Pregenerated sensors for SIL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024357Ensembl transcript IDs: ENSMUST00000025215.10, ENSMUST00000235524.2, ENSMUST00000235619.2, ENSMUST00000236007.2, ENSMUST00000237232.2, ENSMUST00000237309.2, ENSMUST00000237896.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGCAATCACGCGGACTTTAATCGGCACATTTCAGCTTTCAGACTaGGCCATCCTTCTTCTCAAAGAGCTGGTTCAGACATCATATCTA | + |
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Preference number: 1 (lower is better) Translates to: AAITRTLIGTFQLSD*AILLLKELVQTSYL Trigger: TAGATATGATGTCTGAACCAGCTCTTTGAGAAGAAGGATGGCTCAGTCTGAAAGCTGAAATGTGCCGATTAAAGTCCGCGTGATTGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237309.2 |
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| 3UTR GCA 90 bp | TCTAAAACAGACTTGCACACAGTAAATCCACAGTTAACAGCATGCTaGAGCAGAAAGCTGGAATTGTTTATTCACAAATCTGCACACTGC | + |
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Preference number: 1 (lower is better) Translates to: SKTDLHTVNPQLTAC*SRKLELFIHKSAHC Trigger: GCAGTGTGCAGATTTGTGAATAAACAATTCCAGCTTTCTGCTGCAGCATGCTGTTAACTGTGGATTTACTGTGTGCAAGTCTGTTTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236007.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGACTTGCACACAGTAAATCCACAGTTAACAGCATGCTGCAGCAGAAAGCTGCACAAATCTGCACACTaGCATACTTCCTGCCATGAT | + |
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Preference number: 2 (lower is better) Translates to: TDLHTVNPQLTACCSRKLHKSAH*HTSCHD Trigger: ATCATGGCAGGAAGTATGGCAGTGTGCAGATTTGTG...CAGCTTTCTGCTGCAGCATGCTGTTAACTGTGGATTTACTGTGTGCAAGTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236007.2 |
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| 3UTR CAA 90 bp | ACAGTAAATCCACAGTTAACAGCATGCTGCAGCAGAAAGCTGGAATaGTTTATTCACAAATCTGCACACTGCCATACTTCCTGCCATGAT | + |
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Preference number: 2 (lower is better) Translates to: TVNPQLTACCSRKLE*FIHKSAHCHTSCHD Trigger: ATCATGGCAGGAAGTATGGCAGTGTGCAGATTTGTGAATAAACAATTCCAGCTTTCTGCTGCAGCATGCTGTTAACTGTGGATTTACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236007.2 |
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| 3UTR-3UTR TCA 90 bp | AATCTGCTTTCCCATAAAACCTGGAGTCAGAGACTTTCTTCATTCCCCTTGGCCAACATAGTCAGTTTCTaGAAAGGTTCTCCAATCTCT | + |
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Preference number: 2 (lower is better) Translates to: NLLSHKTWSQRLSSFPLANIVSF*KGSPIS Trigger: AGAGATTGGAGAACCTTTTCAGAAACTGACTATGTT...GGCCAAGGGGAATGAAGAAAGTCTCTGACTCCAGGTTTTATGGGAAAGCAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237309.2 |
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| 3UTR TCA 72 bp | CACTCATGCCCCAGCAGGTTAAGTCCTCCTCGTAGTTaGTGTCCCCTGAAGAGCCCACCAAAGCTCTCACTA | + |
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Preference number: 3 (lower is better) Translates to: HSCPSRLSPPRS*CPLKSPPKLSL Trigger: TAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAACTACGAGGAGGACTTAACCTGCTGGGGCATGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| 3UTR GCA 72 bp | GACTTGCACACAGTAAATCCACAGTTAACAGCATGCTaGAGCAGAAAGCTGGAATTGTTTATTCACAAATCT | + |
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Preference number: 3 (lower is better) Translates to: DLHTVNPQLTAC*SRKLELFIHKS Trigger: AGATTTGTGAATAAACAATTCCAGCTTTCTGCTGCAGCATGCTGTTAACTGTGGATTTACTGTGTGCAAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236007.2 |
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| CDS-3UTR TCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCCCTGTACCAGGCTCCTaGGGACCTGCAGGCCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVPVPGS*GPAGPR Trigger: TCGGGGGCCTGCAGGTCCTCAGGAGCCTGGTACAGG...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR TCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGCCTGTACCAGGCTCCTaGGGACCTGCAGGCCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLPVPGS*GPAGPR Trigger: TCGGGGGCCTGCAGGTCCTCAGGAGCCTGGTACAGG...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCCTGTTCCTGCAGGCCTaGCAGGAGCTGCACCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVLFLQA*QELHLA Trigger: CGCCAGGTGCAGCTCCTGCCAGGCCTGCAGGAACAG...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR TCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCCTGTACCAGGCTCCTaGGGACCTGCAGGCCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVPVPGS*GPAGPR Trigger: TCGGGGGCCTGCAGGTCCTCAGGAGCCTGGTACAGG...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCGGGCTCCCCCTTCGATaGCTTCCACCTGGACCTTCG | + |
