Pregenerated sensors for SIKE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027854Ensembl transcript IDs: ENSMUST00000029447.12, ENSMUST00000119450.2, ENSMUST00000197601.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGTGCATGATGGGGCAGGCCCAAGTTCCTCAGCACTCTCTGAATaGCTGTGGATCCTTGAGGAGGAGGAGGAGCAACGCGAACCCGGC | + |
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Preference number: 1 (lower is better) Translates to: PVHDGAGPSSSALSE*LWILEEEEEQREPG Trigger: GCCGGGTTCGCGTTGCTCCTCCTCCTCCTCAAGGATCCACAGTCATTCAGAGAGTGCTGAGGAACTTGGGCCTGCCCCATCATGCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR CCA 90 bp | CACAGCTGCCTGCTAGCACTCCAGACCTGCTCTGCTGCTCTTCTATaGAGCCAAACCCAGCAGCAGCCTGTGTTGCTGGTCCCCAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: HSCLLALQTCSAALL*SQTQQQPVLLVPRF Trigger: GAACCTGGGGACCAGCAACACAGGCTGCTGCTGGGTTTGGCTCCATAGAAGAGCAGCAGAGCAGGTCTGGAGTGCTAGCAGGCAGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR GCA 90 bp | CTGGGTCTTCCACAGCTGCCTGCTAGCACTCCAGACCTGCTCTGCTaGTCTTCTATGGAGCCAAACCCAGCAGCAGCCTGTGTTGCTGGT | + |
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Preference number: 1 (lower is better) Translates to: LGLPQLPASTPDLLC*SSMEPNPAAACVAG Trigger: ACCAGCAACACAGGCTGCTGCTGGGTTTGGCTCCATAGAAGAGCAGCAGAGCAGGTCTGGAGTGCTAGCAGGCAGCTGTGGAAGACCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR GCA 90 bp | ACACTGGGTCTTCCACAGCTGCCTGCTAGCACTCCAGACCTGCTCTaGTGCTCTTCTATGGAGCCAAACCCAGCAGCAGCCTGTGTTGCT | + |
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Preference number: 1 (lower is better) Translates to: TLGLPQLPASTPDLL*CSSMEPNPAAACVA Trigger: AGCAACACAGGCTGCTGCTGGGTTTGGCTCCATAGAAGAGCAGCAGAGCAGGTCTGGAGTGCTAGCAGGCAGCTGTGGAAGACCCAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR CCA 90 bp | CTGCTGCTCTTCTATGGAGCCAAACCCAGCAGCAGCCTGTGTTGCTaGTCCCCAGGTTCAGAGGTTTCTGTGTGGCTCCCAGCTTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: LLLFYGAKPSSSLCC*SPGSEVSVWLPALP Trigger: TGGCAAAGCTGGGAGCCACACAGAAACCTCTGAACCTGGGGACCAGCAACACAGGCTGCTGCTGGGTTTGGCTCCATAGAAGAGCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR CCA 90 bp | CCAGCTCTCCTGTGGTCAGCTGGGAGGGGGAGACAGGAGAAACTTTaGAAGGTCAGGAGGCAGCTAGCCTGGTGTATGTATACAGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: PALLWSAGRGRQEKL*KVRRQLAWCMYTGG Trigger: TCCTCCTGTATACATACACCAGGCTAGCTGCCTCCTGACCTTCCAAAGTTTCTCCTGTCTCCCCCTCCCAGCTGACCACAGGAGAGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR GCA 90 bp | CATCACAGACGGAGCCAACGTGGAAAAAGGCACCCTGTGCAGAAATaGACCCTTCCCTCCACACTGAGGACCACTCACAGGCACAGCATT | + |
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Preference number: 1 (lower is better) Translates to: HHRRSQRGKRHPVQK*TLPSTLRTTHRHSI Trigger: AATGCTGTGCCTGTGAGTGGTCCTCAGTGTGGAGGGAAGGGTGCATTTCTGCACAGGGTGCCTTTTTCCACGTTGGCTCCGTCTGTGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR GCA 90 bp | GCCTTCACCGTAGACCAGGCTAGAACTCAGAGATCGGTGGGCCTCTaGCTCTCTCCTGCTGGGATTAAAGCATGCCTTTTTGTTTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: AFTVDQARTQRSVGL*LSPAGIKACLFVCL Trigger: CAAACAAACAAAAAGGCATGCTTTAATCCCAGCAGGAGAGAGGCAGAGGCCCACCGATCTCTGAGTTCTAGCCTGGTCTACGGTGAAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR TCA 90 bp | GAGGAATTGATTTTGAATCCCCAGAACCTGCACAATATAGGCAGGTaGGGTATCAACACAGCTGGGACCCAGCTCTCCTGTGGTCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: EELILNPQNLHNIGR*GINTAGTQLSCGQL Trigger: CAGCTGACCACAGGAGAGCTGGGTCCCAGCTGTGTTGATACCTCACCTGCCTATATTGTGCAGGTTCTGGGGATTCAAAATCAATTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR GCA 90 bp | TCACTAGGTAAACCTGCATGTCCTCGAATTCAAGAGATGTGCCTCTaGCTTCCAAGTGCTGGGATTGCAGGTGTACATCGCCACTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: SLGKPACPRIQEMCL*LPSAGIAGVHRHCS Trigger: TGAGCAGTGGCGATGTACACCTGCAATCCCAGCACTTGGAAGGCAGAGGCACATCTCTTGAATTCGAGGACATGCAGGTTTACCTAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR TCA 90 bp | CAGGAGCCACAGAGCTTTCTTTTCCAACCTGCAGAGATTCACTGCTaGTGGACAGTAACTCTCGAAGTTCCTTATTTTCAAGCTCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: QEPQSFLFQPAEIHC*WTVTLEVPYFQAPA Trigger: AGCTGGAGCTTGAAAATAAGGAACTTCGAGAGTTACTGTCCATCAGCAGTGAATCTCTGCAGGTTGGAAAAGAAAGCTCTGTGGCTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197601.2 |
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| 3UTR CCA 90 bp | GTATGTATACAGGAGGAAACAAGAGACTTTTCAGCTGACAAGGACTaGCACCTGAGGCTACTAGCCTCTAACCTCTACATGTACACCATG | + |
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Preference number: 1 (lower is better) Translates to: VCIQEETRDFSADKD*HLRLLASNLYMYTM Trigger: CATGGTGTACATGTAGAGGTTAGAGGCTAGTAGCCTCAGGTGCCAGTCCTTGTCAGCTGAAAAGTCTCTTGTTTCCTCCTGTATACATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR TCA 90 bp | GACCCTAACTGTTCTGGGACTCAATATGTAGATCAGGCTCATCTCTaGACTCATAGAAATCTATCTGCTGCTAACTCCAGCCAGAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: DPNCSGTQYVDQAHL*THRNLSAANSSQSA Trigger: AGCACTCTGGCTGGAGTTAGCAGCAGATAGATTTCTATGAGTTCAGAGATGAGCCTGATCTACATATTGAGTCCCAGAACAGTTAGGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR CCA 90 bp | GAGGAGCAACGCGAACCCGGCTTACTTGTTTTCAAGCGTATTTCCTaGGGACTAATAGATTCTCTCAAATTAAGAGCAAAGACACCTGAC | + |
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Preference number: 1 (lower is better) Translates to: EEQREPGLLVFKRIS*GLIDSLKLRAKTPD Trigger: GTCAGGTGTCTTTGCTCTTAATTTGAGAGAATCTATTAGTCCCCAGGAAATACGCTTGAAAACAAGTAAGCCGGGTTCGCGTTGCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR GCA 90 bp | CTAATGGCCATTTTCTTTCTCAGGATCACATTTAGGACTGTCCACTaGCTTTATCCACAGTCCTCAGTCTACGGTAGTTCTCCAATCTCT | + |
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Preference number: 1 (lower is better) Translates to: LMAIFFLRITFRTVH*LYPQSSVYGSSPIS Trigger: AGAGATTGGAGAACTACCGTAGACTGAGGACTGTGGATAAAGGCAGTGGACAGTCCTAAATGTGATCCTGAGAAAGAAAATGGCCATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR TCA 90 bp | AACATTGAACTGCAGGTAACAGTTTATAGAGATTCCGGACTAGAGTaGCAAATGTCATCTCTGTCCCAGCAATGGGGGACTTGTCTAGTT | + |
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Preference number: 1 (lower is better) Translates to: NIELQVTVYRDSGLE*QMSSLSQQWGTCLV Trigger: AACTAGACAAGTCCCCCATTGCTGGGACAGAGATGACATTTGTCACTCTAGTCCGGAATCTCTATAAACTGTTACCTGCAGTTCAATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
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| 3UTR CCA 90 bp | CCCCTGGATCTAGAATTACAATTGATTGTGAGCTGCCTGATGTGTTaGGAATCAAACTTGAGTCCTCTGCAAGAGCAGCATATTCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: PLDLELQLIVSCLMC*ESNLSPLQEQHILL Trigger: TAAGAGAATATGCTGCTCTTGCAGAGGACTCAAGTTTGATTCCCAACACATCAGGCAGCTCACAATCAATTGTAATTCTAGATCCAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR CAA 90 bp | GGGCAGGCCCAAGTTCCTCAGCACTCTCTGAATGACTGTGGATCCTaGAGGAGGAGGAGGAGCAACGCGAACCCGGCTTACTTGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: GQAQVPQHSLNDCGS*RRRRSNANPAYLFS Trigger: TGAAAACAAGTAAGCCGGGTTCGCGTTGCTCCTCCTCCTCCTCAAGGATCCACAGTCATTCAGAGAGTGCTGAGGAACTTGGGCCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR GCA 90 bp | AGGCATGTGCCACCATGCCCAATTTATCTGCTGCTATCGGGCAGGCAGCATAGACCATCCCAGTGGTGCTaGTCTGCACAGCACAGCACA | + |
