Pregenerated sensors for SIK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037112Ensembl transcript IDs: ENSMUST00000041375.11, ENSMUST00000176491.8, ENSMUST00000176663.8, ENSMUST00000176824.8
Found 542 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGGGCTGGGCTGCGGGCCAGGATGGCTCTCCGGAGACTTCCCATaGCTAGTCTTCCCTTGCCTGCCTGGACACTTACTACAGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: AGLGCGPGWLSGDFP*LVFPCLPGHLLQRG Trigger: TCCTCTCTGTAGTAAGTGTCCAGGCAGGCAAGGGAAGACTAGGCATGGGAAGTCTCCGGAGAGCCATCCTGGCCCGCAGCCCAGCCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR CCA 90 bp | GGGCCCAAGTTCCTGAGGCTCCCTGGTTTCTGCCTCAGCCTCCACTaGGATGAGGCTCCTGTTGTTACAGGTGAGGGCTCTGGAACCCTG | + |
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Preference number: 1 (lower is better) Translates to: GPKFLRLPGFCLSLH*DEAPVVTGEGSGTL Trigger: CAGGGTTCCAGAGCCCTCACCTGTAACAACAGGAGCCTCATCCCAGTGGAGGCTGAGGCAGAAACCAGGGAGCCTCAGGAACTTGGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR GCA 90 bp | TGGCTTCCCAGCACAGGGCCCAAGTTCCTGAGGCTCCCTGGTTTCTaGCTCAGCCTCCACTGGGATGAGGCTCCTGTTGTTACAGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: WLPSTGPKFLRLPGF*LSLHWDEAPVVTGE Trigger: CTCACCTGTAACAACAGGAGCCTCATCCCAGTGGAGGCTGAGGCAGAAACCAGGGAGCCTCAGGAACTTGGGCCCTGTGCTGGGAAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR CCA 90 bp | GCCCAATTCCAAGCAGAGCGCATTTCCAAAGCAGCCTGGCACCAGTaGGGAGCCCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGC | + |
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Preference number: 1 (lower is better) Translates to: AQFQAERISKAAWHQ*GAQQLQSLASLKDC Trigger: GCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGGGCTCCCCACTGGTGCCAGGCTGCTTTGGAAATGCGCTCTGCTTGGAATTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR CCA 90 bp | GCCATAGCTGCTAGGTCTCCCGGGCTAAGCAGCTCACAACCCTGTTaGGGGACAGGGGTTTATGCCAATCTGCTGTGGTCTGATCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: AIAARSPGLSSSQPC*GTGVYANLLWSDPA Trigger: TGCAGGATCAGACCACAGCAGATTGGCATAAACCCCTGTCCCCCAACAGGGTTGTGAGCTGCTTAGCCCGGGAGACCTAGCAGCTATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR GCA 90 bp | GGGCCAGGATGGCTCTCCGGAGACTTCCCATGCCTAGTCTTCCCTTaGCTGCCTGGACACTTACTACAGAGAGGAAAGGCAACTTATAGG | + |
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Preference number: 1 (lower is better) Translates to: GPGWLSGDFPCLVFP*LPGHLLQRGKATYR Trigger: CCTATAAGTTGCCTTTCCTCTCTGTAGTAAGTGTCCAGGCAGGCAAGGGAAGACTAGGCATGGGAAGTCTCCGGAGAGCCATCCTGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR GCA 90 bp | GTGTTATTGCGTGCTCCCAGACAGGGTTCTGGGATCAGTACCAGCTaGTACTCAAGTGTCCTGGAAACACAACTTAGGCTCTGCTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: VLLRAPRQGSGISTS*YSSVLETQLRLCCF Trigger: AAAGCAGCAGAGCCTAAGTTGTGTTTCCAGGACACTTGAGTAGCAGCTGGTACTGATCCCAGAACCCTGTCTGGGAGCACGCAATAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR GCA 90 bp | AGTACCAGCTGCTACTCAAGTGTCCTGGAAACACAACTTAGGCTCTaGTGCTTTGTGATGGTCTTGAGGACACCCTGCATCAACATCTTG | + |
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Preference number: 1 (lower is better) Translates to: STSCYSSVLETQLRL*CFVMVLRTPCINIL Trigger: CAAGATGTTGATGCAGGGTGTCCTCAAGACCATCACAAAGCAGCAGAGCCTAAGTTGTGTTTCCAGGACACTTGAGTAGCAGCTGGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR GCA 90 bp | ACCAGCTGCTACTCAAGTGTCCTGGAAACACAACTTAGGCTCTGCTaGTTTGTGATGGTCTTGAGGACACCCTGCATCAACATCTTGATA | + |
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Preference number: 1 (lower is better) Translates to: TSCYSSVLETQLRLC*FVMVLRTPCINILI Trigger: TATCAAGATGTTGATGCAGGGTGTCCTCAAGACCATCACAAAGCAGCAGAGCCTAAGTTGTGTTTCCAGGACACTTGAGTAGCAGCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR TCA 90 bp | AAGGAGTGTGATGAGCTGGGGAAGGCACACACTACACAGGGCATGTaGAAGTTCCTTTGTTGTGCGTCTTTAAAATGTCTAAGCCCTGTA | + |
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Preference number: 1 (lower is better) Translates to: KECDELGKAHTTQGM*KFLCCASLKCLSPV Trigger: TACAGGGCTTAGACATTTTAAAGACGCACAACAAAGGAACTTTCACATGCCCTGTGTAGTGTGTGCCTTCCCCAGCTCATCACACTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR TCA 90 bp | AACAAAGCTAAGGGTTACTATACAGTAGTGTACACACTGCTGATGTaGACCGACAGGCAGACACGTCAGTATTACAAAGCTGCCTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: NKAKGYYTVVYTLLM*TDRQTRQYYKAASP Trigger: TGGAGAGGCAGCTTTGTAATACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAGTAACCCTTAGCTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR TCA 90 bp | AGGTCTATGCTGTCACTTTATACAAACATTTGTTGGTTCCTCCTTTaGGAGCTTGCTCCATGTTACCTTAGGGCATACACTCCCGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: RSMLSLYTNICWFLL*ELAPCYLRAYTPAS Trigger: GGAAGCGGGAGTGTATGCCCTAAGGTAACATGGAGCAAGCTCTCAAAGGAGGAACCAACAAATGTTTGTATAAAGTGACAGCATAGACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR TCA 90 bp | TGTGATGGTCTTGAGGACACCCTGCATCAACATCTTGATATGCCTTaGAGTACTTTGCTGTTGCCTAGCCTGGCTTTAGGGAAATGTATC | + |
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Preference number: 1 (lower is better) Translates to: CDGLEDTLHQHLDMP*STLLLPSLALGKCI Trigger: GATACATTTCCCTAAAGCCAGGCTAGGCAACAGCAAAGTACTTCAAGGCATATCAAGATGTTGATGCAGGGTGTCCTCAAGACCATCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR GCA 90 bp | TTCAATCTGGAAGGCATTTTCATTTTGTCAATATTACAGCACTTGTaGAGTAAATGCTGGGACAACATTCTCCTTCAGTCTAAAGAAATC | + |
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Preference number: 1 (lower is better) Translates to: FNLEGIFILSILQHL*SKCWDNILLQSKEI Trigger: GATTTCTTTAGACTGAAGGAGAATGTTGTCCCAGCATTTACTGCACAAGTGCTGTAATATTGACAAAATGAAAATGCCTTCCAGATTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGAAGCTTCCATGAGTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGTGGCAGGGGCTGAGCTaGGCTGGGCTGCGGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LGSFHESLGGGRHRSNQMWQGLS*AGLRAR Trigger: CCTGGCCCGCAGCCCAGCCCAGCTCAGCCCCTGCCA...CATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGACTCATGGAAGCTTCCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR TCA 90 bp | TGCCTGCCCAACGTGCAAAGCTCCATAAGCTCAGGACAGCACGGTGGGGAGCAGCAGCCTCCACTGGGATaGGGCTCCTGTTGTTACAGG | + |
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Preference number: 2 (lower is better) Translates to: CLPNVQSSISSGQHGGEQQPPLG*GSCCYR Trigger: CCTGTAACAACAGGAGCCTCATCCCAGTGGAGGCTG...CTGCTCCCCACCGTGCTGTCCTGAGCTTATGGAGCTTTGCACGTTGGGCAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTCTGATCCTGCAGTCCTaGAATGAGCAGCCCCCATTT | + |
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Preference number: 2 (lower is better) Translates to: KATVLTSSLCQCLTGLAALILQS*NEQPPF Trigger: AAATGGGGGCTGCTCATTTCAGGACTGCAGGATCAG...AGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR CCA 90 bp | GGATCACCAGTCTCTTTGGAGAGGCTAGTTTACAGTAACAAAGCTAAGGGTTACGGGGCTGAGCTGGGCTaGGCTGCGGGCCAGGATGGC | + |
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Preference number: 2 (lower is better) Translates to: GSPVSLERLVYSNKAKGYGAELG*AAGQDG Trigger: GCCATCCTGGCCCGCAGCCCAGCCCAGCTCAGCCCC...GTAACCCTTAGCTTTGTTACTGTAAACTAGCCTCTCCAAAGAGACTGGTGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCTCCTGCTATCTACTCCTGCTGTAACCCACAGCCCAATTCCAAGCAGAGCGTTGAGTCACCAACACTaGCAGGGGCTGAGCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SLLLSTPAVTHSPIPSRALSHQH*QGLSWA Trigger: AGCCCAGCTCAGCCCCTGCCAGTGTTGGTGACTCAA...CGCTCTGCTTGGAATTGGGCTGTGGGTTACAGCAGGAGTAGATAGCAGGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGCTTGGAAGCTTCCATaGGTCACTAGGTGGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: AAFKLLTASPQPLICCLTAWKLP*VTRWGQ Trigger: CTGCCCCCACCTAGTGACTCATGGAAGCTTCCAAGC...AGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTCAATCTGCTGTGGTCTaGTCCTGCAGTCCTGAAATG | + |
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Preference number: 2 (lower is better) Translates to: SSLCQCLTGLAADERSQLQSAVV*SCSPEM Trigger: CATTTCAGGACTGCAGGATCAGACCACAGCAGATTG...AAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR CCA 90 bp | GCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGTGGCAGGGGCTGAGCTaGGCTGGGCTGCGGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ALFAEWKFYLMFGSPVSLWQGLS*AGLRAR Trigger: CCTGGCCCGCAGCCCAGCCCAGCTCAGCCCCTGCCA...CAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTAACAACTACAGTCTCTaGCCAGCCTCAAGGACTGCT | + |
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Preference number: 2 (lower is better) Translates to: SSLCQCLTGLAADERSQLNNYSL*PASRTA Trigger: AGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTT...AAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTCCTGCATCAACATCTTaGTATGCCTTGAAGTACTTT | + |
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Preference number: 2 (lower is better) Translates to: KATVLTSSLCQCLTGLAAPASTS*YALKYF Trigger: AAAGTACTTCAAGGCATATCAAGATGTTGATGCAGG...AGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTTTCCCTCCCACTATGTaGTATATACAACACACAATT | + |
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Preference number: 2 (lower is better) Translates to: KATVLTSSLCQCLTGLAAFPPTM*YIQHTI Trigger: AATTGTGTGTTGTATATATCACATAGTGGGAGGGAA...AGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR-3UTR CCA 90 bp | AGACAGGGTTCTGGGATCAGTACCAGCTGCTACTCAAGTGTCCTGGAAACACAAGAAGGAAGGAGGAAATaGGAGCTTACGACAGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: RQGSGISTSCYSSVLETQEGRRK*ELTTGS Trigger: GGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTC...TTGTGTTTCCAGGACACTTGAGTAGCAGCTGGTACTGATCCCAGAACCCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR CAA 90 bp | GCTGGGGAAGGCACACACTACACAGGGCATGTGAAAGTTCCTTTGTaGTGCGTCTTTAAAATGTCTAAGCCCTGTATGAAACTGCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: AGEGTHYTGHVKVPL*CVFKMSKPCMKLPA Trigger: GGCAGGCAGTTTCATACAGGGCTTAGACATTTTAAAGACGCACAACAAAGGAACTTTCACATGCCCTGTGTAGTGTGTGCCTTCCCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTATACAACACACAATTTaGCTTGCTTTCACCAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: SSLCQCLTGLAADERSQLIQHTI*LAFTKV Trigger: TACCTTGGTGAAAGCAAGGCAAATTGTGTGTTGTAT...AAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR-3UTR CCA 90 bp | CTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCGCACTTTTTGCCGAATaGAAATTTTACCTCATGTTT | + |
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Preference number: 2 (lower is better) Translates to: LTSSLCQCLTGLAADERSALFAE*KFYLMF Trigger: AAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGC...GGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR CCA 90 bp | CTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTGCAGCCTGGCACCAGTaGGGAGCCCAACAACTACAG | + |
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Preference number: 2 (lower is better) Translates to: LSLLSVTLVLVRRKGLEAAAWHQ*GAQQLQ Trigger: CTGTAGTTGTTGGGCTCCCCACTGGTGCCAGGCTGC...AGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAGCTCACAACCCTGTTaGGGGACAGGGGTTTATGCC | + |
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Preference number: 2 (lower is better) Translates to: SPRESLSLLSVTLVLVRRSSQPC*GTGVYA Trigger: GGCATAAACCCCTGTCCCCCAACAGGGTTGTGAGCT...TCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR TCA 90 bp | AGTAAATGCTGGGACAACATTCTCCTTCAGTCTAAAGAAATCAAGCCCCACTTTGCTTGGAAGCTTCCATaGGTCACTAGGTGGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SKCWDNILLQSKEIKPHFAWKLP*VTRWGQ Trigger: CTGCCCCCACCTAGTGACTCATGGAAGCTTCCAAGC...AAAGTGGGGCTTGATTTCTTTAGACTGAAGGAGAATGTTGTCCCAGCATTTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR TCA 90 bp | GCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGGCCTCAAGGACTGCTTaGGTCACCAACACTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: ALFAEWKFYLMFGSPVSLASRTA*VTNTGR Trigger: CCTGCCAGTGTTGGTGACTCAAGCAGTCCTTGAGGC...CAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGGAAGCTTCCATGAGTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGCACTTGTGCAGTAAATaGTGGGACAACATTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LGSFHESLGGGRHRSNQMHLCSK*WDNILL Trigger: AAGGAGAATGTTGTCCCAGCATTTACTGCACAAGTG...CATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGACTCATGGAAGCTTCCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTGCCTCAAGGACTGCTTaGGTCACCAACACTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LHFLPNGNFTSCLDHQSLASRTA*VTNTGR Trigger: CCTGCCAGTGTTGGTGACTCAAGCAGTCCTTGAGGC...AAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGGATCACCAGTCTCTTTGGAGAGGCTAGTTTACAGTAACAAAGCTAAGGGTACCCTAGTCAAACCCTaGTTCCAGTTGGGAAACCCG | + |