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Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVGLPLR*LPPGPS Trigger: CGAAGGTCCAGGTGGAAGCCATCGAAGGGGGAGCCC...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGCTGTTCCTGCAGGCCTaGCAGGAGCTGCACCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLLFLQA*QELHLA Trigger: CGCCAGGTGCAGCTCCTGCCAGGCCTGCAGGAACAG...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR GCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGAGGCCTGGCAGGAGCTaGACCTGGCGATACTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLRPGRS*TWRYCC Trigger: GCAGCAGTATCGCCAGGTGCAGCTCCTGCCAGGCCT...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCGGCAGGAGCTGCACCTaGCGATACTGCTGCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVGRSCT*RYCCSF Trigger: GAAGCTGCAGCAGTATCGCCAGGTGCAGCTCCTGCC...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGTTCCTGCAGGCCTaGCAGGAGCTGCACCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVLFLQA*QELHLA Trigger: CGCCAGGTGCAGCTCCTGCCAGGCCTGCAGGAACAG...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCAGCGATCCCGGCAGGTaGTCAGGAGGGCACCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVSDPGR*SGGHPV Trigger: CACTGGGTGCCCTCCTGACCACCTGCCGGGATCGCT...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR TCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCGGCGGAAGAGCTGCTTaGCTGTGGCCTGTCTCGCCA | + |
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Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVGGRAA*LWPVSP Trigger: TGGCGAGACAGGCCACAGTCAAGCAGCTCTTCCGCC...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR GCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCTCGCACATGGGATCCTaGAGGAACAGCCTGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVSHMGS*RNSLTW Trigger: CCAGGTCAGGCTGTTCCTGCAGGATCCCATGTGCGA...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025215.10 |
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| CDS-3UTR GCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCATGACCAGCAGCTTCTaGAGGGCTCCCCCTTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVMTSSF*RAPPSM Trigger: CATCGAAGGGGGAGCCCTGCAGAAGCTGCTGGTCAT...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR GCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCAGGCCTGGCAGGAGCTaGACCTGGCGATACTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVRPGRS*TWRYCC Trigger: GCAGCAGTATCGCCAGGTGCAGCTCCTGCCAGGCCT...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCGGGCTCCCCCTTCGATaGCTTCCACCTGGACCTTCG | + |
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Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVGLPLR*LPPGPS Trigger: CGAAGGTCCAGGTGGAAGCCATCGAAGGGGGAGCCC...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGGCAGGAGCTGCACCTaGCGATACTGCTGCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLGRSCT*RYCCSF Trigger: GAAGCTGCAGCAGTATCGCCAGGTGCAGCTCCTGCC...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGAGGGAGGCCAGGGCTTaGTACTCTGCTTGGAGACGC | + |
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Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLREARA*YSAWRR Trigger: GCGTCTCCAAGCAGAGTACCAAGCCCTGGCCTCCCT...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR TCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGAGGGTCTGCCACTCTTaGGTTGGGTGGAACACCTCC | + |
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Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLRVCHS*VGWNTS Trigger: GGAGGTGTTCCACCCAACTCAAGAGTGGCAGACCCT...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025215.10 |
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| CDS-3UTR TCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCTGGCCAGCGCACTCTTaGGGTCCTGAGATGTGTATG | + |
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Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVWPAHS*GPEMCM Trigger: CATACACATCTCAGGACCTCAAGAGTGCGCTGGCCA...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR GCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGATGGGGCGGAAGAGCTaGTTGACTGTGGCCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLMGRKS*LTVACL Trigger: GAGACAGGCCACAGTCAAGCAGCTCTTCCGCCCCAT...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR GCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGATGACCAGCAGCTTCTaGAGGGCTCCCCCTTCGATG | + |
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Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLMTSSF*RAPPSM Trigger: CATCGAAGGGGGAGCCCTGCAGAAGCTGCTGGTCAT...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR GCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCTGCACCTGGCGATACTaGTGCAGCTTCTCTGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVCTWRY*CSFSGD Trigger: ATCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTGCA...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCACAGGACCTTCTTCTTaGCGGGGAGAGGCTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVTGPSS*RGEAGL Trigger: CAAACCAGCCTCTCCCCGCCAAGAAGAAGGTCCTGT...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCTCTGGGGATGAATCCTaGGTCAACTCTGCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVSGDES*VNSASS Trigger: GGAGGAGGCAGAGTTGACCCAGGATTCATCCCCAGA...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCGGCAGGAGCTGCACCTaGCGATACTGCTGCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVGRSCT*RYCCSF Trigger: GAAGCTGCAGCAGTATCGCCAGGTGCAGCTCCTGCC...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCAGGGAGGCCAGGGCTTaGTACTCTGCTTGGAGACGC | + |