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Preference number: 2 (lower is better) Translates to: RHVPPCPIYLLLSGRQHRPSQWC*SAQHST Trigger: TGTGCTGTGCTGTGCAGAGCAGCACCACTGGGATGG...TCTATGCTGCCTGCCCGATAGCAGCAGATAAATTGGGCATGGTGGCACATGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR TCA 90 bp | AGGCATGTGCCACCATGCCCAATTTATCTGCTGCTATCGGGCAGGCAGCATAGAATGACTGTGGATCCTTaGGGAGGAGGAGGAGCAACG | + |
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Preference number: 2 (lower is better) Translates to: RHVPPCPIYLLLSGRQHRMTVDP*GGGGAT Trigger: CGTTGCTCCTCCTCCTCCTCAAGGATCCACAGTCAT...TCTATGCTGCCTGCCCGATAGCAGCAGATAAATTGGGCATGGTGGCACATGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGGTCAGGAGGCAGCTAGCCTGGTGTATGTATACAGGAGGAAACAAGAGACCTGCCTCTACCTCCTaGGTGCTGGGATTAAAGGCG | + |
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Preference number: 2 (lower is better) Translates to: WKVRRQLAWCMYTGGNKRPASTS*VLGLKA Trigger: CGCCTTTAATCCCAGCACTCAGGAGGTAGAGGCAGG...TCTCTTGTTTCCTCCTGTATACATACACCAGGCTAGCTGCCTCCTGACCTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR TCA 90 bp | AAGACAGGGTCTCCCTGTGTAGTCTCCTGGGACTCACTAGGTAAACCTGCATGTACAGCTGTGTGTCCATaGAAGTGCCTAGGAGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: KTGSPCVVSWDSLGKPACTAVCP*KCLGAR Trigger: CCTAGCTCCTAGGCACTTTCATGGACACACAGCTGT...ACATGCAGGTTTACCTAGTGAGTCCCAGGAGACTACACAGGGAGACCCTGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR GCA 90 bp | GCTAGCACTCCAGACCTGCTCTGCTGCTCTTCTATGGAGCCAAACCCAGCAGCAGATTTCTGCTCTTCCTaGTTCTGCTCCAAATTCTGG | + |
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Preference number: 2 (lower is better) Translates to: ASTPDLLCCSSMEPNPAADFCSS*FCSKFW Trigger: CCAGAATTTGGAGCAGAAGCAGGAAGAGCAGAAATC...TGCTGCTGGGTTTGGCTCCATAGAAGAGCAGCAGAGCAGGTCTGGAGTGCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGAGAGTGGATATAGAAGGACAGGGAGATGAGTGGGATTGGGTTATAAGCTCTAATAGCTCCCTGTaGATGATGGGGCAGGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: GQRVDIEGQGDEWDWVISSNSSL*MMGQAQ Trigger: TTGGGCCTGCCCCATCATGCACAGGGAGCTATTAGA...GCTTATAACCCAATCCCACTCATCTCCCTGTCCTTCTATATCCACTCTCTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR GCA 90 bp | GCTAGCACTCCAGACCTGCTCTGCTGCTCTTCTATGGAGCCAAACCCAGCAGCATGTGGCTCCCAGCTTTaGCATATCACTAACTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: ASTPDLLCCSSMEPNPAACGSQL*HITNFE Trigger: TTCAAAGTTAGTGATATGGCAAAGCTGGGAGCCACA...TGCTGCTGGGTTTGGCTCCATAGAAGAGCAGCAGAGCAGGTCTGGAGTGCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGAGAGTGGATATAGAAGGACAGGGAGATGAGTGGGATTGGGTTATAAGCGTCTCCAGTCTCCACTaGATACACTGGGTCTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: GQRVDIEGQGDEWDWVISVSSLH*IHWVFH Trigger: GTGGAAGACCCAGTGTATGCAGTGGAGACTGGAGAC...GCTTATAACCCAATCCCACTCATCTCCCTGTCCTTCTATATCCACTCTCTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR CCA 90 bp | AGGCATGTGCCACCATGCCCAATTTATCTGCTGCTATCGGGCAGGCAGCATAGATCTCTGTCCCAGCAATaGGGGACTTGTCTAGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: RHVPPCPIYLLLSGRQHRSLSQQ*GTCLVS Trigger: TGAAACTAGACAAGTCCCCCATTGCTGGGACAGAGA...TCTATGCTGCCTGCCCGATAGCAGCAGATAAATTGGGCATGGTGGCACATGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR CAA 90 bp | GCACTAACACCAGGCAGAATTTATACGACACAGGGCACCGAAAGCTaGCTCTACCCTCAGGACTGCAATGGAGAGATTCCTCTGAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: ALTPGRIYTTQGTES*LYPQDCNGEIPLKA Trigger: AGCTTTCAGAGGAATCTCTCCATTGCAGTCCTGAGGGTAGAGCAAGCTTTCGGTGCCCTGTGTCGTATAAATTCTGCCTGGTGTTAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGAATGACTGTGGATCCTTGAGGAGGAGGAGGAGCAACGCGAACCCGGCTAGTGTTTCCAAGCTGTaGAAAACAACATTGAACTGC | + |
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Preference number: 2 (lower is better) Translates to: SLNDCGSLRRRRSNANPASVSKL*KTTLNC Trigger: GCAGTTCAATGTTGTTTTTCACAGCTTGGAAACACT...AGCCGGGTTCGCGTTGCTCCTCCTCCTCCTCAAGGATCCACAGTCATTCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGAATGACTGTGGATCCTTGAGGAGGAGGAGGAGCAACGCGAACCCGGCTGCCAATCTGCTTCTTTaGAGTCATGCTACTTTTACA | + |
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Preference number: 2 (lower is better) Translates to: SLNDCGSLRRRRSNANPAANLLL*SHATFT Trigger: TGTAAAAGTAGCATGACTTCAAAGAAGCAGATTGGC...AGCCGGGTTCGCGTTGCTCCTCCTCCTCCTCAAGGATCCACAGTCATTCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGAGAGTGGATATAGAAGGACAGGGAGATGAGTGGGATTGGGTTATAAGCAAGAGCAAAGACACCTaGCCACAAAGTGCCAACTCC | + |
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Preference number: 2 (lower is better) Translates to: GQRVDIEGQGDEWDWVISKSKDT*PQSANS Trigger: GGAGTTGGCACTTTGTGGTCAGGTGTCTTTGCTCTT...GCTTATAACCCAATCCCACTCATCTCCCTGTCCTTCTATATCCACTCTCTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGGTCAGGAGGCAGCTAGCCTGGTGTATGTATACAGGAGGAAACAAGAGATCAGCACTCTCTGAATaGCTGTGGATCCTTGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: WKVRRQLAWCMYTGGNKRSALSE*LWILEE Trigger: CTCCTCAAGGATCCACAGTCATTCAGAGAGTGCTGA...TCTCTTGTTTCCTCCTGTATACATACACCAGGCTAGCTGCCTCCTGACCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR GCA 90 bp | AAGACAGGGTCTCCCTGTGTAGTCTCCTGGGACTCACTAGGTAAACCTGCATGTCGAATTCAAGAGATGTaGCTCTGCCTTCCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: KTGSPCVVSWDSLGKPACRIQEM*LCLPSA Trigger: AGCACTTGGAAGGCAGAGGCACATCTCTTGAATTCG...ACATGCAGGTTTACCTAGTGAGTCCCAGGAGACTACACAGGGAGACCCTGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGAGAGTGGATATAGAAGGACAGGGAGATGAGTGGGATTGGGTTATAAGCATGAGCAAACCAAGATaGGAAGGAACTGACAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GQRVDIEGQGDEWDWVISMSKPR*EGTDRE Trigger: CTCCCTGTCAGTTCCTTCTCATCTTGGTTTGCTCAT...GCTTATAACCCAATCCCACTCATCTCCCTGTCCTTCTATATCCACTCTCTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR GCA 90 bp | AGGCATGTGCCACCATGCCCAATTTATCTGCTGCTATCGGGCAGGCAGCATAGAGAGACTCTGCCAATCTaGTTCTTTGAAGTCATGCTA | + |
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Preference number: 2 (lower is better) Translates to: RHVPPCPIYLLLSGRQHRETLPI*FFEVML Trigger: TAGCATGACTTCAAAGAAGCAGATTGGCAGAGTCTC...TCTATGCTGCCTGCCCGATAGCAGCAGATAAATTGGGCATGGTGGCACATGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR CAA 90 bp | AAAAGTGGGCTAAGTGGCCTGCCTAGTACTGGTAATATTTGGGTTTaGCTTTTGTGGTGCCTGAGGTTTGAGCCAGGGCTTTGTGTATGC | + |
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Preference number: 2 (lower is better) Translates to: KSGLSGLPSTGNIWV*LLWCLRFEPGLCVC Trigger: GCATACACAAAGCCCTGGCTCAAACCTCAGGCACCACAAAAGCAAAACCCAAATATTACCAGTACTAGGCAGGCCACTTAGCCCACTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR TCA 90 bp | GATTCACTGCTGATGGACAGTAACTCTCGAAGTTCCTTATTTTCAAGCTCCAGCTGGTTATCGTCCACCTaGACAGCTCTCCGCATCACT | + |