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Preference number: 2 (lower is better) Translates to: FGSPVSLERLVYSNKAKGTLVKP*FQLGNP Trigger: CGGGTTTCCCAACTGGAATCAGGGTTTGACTAGGGT...ACCCTTAGCTTTGTTACTGTAAACTAGCCTCTCCAAAGAGACTGGTGATCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGCTTCCCTTGCCTGCCTaGACACTTACTACAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: ESLSLLSVTLVLVRRKGLLPLPA*TLTTER Trigger: CCTCTCTGTAGTAAGTGTCCAGGCAGGCAAGGGAAG...CAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR CCA 90 bp | CCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAACTTCCCTTGCCTGCCTaGACACTTACTACAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PRESLSLLSVTLVLVRRKLPLPA*TLTTER Trigger: CCTCTCTGTAGTAAGTGTCCAGGCAGGCAAGGGAAG...TTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR CAA 90 bp | AGTGTCCTGGAAACACAACTTAGGCTCTGCTGCTTTGTGATGGTCTaGAGGACACCCTGCATCAACATCTTGATATGCCTTGAAGTACTT | + |
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Preference number: 2 (lower is better) Translates to: SVLETQLRLCCFVMV*RTPCINILICLEVL Trigger: AAGTACTTCAAGGCATATCAAGATGTTGATGCAGGGTGTCCTCAAGACCATCACAAAGCAGCAGAGCCTAAGTTGTGTTTCCAGGACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGCACTTTTTGCCGAATaGAAATTTTACCTCATGTTT | + |
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Preference number: 2 (lower is better) Translates to: AAFKLLTASPQPLICCLTALFAE*KFYLMF Trigger: AAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGC...AGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGAAGCTTCCATGAGTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGCCCCACTTTATAACTTaGCTTATTTTGCAAAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LGSFHESLGGGRHRSNQMPHFIT*LILQSF Trigger: AAAGCTTTGCAAAATAAGCCAAGTTATAAAGTGGGG...CATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGACTCATGGAAGCTTCCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAATTGAGAAGGTGTTATTaGGTGCTCCCAGACAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: SLSLLSVTLVLVRRKGLELRRCY*VLPDRV Trigger: AACCCTGTCTGGGAGCACGCAATAACACCTTCTCAA...TTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR CAA 90 bp | ATGGAGAATTCAGATCCCACATGGTGGAAACAGATTCAAGAACCTTaGGGTTTAGCAGGACATAACTGGAAAGCTTGGTTCCTAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: MENSDPTWWKQIQEP*GLAGHNWKAWFLEK Trigger: TTTCTCTAGGAACCAAGCTTTCCAGTTATGTCCTGCTAAACCCAAAGGTTCTTGAATCTGTTTCCACCATGTGGGATCTGAATTCTCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTTCCCTACATTCTAGCCCTTaGCACAGAAAATTCTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: SLLSVTLVLVRRKGLEASLHSSP*HRKFCG Trigger: ACCACAGAATTTTCTGTGCCAAGGGCTAGAATGTAG...GGAAGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR CAA 90 bp | TTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTaGGAGAGGCTAGTTTACAGTAACAAAGCTAAGGGTTACTATACA | + |
|
Preference number: 2 (lower is better) Translates to: FAEWKFYLMFGSPVS*ERLVYSNKAKGYYT Trigger: TGTATAGTAACCCTTAGCTTTGTTACTGTAAACTAGCCTCTCCAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR GCA 72 bp | GGCTGCGGGCCAGGATGGCTCTCCGGAGACTTCCCATaGCTAGTCTTCCCTTGCCTGCCTGGACACTTACTA | + |
|
Preference number: 3 (lower is better) Translates to: GCGPGWLSGDFP*LVFPCLPGHLL Trigger: TAGTAAGTGTCCAGGCAGGCAAGGGAAGACTAGGCATGGGAAGTCTCCGGAGAGCCATCCTGGCCCGCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR GCA 72 bp | AGCACAGGGCCCAAGTTCCTGAGGCTCCCTGGTTTCTaGCTCAGCCTCCACTGGGATGAGGCTCCTGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: STGPKFLRLPGF*LSLHWDEAPVV Trigger: AACAACAGGAGCCTCATCCCAGTGGAGGCTGAGGCAGAAACCAGGGAGCCTCAGGAACTTGGGCCCTGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCAGCTCACAACCCTGTaGGGGGACAGGGGTTTATGC | + |
|
Preference number: 3 (lower is better) Translates to: TSSLCQCLTGLAADERSQQLTTL*GDRGLC Trigger: GCATAAACCCCTGTCCCCCAACAGGGTTGTGAGCTG...CTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | GACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTGCTGCAGCCCCTCATCTGTaGCCTAACTGTCCTGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: DSLSAAPHLLPNCPAIAAAAPHL*PNCPAI Trigger: TATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGC...AGCAGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR CCA 72 bp | TTCCTGAGGCTCCCTGGTTTCTGCCTCAGCCTCCACTaGGATGAGGCTCCTGTTGTTACAGGTGAGGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FLRLPGFCLSLH*DEAPVVTGEGS Trigger: AGAGCCCTCACCTGTAACAACAGGAGCCTCATCCCAGTGGAGGCTGAGGCAGAAACCAGGGAGCCTCAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTATGCCTAGTCTTCCCTaGCCTGCCTGGACACTTACT | + |
|
Preference number: 3 (lower is better) Translates to: KATVLTSSLCQCLTGLAAMPSLP*PAWTLT Trigger: AGTAAGTGTCCAGGCAGGCAAGGGAAGACTAGGCAT...AGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR GCA 72 bp | CTCGGCCATCCAGGGGCACTGTTGAGAAGGTGTTATTaGGTGCTCCCAGACAGGGTTCTGGGATCAGTACCA | + |
|
Preference number: 3 (lower is better) Translates to: LGHPGALLRRCY*VLPDRVLGSVP Trigger: TGGTACTGATCCCAGAACCCTGTCTGGGAGCACGCAATAACACCTTCTCAACAGTGCCCCTGGATGGCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR CCA 72 bp | ACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTaGAGGGCCCATTGCTCTCACCAGCTTCCACCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TRWGQTQKQSDE*RAHCSHQLPPQ Trigger: CTGAGGTGGAAGCTGGTGAGAGCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGGCAGCCCCTCATCTGTaGCCTAACTGTCCTGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: ERSQLLSAAFKLLTASPQAAPHL*PNCPAI Trigger: TATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGC...CTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCAGCCCCTCATCTGTaGCCTAACTGTCCTGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: LHKATVLTSSLCQCLTGLAAPHL*PNCPAI Trigger: TATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGC...CAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGTGAGGAGAAAAGGCTaGGAAGCTTCCATGAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: HKATVLTSSLCQCLTGLAVRRKG*EASMSH Trigger: GTGACTCATGGAAGCTTCCAAGCCTTTTCTCCTCAC...GGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTTCCAGCTCACAACCCTGTaGGGGGACAGGGGTTTATGC | + |
|
Preference number: 3 (lower is better) Translates to: ERKEGGNGSLRQVPAGWFQLTTL*GDRGLC Trigger: GCATAAACCCCTGTCCCCCAACAGGGTTGTGAGCTG...GAACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAACCCACAGCCCAATTCCAAGCAGAGCGCATTTCCAAAGCAGCCTGGCACCAATGCCTAGTCTTCCCTaGCCTGCCTGGACACTTACT | + |
|
Preference number: 3 (lower is better) Translates to: VTHSPIPSRAHFQSSLAPMPSLP*PAWTLT Trigger: AGTAAGTGTCCAGGCAGGCAAGGGAAGACTAGGCAT...TGGTGCCAGGCTGCTTTGGAAATGCGCTCTGCTTGGAATTGGGCTGTGGGTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTGCCCAACGTGCAAAGCTCCATAAGCTCAGGACAGCACGGTGGGGAGCAGTTGTTGGTTCCTCCTTaGAGAGCTTGCTCCATGTTA | + |
|
Preference number: 3 (lower is better) Translates to: CLPNVQSSISSGQHGGEQLLVPP*RACSML Trigger: TAACATGGAGCAAGCTCTCAAAGGAGGAACCAACAA...CTGCTCCCCACCGTGCTGTCCTGAGCTTATGGAGCTTTGCACGTTGGGCAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR GCA 72 bp | CGTGCTCCCAGACAGGGTTCTGGGATCAGTACCAGCTaGTACTCAAGTGTCCTGGAAACACAACTTAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RAPRQGSGISTS*YSSVLETQLRL Trigger: GAGCCTAAGTTGTGTTTCCAGGACACTTGAGTAGCAGCTGGTACTGATCCCAGAACCCTGTCTGGGAGCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGAGTAGCTCTCTTCTaGTGCTTTAAGGAAGACGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGLHKATVLTSSLCQCLTGVALF*CFKEDA Trigger: AGCGTCTTCCTTAAAGCACAAGAAGAGAGCTACTCC...TGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCTGGAGTAGCTCTCTTCTaGTGCTTTAAGGAAGACGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLGGGRHRSNQMSGGPIAGVALF*CFKEDA Trigger: AGCGTCTTCCTTAAAGCACAAGAAGAGAGCTACTCC...AGCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTGCCCAACGTGCAAAGCTCCATAAGCTCAGGACAGCACGGTGGGGAGCAGTATACAACACACAATTaGCCTTGCTTTCACCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CLPNVQSSISSGQHGGEQYTTHN*PCFHQG Trigger: ACCTTGGTGAAAGCAAGGCAAATTGTGTGTTGTATA...CTGCTCCCCACCGTGCTGTCCTGAGCTTATGGAGCTTTGCACGTTGGGCAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAAGGAGTAGCTCTCTTCTaGTGCTTTAAGGAAGACGCT | + |
|
Preference number: 3 (lower is better) Translates to: LTGLAADERSQLLSAAFKGVALF*CFKEDA Trigger: AGCGTCTTCCTTAAAGCACAAGAAGAGAGCTACTCC...TTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGGCCCCACTTTATAACTaGGCTTATTTTGCAAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TSSLCQCLTGLAADERSQAPLYN*AYFAKL Trigger: AAGCTTTGCAAAATAAGCCAAGTTATAAAGTGGGGC...CTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR CCA 72 bp | GGCATACACTCCCGCTTCCAACTACATTCTAGCCCTTaGCACAGAAAATTCTGTGGTAGGACAGAGCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GIHSRFQLHSSP*HRKFCGRTEPG Trigger: TCCTGGCTCTGTCCTACCACAGAATTTTCTGTGCCAAGGGCTAGAATGTAGTTGGAAGCGGGAGTGTATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR GCA 72 bp | TGCTACTCAAGTGTCCTGGAAACACAACTTAGGCTCTaGTGCTTTGTGATGGTCTTGAGGACACCCTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: CYSSVLETQLRL*CFVMVLRTPCI Trigger: GATGCAGGGTGTCCTCAAGACCATCACAAAGCAGCAGAGCCTAAGTTGTGTTTCCAGGACACTTGAGTAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAGCAGCCCCTCATCTGTaGCCTAACTGTCCTGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: SPRESLSLLSVTLVLVRRAAPHL*PNCPAI Trigger: TATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGC...TCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR TCA 72 bp | TTTATGCCAATCTGCTGTGGTCTGATCCTGCAGTCCTaGAATGAGCAGCCCCCATTTTCAATCTGGAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: FMPICCGLILQS*NEQPPFSIWKA Trigger: TGCCTTCCAGATTGAAAATGGGGGCTGCTCATTTCAGGACTGCAGGATCAGACCACAGCAGATTGGCATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR TCA 72 bp | CTTGAGGACACCCTGCATCAACATCTTGATATGCCTTaGAGTACTTTGCTGTTGCCTAGCCTGGCTTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LEDTLHQHLDMP*STLLLPSLALG Trigger: CCCTAAAGCCAGGCTAGGCAACAGCAAAGTACTTCAAGGCATATCAAGATGTTGATGCAGGGTGTCCTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR GCA 72 bp | TACTCAAGTGTCCTGGAAACACAACTTAGGCTCTGCTaGTTTGTGATGGTCTTGAGGACACCCTGCATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: YSSVLETQLRLC*FVMVLRTPCIN Trigger: GTTGATGCAGGGTGTCCTCAAGACCATCACAAAGCAGCAGAGCCTAAGTTGTGTTTCCAGGACACTTGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTAAGCAGCTCACAACCCTGTTGGGGGACAGGGGTTTATGCCAATCTGCTGTGCATGTGAAAGTTCCTTaGTTGTGCGTCTTTAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: AKQLTTLLGDRGLCQSAVHVKVP*LCVFKM Trigger: CATTTTAAAGACGCACAACAAAGGAACTTTCACATG...CACAGCAGATTGGCATAAACCCCTGTCCCCCAACAGGGTTGTGAGCTGCTTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR GCA 72 bp | ATGGTCTTGAGGACACCCTGCATCAACATCTTGATATaGCTTGAAGTACTTTGCTGTTGCCTAGCCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: MVLRTPCINILI*LEVLCCCLAWL Trigger: AAGCCAGGCTAGGCAACAGCAAAGTACTTCAAGGCATATCAAGATGTTGATGCAGGGTGTCCTCAAGACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR TCA 72 bp | GATGAGCTGGGGAAGGCACACACTACACAGGGCATGTaGAAGTTCCTTTGTTGTGCGTCTTTAAAATGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: DELGKAHTTQGM*KFLCCASLKCL Trigger: TAGACATTTTAAAGACGCACAACAAAGGAACTTTCACATGCCCTGTGTAGTGTGTGCCTTCCCCAGCTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR GCA 72 bp | TCTAGAGGCAGCATCTGTGGAGTAGCTCTCTTCTTGTaGTTTAAGGAAGACGCTTTGTGCTTAGTGCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: SRGSICGVALFL*FKEDALCLVHS Trigger: TGAATGCACTAAGCACAAAGCGTCTTCCTTAAAGCACAAGAAGAGAGCTACTCCACAGATGCTGCCTCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR TCA 72 bp | AAGGGTTACTATACAGTAGTGTACACACTGCTGATGTaGACCGACAGGCAGACACGTCAGTATTACAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KGYYTVVYTLLM*TDRQTRQYYKA Trigger: AGCTTTGTAATACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAGTAACCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTCCTCCTTTGAGAGCTaGCTCCATGTTACCTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LHFLPNGNFTSCLDHQSLSSFES*LHVTLG Trigger: CCCTAAGGTAACATGGAGCAAGCTCTCAAAGGAGGA...AAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR GCA 72 bp | ACACACTACACAGGGCATGTGAAAGTTCCTTTGTTGTaGGTCTTTAAAATGTCTAAGCCCTGTATGAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: THYTGHVKVPLL*VFKMSKPCMKL Trigger: CAGTTTCATACAGGGCTTAGACATTTTAAAGACGCACAACAAAGGAACTTTCACATGCCCTGTGTAGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR-3UTR CAA 90 bp | GGATCACCAGTCTCTTTGGAGAGGCTAGTTTACAGTAACAAAGCTAAGGGTTACTTATACAAACATTTGTaGGTTCCTCCTTTGAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GSPVSLERLVYSNKAKGYLYKHL*VPPLRA Trigger: AGCTCTCAAAGGAGGAACCAACAAATGTTTGTATAA...GTAACCCTTAGCTTTGTTACTGTAAACTAGCCTCTCCAAAGAGACTGGTGATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR TCA 72 bp | ACAACACACAATTTGCCTTGCTTTCACCAAGGTAAATaGATCTTTGGTGTAAAACCTAGGTCTATGCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TTHNLPCFHQGK*IFGVKPRSMLS Trigger: TGACAGCATAGACCTAGGTTTTACACCAAAGATTCATTTACCTTGGTGAAAGCAAGGCAAATTGTGTGTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| 3UTR GCA 72 bp | GAAGGCATTTTCATTTTGTCAATATTACAGCACTTGTaGAGTAAATGCTGGGACAACATTCTCCTTCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: EGIFILSILQHL*SKCWDNILLQS Trigger: AGACTGAAGGAGAATGTTGTCCCAGCATTTACTGCACAAGTGCTGTAATATTGACAAAATGAAAATGCCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTCCACCTCCGTCTTGGTaGTCCGGTGCCGCCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KATVLTSSLCQCLTGLAAPPPSW*SGAAPA Trigger: AGCTGGGGCGGCACCGGATCACCAAGACGGAGGTGG...AGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTCGGACTGGCCCGCGCTaGAAGTGCCTCGGGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLCQCLTGLAADERSQLRTGPR*KCLGPS Trigger: GGATGGCCCGAGGCACTTGCAGCGCGGGCCAGTCCG...AAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGAACCCCACCCGGACTaGCCCGCGCTGCAAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KATVLTSSLCQCLTGLAAEPHPD*PALQVP Trigger: AGGCACTTGCAGCGCGGGCCAGTCCGGGTGGGGTTC...AGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTGCTGAACCCCACCCGGACTaGCCCGCGCTGCAAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DSLSAAPHLLPNCPAIAAEPHPD*PALQVP Trigger: AGGCACTTGCAGCGCGGGCCAGTCCGGGTGGGGTTC...AGCAGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GGCACCAGTGGGGAGCCCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTGGTTGGAGCAGCTCCTaGCTGCTGTGGTGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTSGEPNNYSLWPASRTAGWSSS*LLWWRG Trigger: CCCCCTCCACCACAGCAGCCAGGAGCTGCTCCAACC...AGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGGGCTCCCCACTGGTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | GGCACCAGTGGGGAGCCCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTGGCCTCACGCTTCTGTaGGCTCAGAGCCTGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTSGEPNNYSLWPASRTAGLTLL*AQSLHG Trigger: GCCATGCAGGCTCTGAGCTCACAGAAGCGTGAGGCC...AGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGGGCTCCCCACTGGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCGGCCCGCGCTGCAAGTaGCTCGGGCCATCCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSAAFKLLTASPQPLICCGPRCK*LGPSAM Trigger: CATGGCGGATGGCCCGAGGCACTTGCAGCGCGGGCC...GCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCAGAGTGTGCCGTCGCTaGCCACTGCGTGTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HKATVLTSSLCQCLTGLARVCRR*PLRVAW Trigger: CCAGGCCACACGCAGTGGGCAGCGACGGCACACTCT...GGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTGGGGAGCCCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTTGAGAGAGTGTGCCGTCGCTaGCCACTGCGTGTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PVGSPTTTVSGQPQGLLERVCRR*PLRVAW Trigger: CCAGGCCACACGCAGTGGGCAGCGACGGCACACTCT...CTCAAGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGGGCTCCCCACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCTGGGCTGCGGGCCAGGATGGCTCTCCGGAGACTTCCCATGCCTAGTCTTACTTCTGACAGAGTGTaGCGTCGCTGCCCACTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: WAGLRARMALRRLPMPSLTSDRV*RRCPLR Trigger: ACGCAGTGGGCAGCGACGGCACACTCTGTCAGAAGT...AAGACTAGGCATGGGAAGTCTCCGGAGAGCCATCCTGGCCCGCAGCCCAGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGGAGCAGCTCCTGGCTaGTGTGGTGGAGGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KATVLTSSLCQCLTGLAAGAAPG*CGGGGG Trigger: ACCACCCCCTCCACCACAGCAGCCAGGAGCTGCTCC...AGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGGAGCAGCTCCTGGCTaGTGTGGTGGAGGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HKATVLTSSLCQCLTGLAGAAPG*CGGGGG Trigger: ACCACCCCCTCCACCACAGCAGCCAGGAGCTGCTCC...GGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCGAACCCCACCCGGACTaGCCCGCGCTGCAAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQLLSAAFKLLTASPQPLEPHPD*PALQVP Trigger: AGGCACTTGCAGCGCGGGCCAGTCCGGGTGGGGTTC...GAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCAAGGGAGGTGGAGCCTaGGGGCCGGGAGTAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTRWGQTQKQSDEWRAHCKGGGA*GPGVEG Trigger: GCCCTCTACTCCCGGCCCCCAGGCTCCACCTCCCTT...GCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCCCACCTCCGTCTTGGTaGTCCGGTGCCGCCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLLSAAFKLLTASPQPLIPPPSW*SGAAPA Trigger: AGCTGGGGCGGCACCGGATCACCAAGACGGAGGTGG...GATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | GGCACCAGTGGGGAGCCCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTTGCTGTGGTGAGAGCTaGGGGTGCATGCTGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GTSGEPNNYSLWPASRTACCGES*GCMLAD Trigger: GTCTGCCAGCATGCACCCTCAGCTCTCACCACAGCA...AGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGGGCTCCCCACTGGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | TCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTGACAGTCCGCCCCTGTaGGGTTGCTCTGCTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SDSLSAAPHLLPNCPAIADSPPL*GCSAGL Trigger: GAGCCCAGCAGAGCAACCTCACAGGGGCGGACTGTC...AGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTGTCTTGGTGATCCGGTaGCGCCCCAGCTTCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSLCQCLTGLAADERVLVIR*RPSFTT Trigger: CGTGGTGAAGCTGGGGCGGCACCGGATCACCAAGAC...ACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | TCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTGGAGCAGCTCCTGGCTaGTGTGGTGGAGGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDSLSAAPHLLPNCPAIAGAAPG*CGGGGG Trigger: ACCACCCCCTCCACCACAGCAGCCAGGAGCTGCTCC...AGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGGGCTGCGGGCCAGGATGGCTCTCCGGAGACTTCCCATGCCTAGTCTTTGGATGCAAGGTCACTaGCAGCCCCACAGTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WAGLRARMALRRLPMPSLWMQGH*QPHSLC Trigger: GCACAAACTGTGGGGCTGCCAGTGACCTTGCATCCA...AAGACTAGGCATGGGAAGTCTCCGGAGAGCCATCCTGGCCCGCAGCCCAGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | GGCACCAGTGGGGAGCCCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTCATACTGCTGGGCAGTaGCTGGCATCCCTTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTSGEPNNYSLWPASRTAHTAGQ*LASLPH Trigger: GTGAGGAAGGGATGCCAGTCACTGCCCAGCAGTATG...AGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGGGCTCCCCACTGGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGAGAGTGTGCCGTCGCTaGCCACTGCGTGTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHKATVLTSSLCQCLTGLRVCRR*PLRVAW Trigger: CCAGGCCACACGCAGTGGGCAGCGACGGCACACTCT...CAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCGTCAGTGGAGTCTCCTaGTGGGGAAGAGCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTSSLCQCLTGLAADERSVSGVS*WGRASC Trigger: GCAGCTGGCTCTTCCCCACCAGGAGACTCCACTGAC...GGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGGTTGGAGCAGCTCCTaGCTGCTGTGGTGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHKATVLTSSLCQCLTGLGWSSS*LLWWRG Trigger: CCCCCTCCACCACAGCAGCCAGGAGCTGCTCCAACC...CAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCTGGGCTGCGGGCCAGGATGGCTCTCCGGAGACTTCCCATGCCTAGTCTTTCAACAGTCTTCTGCTaGTCAATCCCAAGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WAGLRARMALRRLPMPSLSTVFC*SIPRLC Trigger: GCACAGCCTTGGGATTGATCAGCAGAAGACTGTTGA...AAGACTAGGCATGGGAAGTCTCCGGAGAGCCATCCTGGCCCGCAGCCCAGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTCATACTGCTGGGCAGTaGCTGGCATCCCTTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSLCQCLTGLAADERHTAGQ*LASLPH Trigger: GTGAGGAAGGGATGCCAGTCACTGCCCAGCAGTATG...ACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTCTGGGTCAGGCTGAATaGTGGGGGCTGCTGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLCQCLTGLAADERSQLLGQAE*WGLLGC Trigger: ACATCCCAGCAGCCCCCATCATTCAGCCTGACCCAG...AAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | GGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCCTGGGTCAGGCTGAATaGTGGGGGCTGCTGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GLHKATVLTSSLCQCLTGLGQAE*WGLLGC Trigger: ACATCCCAGCAGCCCCCATCATTCAGCCTGACCCAG...GCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTGGGGGTGGTGGCTGCTaGTGTTGCTGCAATTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSLCQCLTGLAADERGGGGC*CCCNCE Trigger: CTCACAATTGCAGCAACATCAGCAGCCACCACCCCC...ACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | CACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGGGGGTGGTGGCTGCTaGTGTTGCTGCAATTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HKATVLTSSLCQCLTGLAGGGGC*CCCNCE Trigger: CTCACAATTGCAGCAACATCAGCAGCCACCACCCCC...GGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGACAGTCCGCCCCTGTaGGGTTGCTCTGCTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AAFKLLTASPQPLICCLTDSPPL*GCSAGL Trigger: GAGCCCAGCAGAGCAACCTCACAGGGGCGGACTGTC...AGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTTCGACAGTCCGCCCCTGTaGGGTTGCTCTGCTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ERKEGGNGSLRQVPAGWFDSPPL*GCSAGL Trigger: GAGCCCAGCAGAGCAACCTCACAGGGGCGGACTGTC...GAACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | TCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTCGGCAAAGTTGCCCTTaGCCAGCGTGCCCTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SDSLSAAPHLLPNCPAIARQSCP*PACPRC Trigger: ACATCGAGGGCACGCTGGGCAAGGGCAACTTTGCCG...AGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTCACCACGGCAAAGTTaGCCTTGCCCAGCGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLHKATVLTSSLCQCLTGSPRQS*PCPACP Trigger: AGGGCACGCTGGGCAAGGGCAACTTTGCCGTGGTGA...GCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | GACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTGCTGCCTTCAGGTCTCTGTaGACTACCTTCCGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: DSLSAAPHLLPNCPAIAAAFRSL*TTFRPW Trigger: CCATGGCCGGAAGGTAGTGCACAGAGACCTGAAGGC...AGCAGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTGGCCTCCACATTGGATaGCTGTGGGAGGAGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSLCQCLTGLAADERGLHIG*LWEEGR Trigger: TCTACCCTCCTCCCACAGGCATCCAATGTGGAGGCC...ACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | ACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCCTGTGAGGTTGCTCTaGTGGGCTCCATCCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSSLCQCLTGLAADERSQPVRLL*WAPSTG Trigger: TCCTGTGGATGGAGCCCAGCAGAGCAACCTCACAGG...CTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGGTGCTAGGCCGACGCTaGCGGCCATCAAGTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ERSQLLSAAFKLLTASPQVLGRR*RPSSLC Trigger: GCAGAGACTTGATGGCCGCCAGCGTCGGCCTAGCAC...CTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCGTCAGTGGAGTCTCCTaGTGGGGAAGAGCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLHKATVLTSSLCQCLTGVSGVS*WGRASC Trigger: GCAGCTGGCTCTTCCCCACCAGGAGACTCCACTGAC...GCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGGGAGTAGAGGGCAGTaGCTGCAACTGCATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KATVLTSSLCQCLTGLAAGSRGQ*LQLHLW Trigger: CCAGAGATGCAGTTGCAGCCACTGCCCTCTACTCCC...AGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTAAGGGAGGTGGAGCCTaGGGGCCGGGAGTAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKGRKEEMGAYDRFRQDGKGGGA*GPGVEG Trigger: GCCCTCTACTCCCGGCCCCCAGGCTCCACCTCCCTT...ACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | GGTAGCCGTGGAACTAGGGATGTCTACTTGAAAGGAAGGAAGGAGGAAATGGGACCACCTCCGTCTTGGTaGTCCGGTGCCGCCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSRGTRDVYLKGRKEEMGPPPSW*SGAAPA Trigger: AGCTGGGGCGGCACCGGATCACCAAGACGGAGGTGG...TCCCATTTCCTCCTTCCTTCCTTTCAAGTAGACATCCCTAGTTCCACGGCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | GAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGTCACCACGGCAAAGTTaGCCTTGCCCAGCGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERSQLLSAAFKLLTASPQSPRQS*PCPACP Trigger: AGGGCACGCTGGGCAAGGGCAACTTTGCCGTGGTGA...CTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CCCAATTCCAAGCAGAGCGCATTTCCAAAGCAGCCTGGCACCAGTGGGGAGCCCAGGTCTCCATCATACTaGTGGGCAGTGACTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PNSKQSAFPKQPGTSGEPRSPSY*WAVTGI Trigger: GATGCCAGTCACTGCCCAGCAGTATGATGGAGACCT...GGGCTCCCCACTGGTGCCAGGCTGCTTTGGAAATGCGCTCTGCTTGGAATTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTGCCCAACGTGCAAAGCTCCATAAGCTCAGGACAGCACGGTGGGGAGCAGACGTATCTGATGCTCTaGGGCCTTCTCGGAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLPNVQSSISSGQHGGEQTYLML*GLLGSS Trigger: TGAGCTTCCGAGAAGGCCGCAGAGCATCAGATACGT...CTGCTCCCCACCGTGCTGTCCTGAGCTTATGGAGCTTTGCACGTTGGGCAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCTGGATGCAAGGTCACTaGCAGCCCCACAGTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HKATVLTSSLCQCLTGLAWMQGH*QPHSLC Trigger: GCACAAACTGTGGGGCTGCCAGTGACCTTGCATCCA...GGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTGCTTGGATGCAAGGTCACTaGCAGCCCCACAGTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSLSAAPHLLPNCPAIAAWMQGH*QPHSLC Trigger: GCACAAACTGTGGGGCTGCCAGTGACCTTGCATCCA...AGCAGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | GACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTGCTCAGTCTCACGTTCGGTaGATGCAAGGTCACTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSLSAAPHLLPNCPAIAAQSHVR*MQGHWQ Trigger: CTGCCAGTGACCTTGCATCCACCGAACGTGAGACTG...AGCAGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | AAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTAAAAGGCCTCCACATTaGATGCCTGTGGGAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KATVLTSSLCQCLTGLAAKRPPH*MPVGGG Trigger: CCCTCCTCCCACAGGCATCCAATGTGGAGGCCTTTT...AGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | ACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGAAAAGGCCTCCACATTaGATGCCTGTGGGAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSSLCQCLTGLAADERSQKRPPH*MPVGGG Trigger: CCCTCCTCCCACAGGCATCCAATGTGGAGGCCTTTT...CTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTGCTGGGCAGTGACTaGCATCCCTTCCTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSAAFKLLTASPQPLICCLLGSD*HPFLTR Trigger: CCTGGTGAGGAAGGGATGCCAGTCACTGCCCAGCAG...GCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | GCTAAGCAGCTCACAACCCTGTTGGGGGACAGGGGTTTATGCCAATCTGCTGTGCTGCTGGGCAGTGACTaGCATCCCTTCCTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AKQLTTLLGDRGLCQSAVLLGSD*HPFLTR Trigger: CCTGGTGAGGAAGGGATGCCAGTCACTGCCCAGCAG...CACAGCAGATTGGCATAAACCCCTGTCCCCCAACAGGGTTGTGAGCTGCTTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGTCAGTGGAGTCTCCTaGTGGGGAAGAGCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHKATVLTSSLCQCLTGLVSGVS*WGRASC Trigger: GCAGCTGGCTCTTCCCCACCAGGAGACTCCACTGAC...CAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | AGACAGGGTTCTGGGATCAGTACCAGCTGCTACTCAAGTGTCCTGGAAACACAAAAGGGAGGTGGAGCCTaGGGGCCGGGAGTAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQGSGISTSCYSSVLETQKGGGA*GPGVEG Trigger: GCCCTCTACTCCCGGCCCCCAGGCTCCACCTCCCTT...TTGTGTTTCCAGGACACTTGAGTAGCAGCTGGTACTGATCCCAGAACCCTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCCTCAGAGAGGGCCAGTaGGTCATAGCTAGATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HKATVLTSSLCQCLTGLALREGQ*VIARCG Trigger: ACCGCATCTAGCTATGACCCACTGGCCCTCTCTGAG...GGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR CAA 72 bp | GTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTaGGCCGCTGATGAGCGTTCCCAGCTTCTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSLCQCLTG*AADERSQLLSA Trigger: TGCAGAGAGAAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR CAA 72 bp | CAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTaGAGTCACCAACACTGGCAGGGGCTGAGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQLQSLASLKDC*SHQHWQGLSWA Trigger: AGCCCAGCTCAGCCCCTGCCAGTGTTGGTGACTCAAGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | GTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCATGCGGGGTGACGGCTaGTTGGCTAACATGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTRWGQTQKQSDEWRAHCMRGDG*LANMMS Trigger: GGACATCATGTTAGCCAATCAGCCGTCACCCCGCAT...GCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | TCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTTGTAAGGGACGTATCTaGTGCTCTGCGGCCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SSLCQCLTGLAADERSQLCKGRI*CSAAFS Trigger: CGAGAAGGCCGCAGAGCATCAGATACGTCCCTTACA...AAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | CTTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGCTGGGTCAGGCTGAATaGTGGGGGCTGCTGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LERKEGGNGSLRQVPAGWLGQAE*WGLLGC Trigger: ACATCCCAGCAGCCCCCATCATTCAGCCTGACCCAG...CCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | GAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTTCCTGGGTCAGGCTGAATaGTGGGGGCTGCTGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: ERKEGGNGSLRQVPAGWFLGQAE*WGLLGC Trigger: ACATCCCAGCAGCCCCCATCATTCAGCCTGACCCAG...GAACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | CTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGGGGGTGGTGGCTGCTaGTGTTGCTGCAATTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHKATVLTSSLCQCLTGLGGGGC*CCCNCE Trigger: CTCACAATTGCAGCAACATCAGCAGCCACCACCCCC...CAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | GGTAGCCGTGGAACTAGGGATGTCTACTTGAAAGGAAGGAAGGAGGAAATGGGAGACAGTCCGCCCCTGTaGGGTTGCTCTGCTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSRGTRDVYLKGRKEEMGDSPPL*GCSAGL Trigger: GAGCCCAGCAGAGCAACCTCACAGGGGCGGACTGTC...TCCCATTTCCTCCTTCCTTCCTTTCAAGTAGACATCCCTAGTTCCACGGCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | TCTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACCTAGATGCGGTGTCCTaGAGTCCTGAGCTCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRSSQGDCPHLLSVSVPNLDAVS*SPELLG Trigger: TCCCAGGAGCTCAGGACTTCAGGACACCGCATCTAG...GTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | CAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCCTAGATGCGGTGTCCTaGAGTCCTGAGCTCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QLLSAAFKLLTASPQPLILDAVS*SPELLG Trigger: TCCCAGGAGCTCAGGACTTCAGGACACCGCATCTAG...GATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | GAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTTCTCACCACGGCAAAGTTaGCCTTGCCCAGCGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERKEGGNGSLRQVPAGWFSPRQS*PCPACP Trigger: AGGGCACGCTGGGCAAGGGCAACTTTGCCGTGGTGA...GAACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | GCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTTCACCACGGCAAAGTTaGCCTTGCCCAGCGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAFKLLTASPQPLICCLTSPRQS*PCPACP Trigger: AGGGCACGCTGGGCAAGGGCAACTTTGCCGTGGTGA...AGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | TCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCTGCCTTCAGGTCTCTGTaGACTACCTTCCGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLGGGRHRSNQMSGGPIAAFRSL*TTFRPW Trigger: CCATGGCCGGAAGGTAGTGCACAGAGACCTGAAGGC...AGCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | CTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGCCTTCAGGTCTCTGTaGACTACCTTCCGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLHKATVLTSSLCQCLTAFRSL*TTFRPW Trigger: CCATGGCCGGAAGGTAGTGCACAGAGACCTGAAGGC...TGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | CCAGTGGGGAGCCCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTTGAGCGGCCATCAAGTCTCTaGTCCACAGGAAAACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVGSPTTTVSGQPQGLLERPSSL*STGKLL Trigger: GAGCAGTTTTCCTGTGGAGCAGAGACTTGATGGCCG...CTCAAGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGGGCTCCCCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | GAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGGGCCTCCACATTGGATaGCTGTGGGAGGAGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ERSQLLSAAFKLLTASPQGLHIG*LWEEGR Trigger: TCTACCCTCCTCCCACAGGCATCCAATGTGGAGGCC...CTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | TCTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACGGCCTCCACATTGGATaGCTGTGGGAGGAGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRSSQGDCPHLLSVSVPNGLHIG*LWEEGR Trigger: TCTACCCTCCTCCCACAGGCATCCAATGTGGAGGCC...GTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | GTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTGGAGAACATTTTCCCTaGCCCGGGCATCACAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSLCQCLTGLAADERGEHFP*PGHHNQ Trigger: TTGGTTGTGATGCCCGGGGCAGGGAAAATGTTCTCC...ACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | ACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGACGTATCTGATGCTCTaGGGCCTTCTCGGAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TSSLCQCLTGLAADERSQTYLML*GLLGSS Trigger: TGAGCTTCCGAGAAGGCCGCAGAGCATCAGATACGT...CTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | AAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGGCTTCTGGAGTCGATaGTGTAGGTACTGGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KATVLTSSLCQCLTGLAAGFWSR*CRYWVS Trigger: GGAAACCCAGTACCTACAGCATCGACTCCAGAAGCC...AGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | GGTAGCCGTGGAACTAGGGATGTCTACTTGAAAGGAAGGAAGGAGGAAATGGGAGGAGCAGCTCCTGGCTaGTGTGGTGGAGGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSRGTRDVYLKGRKEEMGGAAPG*CGGGGG Trigger: ACCACCCCCTCCACCACAGCAGCCAGGAGCTGCTCC...TCCCATTTCCTCCTTCCTTCCTTTCAAGTAGACATCCCTAGTTCCACGGCTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | GAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCTGTGAGGTTGCTCTaGTGGGCTCCATCCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERSQLLSAAFKLLTASPQPVRLL*WAPSTG Trigger: TCCTGTGGATGGAGCCCAGCAGAGCAACCTCACAGG...CTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | GGCACCAGTGGGGAGCCCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTGCAGCCATTCACCTTTaGAGTGTCGACACACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTSGEPNNYSLWPASRTAAAIHL*SVDTLF Trigger: GAAGAGTGTGTCGACACTCCAAAGGTGAATGGCTGC...AGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGGGCTCCCCACTGGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CTTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGCTGCTGGGCAGTGACTaGCATCCCTTCCTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LERKEGGNGSLRQVPAGWLLGSD*HPFLTR Trigger: CCTGGTGAGGAAGGGATGCCAGTCACTGCCCAGCAG...CCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | GTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCTCCATCATACTGCTaGGCAGTGACTGGCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSLCQCLTGLAADERSPSYC*AVTGIP Trigger: AGGGATGCCAGTCACTGCCCAGCAGTATGATGGAGA...ACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | GGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCCTTCAAAGGCCTGACTaGGGTCTTCCTCAGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLHKATVLTSSLCQCLTGLQRPD*GLPQPL Trigger: GAGAGGCTGAGGAAGACCCCAGTCAGGCCTTTGAAG...GCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | TCTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGCCAGCTGCTGACTTaGTCCAGGGTAGGAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRSSQGDCPHLLSVSVPNSQLLT*SRVGAL Trigger: GAGAGCTCCTACCCTGGACCAAGTCAGCAGCTGGCT...GTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCTGCTATCTACTCCTGCTGTAACCCACAGCCCAATTCCAAGCAGAGCGCTGCTGGGATGTCAGTaGAGTCTCCTGGTGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLLSTPAVTHSPIPSRALLGCQ*SLLVGK Trigger: CTTCCCCACCAGGAGACTCCACTGACATCCCAGCAG...CGCTCTGCTTGGAATTGGGCTGTGGGTTACAGCAGGAGTAGATAGCAGGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCGGGAGTAGAGGGCAGTaGCTGCAACTGCATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSAAFKLLTASPQPLICCGSRGQ*LQLHLW Trigger: CCAGAGATGCAGTTGCAGCCACTGCCCTCTACTCCC...GCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCCTCAGAGAGGGCCAGTaGGTCATAGCTAGATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQLLSAAFKLLTASPQPLLREGQ*VIARCG Trigger: ACCGCATCTAGCTATGACCCACTGGCCCTCTCTGAG...GAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | CTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAACATACTGCTGGGCAGTaGCTGGCATCCCTTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTGLAADERSQLLSAAFKHTAGQ*LASLPH Trigger: GTGAGGAAGGGATGCCAGTCACTGCCCAGCAGTATG...TTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | CAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCAAAGCTTCAAAGGCCTaGCTGGGGTCTTCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLLSAAFKLLTASPQPLIKASKA*LGSSSA Trigger: GGCTGAGGAAGACCCCAGTCAGGCCTTTGAAGCTTT...GATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | TCTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAAAGCTTCAAAGGCCTaGCTGGGGTCTTCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRSSQGDCPHLLSVSVPNKASKA*LGSSSA Trigger: GGCTGAGGAAGACCCCAGTCAGGCCTTTGAAGCTTT...GTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | CTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAATGCGGGGTGACGGCTaGTTGGCTAACATGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLHKATVLTSSLCQCLTMRGDG*LANMMS Trigger: GGACATCATGTTAGCCAATCAGCCGTCACCCCGCAT...TGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | TCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCTATGCGGGGTGACGGCTaGTTGGCTAACATGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLGGGRHRSNQMSGGPIAMRGDG*LANMMS Trigger: GGACATCATGTTAGCCAATCAGCCGTCACCCCGCAT...AGCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | TCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCTTGTAAGGGACGTATCTaGTGCTCTGCGGCCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLGGGRHRSNQMSGGPIACKGRI*CSAAFS