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Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVREARA*YSAWRR Trigger: GCGTCTCCAAGCAGAGTACCAAGCCCTGGCCTCCCT...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGTCATCTTCGCCTTCTTaGAGCTCCAGGGAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLSSSPS*SSREAR Trigger: CCTGGCCTCCCTGGAGCTCCAAGAAGGCGAAGATGA...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR TCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCAGAGGCCATCCTAGTTaGAGGCAGGTGCTGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVRGHPS*RQVLRS Trigger: GCTCCTCAGCACCTGCCTTCAACTAGGATGGCCTCT...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 |
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| CDS-3UTR TCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCGCACTCTTGAGGTCCTaGGATGTGTATGTGTTGGCG | + |
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Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVALLRS*DVYVLA Trigger: CGCCAACACATACACATCTCAGGACCTCAAGAGTGC...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR TCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCTCTCGGTCCCCTCCTTaGATTTGGCCAGCGCACTCT | + |
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Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVSRSPP*IWPAHS Trigger: AGAGTGCGCTGGCCAAATTCAAGGAGGGGACCGAGA...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR TCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCGGAACAGCTGAGTTCTaGCAGCTGAGGCAGAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVGTAEF*QLRQRV Trigger: AACTCTCTGCCTCAGCTGTCAGAACTCAGCTGTTCC...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235619.2 |
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| CDS-3UTR GCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCATGGGGCGGAAGAGCTaGTTGACTGTGGCCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVMGRKS*LTVACL Trigger: GAGACAGGCCACAGTCAAGCAGCTCTTCCGCCCCAT...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGACAGGACCTTCTTCTTaGCGGGGAGAGGCTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLTGPSS*RGEAGL Trigger: CAAACCAGCCTCTCCCCGCCAAGAAGAAGGTCCTGT...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGTCTGGGGATGAATCCTaGGTCAACTCTGCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLSGDES*VNSASS Trigger: GGAGGAGGCAGAGTTGACCCAGGATTCATCCCCAGA...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCTCATCTTCGCCTTCTTaGAGCTCCAGGGAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVSSSPS*SSREAR Trigger: CCTGGCCTCCCTGGAGCTCCAAGAAGGCGAAGATGA...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR TCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGCACTCTTGAGGTCCTaGGATGTGTATGTGTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLALLRS*DVYVLA Trigger: CGCCAACACATACACATCTCAGGACCTCAAGAGTGC...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR TCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCTGGCCAGCGCACTCTTaGGGTCCTGAGATGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVWPAHS*GPEMCM Trigger: CATACACATCTCAGGACCTCAAGAGTGCGCTGGCCA...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCCAAACATCTTCTCAGTaGCCAGGTCATAGAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVQTSSQ*PGHRAG Trigger: CCCTGCTCTATGACCTGGTCACTGAGAAGATGTTTG...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCCAGCAGGGAGCACAGTaGAAACAGGACCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVQQGAQ*KQDLLL Trigger: AAGAAGAAGGTCCTGTTTGCACTGTGCTCCCTGCTG...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCATCCTGGGTCAACTCTaGCTCCTCCTCAGCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVILGQL*LLLSKH Trigger: ATGTTTGCTGAGGAGGAGGCAGAGTTGACCCAGGAT...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGACCTGGCGATACTGCTaGAGCTTCTCTGGGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLTWRYC*SFSGDE Trigger: TTCATCCCCAGAGAAGCTGCAGCAGTATCGCCAGGT...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR GCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCTGCACCTGGCGATACTaGTGCAGCTTCTCTGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVCTWRY*CSFSGD Trigger: ATCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTGCA...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGTCGATGGCTTCCACCTaGACCTTCGGATTGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLSMAST*TFGLLE Trigger: TTCCAGCAATCCGAAGGTCCAGGTGGAAGCCATCGA...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR CCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCACAGGACCTTCTTCTTaGCGGGGAGAGGCTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVTGPSS*RGEAGL Trigger: CAAACCAGCCTCTCCCCGCCAAGAAGAAGGTCCTGT...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR CCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCTCTGGGGATGAATCCTaGGTCAACTCTGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVSGDES*VNSASS Trigger: GGAGGAGGCAGAGTTGACCCAGGATTCATCCCCAGA...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGCAGCAGGGAGCACAGTaGAAACAGGACCTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLQQGAQ*KQDLLL Trigger: AAGAAGAAGGTCCTGTTTGCACTGTGCTCCCTGCTG...