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Preference number: 2 (lower is better) Translates to: DSLLMDSNSRSSLFSSSSWLSST*TALRIT Trigger: AGTGATGCGGAGAGCTGTTCAGGTGGACGATAACCA...GCTGGAGCTTGAAAATAAGGAACTTCGAGAGTTACTGTCCATCAGCAGTGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197601.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGAGAGTGGATATAGAAGGACAGGGAGATGAGTGGGATTGGGTTATAAGCAGAAAACCCAGCAGATaGAAAGACAGCAAAGTACTG | + |
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Preference number: 2 (lower is better) Translates to: GQRVDIEGQGDEWDWVISRKPSR*KDSKVL Trigger: CAGTACTTTGCTGTCTTTCCATCTGCTGGGTTTTCT...GCTTATAACCCAATCCCACTCATCTCCCTGTCCTTCTATATCCACTCTCTGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR CAA 90 bp | TTCAGAGGTTTCTGTGTGGCTCCCAGCTTTGCCATATCACTAACTTaGAAATTCAAAGCAGCTGAATCTTTCCTCGATGCCAAGGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: FRGFCVAPSFAISLT*KFKAAESFLDAKVA Trigger: AGCCACCTTGGCATCGAGGAAAGATTCAGCTGCTTTGAATTTCAAAGTTAGTGATATGGCAAAGCTGGGAGCCACACAGAAACCTCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR TCA 90 bp | AAGACAGGGTCTCCCTGTGTAGTCTCCTGGGACTCACTAGGTAAACCTGCATGTTATAAACCTGACATATaGGCAAACCAAGATGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: KTGSPCVVSWDSLGKPACYKPDI*ANQDEK Trigger: CTTCTCATCTTGGTTTGCTCATATGTCAGGTTTATA...ACATGCAGGTTTACCTAGTGAGTCCCAGGAGACTACACAGGGAGACCCTGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR TCA 90 bp | AGAATAGGAAGAAACACTTCAACCAGCTTCTCCCACATACCTTTATATAACAAACCCTTCCCTCCACACTaGGGACCACTCACAGGCACA | + |
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Preference number: 2 (lower is better) Translates to: RIGRNTSTSFSHIPLYNKPFPPH*GPLTGT Trigger: TGTGCCTGTGAGTGGTCCTCAGTGTGGAGGGAAGGG...TTTGTTATATAAAGGTATGTGGGAGAAGCTGGTTGAAGTGTTTCTTCCTATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR GCA 90 bp | GTCCTTAAGAAATGTGCTGAAGAGTGCCTGAGTGTGATTCTTGGCTCCACTTTGGTCACTCAGAGACTCTaGCAATCTGCTTCTTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: VLKKCAEECLSVILGSTLVTQRL*QSASLK Trigger: CTTCAAAGAAGCAGATTGGCAGAGTCTCTGAGTGAC...CAAAGTGGAGCCAAGAATCACACTCAGGCACTCTTCAGCACATTTCTTAAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR CCA 90 bp | AAGACAGGGTCTCCCTGTGTAGTCTCCTGGGACTCACTAGGTAAACCTGCATGTCTTAGGCAGACAGAATaGAAAACTACTTGGTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: KTGSPCVVSWDSLGKPACLRQTE*KTTWSN Trigger: ATTTGACCAAGTAGTTTTCCATTCTGTCTGCCTAAG...ACATGCAGGTTTACCTAGTGAGTCCCAGGAGACTACACAGGGAGACCCTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR GCA 90 bp | TGGAAGGTCAGGAGGCAGCTAGCCTGGTGTATGTATACAGGAGGAAACAAGAGAGCTTCTTTGAAGTCATaGTACTTTTACAAGTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: WKVRRQLAWCMYTGGNKRASLKS*YFYKWK Trigger: CTTCCACTTGTAAAAGTAGCATGACTTCAAAGAAGC...TCTCTTGTTTCCTCCTGTATACATACACCAGGCTAGCTGCCTCCTGACCTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR GCA 90 bp | GTCCTTAAGAAATGTGCTGAAGAGTGCCTGAGTGTGATTCTTGGCTCCACTTTGACACAGCCCTTTCTGTaGTGTATCCTACACTTACAT | + |
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Preference number: 2 (lower is better) Translates to: VLKKCAEECLSVILGSTLTQPFL*CILHLH Trigger: ATGTAAGTGTAGGATACAGCACAGAAAGGGCTGTGT...CAAAGTGGAGCCAAGAATCACACTCAGGCACTCTTCAGCACATTTCTTAAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| 3UTR-3UTR GCA 90 bp | GTATACTCTTACTTATACTGTAAACTAGTATGCTTTGTTGTGTGGCTAGCAGCTCACCCTGTGCAGAAATaGACCCTTCCCTCCACACTG | + |
|
Preference number: 2 (lower is better) Translates to: VYSYLYCKLVCFVVWLAAHPVQK*TLPSTL Trigger: CAGTGTGGAGGGAAGGGTGCATTTCTGCACAGGGTG...AGCTGCTAGCCACACAACAAAGCATACTAGTTTACAGTATAAGTAAGAGTATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CAA 90 bp | TCCCCTGGATCTAGAATTACAATTGATTGTGAGCTGCCTGATGTGTaGGGAATCAAACTTGAGTCCTCTGCAAGAGCAGCATATTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SPGSRITIDCELPDV*GIKLESSARAAYSL Trigger: AAGAGAATATGCTGCTCTTGCAGAGGACTCAAGTTTGATTCCCAACACATCAGGCAGCTCACAATCAATTGTAATTCTAGATCCAGGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR TCA 90 bp | GTCCTTAAGAAATGTGCTGAAGAGTGCCTGAGTGTGATTCTTGGCTCCACTTTGATTGCAAGCTGCTTATaGCATCTATGTCATGAACAC | + |
|
Preference number: 2 (lower is better) Translates to: VLKKCAEECLSVILGSTLIASCL*HLCHEH Trigger: GTGTTCATGACATAGATGTCATAAGCAGCTTGCAAT...CAAAGTGGAGCCAAGAATCACACTCAGGCACTCTTCAGCACATTTCTTAAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR TCA 90 bp | AGAATAGGAAGAAACACTTCAACCAGCTTCTCCCACATACCTTTATATAACAAACCCTCATGTGGGTTCTaGGGAATTGAACTCAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: RIGRNTSTSFSHIPLYNKPSCGF*GIELRP Trigger: TGGCCTGAGTTCAATTCCTCAGAACCCACATGAGGG...TTTGTTATATAAAGGTATGTGGGAGAAGCTGGTTGAAGTGTTTCTTCCTATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR GCA 90 bp | GTATACTCTTACTTATACTGTAAACTAGTATGCTTTGTTGTGTGGCTAGCAGCTGTTTTGCTTTTGTGGTaGCTGAGGTTTGAGCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: VYSYLYCKLVCFVVWLAAVLLLW*LRFEPG Trigger: CCCTGGCTCAAACCTCAGGCACCACAAAAGCAAAAC...AGCTGCTAGCCACACAACAAAGCATACTAGTTTACAGTATAAGTAAGAGTATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR CCA 90 bp | GTCCTTAAGAAATGTGCTGAAGAGTGCCTGAGTGTGATTCTTGGCTCCACTTTGGTAATTTTTAGAAGTTaGTTCTCTCCTTCCCTCATG | + |
|
Preference number: 2 (lower is better) Translates to: VLKKCAEECLSVILGSTLVIFRS*FSPSLM Trigger: CATGAGGGAAGGAGAGAACCAACTTCTAAAAATTAC...CAAAGTGGAGCCAAGAATCACACTCAGGCACTCTTCAGCACATTTCTTAAGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCAATTAACCTTGACATGATAATACAAATCAACTACAAATCTGCCTGGGTTGATTCCGGACTAGAGTaGCAAATGTCATCTCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: WAINLDMIIQINYKSAWVDSGLE*QMSSLS Trigger: GGACAGAGATGACATTTGTCACTCTAGTCCGGAATC...AACCCAGGCAGATTTGTAGTTGATTTGTATTATCATGTCAAGGTTAATTGCCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR TCA 90 bp | GTATACTCTTACTTATACTGTAAACTAGTATGCTTTGTTGTGTGGCTAGCAGCTAGAGAGGAGCGCTGGTaGAGGCAACAAAGTTGTATT | + |
|
Preference number: 2 (lower is better) Translates to: VYSYLYCKLVCFVVWLAAREERW*RQQSCI Trigger: AATACAACTTTGTTGCCTTCACCAGCGCTCCTCTCT...AGCTGCTAGCCACACAACAAAGCATACTAGTTTACAGTATAAGTAAGAGTATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR CCA 90 bp | AGAATAGGAAGAAACACTTCAACCAGCTTCTCCCACATACCTTTATATAACAAAGAACCCACCCCTGAATaGGTTTGTGGAGTACACACT | + |
|
Preference number: 2 (lower is better) Translates to: RIGRNTSTSFSHIPLYNKEPTPE*VCGVHT Trigger: AGTGTGTACTCCACAAACCCATTCAGGGGTGGGTTC...TTTGTTATATAAAGGTATGTGGGAGAAGCTGGTTGAAGTGTTTCTTCCTATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCAATTAACCTTGACATGATAATACAAATCAACTACAAATCTGCCTGGGTTTCAGAGGTTTCTGTGTaGCTCCCAGCTTTGCCATAT | + |
|
