACAACATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR TCA 90 bp | TACCTGTGTATAACCTTGAATGTCGGTGCTATGTTTTCTTTGATTTCACAGGAAGATATGGTCACATGGTaGAGTGCTGGCAAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YLCITLNVGAMFSLISQEDMVTW*SAGKSR Trigger: TCTGCTCTTGCCAGCACTTCACCATGTGACCATATC...TTCCTGTGAAATCAAAGAAAACATAGCACCGACATTCAAGGTTATACACAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR TCA 90 bp | GTGCCACATGGACATATGAGCAAGTGTGTTGTTGTTTTCTTTGTTTACAAACAGCATTTTCATGAGGGCTaGGCATCTTTCCCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPHGHMSKCVVVFFVYKQHFHEG*ASFPLS Trigger: AGAGAGAGGGAAAGATGCTCAGCCCTCATGAAAATG...CTGTTTGTAAACAAAGAAAACAACAACACACTTGCTCATATGTCCATGTGGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR TCA 90 bp | TACCTGTGTATAACCTTGAATGTCGGTGCTATGTTTTCTTTGATTTCACAGGAAAGTCACATCAAAGTGTaGGCCATTGCAGCCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YLCITLNVGAMFSLISQESHIKV*AIAAQG Trigger: TCCTTGGGCTGCAATGGCTCACACTTTGATGTGACT...TTCCTGTGAAATCAAAGAAAACATAGCACCGACATTCAAGGTTATACACAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | GTGCCACATGGACATATGAGCAAGTGTGTTGTTGTTTTCTTTGTTTACAAACAGGAGTCTGATGATGGATaGTTTGTCCAGTTGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VPHGHMSKCVVVFFVYKQESDDG*FVQLGG Trigger: ACCTCCCAACTGGACAAAGCATCCATCATCAGACTC...CTGTTTGTAAACAAAGAAAACAACAACACACTTGCTCATATGTCCATGTGGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | GTGCCACATGGACATATGAGCAAGTGTGTTGTTGTTTTCTTTGTTTACAAACAGCATAGCAGAGAGAACTaGGATCTGGGAACTGCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VPHGHMSKCVVVFFVYKQHSREN*DLGTAY Trigger: ATAGGCAGTTCCCAGATCGCAGTTCTCTCTGCTATG...CTGTTTGTAAACAAAGAAAACAACAACACACTTGCTCATATGTCCATGTGGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | TTTCCAGATAGAATGGGCTTCATAGAGAATAAGGAATTGTGTGTGTTCTTCTTAGGTCACATGGTGAAGTaGTGGCAAGAGCAGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FPDRMGFIENKELCVFFLGHMVK*WQEQSC Trigger: ACAGCTCTGCTCTTGCCAGCACTTCACCATGTGACC...TAAGAAGAACACACACAATTCCTTATTCTCTATGAAGCCCATTCTATCTGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | TTTCCAGATAGAATGGGCTTCATAGAGAATAAGGAATTGTGTGTGTTCTTCTTATCCCTTGTGTCCTTGTaGTGGGTCTGGTTGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: FPDRMGFIENKELCVFFLSLVSL*WVWLHP Trigger: AGGATGCAACCAGACCCAGCACAAGGACACAAGGGA...TAAGAAGAACACACACAATTCCTTATTCTCTATGAAGCCCATTCTATCTGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | TCTATTTATGATATACTTGCATGTATCCACAGCTGTTCTGACACCCACTTAAAAGGCCAGCATTCCGCTTaGCCAAAACACACTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SIYDILACIHSCSDTHLKGQHSA*PKHTSS Trigger: GGATGAAGTGTGTTTTGGCCAAGCGGAATGCTGGCC...TTTTAAGTGGGTGTCAGAACAGCTGTGGATACATGCAAGTATATCATAAATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | GTGCCACATGGACATATGAGCAAGTGTGTTGTTGTTTTCTTTGTTTACAAACAGTTAATGGAAGCCAGTTaGTCTGGAGGGGCTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VPHGHMSKCVVVFFVYKQLMEAS*SGGAFL Trigger: AAGGAAAGCCCCTCCAGACCAACTGGCTTCCATTAA...CTGTTTGTAAACAAAGAAAACAACAACACACTTGCTCATATGTCCATGTGGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| 3UTR CAA 72 bp | TATCGTGCTCTGAGACGTTCTTACATGCGTCTCCTGTaGTCATGTAGTACTTTTCAGATCTTCTTTGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: YRALRRSYMRLL*SCSTFQIFFGY Trigger: GTAACCAAAGAAGATCTGAAAAGTACTACATGACAACAGGAGACGCATGTAAGAACGTCTCAGAGCACGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR TCA 90 bp | TCTATTTATGATATACTTGCATGTATCCACAGCTGTTCTGACACCCACTTAAAATGGTCTCCTGCTGTCTaGTGGGGAGACATATCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SIYDILACIHSCSDTHLKWSPAV*WGDISE Trigger: TTCAGATATGTCTCCCCATCAGACAGCAGGAGACCA...TTTTAAGTGGGTGTCAGAACAGCTGTGGATACATGCAAGTATATCATAAATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | CTATATTCCTCACTGATTTGCATGCTTCTCCATTTTCATTGGCGATGTTGTTCTATCTTTCCCTCTCTCTaGTGGATATGGTCACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYSSLICMLLHFHWRCCSIFPSL*WIWSHG Trigger: ACCATGTGACCATATCCAGCAGAGAGAGGGAAAGAT...AGAACAACATCGCCAATGAAAATGGAGAAGCATGCAAATCAGTGAGGAATATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | TACCTGTGTATAACCTTGAATGTCGGTGCTATGTTTTCTTTGATTTCACAGGAACTCGCCAAGCCCTTCTaGAAAGACCACTCTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: YLCITLNVGAMFSLISQELAKPF*KDHSHF Trigger: AAAATGAGAGTGGTCTTTCCAGAAGGGCTTGGCGAG...TTCCTGTGAAATCAAAGAAAACATAGCACCGACATTCAAGGTTATACACAGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | TCTATTTATGATATACTTGCATGTATCCACAGCTGTTCTGACACCCACTTAAAATTAGAGGCTGATATCTaGTCCAGGGAGAGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIYDILACIHSCSDTHLKLEADI*SRESCS Trigger: GCTACAGCTCTCCCTGGACCAGATATCAGCCTCTAA...TTTTAAGTGGGTGTCAGAACAGCTGTGGATACATGCAAGTATATCATAAATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | TACCTGTGTATAACCTTGAATGTCGGTGCTATGTTTTCTTTGATTTCACAGGAATCCGATCTCTCAGTATaGAATCCCGAATACTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YLCITLNVGAMFSLISQESDLSV*NPEYWG Trigger: TCCCCAGTATTCGGGATTCCATACTGAGAGATCGGA...TTCCTGTGAAATCAAAGAAAACATAGCACCGACATTCAAGGTTATACACAGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | AAAATGTTGTCTACTTCCACCTTCAAAGTGGCTTGGAGATTTAGTGTCACTCTATCAAAATACTGCCGGTaGGAGCCAAAACAGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KMLSTSTFKVAWRFSVTLSKYCR*EPKQFG Trigger: TCCAAACTGTTTTGGCTCCCACCGGCAGTATTTTGA...TAGAGTGACACTAAATCTCCAAGCCACTTTGAAGGTGGAAGTAGACAACATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR TCA 90 bp | TGGGAACACTCTAGCCCTATAAAGTATAACCAGGAAATAATAAGTGGTTTTCTGTTCTCAATCAAGTCCTaGGGTTCATATCCAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WEHSSPIKYNQEIISGFLFSIKS*GSYPVS Trigger: GCTGACTGGATATGAACCTCAGGACTTGATTGAGAA...CAGAAAACCACTTATTATTTCCTGGTTATACTTTATAGGGCTAGAGTGTTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR TCA 90 bp | TCTATTTATGATATACTTGCATGTATCCACAGCTGTTCTGACACCCACTTAAAATTCTGTGGATGGAGGTaGTATGAGGCATGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIYDILACIHSCSDTHLKFCGWR*YEACCS Trigger: AGAACAGCATGCCTCATATCACCTCCATCCACAGAA...TTTTAAGTGGGTGTCAGAACAGCTGTGGATACATGCAAGTATATCATAAATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | AGTTTAATTCTGCACCCACTTAAAACGAACATCAAAACTGGAATTAAGCAGAGAGAGTCTGATGATGGATaGTTTGTCCAGTTGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLILHPLKTNIKTGIKQRESDDG*FVQLGG Trigger: ACCTCCCAACTGGACAAAGCATCCATCATCAGACTC...TCTCTGCTTAATTCCAGTTTTGATGTTCGTTTTAAGTGGGTGCAGAATTAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219436.2 |
||
| CDS-3UTR GCA 90 bp | CTATATTCCTCACTGATTTGCATGCTTCTCCATTTTCATTGGCGATGTTGTTCTGGGCTGTTGATAGTTTaGAAAACAGAGGGAGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LYSSLICMLLHFHWRCCSGLLIV*KTEGVF Trigger: AAACACTCCCTCTGTTTTGCAAACTATCAACAGCCC...AGAACAACATCGCCAATGAAAATGGAGAAGCATGCAAATCAGTGAGGAATATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | TTTCCAGATAGAATGGGCTTCATAGAGAATAAGGAATTGTGTGTGTTCTTCTTATCTCTCTGCTGGATATaGTCACATGGTGAAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPDRMGFIENKELCVFFLSLCWI*SHGEVL Trigger: CAGCACTTCACCATGTGACCATATCCAGCAGAGAGA...TAAGAAGAACACACACAATTCCTTATTCTCTATGAAGCCCATTCTATCTGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | TGGGAACACTCTAGCCCTATAAAGTATAACCAGGAAATAATAAGTGGTTTTCTGTCCTCTTTAATCATCTaGTGGGTGGCTCTTATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WEHSSPIKYNQEIISGFLSSLII*WVALMR