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGATCCTGGGTCAACTCTaGCTCCTCCTCAGCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLILGQL*LLLSKH Trigger: ATGTTTGCTGAGGAGGAGGCAGAGTTGACCCAGGAT...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR GCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCACCTGGCGATACTGCTaGAGCTTCTCTGGGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVTWRYC*SFSGDE Trigger: TTCATCCCCAGAGAAGCTGCAGCAGTATCGCCAGGT...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCGTATCTGATTCCTGGTaGATGCTCTTCTCTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVVSDSW*MLFSGL Trigger: CAACCCAGAGAAGAGCATCCACCAGGAATCAGATAC...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025215.10 |
||
| CDS-3UTR CCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGCCACTCTTGAGTTaGGTGGAACACCTCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVLPLLS*VEHLQD Trigger: ATCCTGGAGGTGTTCCACCCAACTCAAGAGTGGCAG...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025215.10 |
||
| CDS-3UTR CCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCTCGATGGCTTCCACCTaGACCTTCGGATTGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVSMAST*TFGLLE Trigger: TTCCAGCAATCCGAAGGTCCAGGTGGAAGCCATCGA...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGGTCTCCTTTGTATCTaGTTCCTGGTGGATGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MSPEEPTKALTSSIRPVLGLLCI*FLVDAL Trigger: AAGAGCATCCACCAGGAATCAGATACAAAGGAGACC...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025215.10 |
||
| CDS-3UTR TCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCAAACATCTTCTCAGTaGCCAGGTCATAGAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVQTSSQ*PGHRAG Trigger: CCCTGCTCTATGACCTGGTCACTGAGAAGATGTTTG...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 |
||
| CDS-3UTR TCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGAGTTCTGACAGCTaGGGCAGAGAGTTAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVLSSDS*GRELNR Trigger: CCTGTTTAACTCTCTGCCTCAGCTGTCAGAACTCAG...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235619.2 |
||
| CDS-3UTR TCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCTTGAGTTCTGACAGCTaGGGCAGAGAGTTAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVLSSDS*GRELNR Trigger: CCTGTTTAACTCTCTGCCTCAGCTGTCAGAACTCAA...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025215.10 |
||
| CDS-3UTR GCA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCAGCCGAACCATAATCTaGATGTCAGTCTCAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SPEEPTKALTSSIRPVLVSRTII*MSVSRT Trigger: TGTTCTTGAGACTGACATGCAGATTATGGTTCGGCT...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR CCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCGCTCCTCCTCTTCCCTaGTCTCCTTTGTATCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVAPPLP*SPLYLI Trigger: AATCAGATACAAAGGAGACCAGGGAAGAGGAGGAGC...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025215.10 |
||
| CDS-3UTR CCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCGTGGATGCTCTTCTCTaGGTTGGTGAGTGCAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVVDALL*VGECKI Trigger: AATTTTGCACTCACCAACCCAGAGAAGAGCATCCAC...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025215.10 |
||
| CDS-3UTR CCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCTTTGTATCTGATTCCTaGTGGATGCTCTTCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVFVSDS*WMLFSG Trigger: CCCAGAGAAGAGCATCCACCAGGAATCAGATACAAA...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025215.10 |
||
| CDS-3UTR TCA 90 bp | TTGCACACAGTAAATCCACAGTTAACAGCATGCTGCAGCAGAAAGCTGGAATTGAGAGGCCATCCTAGTTaGAGGCAGGTGCTGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHTVNPQLTACCSRKLELRGHPS*RQVLRS Trigger: GCTCCTCAGCACCTGCCTTCAACTAGGATGGCCTCT...CAATTCCAGCTTTCTGCTGCAGCATGCTGTTAACTGTGGATTTACTGTGTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235524.2 ENSMUST00000236007.2 |
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| CDS-3UTR TCA 90 bp | CTTGCACACAGTAAATCCACAGTTAACAGCATGCTGCAGCAGAAAGCTGGAATTAGAGGCCATCCTAGTTaGAGGCAGGTGCTGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAHSKSTVNSMLQQKAGIRGHPS*RQVLRS Trigger: GCTCCTCAGCACCTGCCTTCAACTAGGATGGCCTCT...AATTCCAGCTTTCTGCTGCAGCATGCTGTTAACTGTGGATTTACTGTGTGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235524.2 ENSMUST00000236007.2 |
||
| CDS-3UTR GCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCAGCCGAACCATAATCTaGATGTCAGTCTCAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVSRTII*MSVSRT Trigger: TGTTCTTGAGACTGACATGCAGATTATGGTTCGGCT...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS-3UTR TCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCAAATTATTTGAGTTCTaGCAGCTGAGGCAGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVKLFEF*QLRQRV Trigger: AACTCTCTGCCTCAGCTGTCAGAACTCAAATAATTT...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025215.10 |