Preference number: 2 (lower is better) Translates to: WAINLDMIIQINYKSAWVSEVSV*LPALPY Trigger: ATATGGCAAAGCTGGGAGCCACACAGAAACCTCTGA...AACCCAGGCAGATTTGTAGTTGATTTGTATTATCATGTCAAGGTTAATTGCCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CAA 90 bp | AAGAAATGTGCTGAAGAGTGCCTGAGTGTGATTCTTGGCTCCACTTaGGACAAATTAGAACCTTCTAGTATGTATGGAACTGTAAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: KKCAEECLSVILGST*DKLEPSSMYGTVKN Trigger: GTTCTTTACAGTTCCATACATACTAGAAGGTTCTAATTTGTCCAAAGTGGAGCCAAGAATCACACTCAGGCACTCTTCAGCACATTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR GCA 90 bp | TGGGCAATTAACCTTGACATGATAATACAAATCAACTACAAATCTGCCTGGGTTAAATGTGCTGAAGAGTaGCTGAGTGTGATTCTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: WAINLDMIIQINYKSAWVKCAEE*LSVILG Trigger: GCCAAGAATCACACTCAGGCACTCTTCAGCACATTT...AACCCAGGCAGATTTGTAGTTGATTTGTATTATCATGTCAAGGTTAATTGCCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR TCA 90 bp | AGAATAGGAAGAAACACTTCAACCAGCTTCTCCCACATACCTTTATATAACAAAAGCCCAGGCTGGTTTTaGATTTACTATGTAGCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: RIGRNTSTSFSHIPLYNKSPGWF*IYYVAK Trigger: CTTGGCTACATAGTAAATTCAAAACCAGCCTGGGCT...TTTGTTATATAAAGGTATGTGGGAGAAGCTGGTTGAAGTGTTTCTTCCTATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR GCA 90 bp | AGAATAGGAAGAAACACTTCAACCAGCTTCTCCCACATACCTTTATATAACAAACAGGTTGTTCTTGATTaGCTGAATGCATGGCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: RIGRNTSTSFSHIPLYNKQVVLD*LNAWHQ Trigger: CTGATGCCATGCATTCAGGCAATCAAGAACAACCTG...TTTGTTATATAAAGGTATGTGGGAGAAGCTGGTTGAAGTGTTTCTTCCTATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR GCA 90 bp | AGAATAGGAAGAAACACTTCAACCAGCTTCTCCCACATACCTTTATATAACAAATGCTATAAGGATGTTTaGAGCAAGTCTCCAGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: RIGRNTSTSFSHIPLYNKCYKDV*SKSPVS Trigger: GGAGACTGGAGACTTGCTGCAAACATCCTTATAGCA...TTTGTTATATAAAGGTATGTGGGAGAAGCTGGTTGAAGTGTTTCTTCCTATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR GCA 90 bp | AGAATAGGAAGAAACACTTCAACCAGCTTCTCCCACATACCTTTATATAACAAATTTAGGACTGTCCACTaGCTTTATCCACAGTCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: RIGRNTSTSFSHIPLYNKFRTVH*LYPQSS Trigger: TGAGGACTGTGGATAAAGGCAGTGGACAGTCCTAAA...TTTGTTATATAAAGGTATGTGGGAGAAGCTGGTTGAAGTGTTTCTTCCTATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR TCA 90 bp | AGAATAGGAAGAAACACTTCAACCAGCTTCTCCCACATACCTTTATATAACAAACTATGTAGCCAAGAATaGCCTTGGATTTCTGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: RIGRNTSTSFSHIPLYNKLCSQE*PWISAL Trigger: AAGAGCAGAAATCCAAGGTCATTCTTGGCTACATAG...TTTGTTATATAAAGGTATGTGGGAGAAGCTGGTTGAAGTGTTTCTTCCTATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCAATTAACCTTGACATGATAATACAAATCAACTACAAATCTGCCTGGGTTCCACACATAGGAAGGTaGTTCTGTTTTAATGGAACT | + |
|
Preference number: 2 (lower is better) Translates to: WAINLDMIIQINYKSAWVPHIGR*FCFNGT Trigger: AGTTCCATTAAAACAGAACCACCTTCCTATGTGTGG...AACCCAGGCAGATTTGTAGTTGATTTGTATTATCATGTCAAGGTTAATTGCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR GCA 90 bp | TGGGCAATTAACCTTGACATGATAATACAAATCAACTACAAATCTGCCTGGGTTTATGTCATGAACACTTaGCATGGTTGCTATGTATGT | + |
|
Preference number: 2 (lower is better) Translates to: WAINLDMIIQINYKSAWVYVMNT*HGCYVC Trigger: ACATACATAGCAACCATGGCAAGTGTTCATGACATA...AACCCAGGCAGATTTGTAGTTGATTTGTATTATCATGTCAAGGTTAATTGCCCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR GCA 90 bp | AGAATAGGAAGAAACACTTCAACCAGCTTCTCCCACATACCTTTATATAACAAAGAATGCATGATAATGTaGCTGCATTGCCATCTTATC | + |
|
Preference number: 2 (lower is better) Translates to: RIGRNTSTSFSHIPLYNKECMIM*LHCHLI Trigger: GATAAGATGGCAATGCAGGCACATTATCATGCATTC...TTTGTTATATAAAGGTATGTGGGAGAAGCTGGTTGAAGTGTTTCTTCCTATTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR TCA 90 bp | AGAATAGGAAGAAACACTTCAACCAGCTTCTCCCACATACCTTTATATAACAAATGTCTATTTAATAAGTaGGGCAGATATGGAGAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: RIGRNTSTSFSHIPLYNKCLFNK*GRYGEN Trigger: GTTCTCTCCATATCTGCCTCACTTATTAAATAGACA...TTTGTTATATAAAGGTATGTGGGAGAAGCTGGTTGAAGTGTTTCTTCCTATTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR TCA 72 bp | GGACACGGCAGGAGAGGAGGGCACGGCTTCTCGCTCTaGCGGGCAAGCTGTAGCCAGCCTTCGGAAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GHGRRGGHGFSL*RASCSQPSEVQ Trigger: CTGGACTTCCGAAGGCTGGCTACAGCTTGCCCGTCAGAGCGAGAAGCCGTGCCCTCCTCTCCTGCCGTGTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
||
| 3UTR GCA 72 bp | CTTCCACAGCTGCCTGCTAGCACTCCAGACCTGCTCTaGTGCTCTTCTATGGAGCCAAACCCAGCAGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LPQLPASTPDLL*CSSMEPNPAAA Trigger: GGCTGCTGCTGGGTTTGGCTCCATAGAAGAGCAGCAGAGCAGGTCTGGAGTGCTAGCAGGCAGCTGTGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CCA 72 bp | CTACCCAACACTAAGTCAAGTCTGCGGCAGGACTCTTaGACACGGCAGGAGAGGAGGGCACGGCTTCTCGCT | + |
|
Preference number: 3 (lower is better) Translates to: LPNTKSSLRQDS*TRQERRARLLA Trigger: AGCGAGAAGCCGTGCCCTCCTCTCCTGCCGTGTCCAAGAGTCCTGCCGCAGACTTGACTTAGTGTTGGGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
||
| 3UTR CCA 72 bp | CCTGCACAATATAGGCAGGTGAGGTATCAACACAGCTaGGACCCAGCTCTCCTGTGGTCAGCTGGGAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PAQYRQVRYQHS*DPALLWSAGRG Trigger: CCCCCTCCCAGCTGACCACAGGAGAGCTGGGTCCCAGCTGTGTTGATACCTCACCTGCCTATATTGTGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CCA 72 bp | CTGCTAGCACTCCAGACCTGCTCTGCTGCTCTTCTATaGAGCCAAACCCAGCAGCAGCCTGTGTTGCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LLALQTCSAALL*SQTQQQPVLLV Trigger: GACCAGCAACACAGGCTGCTGCTGGGTTTGGCTCCATAGAAGAGCAGCAGAGCAGGTCTGGAGTGCTAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CCA 72 bp | TCAACACAGCTGGGACCCAGCTCTCCTGTGGTCAGCTaGGAGGGGGAGACAGGAGAAACTTTGGAAGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: STQLGPSSPVVS*EGETGETLEGQ Trigger: CTGACCTTCCAAAGTTTCTCCTGTCTCCCCCTCCCAGCTGACCACAGGAGAGCTGGGTCCCAGCTGTGTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CCA 72 bp | GTGAGGTATCAACACAGCTGGGACCCAGCTCTCCTGTaGTCAGCTGGGAGGGGGAGACAGGAGAAACTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VRYQHSWDPALL*SAGRGRQEKLW Trigger: CCAAAGTTTCTCCTGTCTCCCCCTCCCAGCTGACCACAGGAGAGCTGGGTCCCAGCTGTGTTGATACCTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR CAA 90 bp | AAGACAGGGTCTCCCTGTGTAGTCTCCTGGGACTCACTAGGTAAACCTGCATGTCAGGGCACCGAAAGCTaGCTCTACCCTCAGGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: KTGSPCVVSWDSLGKPACQGTES*LYPQDC Trigger: GCAGTCCTGAGGGTAGAGCAAGCTTTCGGTGCCCTG...ACATGCAGGTTTACCTAGTGAGTCCCAGGAGACTACACAGGGAGACCCTGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CCA 72 bp | TGTTTGCAGCAAGTCTCCAGTCTCCACTGCATACACTaGGTCTTCCACAGCTGCCTGCTAGCACTCCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: CLQQVSSLHCIH*VFHSCLLALQT Trigger: GGTCTGGAGTGCTAGCAGGCAGCTGTGGAAGACCCAGTGTATGCAGTGGAGACTGGAGACTTGCTGCAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CCA 72 bp | CTGTGGTCAGCTGGGAGGGGGAGACAGGAGAAACTTTaGAAGGTCAGGAGGCAGCTAGCCTGGTGTATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: LWSAGRGRQEKL*KVRRQLAWCMY Trigger: ATACATACACCAGGCTAGCTGCCTCCTGACCTTCCAAAGTTTCTCCTGTCTCCCCCTCCCAGCTGACCACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR GCA 72 bp | TCCTCGAATTCAAGAGATGTGCCTCTGCCTTCCAAGTaGTGGGATTGCAGGTGTACATCGCCACTGCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSNSRDVPLPSK*WDCRCTSPLLS Trigger: GCTGAGCAGTGGCGATGTACACCTGCAATCCCAGCACTTGGAAGGCAGAGGCACATCTCTTGAATTCGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR TCA 72 bp | GTAGCCAGCCTTCGGAAGTCCAGTTACTTGATGGTCTaGGAGGCAGGAGCCACAGAGCTTTCTTTTCCAACC | + |