Trigger: TCTCATAAGAGCCACCCAGCAGATGATTAAAGAGGA...CAGAAAACCACTTATTATTTCCTGGTTATACTTTATAGGGCTAGAGTGTTCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR GCA 90 bp | TCTATTTATGATATACTTGCATGTATCCACAGCTGTTCTGACACCCACTTAAAACAAAGTGTGAGCCATTaGAGCCCAAGGAATAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SIYDILACIHSCSDTHLKQSVSH*SPRNSF Trigger: GAAACTATTCCTTGGGCTGCAATGGCTCACACTTTG...TTTTAAGTGGGTGTCAGAACAGCTGTGGATACATGCAAGTATATCATAAATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | TCTATTTATGATATACTTGCATGTATCCACAGCTGTTCTGACACCCACTTAAAAAGAACCTGTAGTACTTaGTGGTCACTTGTCCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SIYDILACIHSCSDTHLKRTCST*WSLVPS Trigger: TGAAGGGACAAGTGACCACCAAGTACTACAGGTTCT...TTTTAAGTGGGTGTCAGAACAGCTGTGGATACATGCAAGTATATCATAAATAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CCA 90 bp | AGTTTAATTCTGCACCCACTTAAAACGAACATCAAAACTGGAATTAAGCAGAGATCACAGTGCTCTTCCTaGATTTTCGCTTACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLILHPLKTNIKTGIKQRSQCSS*IFAYLL Trigger: CAGAAGGTAAGCGAAAATCCAGGAAGAGCACTGTGA...TCTCTGCTTAATTCCAGTTTTGATGTTCGTTTTAAGTGGGTGCAGAATTAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219436.2 |
||
| CDS-3UTR GCA 90 bp | AGTTTAATTCTGCACCCACTTAAAACGAACATCAAAACTGGAATTAAGCAGAGATTAATGACCTCACAGTaGTCTTCCTGGATTTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLILHPLKTNIKTGIKQRLMTSQ*SSWIFA Trigger: AGCGAAAATCCAGGAAGAGCACTGTGAGGTCATTAA...TCTCTGCTTAATTCCAGTTTTGATGTTCGTTTTAAGTGGGTGCAGAATTAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219436.2 |
||
| CDS-3UTR CCA 90 bp | TGGGAACACTCTAGCCCTATAAAGTATAACCAGGAAATAATAAGTGGTTTTCTGTCTTTAATCATCTGCTaGGTGGCTCTTATGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WEHSSPIKYNQEIISGFLSLIIC*VALMRV Trigger: AACTCTCATAAGAGCCACCCAGCAGATGATTAAAGA...CAGAAAACCACTTATTATTTCCTGGTTATACTTTATAGGGCTAGAGTGTTCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| 3UTR CAA 72 bp | ATATTCCTCACTGATTTGCATGCTTCTCCATTTTCATaGGCGATGTTGTTCTGTTATACCCAAGAAGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IFLTDLHASPFS*AMLFCYTQEVV Trigger: TACTACTTCTTGGGTATAACAGAACAACATCGCCAATGAAAATGGAGAAGCATGCAAATCAGTGAGGAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS GCA 90 bp | CCAGGGATCTCTCCCAGTAGGTGGTGCTCCCAGGAAGTACCTGCCTaGCTCGCACCGTCCTCCCTCGCAGGCTTGGGTGTGGAAGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGISPSRWCSQEVPA*LAPSSLAGLGVEVP Trigger: AGGCACTTCCACACCCAAGCCTGCGAGGGAGGACGGTGCGAGGCAGGCAGGTACTTCCTGGGAGCACCACCTACTGGGAGAGATCCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS GCA 90 bp | CAAAGCTGCTCGAGAGCCCCACCAGGGATCTCTCCCAGTAGGTGGTaGTCCCAGGAAGTACCTGCCTGCCTCGCACCGTCCTCCCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: QSCSRAPPGISPSRW*SQEVPACLAPSSLA Trigger: TGCGAGGGAGGACGGTGCGAGGCAGGCAGGTACTTCCTGGGAGCACCACCTACTGGGAGAGATCCCTGGTGGGGCTCTCGAGCAGCTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS CCA 90 bp | CCCAGGAAGTACCTGCCTGCCTCGCACCGTCCTCCCTCGCAGGCTTaGGTGTGGAAGTGCCTGTCCTCCACCAGCCTGGAATGGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRKYLPASHRPPSQA*VWKCLSSTSLEWSR Trigger: TCTGGACCATTCCAGGCTGGTGGAGGACAGGCACTTCCACACCCAAGCCTGCGAGGGAGGACGGTGCGAGGCAGGCAGGTACTTCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS CCA 90 bp | AGGCAAAGCTGCTCGAGAGCCCCACCAGGGATCTCTCCCAGTAGGTaGTGCTCCCAGGAAGTACCTGCCTGCCTCGCACCGTCCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RQSCSRAPPGISPSR*CSQEVPACLAPSSL Trigger: GAGGGAGGACGGTGCGAGGCAGGCAGGTACTTCCTGGGAGCACCACCTACTGGGAGAGATCCCTGGTGGGGCTCTCGAGCAGCTTTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS CCA 90 bp | GGACAATTCGTGCTGAGAGCCAGGCCTCTCTGGGTCCAGGAGCTGTaGGGAGGCAGTATCAGTCAGGGGACTTCCACCCCACTGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GQFVLRARPLWVQEL*GGSISQGTSTPLAV Trigger: GACAGCCAGTGGGGTGGAAGTCCCCTGACTGATACTGCCTCCCCACAGCTCCTGGACCCAGAGAGGCCTGGCTCTCAGCACGAATTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS GCA 90 bp | ATAGGCTTCTCTGCTCTCCGGGGAGGCCTTGGTAAGAGGCAAAGCTaGTCGAGAGCCCCACCAGGGATCTCTCCCAGTAGGTGGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IGFSALRGGLGKRQS*SRAPPGISPSRWCS Trigger: GGAGCACCACCTACTGGGAGAGATCCCTGGTGGGGCTCTCGAGCAGCTTTGCCTCTTACCAAGGCCTCCCCGGAGAGCAGAGAAGCCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS CCA 90 bp | CCGAGTTCGCGACCAACGTTGTCCAAGGGGCTGGTTCGACTGGTGTaGCCCCACGCCTCGCCAAGCCCTTCTGGAAAGACCACTCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: PSSRPTLSKGLVRLV*PHASPSPSGKTTLI Trigger: AATGAGAGTGGTCTTTCCAGAAGGGCTTGGCGAGGCGTGGGGCCACACCAGTCGAACCAGCCCCTTGGACAACGTTGGTCGCGAACTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS CCA 90 bp | CTGCCTATACGCACAGGACAATTCGTGCTGAGAGCCAGGCCTCTCTaGGTCCAGGAGCTGTGGGGAGGCAGTATCAGTCAGGGGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPIRTGQFVLRARPL*VQELWGGSISQGTS Trigger: GGAAGTCCCCTGACTGATACTGCCTCCCCACAGCTCCTGGACCCAGAGAGGCCTGGCTCTCAGCACGAATTGTCCTGTGCGTATAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS CCA 90 bp | CTCCCTCGCAGGCTTGGGTGTGGAAGTGCCTGTCCTCCACCAGCCTaGAATGGTCCAGAGCAAAACCATAGCAGAGAGAACTGCGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPRRLGCGSACPPPA*NGPEQNHSRENCDL Trigger: CAGATCGCAGTTCTCTCTGCTATGGTTTTGCTCTGGACCATTCCAGGCTGGTGGAGGACAGGCACTTCCACACCCAAGCCTGCGAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS TCA 90 bp | AGGGCTGAGCATCTTTCCCTCTCTCTGCTGGATATGGTCACATGGTaGAGTGCTGGCAAGAGCAGAGCTGTGGCAGACCTCACCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RAEHLSLSLLDMVTW*SAGKSRAVADLTCG Trigger: CCCACAGGTGAGGTCTGCCACAGCTCTGCTCTTGCCAGCACTTCACCATGTGACCATATCCAGCAGAGAGAGGGAAAGATGCTCAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CAA 90 bp | ACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTGAACCACGTGTCCACCTGCCTTGCTACTGGAGAGCCTaGACTTGGCCCCCTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TLSLWLPQALFEPRVHLPCYWRA*TWPPSC Trigger: ACAGGAAGGGGGCCAAGTCAAGGCTCTCCAGTAGCA...AGGCAGGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS TCA 90 bp | GGTATCGGTCACCAGATTCACTGGCTGACCCAGGGTCTGGAGAGCTaGCCACACTATCTTCATCCCAGTGACCTCGACCGTGGATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GIGHQIHWLTQGLES*PHYLHPSDLDRGFC Trigger: ACAGAATCCACGGTCGAGGTCACTGGGATGAAGATAGTGTGGTCAGCTCTCCAGACCCTGGGTCAGCCAGTGAATCTGGTGACCGATACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS GCA 90 bp | CCACCAGCCTGGAATGGTCCAGAGCAAAACCATAGCAGAGAGAACTaGGATCTGGGAACTGCCTATACGCACAGGACAATTCGTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPAWNGPEQNHSREN*DLGTAYTHRTIRAE Trigger: CTCAGCACGAATTGTCCTGTGCGTATAGGCAGTTCCCAGATCGCAGTTCTCTCTGCTATGGTTTTGCTCTGGACCATTCCAGGCTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS CCA 90 bp | CCTGGAATGGTCCAGAGCAAAACCATAGCAGAGAGAACTGCGATCTaGGAACTGCCTATACGCACAGGACAATTCGTGCTGAGAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGMVQSKTIAERTAI*ELPIRTGQFVLRAR Trigger: CCTGGCTCTCAGCACGAATTGTCCTGTGCGTATAGGCAGTTCCCAGATCGCAGTTCTCTCTGCTATGGTTTTGCTCTGGACCATTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS TCA 90 bp | ATTTTGATACTGTTCGGTGCGGTATCGGTCACCAGATTCACTGGCTaGCCCAGGGTCTGGAGAGCTGACCACACTATCTTCATCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ILILFGAVSVTRFTG*PRVWRADHTIFIPV Trigger: CACTGGGATGAAGATAGTGTGGTCAGCTCTCCAGACCCTGGGTCAGCCAGTGAATCTGGTGACCGATACCGCACCGAACAGTATCAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS CCA 90 bp | ATGGTGAAGTGCTGGCAAGAGCAGAGCTGTGGCAGACCTCACCTGTaGGTGGGGGCTGTTGATAGTTTGCAAAACAGAGGGAGTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: MVKCWQEQSCGRPHL*VGAVDSLQNRGSVF Trigger: AAAAACACTCCCTCTGTTTTGCAAACTATCAACAGCCCCCACCCACAGGTGAGGTCTGCCACAGCTCTGCTCTTGCCAGCACTTCACCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CAA 90 bp | AATCCACACTTTCCCTGTGGCTTCCCCAAGCACTCTTTGAACCACGTGTCCACCATAACAGATGTTCCCTaGTGTCCTTGTGCTGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NPHFPCGFPKHSLNHVSTITDVP*CPCAGS Trigger: AGACCCAGCACAAGGACACAAGGGAACATCTGTTAT...GGTGGACACGTGGTTCAAAGAGTGCTTGGGGAAGCCACAGGGAAAGTGTGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CAA 90 bp | GTGCCACATGGACATATGAGCAAGTGTGTTGTTGTTTTCTTTGTTTACAAACAGCTGGAGAGCCTTGACTaGGCCCCCTTCCTGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VPHGHMSKCVVVFFVYKQLESLD*APFLLS Trigger: GGACAACAGGAAGGGGGCCAAGTCAAGGCTCTCCAG...CTGTTTGTAAACAAAGAAAACAACAACACACTTGCTCATATGTCCATGTGGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS CCA 90 bp | CTGCTGGGTGGCTCTTATGAGAGTTTCAATTTTGCTAGGTTCATGTaGGCTATTTTGATACTGTTCGGTGCGGTATCGGTCACCAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: LLGGSYESFNFARFM*AILILFGAVSVTRF Trigger: GAATCTGGTGACCGATACCGCACCGAACAGTATCAAAATAGCCCACATGAACCTAGCAAAATTGAAACTCTCATAAGAGCCACCCAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CAA 90 bp | GCTAGCCAACAGATTTTTACCTACAGTGAAATCCTTATCCACACAATCCTGGCCGAGAGCTGTAGCCCTTaGTATTCTGTGTCTGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASQQIFTYSEILIHTILAESCSP*YSVSVR Trigger: CCTCACAGACACAGAATACAAAGGGCTACAGCTCTC...GGCCAGGATTGTGTGGATAAGGATTTCACTGTAGGTAAAAATCTGTTGGCTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS TCA 90 bp | GCTCTTATGAGAGTTTCAATTTTGCTAGGTTCATGTGGGCTATTTTaGTACTGTTCGGTGCGGTATCGGTCACCAGATTCACTGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ALMRVSILLGSCGLF*YCSVRYRSPDSLAD Trigger: GTCAGCCAGTGAATCTGGTGACCGATACCGCACCGAACAGTATCAAAATAGCCCACATGAACCTAGCAAAATTGAAACTCTCATAAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS GCA 90 bp | GTTATTATAACAGATGTTCCCTTGTGTCCTTGTGCTGGGTCTGGTTaGATCCTTAGATGGGAAGTCACATCAAAGTGTGAGCCATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VIITDVPLCPCAGSG*ILRWEVTSKCEPLQ Trigger: CTGCAATGGCTCACACTTTGATGTGACTTCCCATCTAAGGATGCAACCAGACCCAGCACAAGGACACAAGGGAACATCTGTTATAATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CAA 90 bp | GCTAGCCAACAGATTTTTACCTACAGTGAAATCCTTATCCACACAATCCTGGCCTTCATGTGGGCTATTTaGATACTGTTCGGTGCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ASQQIFTYSEILIHTILAFMWAI*ILFGAV Trigger: TACCGCACCGAACAGTATCAAAATAGCCCACATGAA...GGCCAGGATTGTGTGGATAAGGATTTCACTGTAGGTAAAAATCTGTTGGCTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CAA 90 bp | AAAATGTTGTCTACTTCCACCTTCAAAGTGGCTTGGAGATTTAGTGTCACTCTATGTTCCCTTGTGTCCTaGTGCTGGGTCTGGTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KMLSTSTFKVAWRFSVTLCSLVS*CWVWLH Trigger: ATGCAACCAGACCCAGCACAAGGACACAAGGGAACA...TAGAGTGACACTAAATCTCCAAGCCACTTTGAAGGTGGAAGTAGACAACATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CAA 90 bp | CTATATTCCTCACTGATTTGCATGCTTCTCCATTTTCATTGGCGATGTTGTTCTCTGATGATGGATGCTTaGTCCAGTTGGGAGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LYSSLICMLLHFHWRCCSLMMDA*SSWEVM Trigger: CATCACCTCCCAACTGGACAAAGCATCCATCATCAG...AGAACAACATCGCCAATGAAAATGGAGAAGCATGCAAATCAGTGAGGAATATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CAA 90 bp | GTGCCACATGGACATATGAGCAAGTGTGTTGTTGTTTTCTTTGTTTACAAACAGATTAATGGAAGCCAGTaGGTCTGGAGGGGCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VPHGHMSKCVVVFFVYKQINGSQ*VWRGFP Trigger: AGGAAAGCCCCTCCAGACCAACTGGCTTCCATTAAT...CTGTTTGTAAACAAAGAAAACAACAACACACTTGCTCATATGTCCATGTGGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CAA 90 bp | AAAATGTTGTCTACTTCCACCTTCAAAGTGGCTTGGAGATTTAGTGTCACTCTATGTGGGTGGGGGCTGTaGATAGTTTGCAAAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KMLSTSTFKVAWRFSVTLCGWGL*IVCKTE Trigger: CTCTGTTTTGCAAACTATCAACAGCCCCCACCCACA...TAGAGTGACACTAAATCTCCAAGCCACTTTGAAGGTGGAAGTAGACAACATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
||
| CDS-3UTR CAA 90 bp | AGTTTAATTCTGCACCCACTTAAAACGAACATCAAAACTGGAATTAAGCAGAGACTGATGATGGATGCTTaGTCCAGTTGGGAGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SLILHPLKTNIKTGIKQRLMMDA*SSWEVM Trigger: CATCACCTCCCAACTGGACAAAGCATCCATCATCAG...TCTCTGCTTAATTCCAGTTTTGATGTTCGTTTTAAGTGGGTGCAGAATTAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219436.2 |
||
| CDS-3UTR CAA 90 bp | TGGGAACACTCTAGCCCTATAAAGTATAACCAGGAAATAATAAGTGGTTTTCTGGTCCTAGATTTTGACTaGCTACTGGAGAGCCTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: WEHSSPIKYNQEIISGFLVLDFD*LLESLD Trigger: GTCAAGGCTCTCCAGTAGCAAGTCAAAATCTAGGAC...CAGAAAACCACTTATTATTTCCTGGTTATACTTTATAGGGCTAGAGTGTTCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS-3UTR CAA 90 bp | TTTCCAGATAGAATGGGCTTCATAGAGAATAAGGAATTGTGTGTGTTCTTCTTAATGTTGCTGTGTAGTTaGATCTCTGTCACAGCACTC | + |
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Preference number: 5 (lower is better) Translates to: FPDRMGFIENKELCVFFLMLLCS*ISVTAL Trigger: GAGTGCTGTGACAGAGATCAAACTACACAGCAACAT...TAAGAAGAACACACACAATTCCTTATTCTCTATGAAGCCCATTCTATCTGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS-3UTR CAA 90 bp | TGGGAACACTCTAGCCCTATAAAGTATAACCAGGAAATAATAAGTGGTTTTCTGCGGAACATGAACATGTaGCTGTGTAGTTTGATCTCT | + |
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Preference number: 5 (lower is better) Translates to: WEHSSPIKYNQEIISGFLRNMNM*LCSLIS Trigger: AGAGATCAAACTACACAGCAACATGTTCATGTTCCG...CAGAAAACCACTTATTATTTCCTGGTTATACTTTATAGGGCTAGAGTGTTCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS-3UTR CAA 90 bp | AAAATGTTGTCTACTTCCACCTTCAAAGTGGCTTGGAGATTTAGTGTCACTCTAATGAGAGTTTCAATTTaGCTAGGTTCATGTGGGCTA | + |
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Preference number: 5 (lower is better) Translates to: KMLSTSTFKVAWRFSVTLMRVSI*LGSCGL Trigger: TAGCCCACATGAACCTAGCAAAATTGAAACTCTCAT...TAGAGTGACACTAAATCTCCAAGCCACTTTGAAGGTGGAAGTAGACAACATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CCA 72 bp | GAGAGCCGAGTTCGCGACCAACGTTGTCCAAGGGGCTaGTTCGACTGGTGTGGCCCCACGCCTCGCCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: ESRVRDQRCPRG*FDWCGPTPRQA Trigger: GGCTTGGCGAGGCGTGGGGCCACACCAGTCGAACCAGCCCCTTGGACAACGTTGGTCGCGAACTCGGCTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CAA 72 bp | GTACCTGCCTGCCTCGCACCGTCCTCCCTCGCAGGCTaGGGTGTGGAAGTGCCTGTCCTCCACCAGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VPACLAPSSLAG*GVEVPVLHQPG Trigger: TCCAGGCTGGTGGAGGACAGGCACTTCCACACCCAAGCCTGCGAGGGAGGACGGTGCGAGGCAGGCAGGTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS GCA 72 bp | TCTCCCAGTAGGTGGTGCTCCCAGGAAGTACCTGCCTaGCTCGCACCGTCCTCCCTCGCAGGCTTGGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SPSRWCSQEVPA*LAPSSLAGLGV Trigger: CACACCCAAGCCTGCGAGGGAGGACGGTGCGAGGCAGGCAGGTACTTCCTGGGAGCACCACCTACTGGGAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CCA 72 bp | TACCTGCCTGCCTCGCACCGTCCTCCCTCGCAGGCTTaGGTGTGGAAGTGCCTGTCCTCCACCAGCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: YLPASHRPPSQA*VWKCLSSTSLE Trigger: TTCCAGGCTGGTGGAGGACAGGCACTTCCACACCCAAGCCTGCGAGGGAGGACGGTGCGAGGCAGGCAGGTA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CCA 72 bp | TGCTCGAGAGCCCCACCAGGGATCTCTCCCAGTAGGTaGTGCTCCCAGGAAGTACCTGCCTGCCTCGCACCG | + |