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| CDS-3UTR TCA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCTCTTCTCTGGGTTGGTaGGTGCAAAATTATTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LMSPEEPTKALTSSIRPVSSLGW*VQNYLS Trigger: ACTCAAATAATTTTGCACTCACCAACCCAGAGAAGA...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025215.10 |
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| CDS-3UTR TCA 90 bp | ACAGACTTGCACACAGTAAATCCACAGTTAACAGCATGCTGCAGCAGAAAGCTGTTGAGTTCTGACAGCTaGGGCAGAGAGTTAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDLHTVNPQLTACCSRKLLSSDS*GRELNR Trigger: CCTGTTTAACTCTCTGCCTCAGCTGTCAGAACTCAA...CAGCTTTCTGCTGCAGCATGCTGTTAACTGTGGATTTACTGTGTGCAAGTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235524.2 |
||
| CDS-3UTR TCA 90 bp | AGCTGGAATTGTTTATTCACAAATCTGCACACTGCCATACTTCCTGCCATGATGCTGAGTTCTGACAGCTaGGGCAGAGAGTTAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SWNCLFTNLHTAILPAMMLSSDS*GRELNR Trigger: CCTGTTTAACTCTCTGCCTCAGCTGTCAGAACTCAG...CATCATGGCAGGAAGTATGGCAGTGTGCAGATTTGTGAATAAACAATTCCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236007.2 |
||
| CDS-3UTR TCA 90 bp | TTGCACACAGTAAATCCACAGTTAACAGCATGCTGCAGCAGAAAGCTGGAATTGTCTTCCATAAGATGCTaGGTTCTGACAGCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHTVNPQLTACCSRKLELSSIRC*VLTAEA Trigger: TGCCTCAGCTGTCAGAACTCAGCATCTTATGGAAGA...CAATTCCAGCTTTCTGCTGCAGCATGCTGTTAACTGTGGATTTACTGTGTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236007.2 |
||
| CDS-3UTR TCA 90 bp | AACAGACTTGCACACAGTAAATCCACAGTTAACAGCATGCTGCAGCAGAAAGCTTCACAAATTGAGTTCTaGCAGCTGAGGCAGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NRLAHSKSTVNSMLQQKASQIEF*QLRQRV Trigger: AACTCTCTGCCTCAGCTGTCAGAACTCAATTTGTGA...AGCTTTCTGCTGCAGCATGCTGTTAACTGTGGATTTACTGTGTGCAAGTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235524.2 |
||
| 3UTR CAA 72 bp | CCACAGTTAACAGCATGCTGCAGCAGAAAGCTGGAATaGTTTATTCACAAATCTGCACACTGCCATACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PQLTACCSRKLE*FIHKSAHCHTS Trigger: GGAAGTATGGCAGTGTGCAGATTTGTGAATAAACAATTCCAGCTTTCTGCTGCAGCATGCTGTTAACTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236007.2 |
||
| CDS TCA 90 bp | CACGCACGGCCAGTACCTTCGCACTCTTCTCCTGTACCAGGCTCCTaGGGACCTGCAGGCCCCCGAGCTTCAGGAACTGCTGCTGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HARPVPSHSSPVPGS*GPAGPRASGTAAGH Trigger: ATGCCCAGCAGCAGTTCCTGAAGCTCGGGGGCCTGCAGGTCCTCAGGAGCCTGGTACAGGAGAAGAGTGCGAAGGTACTGGCCGTGCGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 |
||
| CDS TCA 90 bp | CCTTCTCCCGAGCATCATGCTCTGGAAGGGCCAGGAGCTGGGCGGTaGTCTCACACCAACCCTGTTCCTGCAGGCCTGGCAGGAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSPEHHALEGPGAGR*SHTNPVPAGLAGAA Trigger: TGCAGCTCCTGCCAGGCCTGCAGGAACAGGGTTGGTGTGAGATCACCGCCCAGCTCCTGGCCCTTCCAGAGCATGATGCTCGGGAGAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS GCA 90 bp | GGGAGGCCAGGGCTTGGTACTCTGCTTGGAGACGCCCTAGTGTCCTaGTCAACTGGAGGTCCTGACGGTAGCGATCCCGGCAGGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRPGLGTLLGDALVS*STGGPDGSDPGRWS Trigger: TGACCACCTGCCGGGATCGCTACCGTCAGGACCTCCAGTTGAGCAGGACACTAGGGCGTCTCCAAGCAGAGTACCAAGCCCTGGCCTCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS CCA 90 bp | TGCAGCACCTTCTCCCGAGCATCATGCTCTGGAAGGGCCAGGAGCTaGGCGGTGATCTCACACCAACCCTGTTCCTGCAGGCCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CSTFSRASCSGRARS*AVISHQPCSCRPGR Trigger: CCTGCCAGGCCTGCAGGAACAGGGTTGGTGTGAGATCACCGCCCAGCTCCTGGCCCTTCCAGAGCATGATGCTCGGGAGAAGGTGCTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS GCA 90 bp | TTGGCGGGGAGAGGCTGGTTTGTGGCCAGGATGACCAGCAGCTTCTaGAGGGCTCCCCCTTCGATGGCTTCCACCTGGACCTTCGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: LAGRGWFVARMTSSF*RAPPSMASTWTFGL Trigger: CAATCCGAAGGTCCAGGTGGAAGCCATCGAAGGGGGAGCCCTGCAGAAGCTGCTGGTCATCCTGGCCACAAACCAGCCTCTCCCCGCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS GCA 90 bp | CCCTGTTCCTGCAGGCCTGGCAGGAGCTGCACCTGGCGATACTGCTaGAGCTTCTCTGGGGATGAATCCTGGGTCAACTCTGCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PCSCRPGRSCTWRYC*SFSGDESWVNSASS Trigger: GGAGGAGGCAGAGTTGACCCAGGATTCATCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTGCAGCTCCTGCCAGGCCTGCAGGAACAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS GCA 90 bp | CAACCCTGTTCCTGCAGGCCTGGCAGGAGCTGCACCTGGCGATACTaGTGCAGCTTCTCTGGGGATGAATCCTGGGTCAACTCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QPCSCRPGRSCTWRY*CSFSGDESWVNSAS Trigger: GGAGGCAGAGTTGACCCAGGATTCATCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTGCAGCTCCTGCCAGGCCTGCAGGAACAGGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS GCA 90 bp | GCGGTGATCTCACACCAACCCTGTTCCTGCAGGCCTGGCAGGAGCTaGACCTGGCGATACTGCTGCAGCTTCTCTGGGGATGAATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVISHQPCSCRPGRS*TWRYCCSFSGDESW Trigger: CCAGGATTCATCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTGCAGCTCCTGCCAGGCCTGCAGGAACAGGGTTGGTGTGAGATCACCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS TCA 90 bp | CCTCCTCAGCAAACATCTTCGCACTCTTCTCCTGTACCAGGCTCCTaGGGACCTGCAGGCCCCCGAGCTTCAGGAACTGCTGCTGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PPQQTSSHSSPVPGS*GPAGPRASGTAAGH Trigger: ATGCCCAGCAGCAGTTCCTGAAGCTCGGGGGCCTGCAGGTCCTCAGGAGCCTGGTACAGGAGAAGAGTGCGAAGATGTTTGCTGAGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237896.2 |