|
Preference number: 3 (lower is better) Translates to: VASLRKSSYLMV*EAGATELSFPT Trigger: GGTTGGAAAAGAAAGCTCTGTGGCTCCTGCCTCTCAGACCATCAAGTAACTGGACTTCCGAAGGCTGGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197601.2 |
||
| 3UTR CCA 72 bp | GTGAGGGTGTCTTTACATGTACACTGCACATGTATGTaGGCGTTCATGGAGGCCAGATGTCAGATCCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VRVSLHVHCTCM*AFMEARCQIPW Trigger: CCAGGGGATCTGACATCTGGCCTCCATGAACGCCCACATACATGTGCAGTGTACATGTAAAGACACCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR GCA 72 bp | AAACCTGCATGTCCTCGAATTCAAGAGATGTGCCTCTaGCTTCCAAGTGCTGGGATTGCAGGTGTACATCGC | + |
|
Preference number: 3 (lower is better) Translates to: KPACPRIQEMCL*LPSAGIAGVHR Trigger: GCGATGTACACCTGCAATCCCAGCACTTGGAAGGCAGAGGCACATCTCTTGAATTCGAGGACATGCAGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR CAA 90 bp | GCTAGCACTCCAGACCTGCTCTGCTGCTCTTCTATGGAGCCAAACCCAGCAGCATGCCAATCTGCTTCTTaGAAGTCATGCTACTTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: ASTPDLLCCSSMEPNPAACQSAS*KSCYFY Trigger: GTAAAAGTAGCATGACTTCAAAGAAGCAGATTGGCA...TGCTGCTGGGTTTGGCTCCATAGAAGAGCAGCAGAGCAGGTCTGGAGTGCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAGAGAGTGGATATAGAAGGACAGGGAGATGAGTGGGATTGGGTTATAAGCGAGCTGCCTGATGTGTaGGGAATCAAACTTGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GQRVDIEGQGDEWDWVISELPDV*GIKLES Trigger: GGACTCAAGTTTGATTCCCAACACATCAGGCAGCTC...GCTTATAACCCAATCCCACTCATCTCCCTGTCCTTCTATATCCACTCTCTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR TCA 72 bp | ATTTTGAATCCCCAGAACCTGCACAATATAGGCAGGTaGGGTATCAACACAGCTGGGACCCAGCTCTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: ILNPQNLHNIGR*GINTAGTQLSC Trigger: ACAGGAGAGCTGGGTCCCAGCTGTGTTGATACCTCACCTGCCTATATTGTGCAGGTTCTGGGGATTCAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR GCA 72 bp | GTACATGTACAGTCATGTACATCTAATAGCTCCCTGTaGATGATGGGGCAGGCCCAAGTTCCTCAGCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: VHVQSCTSNSSL*MMGQAQVPQHS Trigger: AGAGTGCTGAGGAACTTGGGCCTGCCCCATCATGCACAGGGAGCTATTAGATGTACATGACTGTACATGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CCA 72 bp | CAGGAGGAAACAAGAGACTTTTCAGCTGACAAGGACTaGCACCTGAGGCTACTAGCCTCTAACCTCTACATG | + |
|
Preference number: 3 (lower is better) Translates to: QEETRDFSADKD*HLRLLASNLYM Trigger: CATGTAGAGGTTAGAGGCTAGTAGCCTCAGGTGCCAGTCCTTGTCAGCTGAAAAGTCTCTTGTTTCCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR TCA 72 bp | TCACAGGCACAGCATTCTAGGGACCATGCAGCAGCGTaGACTAAACAGAAGTCACGGTATTCACAACACACA | + |
|
Preference number: 3 (lower is better) Translates to: SQAQHSRDHAAA*TKQKSRYSQHT Trigger: TGTGTGTTGTGAATACCGTGACTTCTGTTTAGTTCACGCTGCTGCATGGTCCCTAGAATGCTGTGCCTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CCA 72 bp | AGTGGGCTAAGTGGCCTGCCTAGTACTGGTAATATTTaGGTTTTGCTTTTGTGGTGCCTGAGGTTTGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SGLSGLPSTGNI*VLLLWCLRFEP Trigger: TGGCTCAAACCTCAGGCACCACAAAAGCAAAACCCAAATATTACCAGTACTAGGCAGGCCACTTAGCCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAGAGAGTGGATATAGAAGGACAGGGAGATGAGTGGGATTGGGTTATAAGCTGTCAGTCACCTATTTaGTCAGTGTCCCCAGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GQRVDIEGQGDEWDWVISCQSPI*SVSPVL Trigger: CAAAACTGGGGACACTGACAAAATAGGTGACTGACA...GCTTATAACCCAATCCCACTCATCTCCCTGTCCTTCTATATCCACTCTCTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR TCA 72 bp | CTGCAGGTAACAGTTTATAGAGATTCCGGACTAGAGTaGCAAATGTCATCTCTGTCCCAGCAATGGGGGACT | + |
|
Preference number: 3 (lower is better) Translates to: LQVTVYRDSGLE*QMSSLSQQWGT Trigger: AGTCCCCCATTGCTGGGACAGAGATGACATTTGTCACTCTAGTCCGGAATCTCTATAAACTGTTACCTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
||
| 3UTR GCA 72 bp | CAGGACTGCAATGGAGAGATTCCTCTGAAAGCTAGATaGAAAGACCTTTGTAGTGAGTGCTACGGGAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: QDCNGEIPLKAR*KDLCSECYGNR Trigger: TCTGTTCCCGTAGCACTCACTACAAAGGTCTTTGCATCTAGCTTTCAGAGGAATCTCTCCATTGCAGTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR GCA 72 bp | TTGGTTATCGTCCACCTGAACAGCTCTCCGCATCACTaGTCCCATTTCACAGATTCTATCGATCTGACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LVIVHLNSSPHH*SHFTDSIDLTF Trigger: GAAAGTCAGATCGATAGAATCTGTGAAATGGGAGCAGTGATGCGGAGAGCTGTTCAGGTGGACGATAACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197601.2 |
||
| 3UTR CCA 72 bp | CTTTACATGTACACTGCACATGTATGTGGGCGTTCATaGAGGCCAGATGTCAGATCCCCTGGATCTAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: LYMYTAHVCGRS*RPDVRSPGSRI Trigger: AATTCTAGATCCAGGGGATCTGACATCTGGCCTCCATGAACGCCCACATACATGTGCAGTGTACATGTAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR-3UTR CAA 90 bp | AGAATAGGAAGAAACACTTCAACCAGCTTCTCCCACATACCTTTATATAACAAACAGCAGCAGCCTGTGTaGCTGGTCCCCAGGTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RIGRNTSTSFSHIPLYNKQQQPV*LVPRFR Trigger: TCTGAACCTGGGGACCAGCAACACAGGCTGCTGCTG...TTTGTTATATAAAGGTATGTGGGAGAAGCTGGTTGAAGTGTTTCTTCCTATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR TCA 72 bp | TTAGAAGTTGGTTCTCTCCTTCCCTCATGTGGGTTCTaGGGAATTGAACTCAGGCCATCTGACTTCATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LEVGSLLPSCGF*GIELRPSDFMV Trigger: TACCATGAAGTCAGATGGCCTGAGTTCAATTCCTCAGAACCCACATGAGGGAAGGAGAGAACCAACTTCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR TCA 72 bp | CCCAGGCTGGTTTTGAATTTACTATGTAGCCAAGAATaGCCTTGGATTTCTGCTCTTCCTGCTTCTGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PRLVLNLLCSQE*PWISALPASAP Trigger: TGGAGCAGAAGCAGGAAGAGCAGAAATCCAAGGTCATTCTTGGCTACATAGTAAATTCAAAACCAGCCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR TCA 72 bp | AGGCAGGGAAACTTTACCCAGGCATGGGTAGGACATTaGGCAGTCAGTAAAGAAATAACAGTGTCCACTACA | + |
|