Trigger: CGAGAAGGCCGCAGAGCATCAGATACGTCCCTTACA...AGCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | CTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGTGTAAGGGACGTATCTaGTGCTCTGCGGCCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LHKATVLTSSLCQCLTGLCKGRI*CSAAFS Trigger: CGAGAAGGCCGCAGAGCATCAGATACGTCCCTTACA...CAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | TTCAGATCCCACATGGTGGAAACAGATTCAAGAACCTTTGGGTTTAGCAGGACAGGCCCGCGCTGCAAGTaGCTCGGGCCATCCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: FRSHMVETDSRTFGFSRTGPRCK*LGPSAM Trigger: CATGGCGGATGGCCCGAGGCACTTGCAGCGCGGGCC...TGTCCTGCTAAACCCAAAGGTTCTTGAATCTGTTTCCACCATGTGGGATCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | TTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTCGGCAAAGTTGCCCTTaGCCAGCGTGCCCTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LKGRKEEMGAYDRFRQDGRQSCP*PACPRC Trigger: ACATCGAGGGCACGCTGGGCAAGGGCAACTTTGCCG...ACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | TGCCTGCCCAACGTGCAAAGCTCCATAAGCTCAGGACAGCACGGTGGGGAGCAGCATAAAGGCAGCTTCTaGTTGACAGCTGGATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLPNVQSSISSGQHGGEQHKGSF*LTAGCW Trigger: CCAACATCCAGCTGTCAAGCAGAAGCTGCCTTTATG...CTGCTCCCCACCGTGCTGTCCTGAGCTTATGGAGCTTTGCACGTTGGGCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | GCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTACTTCTGACAGAGTGTaGCGTCGCTGCCCACTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AAFKLLTASPQPLICCLTTSDRV*RRCPLR Trigger: ACGCAGTGGGCAGCGACGGCACACTCTGTCAGAAGT...AGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | GTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCACGTATCTGATGCTCTaGGGCCTTCTCGGAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTRWGQTQKQSDEWRAHCTYLML*GLLGSS Trigger: TGAGCTTCCGAGAAGGCCGCAGAGCATCAGATACGT...GCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | GTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCGTAGAGGGCAGTGGCTaGAACTGCATCTCTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VTRWGQTQKQSDEWRAHCVEGSG*NCISGY Trigger: ATACCCAGAGATGCAGTTGCAGCCACTGCCCTCTAC...GCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | TCTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACTGGATGCAAGGTCACTaGCAGCCCCACAGTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRSSQGDCPHLLSVSVPNWMQGH*QPHSLC Trigger: GCACAAACTGTGGGGCTGCCAGTGACCTTGCATCCA...GTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | TCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTTCTCCATCATACTGCTaGGCAGTGACTGGCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLCQCLTGLAADERSQLSPSYC*AVTGIP Trigger: AGGGATGCCAGTCACTGCCCAGCAGTATGATGGAGA...AAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGCTTCAAAGGCCTGACTaGGGTCTTCCTCAGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHKATVLTSSLCQCLTGLLQRPD*GLPQPL Trigger: GAGAGGCTGAGGAAGACCCCAGTCAGGCCTTTGAAG...CAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CCAGTGGGGAGCCCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTTGAGAAGTTCAGGTCCCTCTaGGCAGACCCCATATCATAC | + |
|
Preference number: 4 (lower is better) Translates to: PVGSPTTTVSGQPQGLLEKFRSL*ADPISY Trigger: GTATGATATGGGGTCTGCCCAGAGGGACCTGAACTT...CTCAAGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGGGCTCCCCACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | TCTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACTGCTGGCAGACAGGCTaGAGACACTTTCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRSSQGDCPHLLSVSVPNCWQTG*RHFPAA Trigger: AGCAGCAGGAAAGTGTCTCCAGCCTGTCTGCCAGCA...GTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | ACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGAAGAGTCGCTTCTGTTaGAGCCTATGCTCCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSSLCQCLTGLAADERSQKSRFC*SLCSCS Trigger: GCTACAGGAGCATAGGCTCCAACAGAAGCGACTCTT...CTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | GCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGGGAGTAGAGGGCAGTaGCTGCAACTGCATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAFKLLTASPQPLICCLTGSRGQ*LQLHLW Trigger: CCAGAGATGCAGTTGCAGCCACTGCCCTCTACTCCC...AGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CTATACAGTAGTGTACACACTGCTGATGTGAACCGACAGGCAGACACGTCAGTAGGTTGGAGCAGCTCCTaGCTGCTGTGGTGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYSSVHTADVNRQADTSVGWSSS*LLWWRG Trigger: CCCCCTCCACCACAGCAGCCAGGAGCTGCTCCAACC...TACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR CAA 72 bp | ATGGCTCTCCGGAGACTTCCCATGCCTAGTCTTCCCTaGCCTGCCTGGACACTTACTACAGAGAGGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MALRRLPMPSLP*PAWTLTTERKG Trigger: GCCTTTCCTCTCTGTAGTAAGTGTCCAGGCAGGCAAGGGAAGACTAGGCATGGGAAGTCTCCGGAGAGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | TCTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACTTGGTTAGTCACTTCTaGCAGAGTGTGCCGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRSSQGDCPHLLSVSVPNLVSHF*QSVPSL Trigger: CAGCGACGGCACACTCTGTCAGAAGTGACTAACCAA...GTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | CTATACAGTAGTGTACACACTGCTGATGTGAACCGACAGGCAGACACGTCAGTAGGCCTCACGCTTCTGTaGGCTCAGAGCCTGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LYSSVHTADVNRQADTSVGLTLL*AQSLHG Trigger: GCCATGCAGGCTCTGAGCTCACAGAAGCGTGAGGCC...TACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | AAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTAAATATGCTTGCAGCTaGGACTGCTTCTGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KATVLTSSLCQCLTGLAAKYACS*DCFWRK Trigger: CTTCCTCCAGAAGCAGTCTCAGCTGCAAGCATATTT...AGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | GACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTGCTAAATATGCTTGCAGCTaGGACTGCTTCTGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DSLSAAPHLLPNCPAIAAKYACS*DCFWRK Trigger: CTTCCTCCAGAAGCAGTCTCAGCTGCAAGCATATTT...AGCAGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | TTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTCTAGATGCGGTGTCCTaGAGTCCTGAGCTCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKGRKEEMGAYDRFRQDGLDAVS*SPELLG Trigger: TCCCAGGAGCTCAGGACTTCAGGACACCGCATCTAG...ACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | AGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTTCCGGCCCGCGCTGCAAGTaGCTCGGGCCATCCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSVTLVLVRRKGLEASGPRCK*LGPSAM Trigger: CATGGCGGATGGCCCGAGGCACTTGCAGCGCGGGCC...GGAAGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | CTATACAGTAGTGTACACACTGCTGATGTGAACCGACAGGCAGACACGTCAGTAGTCTTGGTGATCCGGTaGCGCCCCAGCTTCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: LYSSVHTADVNRQADTSVVLVIR*RPSFTT Trigger: CGTGGTGAAGCTGGGGCGGCACCGGATCACCAAGAC...TACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | GTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCGCTGCCACACCATGTTaGCAGCAGTTCACCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTRWGQTQKQSDEWRAHCAATPC*QQFTSF Trigger: AAAACTGGTGAACTGCTGGCAACATGGTGTGGCAGC...GCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | CTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGCGGCCATCAAGTCTCTaGTCCACAGGAAAACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHKATVLTSSLCQCLTGLRPSSL*STGKLL Trigger: GAGCAGTTTTCCTGTGGAGCAGAGACTTGATGGCCG...CAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | CTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCGGCCATCAAGTCTCTaGTCCACAGGAAAACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSAAFKLLTASPQPLICCRPSSL*STGKLL Trigger: GAGCAGTTTTCCTGTGGAGCAGAGACTTGATGGCCG...GCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | AAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTCATAAAGGCAGCTTCTaGTTGACAGCTGGATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KATVLTSSLCQCLTGLAAHKGSF*LTAGCW Trigger: CCAACATCCAGCTGTCAAGCAGAAGCTGCCTTTATG...AGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | TCCCTCCTGCTATCTACTCCTGCTGTAACCCACAGCCCAATTCCAAGCAGAGCGAGGTCTCCATCATACTaGTGGGCAGTGACTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SLLLSTPAVTHSPIPSRARSPSY*WAVTGI Trigger: GATGCCAGTCACTGCCCAGCAGTATGATGGAGACCT...CGCTCTGCTTGGAATTGGGCTGTGGGTTACAGCAGGAGTAGATAGCAGGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | GAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGGGAGAACATTTTCCCTaGCCCGGGCATCACAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: ERSQLLSAAFKLLTASPQGEHFP*PGHHNQ Trigger: TTGGTTGTGATGCCCGGGGCAGGGAAAATGTTCTCC...CTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGTAGAGGGCAGTGGCTaGAACTGCATCTCTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LHKATVLTSSLCQCLTGLVEGSG*NCISGY Trigger: ATACCCAGAGATGCAGTTGCAGCCACTGCCCTCTAC...CAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | TCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCTGTAGAGGGCAGTGGCTaGAACTGCATCTCTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SLGGGRHRSNQMSGGPIAVEGSG*NCISGY Trigger: ATACCCAGAGATGCAGTTGCAGCCACTGCCCTCTAC...AGCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTGTACAGAAGAAGTGGTaGTTGGCAGCTCACAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSLCQCLTGLAADERVQKKW*LAAHKS Trigger: AGACTTGTGAGCTGCCAAGCACCACTTCTTCTGTAC...ACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCACATTGGATGCCTGTaGGAGGAGGGTAGATCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ERSQLLSAAFKLLTASPQHIGCL*EEGRSH Trigger: ATGCGATCTACCCTCCTCCCACAGGCATCCAATGTG...CTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGCACATTGGATGCCTGTaGGAGGAGGGTAGATCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHKATVLTSSLCQCLTGLHIGCL*EEGRSH Trigger: ATGCGATCTACCCTCCTCCCACAGGCATCCAATGTG...CAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAAAAAAGGCCTCCACATTaGATGCCTGTGGGAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTGLAADERSQLLSAAFKKRPPH*MPVGGG Trigger: CCCTCCTCCCACAGGCATCCAATGTGGAGGCCTTTT...TTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAG 54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CCACAGCCCAATTCCAAGCAGAGCGCATTTCCAAAGCAGCCTGGCACCAGTGGGCCAAGCCTTCATCAATaGAGGTCTCCATCATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQPNSKQSAFPKQPGTSGPSLHQ*RSPSYC Trigger: GCAGTATGATGGAGACCTCCATTGATGAAGGCTTGG...CCCACTGGTGCCAGGCTGCTTTGGAAATGCGCTCTGCTTGGAATTGGGCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | GAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTTCTGCTGGCAGACAGGCTaGAGACACTTTCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ERKEGGNGSLRQVPAGWFCWQTG*RHFPAA Trigger: AGCAGCAGGAAAGTGTCTCCAGCCTGTCTGCCAGCA...GAACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | GCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTTGCTGGCAGACAGGCTaGAGACACTTTCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAFKLLTASPQPLICCLTCWQTG*RHFPAA Trigger: AGCAGCAGGAAAGTGTCTCCAGCCTGTCTGCCAGCA...AGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | TTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTAGCCAGCTGCTGACTTaGTCCAGGGTAGGAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKGRKEEMGAYDRFRQDGSQLLT*SRVGAL Trigger: GAGAGCTCCTACCCTGGACCAAGTCAGCAGCTGGCT...ACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | AAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTCTGCAACTGCATCTCTaGGTATTGGCTGAGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KATVLTSSLCQCLTGLAALQLHL*VLAEER Trigger: TCTTTCCTCAGCCAATACCCAGAGATGCAGTTGCAG...AGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCCTGCAACTGCATCTCTaGGTATTGGCTGAGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HKATVLTSSLCQCLTGLALQLHL*VLAEER Trigger: TCTTTCCTCAGCCAATACCCAGAGATGCAGTTGCAG...GGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | ACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTGCAACTGCATCTCTaGGTATTGGCTGAGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSSLCQCLTGLAADERSQLQLHL*VLAEER Trigger: TCTTTCCTCAGCCAATACCCAGAGATGCAGTTGCAG...CTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCTTGGTACAGAAGAAGTaGTGCTTGGCAGCTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTSSLCQCLTGLAADERSLVQKK*CLAAHK Trigger: CTTGTGAGCTGCCAAGCACCACTTCTTCTGTACCAA...GGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | GACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTGCTTTGTGCTCCTTGATTTaGGCTATGCTTAGCCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DSLSAAPHLLPNCPAIAALCSLI*AMLSRL Trigger: CAAACGGCTAAGCATAGCTCAAATCAAGGAGCACAA...AGCAGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | GGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTCCACTTGTGCTCCTTaGTTTGAGCTATGCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLHKATVLTSSLCQCLTGSTCAP*FELCLA Trigger: GGCTAAGCATAGCTCAAATCAAGGAGCACAAGTGGA...GCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | CTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACATCAACAGTCTTCTGCTaGTCAATCCCAAGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLHKATVLTSSLCQCLTSTVFC*SIPRLC Trigger: GCACAGCCTTGGGATTGATCAGCAGAAGACTGTTGA...TGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | TCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCAAGGCAGCTTCTGCTTaGCAGCTGGATGTTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQLLSAAFKLLTASPQPLKAASA*QLDVGN Trigger: ATTTCCAACATCCAGCTGTCAAGCAGAAGCTGCCTT...GAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | TTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTAAAGCTTCAAAGGCCTaGCTGGGGTCTTCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKGRKEEMGAYDRFRQDGKASKA*LGSSSA Trigger: GGCTGAGGAAGACCCCAGTCAGGCCTTTGAAGCTTT...ACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | GAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTTCTTGGTTAGTCACTTCTaGCAGAGTGTGCCGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERKEGGNGSLRQVPAGWFLVSHF*QSVPSL Trigger: CAGCGACGGCACACTCTGTCAGAAGTGACTAACCAA...GAACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | ACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGGGTAGGGTCTGCGTTTaGTCCCATTTGTTCATACAG | + |