||
| CDS CCA 90 bp | ATCTCACACCAACCCTGTTCCTGCAGGCCTGGCAGGAGCTGCACCTaGCGATACTGCTGCAGCTTCTCTGGGGATGAATCCTGGGTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISHQPCSCRPGRSCT*RYCCSFSGDESWVN Trigger: GTTGACCCAGGATTCATCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTGCAGCTCCTGCCAGGCCTGCAGGAACAGGGTTGGTGTGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCATCATCTTCGCCTTCTaGGAGCTCCAGGGAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPEEPTKALTSSIRPVLVIIFAF*ELQGGQ Trigger: CTGGCCTCCCTGGAGCTCCAAGAAGGCGAAGATGAT...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCTCTGCCACTCTTGAGTaGGGTGGAACACCTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPEEPTKALTSSIRPVLVSATLE*GGTPPG Trigger: TCCTGGAGGTGTTCCACCCAACTCAAGAGTGGCAGA...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025215.10 |
||
| CDS-3UTR CAA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCAAGGGTCTGCCACTCTaGAGTTGGGTGGAACACCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPEEPTKALTSSIRPVLVKGLPL*SWVEHL Trigger: GAGGTGTTCCACCCAACTCAAGAGTGGCAGACCCTT...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025215.10 |
||
| CDS-3UTR CAA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCGTCCCCTCCTTGAATTaGGCCAGCGCACTCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LMSPEEPTKALTSSIRPVVPSLN*ASALLR Trigger: CCTCAAGAGTGCGCTGGCCAAATTCAAGGAGGGGAC...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR CAA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCATCATCTTCGCCTTCTaGGAGCTCCAGGGAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LMSPEEPTKALTSSIRPVIIFAF*ELQGGQ Trigger: CTGGCCTCCCTGGAGCTCCAAGAAGGCGAAGATGAT...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCTCCTTCATCAAGCTGTaGATGGAGGCCAGCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPEEPTKALTSSIRPVLVSFIKL*MEASSS Trigger: GGAACTGCTGGCCTCCATCAACAGCTTGATGAAGGA...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS TCA 90 bp | GCGGAAGAGCTGCTTGACTGTGGCCTGTCTCGCCAGTTCATCCTTTaGATTCTCCATCTCGGTCCCCTCCTTGAATTTGGCCAGCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: AEELLDCGLSRQFIL*ILHLGPLLEFGQRT Trigger: AGTGCGCTGGCCAAATTCAAGGAGGGGACCGAGATGGAGAATTCAAAGGATGAACTGGCGAGACAGGCCACAGTCAAGCAGCTCTTCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCCCCATTAATCACCACTaGAAGGCCACCAAAGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: SPEEPTKALTSSIRPVLVPINHH*KATKGQ Trigger: CTGTCCTTTGGTGGCCTTCAAGTGGTGATTAATGGG...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR CAA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCAACAGGACCTTCTTCTaGGCGGGGAGAGGCTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LMSPEEPTKALTSSIRPVNRTFF*AGRGWF Trigger: AAACCAGCCTCTCCCCGCCAAGAAGAAGGTCCTGTT...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGTCGCCAGTTCATCCTTaGAATTCTCCATCTCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: MSPEEPTKALTSSIRPVLSPVHP*NSPSRS Trigger: GGACCGAGATGGAGAATTCAAAGGATGAACTGGCGA...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGCTGGAGCTGGAGCTGTaGAACTTGTTTATCAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: MSPEEPTKALTSSIRPVLLELEL*NLFISR Trigger: TCGGCTGATAAACAAGTTCAACAGCTCCAGCTCCAG...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGCCCATTAATCACCACTaGAAGGCCACCAAAGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: MSPEEPTKALTSSIRPVLPINHH*KATKGQ Trigger: CTGTCCTTTGGTGGCCTTCAAGTGGTGATTAATGGG...CAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR CAA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCTCCTTCATCAAGCTGTaGATGGAGGCCAGCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LMSPEEPTKALTSSIRPVSFIKL*MEASSS Trigger: GGAACTGCTGGCCTCCATCAACAGCTTGATGAAGGA...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS TCA 90 bp | ATCTCGGTCCCCTCCTTGAATTTGGCCAGCGCACTCTTGAGGTCCTaGGATGTGTATGTGTTGGCGTTGATGTCCAGCCTTCTGCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ISVPSLNLASALLRS*DVYVLALMSSLLPL Trigger: AAGAGGCAGAAGGCTGGACATCAACGCCAACACATACACATCTCAGGACCTCAAGAGTGCGCTGGCCAAATTCAAGGAGGGGACCGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 |
||
| CDS-3UTR CAA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCTCGCCAGTTCATCCTTaGAATTCTCCATCTCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LMSPEEPTKALTSSIRPVSPVHP*NSPSRS Trigger: GGACCGAGATGGAGAATTCAAAGGATGAACTGGCGA...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR CAA 90 bp | TTGATGTCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGAGCTGGAGCTGTaGAACTTGTTTATCAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LMSPEEPTKALTSSIRPVLELEL*NLFISR Trigger: TCGGCTGATAAACAAGTTCAACAGCTCCAGCTCCAG...GACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGACATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS GCA 90 bp | AGCTCATCAAATTCCTTCTTCAGCTCCTCAATGGGGCGGAAGAGCTaGTTGACTGTGGCCTGTCTCGCCAGTTCATCCTTTGAATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSNSFFSSSMGRKS*LTVACLASSSFEFS Trigger: GGAGAATTCAAAGGATGAACTGGCGAGACAGGCCACAGTCAAGCAGCTCTTCCGCCCCATTGAGGAGCTGAAGAAGGAATTTGATGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCATGCTCTTCTCTGGGTaGGTGAGTGCAAAATTATTT | + |