Preference number: 3 (lower is better) Translates to: RQGNFTQAWVGH*AVSKEITVSTT Trigger: TGTAGTGGACACTGTTATTTCTTTACTGACTGCTCAATGTCCTACCCATGCCTGGGTAAAGTTTCCCTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR GCA 72 bp | CCTCTGAAAGCTAGATGCAAAGACCTTTGTAGTGAGTaGTACGGGAACAGAAGGCAGATAAAGAAAGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: PLKARCKDLCSE*YGNRRQIKKGT Trigger: TGTCCCTTTCTTTATCTGCCTTCTGTTCCCGTAGCACTCACTACAAAGGTCTTTGCATCTAGCTTTCAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR GCA 72 bp | ATGGATGAGCGACGTCACTCAGAGACTCTGCCAATCTaGTTCTTTGAAGTCATGCTACTTTTACAAGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: MDERRHSETLPI*FFEVMLLLQVE Trigger: TTCCACTTGTAAAAGTAGCATGACTTCAAAGAAGCAGATTGGCAGAGTCTCTGAGTGACGTCGCTCATCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR GCA 72 bp | TGCCTTAACTTGGTCCTTAAGAAATGTGCTGAAGAGTaGCTGAGTGTGATTCTTGGCTCCACTTTGGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: CLNLVLKKCAEE*LSVILGSTLDK Trigger: TTTGTCCAAAGTGGAGCCAAGAATCACACTCAGGCACTCTTCAGCACATTTCTTAAGGACCAAGTTAAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR GCA 72 bp | AGAAAGCCACCTAGAGAGGAGCAGGCAGTGGTAAAATaGTTGCCACACAAGTGTGAGGAATTGATTTTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RKPPREEQAVVK*LPHKCEELILN Trigger: ATTCAAAATCAATTCCTCACACTTGTGTGGCAAGCATTTTACCACTGCCTGCTCCTCTCTAGGTGGCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR TCA 72 bp | TTAGAACCTTCTAGTATGTATGGAACTGTAAAGAACTaGAGCGGGGATGCTGTGTCAGCTGACACAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LEPSSMYGTVKN*SGDAVSADTEN Trigger: GTTTTCTGTGTCAGCTGACACAGCATCCCCGCTTCAGTTCTTTACAGTTCCATACATACTAGAAGGTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR TCA 72 bp | CTTTGCCATATCACTAACTTTGAAATTCAAAGCAGCTaGATCTTTCCTCGATGCCAAGGTGGCTGGGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: LCHITNFEIQSS*IFPRCQGGWET Trigger: AGTTTCCCAGCCACCTTGGCATCGAGGAAAGATTCAGCTGCTTTGAATTTCAAAGTTAGTGATATGGCAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR TCA 72 bp | TGTTCTGGGACTCAATATGTAGATCAGGCTCATCTCTaGACTCATAGAAATCTATCTGCTGCTAACTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CSGTQYVDQAHL*THRNLSAANSS Trigger: GCTGGAGTTAGCAGCAGATAGATTTCTATGAGTTCAGAGATGAGCCTGATCTACATATTGAGTCCCAGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR GCA 72 bp | TTAGTGGACAATGAATACCAAGTGGCAATTCTAAACTaGCACCCCATACCTCTACCCAACACTAAGTCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LVDNEYQVAILN*HPIPLPNTKSS Trigger: ACTTGACTTAGTGTTGGGTAGAGGTATGGGGTGGCAGTTTAGAATTGCCACTTGGTATTCATTGTCCACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
||
| 3UTR GCA 72 bp | GGCAACAAAGTTGTATTCACAGCATCCTCAAATAACTaGTTAGAAAGTGCTTCTGTTGAGAAGTGTGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: GNKVVFTASSNN*LESASVEKCGP Trigger: GGGTCCACACTTCTCAACAGAAGCACTTTCTAAGCAGTTATTTGAGGATGCTGTGAATACAACTTTGTTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR GCA 72 bp | ATTTTCTTTCTCAGGATCACATTTAGGACTGTCCACTaGCTTTATCCACAGTCCTCAGTCTACGGTAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: IFFLRITFRTVH*LYPQSSVYGSS Trigger: AGAACTACCGTAGACTGAGGACTGTGGATAAAGGCAGTGGACAGTCCTAAATGTGATCCTGAGAAAGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CCA 72 bp | CGCGAACCCGGCTTACTTGTTTTCAAGCGTATTTCCTaGGGACTAATAGATTCTCTCAAATTAAGAGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: REPGLLVFKRIS*GLIDSLKLRAK Trigger: CTTTGCTCTTAATTTGAGAGAATCTATTAGTCCCCAGGAAATACGCTTGAAAACAAGTAAGCCGGGTTCGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CCA 72 bp | CTAGAATTACAATTGATTGTGAGCTGCCTGATGTGTTaGGAATCAAACTTGAGTCCTCTGCAAGAGCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LELQLIVSCLMC*ESNLSPLQEQH Trigger: ATGCTGCTCTTGCAGAGGACTCAAGTTTGATTCCCAACACATCAGGCAGCTCACAATCAATTGTAATTCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR TCA 72 bp | CTGAATGCATGGCATCAGGAATGTGGTAACTTTCTGTaGGTAATAAAATGCTTCCATGAGAAAACCCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LNAWHQECGNFL*VIKCFHEKTQQ Trigger: CTGCTGGGTTTTCTCATGGAAGCATTTTATTACTCACAGAAAGTTACCACATTCCTGATGCCATGCATTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR TCA 72 bp | CACAGCCCTTTCTGTGCTGTATCCTACACTTACATCTaGTGTAACACACTGCATCAAAATTATCTGCACAAC | + |
|
Preference number: 3 (lower is better) Translates to: HSPFCAVSYTYI*CNTLHQNYLHN Trigger: GTTGTGCAGATAATTTTGATGCAGTGTGTTACATCAGATGTAAGTGTAGGATACAGCACAGAAAGGGCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR TCA 72 bp | ACAAAAGATCTTACTTTAAAGAGAGAGGAGCGCTGGTaGAGGCAACAAAGTTGTATTCACAGCATCCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TKDLTLKREERW*RQQSCIHSILK Trigger: TTTGAGGATGCTGTGAATACAACTTTGTTGCCTTCACCAGCGCTCCTCTCTCTTTAAAGTAAGATCTTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CCA 72 bp | GCAAACACTATGCTAAGCCTCATCAGACATCAGCGATaGATTAGTTTTGAGGTAATTTTAGACTTACAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ANTMLSLIRHQR*ISFEVILDLQR Trigger: CCTCTGTAAGTCTAAAATTACCTCAAAACTAATCCATCGCTGATGTCTGATGAGGCTTAGCATAGTGTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR TCA 72 bp | ATGCTAGGCAGGTGTTTTCCCCACACTGGTAATAACTaGGTTCTTAAATTAGGTAATGAATGCATGATAATG | + |
|
Preference number: 3 (lower is better) Translates to: MLGRCFPHTGNN*VLKLGNECMIM Trigger: CATTATCATGCATTCATTACCTAATTTAAGAACTCAGTTATTACCAGTGTGGGGAAAACACCTGCCTAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR TCA 72 bp | TTGAATAATTGCAAGCTGCTTATGACATCTATGTCATaGACACTTGCCATGGTTGCTATGTATGTGAATATG | + |
|
Preference number: 3 (lower is better) Translates to: LNNCKLLMTSMS*TLAMVAMYVNM Trigger: CATATTCACATACATAGCAACCATGGCAAGTGTTCATGACATAGATGTCATAAGCAGCTTGCAATTATTCAA 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CCA 72 bp | TGTCCTTTGATCTGTATTATGCCACACATAGGAAGGTaGTTCTGTTTTAATGGAACTGAACAATTTCTATTG | + |
|
Preference number: 3 (lower is better) Translates to: CPLICIMPHIGR*FCFNGTEQFLL Trigger: CAATAGAAATTGTTCAGTTCCATTAAAACAGAACCACCTTCCTATGTGTGGCATAATACAGATCAAAGGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR GCA 72 bp | GTGCTGTATCCTACACTTACATCTGATGTAACACACTaGATCAAAATTATCTGCACAACATTTTGTTTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: VLYPTLTSDVTH*IKIICTTFCLV Trigger: AACTAAACAAAATGTTGTGCAGATAATTTTGATGCAGTGTGTTACATCAGATGTAAGTGTAGGATACAGCAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| CDS-3UTR CCA 90 bp | ACGGCAGGAGAGGAGGGCACGGCTTCTCGCTCTGACGGGCAAGCTGTAGCCAGCTGCAGCGCAGCCGACTaGTCCACCAGCGACTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TAGEEGTASRSDGQAVASCSAAD*STSDSA Trigger: GGCCGAGTCGCTGGTGGACCAGTCGGCTGCGCTGCA...GCTGGCTACAGCTTGCCCGTCAGAGCGAGAAGCCGTGCCCTCCTCTCCTGCCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
||
| CDS-3UTR CCA 90 bp | ACGGCAGGAGAGGAGGGCACGGCTTCTCGCTCTGACGGGCAAGCTGTAGCCAGCGCTCCAGCAGCGTCTTaGCGTCCGTCAAGATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TAGEEGTASRSDGQAVASAPAAS*RPSRSS Trigger: AGAAGATCTTGACGGACGCCAAGACGCTGCTGGAGC...GCTGGCTACAGCTTGCCCGTCAGAGCGAGAAGCCGTGCCCTCCTCTCCTGCCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTGAATGACTGTGGATCCTTGAGGAGGAGGAGGAGCAACGCGAACCCGGCTTGCAGCGCAGCCGACTaGTCCACCAGCGACTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLNDCGSLRRRRSNANPACSAAD*STSDSA Trigger: GGCCGAGTCGCTGGTGGACCAGTCGGCTGCGCTGCA...AGCCGGGTTCGCGTTGCTCCTCCTCCTCCTCAAGGATCCACAGTCATTCAGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| CDS-3UTR CCA 90 bp | GCTAGCACTCCAGACCTGCTCTGCTGCTCTTCTATGGAGCCAAACCCAGCAGCAGCTCCAGCAGCGTCTTaGCGTCCGTCAAGATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASTPDLLCCSSMEPNPAAAPAAS*RPSRSS Trigger: AGAAGATCTTGACGGACGCCAAGACGCTGCTGGAGC...TGCTGCTGGGTTTGGCTCCATAGAAGAGCAGCAGAGCAGGTCTGGAGTGCTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CAA 72 bp | CCTGTGGTCAGCTGGGAGGGGGAGACAGGAGAAACTTaGGAAGGTCAGGAGGCAGCTAGCCTGGTGTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: PVVSWEGETGET*EGQEAASLVYV Trigger: TACATACACCAGGCTAGCTGCCTCCTGACCTTCCAAAGTTTCTCCTGTCTCCCCCTCCCAGCTGACCACAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CAA 