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Preference number: 6 (lower is better) Translates to: CSRAPPGISPSR*CSQEVPACLAP Trigger: CGGTGCGAGGCAGGCAGGTACTTCCTGGGAGCACCACCTACTGGGAGAGATCCCTGGTGGGGCTCTCGAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CAA 90 bp | TCCCAGGAAGTACCTGCCTGCCTCGCACCGTCCTCCCTCGCAGGCTaGGGTGTGGAAGTGCCTGTCCTCCACCAGCCTGGAATGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SQEVPACLAPSSLAG*GVEVPVLHQPGMVQ Trigger: CTGGACCATTCCAGGCTGGTGGAGGACAGGCACTTCCACACCCAAGCCTGCGAGGGAGGACGGTGCGAGGCAGGCAGGTACTTCCTGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS GCA 72 bp | TCTGCTCTCCGGGGAGGCCTTGGTAAGAGGCAAAGCTaGTCGAGAGCCCCACCAGGGATCTCTCCCAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: SALRGGLGKRQS*SRAPPGISPSR Trigger: CCTACTGGGAGAGATCCCTGGTGGGGCTCTCGAGCAGCTTTGCCTCTTACCAAGGCCTCCCCGGAGAGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS TCA 72 bp | CACCAGATTCACTGGCTGACCCAGGGTCTGGAGAGCTaGCCACACTATCTTCATCCCAGTGACCTCGACCGT | + |
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Preference number: 6 (lower is better) Translates to: HQIHWLTQGLES*PHYLHPSDLDR Trigger: ACGGTCGAGGTCACTGGGATGAAGATAGTGTGGTCAGCTCTCCAGACCCTGGGTCAGCCAGTGAATCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS TCA 72 bp | CTGTTCGGTGCGGTATCGGTCACCAGATTCACTGGCTaGCCCAGGGTCTGGAGAGCTGACCACACTATCTTC | + |
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Preference number: 6 (lower is better) Translates to: LFGAVSVTRFTG*PRVWRADHTIF Trigger: GAAGATAGTGTGGTCAGCTCTCCAGACCCTGGGTCAGCCAGTGAATCTGGTGACCGATACCGCACCGAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CCA 72 bp | TGCTGGCAAGAGCAGAGCTGTGGCAGACCTCACCTGTaGGTGGGGGCTGTTGATAGTTTGCAAAACAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: CWQEQSCGRPHL*VGAVDSLQNRG Trigger: CCCTCTGTTTTGCAAACTATCAACAGCCCCCACCCACAGGTGAGGTCTGCCACAGCTCTGCTCTTGCCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CCA 72 bp | AGGCTTGGGTGTGGAAGTGCCTGTCCTCCACCAGCCTaGAATGGTCCAGAGCAAAACCATAGCAGAGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: RLGCGSACPPPA*NGPEQNHSREN Trigger: GTTCTCTCTGCTATGGTTTTGCTCTGGACCATTCCAGGCTGGTGGAGGACAGGCACTTCCACACCCAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS TCA 72 bp | GGGTCTGGAGAGCTGACCACACTATCTTCATCCCAGTaGCCTCGACCGTGGATTCTGTGGATGGAGGTGATA | + |
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Preference number: 6 (lower is better) Translates to: GSGELTTLSSSQ*PRPWILWMEVI Trigger: TATCACCTCCATCCACAGAATCCACGGTCGAGGTCACTGGGATGAAGATAGTGTGGTCAGCTCTCCAGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CCA 72 bp | AATACTGCCGGTGGGAGCCAAAACAGTTTGGAGAGATaGCAGGATGGTCTCCTGCTGTCTGATGGGGAGACA | + |
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Preference number: 6 (lower is better) Translates to: NTAGGSQNSLER*QDGLLLSDGET Trigger: TGTCTCCCCATCAGACAGCAGGAGACCATCCTGCCATCTCTCCAAACTGTTTTGGCTCCCACCGGCAGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CAA 72 bp | AGGCAGGGAGTGACCCACAGCCACCAAGCCCACATTTaGGTAGCATCCATCAAAGGGAGACATATCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: RQGVTHSHQAHI*VASIKGRHIQA Trigger: AGCCTGGATATGTCTCCCTTTGATGGATGCTACCAAAATGTGGGCTTGGTGGCTGTGGGTCACTCCCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CCA 72 bp | GTATCAGTCAGGGGACTTCCACCCCACTGGCTGTCATaGTCAGATTCCGATCTCTCAGTATGGAATCCCGAA | + |