|
Preference number: 5 (lower is better) Translates to: SPEEPTKALTSSIRPVLVMLFSG*VSAKLF Trigger: AAATAATTTTGCACTCACCAACCCAGAGAAGAGCAT...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025215.10 |
||
| CDS-3UTR CAA 90 bp | TCCCCTGAAGAGCCCACCAAAGCTCTCACTAGCAGCATCCGTCCAGTCCTGGTCTTGAAATTTGTCTTCTaGTTGGAGCTTCACCTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SPEEPTKALTSSIRPVLVLKFVF*LELHLV Trigger: AACGAGGTGAAGCTCCAACAAGAAGACAAATTTCAA...GACCAGGACTGGACGGATGCTGCTAGTGAGAGCTTTGGTGGGCTCTTCAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 |
||
| CDS TCA 90 bp | CATCAAATTCCTTCTTCAGCTCCTCAATGGGGCGGAAGAGCTGCTTaGCTGTGGCCTGTCTCGCCAGTTCATCCTTTGAATTCTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: HQIPSSAPQWGGRAA*LWPVSPVHPLNSPS Trigger: AGATGGAGAATTCAAAGGATGAACTGGCGAGACAGGCCACAGTCAAGCAGCTCTTCCGCCCCATTGAGGAGCTGAAGAAGGAATTTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS TCA 90 bp | AAAACTCCCAACAGACTCTTCCATAAGATGCTGAGTTCTGACAGCTaGGGCAGAGAGTTAAACAGGAAGTCAACAGCAGCCCCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KTPNRLFHKMLSSDS*GRELNRKSTAAPAA Trigger: TGCTGCTGGGGCTGCTGTTGACTTCCTGTTTAACTCTCTGCCTCAGCTGTCAGAACTCAGCATCTTATGGAAGAGTCTGTTGGGAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236007.2 |
||
| CDS-3UTR CAA 90 bp | AATCTGCTTTCCCATAAAACCTGGAGTCAGAGACTTTCTTCATTCCCCTTGGCCCTGGAGCTGGAGCTGTaGAACTTGTTTATCAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: NLLSHKTWSQRLSSFPLALELEL*NLFISR Trigger: TCGGCTGATAAACAAGTTCAACAGCTCCAGCTCCAG...GGCCAAGGGGAATGAAGAAAGTCTCTGACTCCAGGTTTTATGGGAAAGCAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237309.2 |
||
| CDS-3UTR CAA 90 bp | AATCTGCTTTCCCATAAAACCTGGAGTCAGAGACTTTCTTCATTCCCCTTGGCCCCCATTAATCACCACTaGAAGGCCACCAAAGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: NLLSHKTWSQRLSSFPLAPINHH*KATKGQ Trigger: CTGTCCTTTGGTGGCCTTCAAGTGGTGATTAATGGG...GGCCAAGGGGAATGAAGAAAGTCTCTGACTCCAGGTTTTATGGGAAAGCAGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237309.2 |
||
| CDS GCA 90 bp | CTGGAGCTGGAGCTGTTGAACTTGTTTATCAGCCGAACCATAATCTaGATGTCAGTCTCAAGAACAACGTTCAGCTCATCAAATTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LELELLNLFISRTII*MSVSRTTFSSSNSF Trigger: GAAGGAATTTGATGAGCTGAACGTTGTTCTTGAGACTGACATGCAGATTATGGTTCGGCTGATAAACAAGTTCAACAGCTCCAGCTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237309.2 ENSMUST00000237896.2 |
||
| CDS TCA 72 bp | GAGCATCATGCTCTGGAAGGGCCAGGAGCTGGGCGGTaGTCTCACACCAACCCTGTTCCTGCAGGCCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: EHHALEGPGAGR*SHTNPVPAGLA Trigger: TGCCAGGCCTGCAGGAACAGGGTTGGTGTGAGATCACCGCCCAGCTCCTGGCCCTTCCAGAGCATGATGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS GCA 72 bp | AGAGGCTGGTTTGTGGCCAGGATGACCAGCAGCTTCTaGAGGGCTCCCCCTTCGATGGCTTCCACCTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: RGWFVARMTSSF*RAPPSMASTWT Trigger: GGTCCAGGTGGAAGCCATCGAAGGGGGAGCCCTGCAGAAGCTGCTGGTCATCCTGGCCACAAACCAGCCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS GCA 72 bp | GGGCTTGGTACTCTGCTTGGAGACGCCCTAGTGTCCTaGTCAACTGGAGGTCCTGACGGTAGCGATCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLGTLLGDALVS*STGGPDGSDPG Trigger: GCCGGGATCGCTACCGTCAGGACCTCCAGTTGAGCAGGACACTAGGGCGTCTCCAAGCAGAGTACCAAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS CCA 72 bp | TGGAGCTCCAGGGAGGCCAGGGCTTGGTACTCTGCTTaGAGACGCCCTAGTGTCCTGCTCAACTGGAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WSSREARAWYSA*RRPSVLLNWRS Trigger: GGACCTCCAGTTGAGCAGGACACTAGGGCGTCTCCAAGCAGAGTACCAAGCCCTGGCCTCCCTGGAGCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS TCA 72 bp | CCAGTACCTTCGCACTCTTCTCCTGTACCAGGCTCCTaGGGACCTGCAGGCCCCCGAGCTTCAGGAACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PVPSHSSPVPGS*GPAGPRASGTA Trigger: AGCAGTTCCTGAAGCTCGGGGGCCTGCAGGTCCTCAGGAGCCTGGTACAGGAGAAGAGTGCGAAGGTACTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 |
||
| CDS GCA 72 bp | TCCTGCAGGCCTGGCAGGAGCTGCACCTGGCGATACTaGTGCAGCTTCTCTGGGGATGAATCCTGGGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SCRPGRSCTWRY*CSFSGDESWVN Trigger: GTTGACCCAGGATTCATCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTGCAGCTCCTGCCAGGCCTGCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS CCA 72 bp | TTCTCCCGAGCATCATGCTCTGGAAGGGCCAGGAGCTaGGCGGTGATCTCACACCAACCCTGTTCCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FSRASCSGRARS*AVISHQPCSCR Trigger: CCTGCAGGAACAGGGTTGGTGTGAGATCACCGCCCAGCTCCTGGCCCTTCCAGAGCATGATGCTCGGGAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS CCA 72 bp | CAGTGTCTGCAGCACCTTCTCCCGAGCATCATGCTCTaGAAGGGCCAGGAGCTGGGCGGTGATCTCACACCA | + |
|