72 bp | CAAGTTCCTCAGCACTCTCTGAATGACTGTGGATCCTaGAGGAGGAGGAGGAGCAACGCGAACCCGGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QVPQHSLNDCGS*RRRRSNANPAY Trigger: GTAAGCCGGGTTCGCGTTGCTCCTCCTCCTCCTCAAGGATCCACAGTCATTCAGAGAGTGCTGAGGAACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| CDS-3UTR GCA 90 bp | AGGCATGTGCCACCATGCCCAATTTATCTGCTGCTATCGGGCAGGCAGCATAGATCCAACGCATCCTGGTaGTCCTCCAAGGAAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RHVPPCPIYLLLSGRQHRSNASW*SSKETH Trigger: GTGGGTTTCCTTGGAGGAGCACCAGGATGCGTTGGA...TCTATGCTGCCTGCCCGATAGCAGCAGATAAATTGGGCATGGTGGCACATGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| CDS-3UTR GCA 90 bp | ATCGTCCACCTGAACAGCTCTCCGCATCACTGCTCCCATTTCACAGATTCTATCTCCAACGCATCCTGGTaGTCCTCCAAGGAAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IVHLNSSPHHCSHFTDSISNASW*SSKETH Trigger: GTGGGTTTCCTTGGAGGAGCACCAGGATGCGTTGGA...GATAGAATCTGTGAAATGGGAGCAGTGATGCGGAGAGCTGTTCAGGTGGACGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197601.2 |
||
| CDS-3UTR CCA 90 bp | GGGCAGAGAGTGGATATAGAAGGACAGGGAGATGAGTGGGATTGGGTTATAAGCAGTTCCAACGCATCCTaGTGCTCCTCCAAGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: GQRVDIEGQGDEWDWVISSSNAS*CSSKET Trigger: GGTTTCCTTGGAGGAGCACCAGGATGCGTTGGAACT...GCTTATAACCCAATCCCACTCATCTCCCTGTCCTTCTATATCCACTCTCTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| CDS-3UTR TCA 90 bp | TACCAAGTGGCAATTCTAAACTGCCACCCCATACCTCTACCCAACACTAAGTCATGGTTATCGTCCACCTaGACAGCTCTCCGCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: YQVAILNCHPIPLPNTKSWLSST*TALRIT Trigger: AGTGATGCGGAGAGCTGTTCAGGTGGACGATAACCA...TGACTTAGTGTTGGGTAGAGGTATGGGGTGGCAGTTTAGAATTGCCACTTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
||
| CDS-3UTR GCA 90 bp | AGATTCCGGACTAGAGTGACAAATGTCATCTCTGTCCCAGCAATGGGGGACTTGAGCTCTCCGCATCACTaGTCCCATTTCACAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RFRTRVTNVISVPAMGDLSSPHH*SHFTDS Trigger: AGAATCTGTGAAATGGGAGCAGTGATGCGGAGAGCT...CAAGTCCCCCATTGCTGGGACAGAGATGACATTTGTCACTCTAGTCCGGAATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
||
| 3UTR CAA 72 bp | GGCCTGCCTAGTACTGGTAATATTTGGGTTTTGCTTTaGTGGTGCCTGAGGTTTGAGCCAGGGCTTTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLPSTGNIWVLL*WCLRFEPGLCV Trigger: TACACAAAGCCCTGGCTCAAACCTCAGGCACCACAAAAGCAAAACCCAAATATTACCAGTACTAGGCAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| CDS-3UTR GCA 90 bp | ATCGTCCACCTGAACAGCTCTCCGCATCACTGCTCCCATTTCACAGATTCTATCATCAGTGTTTCTTACTaGAGAGTGAGACTGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IVHLNSSPHHCSHFTDSIISVSY*RVRLVS Trigger: GCTCACCAGTCTCACTCTGCAGTAAGAAACACTGAT...GATAGAATCTGTGAAATGGGAGCAGTGATGCGGAGAGCTGTTCAGGTGGACGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197601.2 |
||
| CDS-3UTR GCA 90 bp | TGGAAGGTCAGGAGGCAGCTAGCCTGGTGTATGTATACAGGAGGAAACAAGAGACTTTCTTTTCCAACCTaGAGAGATTCACTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: WKVRRQLAWCMYTGGNKRLSFPT*RDSLLM Trigger: CATCAGCAGTGAATCTCTGCAGGTTGGAAAAGAAAG...TCTCTTGTTTCCTCCTGTATACATACACCAGGCTAGCTGCCTCCTGACCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CAA 72 bp | AAGCCACCTAGAGAGGAGCAGGCAGTGGTAAAATGCTaGCCACACAAGTGTGAGGAATTGATTTTGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: KPPREEQAVVKC*PHKCEELILNP Trigger: GGGATTCAAAATCAATTCCTCACACTTGTGTGGCAAGCATTTTACCACTGCCTGCTCCTCTCTAGGTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| CDS-3UTR GCA 90 bp | TTAGTGGACAATGAATACCAAGTGGCAATTCTAAACTGCCACCCCATACCTCTAGTCCTTCACGTCGGATaGATCCTCTTGATACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVDNEYQVAILNCHPIPLVLHVG*ILLILL Trigger: GAGCAGTATCAAGAGGATGCATCCGACGTGAAGGAC...TAGAGGTATGGGGTGGCAGTTTAGAATTGCCACTTGGTATTCATTGTCCACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGATTCACTGCTGATGGACAGTAACTCTCGAAGTTCCTTATTTTCAAGCGTGAGCTTTCAGAACTaGTTCGGCATCCACGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CRDSLLMDSNSRSSLFSSVSFQN*FGIHGF Trigger: AAAGCCGTGGATGCCGAACCAGTTCTGAAAGCTCAC...GCTTGAAAATAAGGAACTTCGAGAGTTACTGTCCATCAGCAGTGAATCTCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197601.2 |
||
| 3UTR CAA 72 bp | TTGATTGTGAGCTGCCTGATGTGTTGGGAATCAAACTaGAGTCCTCTGCAAGAGCAGCATATTCTCTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: LIVSCLMCWESN*SPLQEQHILLT Trigger: TGTTAAGAGAATATGCTGCTCTTGCAGAGGACTCAAGTTTGATTCCCAACACATCAGGCAGCTCACAATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CAA 72 bp | TCTAGAATTACAATTGATTGTGAGCTGCCTGATGTGTaGGGAATCAAACTTGAGTCCTCTGCAAGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRITIDCELPDV*GIKLESSARAA Trigger: TGCTGCTCTTGCAGAGGACTCAAGTTTGATTCCCAACACATCAGGCAGCTCACAATCAATTGTAATTCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| CDS-3UTR TCA 90 bp | AGAATAGGAAGAAACACTTCAACCAGCTTCTCCCACATACCTTTATATAACAAATGGTTATCGTCCACCTaGACAGCTCTCCGCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: RIGRNTSTSFSHIPLYNKWLSST*TALRIT Trigger: AGTGATGCGGAGAGCTGTTCAGGTGGACGATAACCA...TTTGTTATATAAAGGTATGTGGGAGAAGCTGGTTGAAGTGTTTCTTCCTATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| CDS-3UTR CCA 90 bp | TGGGCAATTAACCTTGACATGATAATACAAATCAACTACAAATCTGCCTGGGTTGTGAGCTTTCAGAACTaGTTCGGCATCCACGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WAINLDMIIQINYKSAWVVSFQN*FGIHGF Trigger: AAAGCCGTGGATGCCGAACCAGTTCTGAAAGCTCAC...AACCCAGGCAGATTTGTAGTTGATTTGTATTATCATGTCAAGGTTAATTGCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| 3UTR CAA 72 bp | CATGAACATGTATACATACATTCAAAACAGGTGTTCTaGAGACAGGATCTCACTACACAGATACCAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HEHVYIHSKQVF*RQDLTTQIPGL Trigger: CAGGCCTGGTATCTGTGTAGTGAGATCCTGTCTCAAGAACACCTGTTTTGAATGTATGTATACATGTTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| CDS-3UTR GCA 90 bp | AGAATAGGAAGAAACACTTCAACCAGCTTCTCCCACATACCTTTATATAACAAAAGCTCTCCGCATCACTaGTCCCATTTCACAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIGRNTSTSFSHIPLYNKSSPHH*SHFTDS Trigger: AGAATCTGTGAAATGGGAGCAGTGATGCGGAGAGCT...TTTGTTATATAAAGGTATGTGGGAGAAGCTGGTTGAAGTGTTTCTTCCTATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
||
| CDS-3UTR GCA 90 bp | AAAAGTGTTCAGTGTTTCCAAGCTGTGAAAAACAACATTGAACTGCAGGTAACACTTTCTTTTCCAACCTaGAGAGATTCACTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KSVQCFQAVKNNIELQVTLSFPT*RDSLLM Trigger: CATCAGCAGTGAATCTCTGCAGGTTGGAAAAGAAAG...TGTTACCTGCAGTTCAATGTTGTTTTTCACAGCTTGGAAACACTGAACACTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
||
| CDS CCA 90 bp | CCCGCCTCCCGCATCGCCGCCACCCGCCGGTGCAGCGCAGCCGACTaGTCCACCAGCGACTCGGCCGCCGCATCGTGCTCGCGCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PASRIAATRRCSAAD*STSDSAAASCSRSR Trigger: GCGGCTGCGCGAGCACGATGCGGCGGCCGAGTCGCTGGTGGACCAGTCGGCTGCGCTGCACCGGCGGGTGGCGGCGATGCGGGAGGCGGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
||