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Preference number: 6 (lower is better) Translates to: VSVRGLPPHWLS*SDSDLSVWNPE Trigger: TTCGGGATTCCATACTGAGAGATCGGAATCTGACCATGACAGCCAGTGGGGTGGAAGTCCCCTGACTGATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CAA 72 bp | GTCCTAGATTTTGACTTGCTACTGGAGAGCCTTGACTaGGCCCCCTTCCTGTTGTCCGAGATAGTGGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: VLDFDLLLESLD*APFLLSEIVGV Trigger: CACTCCCACTATCTCGGACAACAGGAAGGGGGCCAAGTCAAGGCTCTCCAGTAGCAAGTCAAAATCTAGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CCA 72 bp | CACTGGCTGTCATGGTCAGATTCCGATCTCTCAGTATaGAATCCCGAATACTGGGGATATGGGGAGGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: HWLSWSDSDLSV*NPEYWGYGEVL Trigger: TAGGACCTCCCCATATCCCCAGTATTCGGGATTCCATACTGAGAGATCGGAATCTGACCATGACAGCCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CCA 72 bp | GTCCAGAGCAAAACCATAGCAGAGAGAACTGCGATCTaGGAACTGCCTATACGCACAGGACAATTCGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VQSKTIAERTAI*ELPIRTGQFVL Trigger: CAGCACGAATTGTCCTGTGCGTATAGGCAGTTCCCAGATCGCAGTTCTCTCTGCTATGGTTTTGCTCTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CCA 72 bp | TTGTGTCCTTGTGCTGGGTCTGGTTGCATCCTTAGATaGGAAGTCACATCAAAGTGTGAGCCATTGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: LCPCAGSGCILR*EVTSKCEPLQP Trigger: GGGCTGCAATGGCTCACACTTTGATGTGACTTCCCATCTAAGGATGCAACCAGACCCAGCACAAGGACACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CAA 72 bp | GCTTATCAAAATACTGCCGGTGGGAGCCAAAACAGTTaGGAGAGATGGCAGGATGGTCTCCTGCTGTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: AYQNTAGGSQNS*ERWQDGLLLSD Trigger: ATCAGACAGCAGGAGACCATCCTGCCATCTCTCCAAACTGTTTTGGCTCCCACCGGCAGTATTTTGATAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS GCA 72 bp | ACAGATGTTCCCTTGTGTCCTTGTGCTGGGTCTGGTTaGATCCTTAGATGGGAAGTCACATCAAAGTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: TDVPLCPCAGSG*ILRWEVTSKCE Trigger: CTCACACTTTGATGTGACTTCCCATCTAAGGATGCAACCAGACCCAGCACAAGGACACAAGGGAACATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CAA 72 bp | AGCTTCATATCCAGACTGGCTCGGAACATGAACATGTaGCTGTGTAGTTTGATCTCTGTCACAGCACTCGGA | + |
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Preference number: 6 (lower is better) Translates to: SFISRLARNMNM*LCSLISVTALG Trigger: TCCGAGTGCTGTGACAGAGATCAAACTACACAGCAACATGTTCATGTTCCGAGCCAGTCTGGATATGAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CCA 72 bp | GGCTCTTATGAGAGTTTCAATTTTGCTAGGTTCATGTaGGCTATTTTGATACTGTTCGGTGCGGTATCGGTC | + |
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Preference number: 6 (lower is better) Translates to: GSYESFNFARFM*AILILFGAVSV Trigger: GACCGATACCGCACCGAACAGTATCAAAATAGCCCACATGAACCTAGCAAAATTGAAACTCTCATAAGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS CAA 72 bp | GAGAGTTTCAATTTTGCTAGGTTCATGTGGGCTATTTaGATACTGTTCGGTGCGGTATCGGTCACCAGATTC | + |
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Preference number: 6 (lower is better) Translates to: ESFNFARFMWAI*ILFGAVSVTRF Trigger: GAATCTGGTGACCGATACCGCACCGAACAGTATCAAAATAGCCCACATGAACCTAGCAAAATTGAAACTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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| CDS TCA 72 bp | AGAGTTTCAATTTTGCTAGGTTCATGTGGGCTATTTTaGTACTGTTCGGTGCGGTATCGGTCACCAGATTCA | + |
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Preference number: 6 (lower is better) Translates to: RVSILLGSCGLF*YCSVRYRSPDS Trigger: TGAATCTGGTGACCGATACCGCACCGAACAGTATCAAAATAGCCCACATGAACCTAGCAAAATTGAAACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020071.4 |
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