|
Preference number: 4 (lower is better) Translates to: TVLTSSLCQCLTGLAADEGRVCV*SHLFIQ Trigger: CTGTATGAACAAATGGGATCAAACGCAGACCCTACC...CTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | GCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGGGCCCGCGCTGCAAGTaGCTCGGGCCATCCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: ALFAEWKFYLMFGSPVSLGPRCK*LGPSAM Trigger: CATGGCGGATGGCCCGAGGCACTTGCAGCGCGGGCC...CAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | CTATACAGTAGTGTACACACTGCTGATGTGAACCGACAGGCAGACACGTCAGTACGGCAAAGTTGCCCTTaGCCAGCGTGCCCTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LYSSVHTADVNRQADTSVRQSCP*PACPRC Trigger: ACATCGAGGGCACGCTGGGCAAGGGCAACTTTGCCG...TACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | GAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCAGCCCCACAGTTTGTaGCTTGGCAACTGTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERSQLLSAAFKLLTASPQQPHSL*LGNCLF Trigger: GAACAAACAGTTGCCAAGGCACAAACTGTGGGGCTG...CTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | CAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCCAGCCCCACAGTTTGTaGCTTGGCAACTGTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLLSAAFKLLTASPQPLIQPHSL*LGNCLF Trigger: GAACAAACAGTTGCCAAGGCACAAACTGTGGGGCTG...GATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | GTAACCCACAGCCCAATTCCAAGCAGAGCGCATTTCCAAAGCAGCCTGGCACCACAGCCCCACAGTTTGTaGCTTGGCAACTGTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTHSPIPSRAHFQSSLAPQPHSL*LGNCLF Trigger: GAACAAACAGTTGCCAAGGCACAAACTGTGGGGCTG...TGGTGCCAGGCTGCTTTGGAAATGCGCTCTGCTTGGAATTGGGCTGTGGGTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | CTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAAGGAGAACATTTTCCCTaGCCCGGGCATCACAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTGLAADERSQLLSAAFKGEHFP*PGHHNQ Trigger: TTGGTTGTGATGCCCGGGGCAGGGAAAATGTTCTCC...TTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | TTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTCTGAATGATGGGGGCTaGTGGGATGTCAGTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKGRKEEMGAYDRFRQDGLNDGG*WDVSGV Trigger: GACTCCACTGACATCCCAGCAGCCCCCATCATTCAG...ACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | CTTGGAAGCTTCCATGAGTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGCTGAATGATGGGGGCTaGTGGGATGTCAGTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGSFHESLGGGRHRSNQMLNDGG*WDVSGV Trigger: GACTCCACTGACATCCCAGCAGCCCCCATCATTCAG...CATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGACTCATGGAAGCTTCCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | AGACAGGGTTCTGGGATCAGTACCAGCTGCTACTCAAGTGTCCTGGAAACACAACCTGTGAGGTTGCTCTaGTGGGCTCCATCCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQGSGISTSCYSSVLETQPVRLL*WAPSTG Trigger: TCCTGTGGATGGAGCCCAGCAGAGCAACCTCACAGG...TTGTGTTTCCAGGACACTTGAGTAGCAGCTGGTACTGATCCCAGAACCCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | TTTGGATCACCAGTCTCTTTGGAGAGGCTAGTTTACAGTAACAAAGCTAAGGGTGAACCCCACCCGGACTaGCCCGCGCTGCAAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FGSPVSLERLVYSNKAKGEPHPD*PALQVP Trigger: AGGCACTTGCAGCGCGGGCCAGTCCGGGTGGGGTTC...ACCCTTAGCTTTGTTACTGTAAACTAGCCTCTCCAAAGAGACTGGTGATCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | ACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTATGCTTAGCCGTTTaGAAGGATCTAGGACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TSSLCQCLTGLAADERSQLCLAV*KDLGPT Trigger: TGTTGGTCCTAGATCCTTCCAAACGGCTAAGCATAG...CTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGTTTTCCTGTTCTTGTaGGTAGAGAATAGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKATVLTSSLCQCLTGLAVFLFL*VENRPL Trigger: CAGAGGCCTATTCTCTACCCACAAGAACAGGAAAAC...GGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | GAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTTCCACATTGGATGCCTGTaGGAGGAGGGTAGATCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ERKEGGNGSLRQVPAGWFHIGCL*EEGRSH Trigger: ATGCGATCTACCCTCCTCCCACAGGCATCCAATGTG...GAACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGCAGCCATTCACCTTTaGAGTGTCGACACACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLHKATVLTSSLCQCLTAAIHL*SVDTLF Trigger: GAAGAGTGTGTCGACACTCCAAAGGTGAATGGCTGC...TGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAATCTCCATCATACTGCTaGGCAGTGACTGGCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTGLAADERSQLLSAAFKSPSYC*AVTGIP Trigger: AGGGATGCCAGTCACTGCCCAGCAGTATGATGGAGA...TTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | TTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTCTTCAAAGGCCTGACTaGGGTCTTCCTCAGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKGRKEEMGAYDRFRQDGLQRPD*GLPQPL Trigger: GAGAGGCTGAGGAAGACCCCAGTCAGGCCTTTGAAG...ACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CTTGGAAGCTTCCATGAGTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGTGCTGGCAGACAGGCTaGAGACACTTTCCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGSFHESLGGGRHRSNQMCWQTG*RHFPAA Trigger: AGCAGCAGGAAAGTGTCTCCAGCCTGTCTGCCAGCA...CATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGACTCATGGAAGCTTCCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | TCCCTCCTGCTATCTACTCCTGCTGTAACCCACAGCCCAATTCCAAGCAGAGCGAAGAGTCGCTTCTGTTaGAGCCTATGCTCCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLLSTPAVTHSPIPSRAKSRFC*SLCSCS Trigger: GCTACAGGAGCATAGGCTCCAACAGAAGCGACTCTT...CGCTCTGCTTGGAATTGGGCTGTGGGTTACAGCAGGAGTAGATAGCAGGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | ACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCTGCAACTGCATCTCTaGGTATTGGCTGAGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVLTSSLCQCLTGLAADELQLHL*VLAEER Trigger: TCTTTCCTCAGCCAATACCCAGAGATGCAGTTGCAG...CTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTAGAAGAAGTGGTGCTTaGCAGCTCACAAGTCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: KATVLTSSLCQCLTGLAARRSGA*QLTSLI Trigger: TATCAGACTTGTGAGCTGCCAAGCACCACTTCTTCT...AGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCACTCCATTGTGTTGTaGATCCACAGCTTCTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTSSLCQCLTGLAADERSHSIVL*IHSFYH Trigger: ATGGTAGAAGCTGTGGATCCACAACACAATGGAGTG...GGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 |
||
| CDS-3UTR TCA 90 bp | CTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTCCACCTCCGTCTTGGTaGTCCGGTGCCGCCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSVTLVLVRRKGLEAPPPSW*SGAAPA Trigger: AGCTGGGGCGGCACCGGATCACCAAGACGGAGGTGG...AGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | CCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTTGAGTCACCAACACTGTCAACAGTCTTCTGCTaGTCAATCCCAAGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTTTVSGQPQGLLESPTLSTVFC*SIPRLC Trigger: GCACAGCCTTGGGATTGATCAGCAGAAGACTGTTGA...CAGTGTTGGTGACTCAAGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | GGTAGCCGTGGAACTAGGGATGTCTACTTGAAAGGAAGGAAGGAGGAAATGGGAATGCGGGGTGACGGCTaGTTGGCTAACATGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSRGTRDVYLKGRKEEMGMRGDG*LANMMS Trigger: GGACATCATGTTAGCCAATCAGCCGTCACCCCGCAT...TCCCATTTCCTCCTTCCTTCCTTTCAAGTAGACATCCCTAGTTCCACGGCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAGGCCTCACGCTTCTGTaGGCTCAGAGCCTGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPRESLSLLSVTLVLVRRGLTLL*AQSLHG Trigger: GCCATGCAGGCTCTGAGCTCACAGAAGCGTGAGGCC...TCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | CTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGTAGGGTCTGCGTTTaGTCCCATTTGTTCATACAG | + |
|
Preference number: 4 (lower is better) Translates to: LGLHKATVLTSSLCQCLTGRVCV*SHLFIQ Trigger: CTGTATGAACAAATGGGATCAAACGCAGACCCTACC...TGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | TCTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACGAAAGGTCTTGGAGCTaGGGAGCAGTTGATGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRSSQGDCPHLLSVSVPNERSWS*GAVDVK Trigger: CTTAACATCAACTGCTCCTCAGCTCCAAGACCTTTC...GTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | TCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCTGAAAGGTCTTGGAGCTaGGGAGCAGTTGATGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLGGGRHRSNQMSGGPIAERSWS*GAVDVK Trigger: CTTAACATCAACTGCTCCTCAGCTCCAAGACCTTTC...AGCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | TCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCTAAATATGCTTGCAGCTaGGACTGCTTCTGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLGGGRHRSNQMSGGPIAKYACS*DCFWRK Trigger: CTTCCTCCAGAAGCAGTCTCAGCTGCAAGCATATTT...AGCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | CTATACAGTAGTGTACACACTGCTGATGTGAACCGACAGGCAGACACGTCAGTACTAGATGCGGTGTCCTaGAGTCCTGAGCTCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LYSSVHTADVNRQADTSVLDAVS*SPELLG Trigger: TCCCAGGAGCTCAGGACTTCAGGACACCGCATCTAG...TACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAAGCTGCCACACCATGTTaGCAGCAGTTCACCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTGLAADERSQLLSAAFKAATPC*QQFTSF Trigger: AAAACTGGTGAACTGCTGGCAACATGGTGTGGCAGC...TTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | GACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTGCTGCTCCACAGGAAAACTaGTCCTATGTGATTTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DSLSAAPHLLPNCPAIAAAPQEN*SYVILD Trigger: GTCTAAAATCACATAGGAGCAGTTTTCCTGTGGAGC...AGCAGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | TCTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACCATAAAGGCAGCTTCTaGTTGACAGCTGGATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRSSQGDCPHLLSVSVPNHKGSF*LTAGCW Trigger: CCAACATCCAGCTGTCAAGCAGAAGCTGCCTTTATG...GTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGAAGCTTCCATGAGTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGGGCTTCTGGAGTCGATaGTGTAGGTACTGGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGSFHESLGGGRHRSNQMGFWSR*CRYWVS Trigger: GGAAACCCAGTACCTACAGCATCGACTCCAGAAGCC...CATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGACTCATGGAAGCTTCCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCCTATGCTTAGCCGTTTaGAAGGATCTAGGACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VTRWGQTQKQSDEWRAHCLCLAV*KDLGPT Trigger: TGTTGGTCCTAGATCCTTCCAAACGGCTAAGCATAG...GCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCTGCTATCTACTCCTGCTGTAACCCACAGCCCAATTCCAAGCAGAGCGAGGGGTTATCACTCATaGAGAACATTTTCCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLLSTPAVTHSPIPSRARGYHS*RTFSLP Trigger: GGGCAGGGAAAATGTTCTCCATGAGTGATAACCCCT...CGCTCTGCTTGGAATTGGGCTGTGGGTTACAGCAGGAGTAGATAGCAGGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTTGAGTCACCAACACTGAAGTTCAGGTCCCTCTaGGCAGACCCCATATCATAC | + |
|
Preference number: 4 (lower is better) Translates to: PTTTVSGQPQGLLESPTLKFRSL*ADPISY Trigger: GTATGATATGGGGTCTGCCCAGAGGGACCTGAACTT...CAGTGTTGGTGACTCAAGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGCGATGCTGTAGGTACTaGGTTTCCAAGCTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHKATVLTSSLCQCLTGLRCCRY*VSKLCC Trigger: ACAGCAAAGCTTGGAAACCCAGTACCTACAGCATCG...CAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCCTCTTTACAATACACTaGACAAGGACTCTGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTRWGQTQKQSDEWRAHCLFTIH*TRTLGL Trigger: AAGGCCCAGAGTCCTTGTCCAGTGTATTGTAAAGAG...GCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCAGAAGAAGTGGTGCTTaGCAGCTCACAAGTCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: GLHKATVLTSSLCQCLTGRRSGA*QLTSLI Trigger: TATCAGACTTGTGAGCTGCCAAGCACCACTTCTTCT...GCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCACTCCATTGTGTTGTaGATCCACAGCTTCTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVLTSSLCQCLTGLAADEHSIVL*IHSFYH Trigger: ATGGTAGAAGCTGTGGATCCACAACACAATGGAGTG...CTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 |