| CDS GCA 90 bp | TGCAGCGCAGCCGACTGGTCCACCAGCGACTCGGCCGCCGCATCGTaGTCGCGCAGCCGCTCCAGCAGCGTCTTGGCGTCCGTCAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: CSAADWSTSDSAAAS*SRSRSSSVLASVKI Trigger: GATCTTGACGGACGCCAAGACGCTGCTGGAGCGGCTGCGCGAGCACGATGCGGCGGCCGAGTCGCTGGTGGACCAGTCGGCTGCGCTGCA 70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
||
| CDS-3UTR CAA 90 bp | GCTAGCACTCCAGACCTGCTCTGCTGCTCTTCTATGGAGCCAAACCCAGCAGCACGCTCCAGCAGCGTCTaGGCGTCCGTCAAGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASTPDLLCCSSMEPNPAARSSSV*ASVKIF Trigger: GAAGATCTTGACGGACGCCAAGACGCTGCTGGAGCG...TGCTGCTGGGTTTGGCTCCATAGAAGAGCAGCAGAGCAGGTCTGGAGTGCTAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| CDS-3UTR CAA 90 bp | ACGGCAGGAGAGGAGGGCACGGCTTCTCGCTCTGACGGGCAAGCTGTAGCCAGCATCTGTTTCCGGTACTaGCTCATGATCAGTTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: TAGEEGTASRSDGQAVASICFRY*LMISSN Trigger: GTTGGAACTGATCATGAGCAAGTACCGGAAACAGAT...GCTGGCTACAGCTTGCCCGTCAGAGCGAGAAGCCGTGCCCTCCTCTCCTGCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| CDS TCA 90 bp | ACAGCTCTCCGCATCACTGCTCCCATTTCACAGATTCTATCGATCTaGCTTTCAATCTCCTGCTCGGGTAACACGGCGCCCGCCTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: TALRITAPISQILSI*LSISCSGNTAPASR Trigger: GCGGGAGGCGGGCGCCGTGTTACCCGAGCAGGAGATTGAAAGTCAGATCGATAGAATCTGTGAAATGGGAGCAGTGATGCGGAGAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119450.2 |
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| CDS-3UTR CAA 90 bp | GTGACAAATGTCATCTCTGTCCCAGCAATGGGGGACTTGTCTAGTTTCACTAGTCGCTCCAGCAGCGTCTaGGCGTCCGTCAAGATCTTC | + |
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Preference number: 5 (lower is better) Translates to: VTNVISVPAMGDLSSFTSRSSSV*ASVKIF Trigger: GAAGATCTTGACGGACGCCAAGACGCTGCTGGAGCG...ACTAGTGAAACTAGACAAGTCCCCCATTGCTGGGACAGAGATGACATTTGTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
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| CDS-3UTR CAA 90 bp | TGGAAGGTCAGGAGGCAGCTAGCCTGGTGTATGTATACAGGAGGAAACAAGAGACTGAACCTTACAGAATaGGTTATCGTCCACCTGAAC | + |
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Preference number: 5 (lower is better) Translates to: WKVRRQLAWCMYTGGNKRLNLTE*VIVHLN Trigger: GTTCAGGTGGACGATAACCAATTCTGTAAGGTTCAG...TCTCTTGTTTCCTCCTGTATACATACACCAGGCTAGCTGCCTCCTGACCTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| CDS-3UTR CAA 90 bp | GCTGAGCTAGTCTCTCCTGAACCTTACAGAATTGGTTATCGTCCACCTGAACAGAATCTGGGTATTCTCTaGAGACAGCAGAATGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: AELVSPEPYRIGYRPPEQNLGIL*RQQNVR Trigger: CCTCACATTCTGCTGTCTCAAGAGAATACCCAGATT...CTGTTCAGGTGGACGATAACCAATTCTGTAAGGTTCAGGAGAGACTAGCTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197601.2 |
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| CDS GCA 90 bp | CTTACAGAATTGGTTATCGTCCACCTGAACAGCTCTCCGCATCACTaGTCCCATTTCACAGATTCTATCGATCTGACTTTCAATCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LTELVIVHLNSSPHH*SHFTDSIDLTFNLC Trigger: GCAGAGATTGAAAGTCAGATCGATAGAATCTGTGAAATGGGAGCAGTGATGCGGAGAGCTGTTCAGGTGGACGATAACCAATTCTGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| CDS GCA 90 bp | CTTACAGAATTGGTTATCGTCCACCTGAACAGCTCTCCGCATCACTaGTCCCATTTCACAGATTCTATCGATCTGACTTTCAATCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: LTELVIVHLNSSPHH*SHFTDSIDLTFNLL Trigger: CAGGAGATTGAAAGTCAGATCGATAGAATCTGTGAAATGGGAGCAGTGATGCGGAGAGCTGTTCAGGTGGACGATAACCAATTCTGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119450.2 |
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| CDS-3UTR CAA 90 bp | TACCAAGTGGCAATTCTAAACTGCCACCCCATACCTCTACCCAACACTAAGTCACTGAACCTTACAGAATaGGTTATCGTCCACCTGAAC | + |
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Preference number: 5 (lower is better) Translates to: YQVAILNCHPIPLPNTKSLNLTE*VIVHLN Trigger: GTTCAGGTGGACGATAACCAATTCTGTAAGGTTCAG...TGACTTAGTGTTGGGTAGAGGTATGGGGTGGCAGTTTAGAATTGCCACTTGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
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| CDS-3UTR CAA 90 bp | TGGGCAATTAACCTTGACATGATAATACAAATCAACTACAAATCTGCCTGGGTTAATCTGGGTATTCTCTaGAGACAGCAGAATGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: WAINLDMIIQINYKSAWVNLGIL*RQQNVR Trigger: CCTCACATTCTGCTGTCTCAAGAGAATACCCAGATT...AACCCAGGCAGATTTGTAGTTGATTTGTATTATCATGTCAAGGTTAATTGCCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| CDS GCA 72 bp | GCCGACTGGTCCACCAGCGACTCGGCCGCCGCATCGTaGTCGCGCAGCCGCTCCAGCAGCGTCTTGGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: ADWSTSDSAAAS*SRSRSSSVLAS Trigger: GGACGCCAAGACGCTGCTGGAGCGGCTGCGCGAGCACGATGCGGCGGCCGAGTCGCTGGTGGACCAGTCGGC 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
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| CDS CAA 72 bp | GCCGCATCGTGCTCGCGCAGCCGCTCCAGCAGCGTCTaGGCGTCCGTCAAGATCTTCTCGATCGTGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: AASCSRSRSSSV*ASVKIFSIVQL Trigger: GAGCTGCACGATCGAGAAGATCTTGACGGACGCCAAGACGCTGCTGGAGCGGCTGCGCGAGCACGATGCGGC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
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| CDS CCA 72 bp | CCGCATCGTGCTCGCGCAGCCGCTCCAGCAGCGTCTTaGCGTCCGTCAAGATCTTCTCGATCGTGCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PHRARAAAPAAS*RPSRSSRSCSS Trigger: TGAGCTGCACGATCGAGAAGATCTTGACGGACGCCAAGACGCTGCTGGAGCGGCTGCGCGAGCACGATGCGG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000119450.2 |
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| CDS TCA 72 bp | TATTTAGACATGTCCTTCACGTCGGATGCATCCTCTTaGTACTGCTCGGGTAACACGGCGCCCGCCTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: YLDMSFTSDASS*YCSGNTAPASR Trigger: GCGGGAGGCGGGCGCCGTGTTACCCGAGCAGTATCAAGAGGATGCATCCGACGTGAAGGACATGTCTAAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029447.12 |
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| CDS TCA 72 bp | CGCATCACTGCTCCCATTTCACAGATTCTATCGATCTaGCTTTCAATCTCCTGCTCGGGTAACACGGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: RITAPISQILSI*LSISCSGNTAP Trigger: GGGCGCCGTGTTACCCGAGCAGGAGATTGAAAGTCAGATCGATAGAATCTGTGAAATGGGAGCAGTGATGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119450.2 |
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| CDS CAA 90 bp | ACGGCTTTCTTAGCGACCATTAACTGTAACATCTGTTTCCGGTACTaGCTCATGATCAGTTCCAACGCATCCTGGTGCTCCTCCAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: TAFLATINCNICFRY*LMISSNASWCSSKE Trigger: TTCCTTGGAGGAGCACCAGGATGCGTTGGAACTGATCATGAGCAAGTACCGGAAACAGATGTTACAGTTAATGGTCGCTAAGAAAGCCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000197601.2 |
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| CDS CAA 72 bp | TTAGCGACCATTAACTGTAACATCTGTTTCCGGTACTaGCTCATGATCAGTTCCAACGCATCCTGGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LATINCNICFRY*LMISSNASWCS Trigger: GGAGCACCAGGATGCGTTGGAACTGATCATGAGCAAGTACCGGAAACAGATGTTACAGTTAATGGTCGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029447.12 ENSMUST00000197601.2 |
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