Preference number: 6 (lower is better) Translates to: QCLQHLLPSIML*KGQELGGDLTP Trigger: TGGTGTGAGATCACCGCCCAGCTCCTGGCCCTTCCAGAGCATGATGCTCGGGAGAAGGTGCTGCAGACACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS CCA 72 bp | TCTTCGCCTTCTTGGAGCTCCAGGGAGGCCAGGGCTTaGTACTCTGCTTGGAGACGCCCTAGTGTCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSPSWSSREARA*YSAWRRPSVLL Trigger: GAGCAGGACACTAGGGCGTCTCCAAGCAGAGTACCAAGCCCTGGCCTCCCTGGAGCTCCAAGAAGGCGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS GCA 72 bp | TGCAGGCCTGGCAGGAGCTGCACCTGGCGATACTGCTaGAGCTTCTCTGGGGATGAATCCTGGGTCAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: CRPGRSCTWRYC*SFSGDESWVNS Trigger: AGAGTTGACCCAGGATTCATCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTGCAGCTCCTGCCAGGCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS CAA 72 bp | CAGCAGTTCCCGGAAGTAGCCATCATCTTCGCCTTCTaGGAGCTCCAGGGAGGCCAGGGCTTGGTACTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QQFPEVAIIFAF*ELQGGQGLVLC Trigger: GCAGAGTACCAAGCCCTGGCCTCCCTGGAGCTCCAAGAAGGCGAAGATGATGGCTACTTCCGGGAACTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS TCA 72 bp | CAAACATCTTCGCACTCTTCTCCTGTACCAGGCTCCTaGGGACCTGCAGGCCCCCGAGCTTCAGGAACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QTSSHSSPVPGS*GPAGPRASGTA Trigger: AGCAGTTCCTGAAGCTCGGGGGCCTGCAGGTCCTCAGGAGCCTGGTACAGGAGAAGAGTGCGAAGATGTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237896.2 |
||
| CDS CAA 90 bp | CTGCAGGAACAGCCTGACCTGGTTGAAGGGTCTGCCACTCTTGAGTaGGGTGGAACACCTCCAGGATCTCGGTGTCTAGCTCCTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LQEQPDLVEGSATLE*GGTPPGSRCLAPPL Trigger: AAGAGGAGGAGCTAGACACCGAGATCCTGGAGGTGTTCCACCCAACTCAAGAGTGGCAGACCCTTCAACCAGGTCAGGCTGTTCCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025215.10 |
||
| CDS TCA 72 bp | CTGCACCTGGCGATACTGCTGCAGCTTCTCTGGGGATaGATCCTGGGTCAACTCTGCCTCCTCCTCAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LHLAILLQLLWG*ILGQLCLLLSK Trigger: TTTGCTGAGGAGGAGGCAGAGTTGACCCAGGATTCATCCCCAGAGAAGCTGCAGCAGTATCGCCAGGTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS CAA 72 bp | CAGGGGTTCTGTGCTGTTGAGCCCATTAATCACCACTaGAAGGCCACCAAAGGACAGCAGGTCCTGTGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: QGFCAVEPINHH*KATKGQQVLCV Trigger: AACGCACAGGACCTGCTGTCCTTTGGTGGCCTTCAAGTGGTGATTAATGGGCTCAACAGCACAGAACCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237309.2 ENSMUST00000237896.2 |
||
| CDS CAA 90 bp | CTCCTTCACCAGGGGTTCTGTGCTGTTGAGCCCATTAATCACCACTaGAAGGCCACCAAAGGACAGCAGGTCCTGTGCGTTATCCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLHQGFCAVEPINHH*KATKGQQVLCVIHL Trigger: CAGATGGATAACGCACAGGACCTGCTGTCCTTTGGTGGCCTTCAAGTGGTGATTAATGGGCTCAACAGCACAGAACCCCTGGTGAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237309.2 ENSMUST00000237896.2 |
||
| CDS TCA 72 bp | CCCTCCTTGAATTTGGCCAGCGCACTCTTGAGGTCCTaGGATGTGTATGTGTTGGCGTTGATGTCCAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PSLNLASALLRS*DVYVLALMSSL Trigger: AAGGCTGGACATCAACGCCAACACATACACATCTCAGGACCTCAAGAGTGCGCTGGCCAAATTCAAGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 |
||
| CDS TCA 72 bp | CTGCTTGACTGTGGCCTGTCTCGCCAGTTCATCCTTTaGATTCTCCATCTCGGTCCCCTCCTTGAATTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLDCGLSRQFIL*ILHLGPLLEFG Trigger: GCCAAATTCAAGGAGGGGACCGAGATGGAGAATTCAAAGGATGAACTGGCGAGACAGGCCACAGTCAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS GCA 72 bp | AATTCCTTCTTCAGCTCCTCAATGGGGCGGAAGAGCTaGTTGACTGTGGCCTGTCTCGCCAGTTCATCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: NSFFSSSMGRKS*LTVACLASSSF Trigger: AAAGGATGAACTGGCGAGACAGGCCACAGTCAAGCAGCTCTTCCGCCCCATTGAGGAGCTGAAGAAGGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
||
| CDS CAA 90 bp | TCATCAAATTCCTTCTTCAGCTCCTCAATGGGGCGGAAGAGCTGCTaGACTGTGGCCTGTCTCGCCAGTTCATCCTTTGAATTCTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SSNSFFSSSMGRKSC*TVACLASSSFEFSI Trigger: GATGGAGAATTCAAAGGATGAACTGGCGAGACAGGCCACAGTCAAGCAGCTCTTCCGCCCCATTGAGGAGCTGAAGAAGGAATTTGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237896.2 |
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| CDS TCA 72 bp | AACAGACTCTTCCATAAGATGCTGAGTTCTGACAGCTaGGGCAGAGAGTTAAACAGGAAGTCAACAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: NRLFHKMLSSDS*GRELNRKSTAA Trigger: GGCTGCTGTTGACTTCCTGTTTAACTCTCTGCCTCAGCTGTCAGAACTCAGCATCTTATGGAAGAGTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236007.2 |
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| CDS TCA 72 bp | TTCTCTGGGTTGGTGAGTGCAAAATTATTTGAGTTCTaGCAGCTGAGGCAGAGAGTTAAACAGGAAGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: FSGLVSAKLFEF*QLRQRVKQEVN Trigger: GTTGACTTCCTGTTTAACTCTCTGCCTCAGCTGTCAGAACTCAAATAATTTTGCACTCACCAACCCAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025215.10 ENSMUST00000237232.2 |
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| CDS GCA 72 bp | GAGCTGTTGAACTTGTTTATCAGCCGAACCATAATCTaGATGTCAGTCTCAAGAACAACGTTCAGCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: ELLNLFISRTII*MSVSRTTFSSS Trigger: TGATGAGCTGAACGTTGTTCTTGAGACTGACATGCAGATTATGGTTCGGCTGATAAACAAGTTCAACAGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025215.10 ENSMUST00000235619.2 ENSMUST00000237309.2 ENSMUST00000237896.2 |
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