||
| CDS-3UTR TCA 90 bp | TCTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACTTGTGCTCCTTGATTTaGGCTATGCTTAGCCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRSSQGDCPHLLSVSVPNLCSLI*AMLSRL Trigger: CAAACGGCTAAGCATAGCTCAAATCAAGGAGCACAA...GTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | CTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAATCCACTTGTGCTCCTTaGTTTGAGCTATGCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTGLAADERSQLLSAAFKSTCAP*FELCLA Trigger: GGCTAAGCATAGCTCAAATCAAGGAGCACAAGTGGA...TTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | GGCACCAGTGGGGAGCCCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTGTTCTAGCAAGATTCTaGAGATGTTGTCTAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTSGEPNNYSLWPASRTAVLARF*RCCLNA Trigger: AGCATTTAGACAACATCTTCAGAATCTTGCTAGAAC...AGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGGGCTCCCCACTGGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | CTTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGGGTAGGGTCTGCGTTTaGTCCCATTTGTTCATACAG | + |
|
Preference number: 4 (lower is better) Translates to: LERKEGGNGSLRQVPAGWGRVCV*SHLFIQ Trigger: CTGTATGAACAAATGGGATCAAACGCAGACCCTACC...CCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | CTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAAGGTAGGGTCTGCGTTTaGTCCCATTTGTTCATACAG | + |
|
Preference number: 4 (lower is better) Translates to: LTGLAADERSQLLSAAFKGRVCV*SHLFIQ Trigger: CTGTATGAACAAATGGGATCAAACGCAGACCCTACC...TTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTTCAAATATGCTTGCAGCTaGGACTGCTTCTGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ERKEGGNGSLRQVPAGWFKYACS*DCFWRK Trigger: CTTCCTCCAGAAGCAGTCTCAGCTGCAAGCATATTT...GAACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGTCTTGGTGATCCGGTaGCGCCCCAGCTTCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: PRESLSLLSVTLVLVRRKVLVIR*RPSFTT Trigger: CGTGGTGAAGCTGGGGCGGCACCGGATCACCAAGAC...TTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCGCTCCACAGGAAAACTaGTCCTATGTGATTTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLHKATVLTSSLCQCLTGAPQEN*SYVILD Trigger: GTCTAAAATCACATAGGAGCAGTTTTCCTGTGGAGC...GCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCGCTCCACAGGAAAACTaGTCCTATGTGATTTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SQLLSAAFKLLTASPQPLAPQEN*SYVILD Trigger: GTCTAAAATCACATAGGAGCAGTTTTCCTGTGGAGC...GAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTTGAGTCACCAACACTGGTACAGAAGAAGTGGTaGTTGGCAGCTCACAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTTTVSGQPQGLLESPTLVQKKW*LAAHKS Trigger: AGACTTGTGAGCTGCCAAGCACCACTTCTTCTGTAC...CAGTGTTGGTGACTCAAGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TCTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACGTTTTCCTGTTCTTGTaGGTAGAGAATAGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRSSQGDCPHLLSVSVPNVFLFL*VENRPL Trigger: CAGAGGCCTATTCTCTACCCACAAGAACAGGAAAAC...GTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGTTTTCCTGTTCTTGTaGGTAGAGAATAGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLHKATVLTSSLCQCLTVFLFL*VENRPL Trigger: CAGAGGCCTATTCTCTACCCACAAGAACAGGAAAAC...TGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTTCCGTGCTAGGCCGACGCTaGCGGCCATCAAGTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLSVTLVLVRRKGLEASVLGRR*RPSSLC Trigger: GCAGAGACTTGATGGCCGCCAGCGTCGGCCTAGCAC...GGAAGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGTGCTAGGCCGACGCTaGCGGCCATCAAGTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESLSLLSVTLVLVRRKGLVLGRR*RPSSLC Trigger: GCAGAGACTTGATGGCCGCCAGCGTCGGCCTAGCAC...CAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGATCACCAGTCTCTTTGGAGAGGCTAGTTTACAGTAACAAAGCTAAGGGTGTGCTAGGCCGACGCTaGCGGCCATCAAGTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FGSPVSLERLVYSNKAKGVLGRR*RPSSLC Trigger: GCAGAGACTTGATGGCCGCCAGCGTCGGCCTAGCAC...ACCCTTAGCTTTGTTACTGTAAACTAGCCTCTCCAAAGAGACTGGTGATCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCCACAGTTTGTGCCTTaGCAACTGTTTGTTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSAAFKLLTASPQPLICCPQFVP*QLFVQQ Trigger: TTGCTGAACAAACAGTTGCCAAGGCACAAACTGTGG...GCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACACCACAGTTTGTGCCTTaGCAACTGTTTGTTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGLHKATVLTSSLCQCLTPQFVP*QLFVQQ Trigger: TTGCTGAACAAACAGTTGCCAAGGCACAAACTGTGG...TGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCTGCTATCTACTCCTGCTGTAACCCACAGCCCAATTCCAAGCAGAGCGCCACAGTTTGTGCCTTaGCAACTGTTTGTTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLSTPAVTHSPIPSRAPQFVP*QLFVQQ Trigger: TTGCTGAACAAACAGTTGCCAAGGCACAAACTGTGG...CGCTCTGCTTGGAATTGGGCTGTGGGTTACAGCAGGAGTAGATAGCAGGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TCTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACCTCTTTACAATACACTaGACAAGGACTCTGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRSSQGDCPHLLSVSVPNLFTIH*TRTLGL Trigger: AAGGCCCAGAGTCCTTGTCCAGTGTATTGTAAAGAG...GTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCTCTTTACAATACACTaGACAAGGACTCTGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ERSQLLSAAFKLLTASPQLFTIH*TRTLGL Trigger: AAGGCCCAGAGTCCTTGTCCAGTGTATTGTAAAGAG...CTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAACTACATTCTAGCCCTTGGCACAGAAAATTCTGTGGTAGGACAGAGCCAAGCCAGCTGCTGACTTaGTCCAGGGTAGGAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQLHSSPWHRKFCGRTEPSQLLT*SRVGAL Trigger: GAGAGCTCCTACCCTGGACCAAGTCAGCAGCTGGCT...TGGCTCTGTCCTACCACAGAATTTTCTGTGCCAAGGGCTAGAATGTAGTTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAGTCAGTGGAGTCTCCTaGTGGGGAAGAGCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPRESLSLLSVTLVLVRRVSGVS*WGRASC Trigger: GCAGCTGGCTCTTCCCCACCAGGAGACTCCACTGAC...TCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGGGTTGGAGCAGCTCCTaGCTGCTGTGGTGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALFAEWKFYLMFGSPVSLGWSSS*LLWWRG Trigger: CCCCCTCCACCACAGCAGCCAGGAGCTGCTCCAACC...CAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTATACAGTAGTGTACACACTGCTGATGTGAACCGACAGGCAGACACGTCAGTACTCAGAGAGGGCCAGTaGGTCATAGCTAGATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYSSVHTADVNRQADTSVLREGQ*VIARCG Trigger: ACCGCATCTAGCTATGACCCACTGGCCCTCTCTGAG...TACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | TTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTAAGGCAGCTTCTGCTTaGCAGCTGGATGTTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKGRKEEMGAYDRFRQDGKAASA*QLDVGN Trigger: ATTTCCAACATCCAGCTGTCAAGCAGAAGCTGCCTT...ACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | CTATACAGTAGTGTACACACTGCTGATGTGAACCGACAGGCAGACACGTCAGTATTGGTTAGTCACTTCTaGCAGAGTGTGCCGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LYSSVHTADVNRQADTSVLVSHF*QSVPSL Trigger: CAGCGACGGCACACTCTGTCAGAAGTGACTAACCAA...TACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | CTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCGTTCTAGCAAGATTCTaGAGATGTTGTCTAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTSSLCQCLTGLAADERSVLARF*RCCLNA Trigger: AGCATTTAGACAACATCTTCAGAATCTTGCTAGAAC...GGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTTCCTGCTGTGGTGAGAGCTaGGGGTGCATGCTGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLSVTLVLVRRKGLEASCCGES*GCMLAD Trigger: GTCTGCCAGCATGCACCCTCAGCTCTCACCACAGCA...GGAAGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGATCACCAGTCTCTTTGGAGAGGCTAGTTTACAGTAACAAAGCTAAGGGTTGCTGTGGTGAGAGCTaGGGGTGCATGCTGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FGSPVSLERLVYSNKAKGCCGES*GCMLAD Trigger: GTCTGCCAGCATGCACCCTCAGCTCTCACCACAGCA...ACCCTTAGCTTTGTTACTGTAAACTAGCCTCTCCAAAGAGACTGGTGATCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGAAGCTTCCATGAGTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGCATAAAGGCAGCTTCTaGTTGACAGCTGGATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGSFHESLGGGRHRSNQMHKGSF*LTAGCW Trigger: CCAACATCCAGCTGTCAAGCAGAAGCTGCCTTTATG...CATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGACTCATGGAAGCTTCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGGAGAAGAGTGTGCCGTCGCTaGCCACTGCGTGTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLPNGNFTSCLDHQSLWRRVCRR*PLRVAW Trigger: CCAGGCCACACGCAGTGGGCAGCGACGGCACACTCT...TCTCCAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CTATACAGTAGTGTACACACTGCTGATGTGAACCGACAGGCAGACACGTCAGTAGGAGAACATTTTCCCTaGCCCGGGCATCACAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LYSSVHTADVNRQADTSVGEHFP*PGHHNQ Trigger: TTGGTTGTGATGCCCGGGGCAGGGAAAATGTTCTCC...TACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CTATACAGTAGTGTACACACTGCTGATGTGAACCGACAGGCAGACACGTCAGTAGGCTTCTGGAGTCGATaGTGTAGGTACTGGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYSSVHTADVNRQADTSVGFWSR*CRYWVS Trigger: GGAAACCCAGTACCTACAGCATCGACTCCAGAAGCC...TACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | ACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCATCTGATTAAAATATaGTTGCAGCTGAGACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSSLCQCLTGLAADERSQHLIKI*LQLRLL Trigger: AAGCAGTCTCAGCTGCAAGCATATTTTAATCAGATG...CTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTCATCTGATTAAAATATaGTTGCAGCTGAGACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSLCQCLTGLAADERHLIKI*LQLRLL Trigger: AAGCAGTCTCAGCTGCAAGCATATTTTAATCAGATG...ACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CTTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGGTTTTCCTGTTCTTGTaGGTAGAGAATAGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LERKEGGNGSLRQVPAGWVFLFL*VENRPL Trigger: CAGAGGCCTATTCTCTACCCACAAGAACAGGAAAAC...CCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCCTTCTGCTTGACAGCTaGATGTTGGAAATGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSAAFKLLTASPQPLILLLDS*MLEMKR Trigger: CCTTTTCATTTCCAACATCCAGCTGTCAAGCAGAAG...GATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | TCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCTCTTCTGCTTGACAGCTaGATGTTGGAAATGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLGGGRHRSNQMSGGPIALLLDS*MLEMKR Trigger: CCTTTTCATTTCCAACATCCAGCTGTCAAGCAGAAG...AGCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | TCCCTCCTGCTATCTACTCCTGCTGTAACCCACAGCCCAATTCCAAGCAGAGCGCTTCTGCTTGACAGCTaGATGTTGGAAATGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLLSTPAVTHSPIPSRALLLDS*MLEMKR Trigger: CCTTTTCATTTCCAACATCCAGCTGTCAAGCAGAAG...CGCTCTGCTTGGAATTGGGCTGTGGGTTACAGCAGGAGTAGATAGCAGGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | GCTAAGCAGCTCACAACCCTGTTGGGGGACAGGGGTTTATGCCAATCTGCTGTGGGCATCACAACCAATTaGTTAGTCACTTCTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: AKQLTTLLGDRGLCQSAVGITTN*LVTSDR Trigger: TCTGTCAGAAGTGACTAACCAATTGGTTGTGATGCC...CACAGCAGATTGGCATAAACCCCTGTCCCCCAACAGGGTTGTGAGCTGCTTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CTTGGAAGCTTCCATGAGTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGGGGTTATCACTCATaGAGAACATTTTCCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGSFHESLGGGRHRSNQMRGYHS*RTFSLP Trigger: GGGCAGGGAAAATGTTCTCCATGAGTGATAACCCCT...CATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGACTCATGGAAGCTTCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | GGATCACCAGTCTCTTTGGAGAGGCTAGTTTACAGTAACAAAGCTAAGGGTTACCTGCTGGGATGTCAGTaGAGTCTCCTGGTGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSPVSLERLVYSNKAKGYLLGCQ*SLLVGK Trigger: CTTCCCCACCAGGAGACTCCACTGACATCCCAGCAG...GTAACCCTTAGCTTTGTTACTGTAAACTAGCCTCTCCAAAGAGACTGGTGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | CTATACAGTAGTGTACACACTGCTGATGTGAACCGACAGGCAGACACGTCAGTATCAACAGTCTTCTGCTaGTCAATCCCAAGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LYSSVHTADVNRQADTSVSTVFC*SIPRLC Trigger: GCACAGCCTTGGGATTGATCAGCAGAAGACTGTTGA...TACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | TTCAGATCCCACATGGTGGAAACAGATTCAAGAACCTTTGGGTTTAGCAGGACAAAAGCTTCAAAGGCCTaGCTGGGGTCTTCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FRSHMVETDSRTFGFSRTKASKA*LGSSSA Trigger: GGCTGAGGAAGACCCCAGTCAGGCCTTTGAAGCTTT...TGTCCTGCTAAACCCAAAGGTTCTTGAATCTGTTTCCACCATGTGGGATCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | AGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAATGCTGTGGTGAGAGCTaGGGGTGCATGCTGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLSLLSVTLVLVRRKGLECCGES*GCMLAD Trigger: GTCTGCCAGCATGCACCCTCAGCTCTCACCACAGCA...TTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | CTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTCGGCAAAGTTGCCCTTaGCCAGCGTGCCCTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSVTLVLVRRKGLEARQSCP*PACPRC Trigger: ACATCGAGGGCACGCTGGGCAAGGGCAACTTTGCCG...AGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | GAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGCCTTCAGGTCTCTGTaGACTACCTTCCGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ESLSLLSVTLVLVRRKGLAFRSL*TTFRPW Trigger: CCATGGCCGGAAGGTAGTGCACAGAGACCTGAAGGC...CAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | CTATACAGTAGTGTACACACTGCTGATGTGAACCGACAGGCAGACACGTCAGTAGCTGCCACACCATGTTaGCAGCAGTTCACCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LYSSVHTADVNRQADTSVAATPC*QQFTSF Trigger: AAAACTGGTGAACTGCTGGCAACATGGTGTGGCAGC...TACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | TTTGGATCACCAGTCTCTTTGGAGAGGCTAGTTTACAGTAACAAAGCTAAGGGTACTTCTGACAGAGTGTaGCGTCGCTGCCCACTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FGSPVSLERLVYSNKAKGTSDRV*RRCPLR Trigger: ACGCAGTGGGCAGCGACGGCACACTCTGTCAGAAGT...ACCCTTAGCTTTGTTACTGTAAACTAGCCTCTCCAAAGAGACTGGTGATCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | AGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTTCCACTTCTGACAGAGTGTaGCGTCGCTGCCCACTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLSVTLVLVRRKGLEASTSDRV*RRCPLR Trigger: ACGCAGTGGGCAGCGACGGCACACTCTGTCAGAAGT...GGAAGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | TTCAGATCCCACATGGTGGAAACAGATTCAAGAACCTTTGGGTTTAGCAGGACACTGAATGATGGGGGCTaGTGGGATGTCAGTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FRSHMVETDSRTFGFSRTLNDGG*WDVSGV Trigger: GACTCCACTGACATCCCAGCAGCCCCCATCATTCAG...TGTCCTGCTAAACCCAAAGGTTCTTGAATCTGTTTCCACCATGTGGGATCTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| CDS-3UTR GCA 90 bp | AGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTTCCCCTGTGAGGTTGCTCTaGTGGGCTCCATCCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLSVTLVLVRRKGLEASPVRLL*WAPSTG Trigger: TCCTGTGGATGGAGCCCAGCAGAGCAACCTCACAGG...GGAAGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | TCTCCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGACAGTCTCACGTTCGGTaGATGCAAGGTCACTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPRESLSLLSVTLVLVRRQSHVR*MQGHWQ Trigger: CTGCCAGTGACCTTGCATCCACCGAACGTGAGACTG...TCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | AGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAACTGCTGGGCAGTGACTaGCATCCCTTCCTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLLSVTLVLVRRKGLELLGSD*HPFLTR Trigger: CCTGGTGAGGAAGGGATGCCAGTCACTGCCCAGCAG...TTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | CTTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGGGCATCACAACCAATTaGTTAGTCACTTCTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LERKEGGNGSLRQVPAGWGITTN*LVTSDR Trigger: TCTGTCAGAAGTGACTAACCAATTGGTTGTGATGCC...CCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | GGTAGCCGTGGAACTAGGGATGTCTACTTGAAAGGAAGGAAGGAGGAAATGGGAAGGGGTTATCACTCATaGAGAACATTTTCCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSRGTRDVYLKGRKEEMGRGYHS*RTFSLP Trigger: GGGCAGGGAAAATGTTCTCCATGAGTGATAACCCCT...TCCCATTTCCTCCTTCCTTCCTTTCAAGTAGACATCCCTAGTTCCACGGCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | GGTAGCCGTGGAACTAGGGATGTCTACTTGAAAGGAAGGAAGGAGGAAATGGGACGATGCTGTAGGTACTaGGTTTCCAAGCTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSRGTRDVYLKGRKEEMGRCCRY*VSKLCC Trigger: ACAGCAAAGCTTGGAAACCCAGTACCTACAGCATCG...TCCCATTTCCTCCTTCCTTCCTTTCAAGTAGACATCCCTAGTTCCACGGCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAAGCCAGCTGCTGACTTaGTCCAGGGTAGGAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRESLSLLSVTLVLVRRKSQLLT*SRVGAL Trigger: GAGAGCTCCTACCCTGGACCAAGTCAGCAGCTGGCT...TTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTTCCACAGGACTCAGGGCCTaGGTCAGGCTGAATGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSVTLVLVRRKGLEASTGLRA*VRLNDG Trigger: CCCATCATTCAGCCTGACCCAGGCCCTGAGTCCTGT...GGAAGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAACAGGACTCAGGGCCTaGGTCAGGCTGAATGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRESLSLLSVTLVLVRRKTGLRA*VRLNDG Trigger: CCCATCATTCAGCCTGACCCAGGCCCTGAGTCCTGT...TTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGCCGTGGAACTAGGGATGTCTACTTGAAAGGAAGGAAGGAGGAAATGGGATTGGTACAGAAGAAGTaGTGCTTGGCAGCTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRGTRDVYLKGRKEEMGLVQKK*CLAAHK Trigger: CTTGTGAGCTGCCAAGCACCACTTCTTCTGTACCAA...TCCCATTTCCTCCTTCCTTCCTTTCAAGTAGACATCCCTAGTTCCACGGCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTTGAGTCACCAACACTGATACCCATTGTGTTGTaGATCCACAGCTTCTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PTTTVSGQPQGLLESPTLIPIVL*IHSFYH Trigger: ATGGTAGAAGCTGTGGATCCACAACACAATGGGTAT...CAGTGTTGGTGACTCAAGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | CTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAACACAATCTTCTGACATaGAATAAGGAATCCGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: LTGLAADERSQLLSAAFKHNLLT*NKESGI Trigger: GATTCCGGATTCCTTATTTCATGTCAGAAGATTGTG...TTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | CTATACAGTAGTGTACACACTGCTGATGTGAACCGACAGGCAGACACGTCAGTATCCACTTGTGCTCCTTaGTTTGAGCTATGCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LYSSVHTADVNRQADTSVSTCAP*FELCLA Trigger: GGCTAAGCATAGCTCAAATCAAGGAGCACAAGTGGA...TACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | CTATACAGTAGTGTACACACTGCTGATGTGAACCGACAGGCAGACACGTCAGTAAAGGCAGCTTCTGCTTaGCAGCTGGATGTTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LYSSVHTADVNRQADTSVKAASA*QLDVGN Trigger: ATTTCCAACATCCAGCTGTCAAGCAGAAGCTGCCTT...TACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | GGATCACCAGTCTCTTTGGAGAGGCTAGTTTACAGTAACAAAGCTAAGGGTTACTTGGTTAGTCACTTCTaGCAGAGTGTGCCGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSPVSLERLVYSNKAKGYLVSHF*QSVPSL Trigger: CAGCGACGGCACACTCTGTCAGAAGTGACTAACCAA...GTAACCCTTAGCTTTGTTACTGTAAACTAGCCTCTCCAAAGAGACTGGTGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | GCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGGGCCTCCACATTGGATaGCTGTGGGAGGAGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALFAEWKFYLMFGSPVSLGLHIG*LWEEGR Trigger: TCTACCCTCCTCCCACAGGCATCCAATGTGGAGGCC...CAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | TCTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACCATCTGATTAAAATATaGTTGCAGCTGAGACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRSSQGDCPHLLSVSVPNHLIKI*LQLRLL Trigger: AAGCAGTCTCAGCTGCAAGCATATTTTAATCAGATG...GTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGCCGTGGAACTAGGGATGTCTACTTGAAAGGAAGGAAGGAGGAAATGGGACTATGCTTAGCCGTTTaGAAGGATCTAGGACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GSRGTRDVYLKGRKEEMGLCLAV*KDLGPT Trigger: TGTTGGTCCTAGATCCTTCCAAACGGCTAAGCATAG...TCCCATTTCCTCCTTCCTTCCTTTCAAGTAGACATCCCTAGTTCCACGGCTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | AGACAGGGTTCTGGGATCAGTACCAGCTGCTACTCAAGTGTCCTGGAAACACAACCACAGTTTGTGCCTTaGCAACTGTTTGTTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RQGSGISTSCYSSVLETQPQFVP*QLFVQQ Trigger: TTGCTGAACAAACAGTTGCCAAGGCACAAACTGTGG...TTGTGTTTCCAGGACACTTGAGTAGCAGCTGGTACTGATCCCAGAACCCTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | AGTACCAGCTGCTACTCAAGTGTCCTGGAAACACAACTTAGGCTCTGCTGCTTTCCAAGCCTTCATCAATaGAGGTCTCCATCATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: STSCYSSVLETQLRLCCFPSLHQ*RSPSYC Trigger: GCAGTATGATGGAGACCTCCATTGATGAAGGCTTGG...AAAGCAGCAGAGCCTAAGTTGTGTTTCCAGGACACTTGAGTAGCAGCTGGTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAACTGCTGGGATGTCAGTaGAGTCTCCTGGTGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSLLSVTLVLVRRKGLELLGCQ*SLLVGK Trigger: CTTCCCCACCAGGAGACTCCACTGACATCCCAGCAG...TTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTCTGCTGGGATGTCAGTaGAGTCTCCTGGTGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSVTLVLVRRKGLEALLGCQ*SLLVGK Trigger: CTTCCCCACCAGGAGACTCCACTGACATCCCAGCAG...AGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGACAGGACTCAGGGCCTaGGTCAGGCTGAATGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALFAEWKFYLMFGSPVSLTGLRA*VRLNDG Trigger: CCCATCATTCAGCCTGACCCAGGCCCTGAGTCCTGT...CAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGGAGACATACTGCTGGGCAGTaGCTGGCATCCCTTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLPNGNFTSCLDHQSLWRHTAGQ*LASLPH Trigger: GTGAGGAAGGGATGCCAGTCACTGCCCAGCAGTATG...TCTCCAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTTCTAGCAAGATTCTaGAGATGTTGTCTAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAFKLLTASPQPLICCLTVLARF*RCCLNA Trigger: AGCATTTAGACAACATCTTCAGAATCTTGCTAGAAC...AGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGGAGAGGGGGTGGTGGCTGCTaGTGTTGCTGCAATTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPNGNFTSCLDHQSLWRGGGGC*CCCNCE Trigger: CTCACAATTGCAGCAACATCAGCAGCCACCACCCCC...TCTCCAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTCTGGAGTCGATaGTGTAGGTACTGGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRESLSLLSVTLVLVRRKGFWSR*CRYWVS Trigger: GGAAACCCAGTACCTACAGCATCGACTCCAGAAGCC...TTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTCTGAATGATGGGGGCTaGTGGGATGTCAGTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSVTLVLVRRKGLEALNDGG*WDVSGV Trigger: GACTCCACTGACATCCCAGCAGCCCCCATCATTCAG...AGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGCAGTCTCACGTTCGGTaGATGCAAGGTCACTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALFAEWKFYLMFGSPVSLQSHVR*MQGHWQ Trigger: CTGCCAGTGACCTTGCATCCACCGAACGTGAGACTG...CAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTTCCCACATTGGATGCCTGTaGGAGGAGGGTAGATCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLLSVTLVLVRRKGLEASHIGCL*EEGRSH Trigger: ATGCGATCTACCCTCCTCCCACAGGCATCCAATGTG...GGAAGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAGAGTCGCTTCTGTTaGAGCCTATGCTCCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPRESLSLLSVTLVLVRRKSRFC*SLCSCS Trigger: GCTACAGGAGCATAGGCTCCAACAGAAGCGACTCTT...TCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TTGCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTACAGGACTCAGGGCCTaGGTCAGGCTGAATGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHFLPNGNFTSCLDHQSLTGLRA*VRLNDG Trigger: CCCATCATTCAGCCTGACCCAGGCCCTGAGTCCTGT...AAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TTGCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTGGGAGTAGAGGGCAGTaGCTGCAACTGCATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHFLPNGNFTSCLDHQSLGSRGQ*LQLHLW Trigger: CCAGAGATGCAGTTGCAGCCACTGCCCTCTACTCCC...AAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTATACAGTAGTGTACACACTGCTGATGTGAACCGACAGGCAGACACGTCAGTAAGAAGAAGTGGTGCTTaGCAGCTCACAAGTCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: LYSSVHTADVNRQADTSVRRSGA*QLTSLI Trigger: TATCAGACTTGTGAGCTGCCAAGCACCACTTCTTCT...TACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTCTCAGAGAGGGCCAGTaGGTCATAGCTAGATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSVTLVLVRRKGLEALREGQ*VIARCG Trigger: ACCGCATCTAGCTATGACCCACTGGCCCTCTCTGAG...AGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTATACAGTAGTGTACACACTGCTGATGTGAACCGACAGGCAGACACGTCAGTAAACCCCATTGTGTTGTaGATCCACAGCTTCTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYSSVHTADVNRQADTSVNPIVL*IHSFYH Trigger: ATGGTAGAAGCTGTGGATCCACAACACAATGGGGTT...TACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041375.11 |
||
| CDS-3UTR TCA 90 bp | TCTCCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGATCCACTTGTGCTCCTTaGTTTGAGCTATGCTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPRESLSLLSVTLVLVRRSTCAP*FELCLA Trigger: GGCTAAGCATAGCTCAAATCAAGGAGCACAAGTGGA...TCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | AGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAACGGCCATCAAGTCTCTaGTCCACAGGAAAACTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSLLSVTLVLVRRKGLERPSSL*STGKLL Trigger: GAGCAGTTTTCCTGTGGAGCAGAGACTTGATGGCCG...TTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGATCACCAGTCTCTTTGGAGAGGCTAGTTTACAGTAACAAAGCTAAGGGTCAGCCCCACAGTTTGTaGCTTGGCAACTGTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FGSPVSLERLVYSNKAKGQPHSL*LGNCLF Trigger: GAACAAACAGTTGCCAAGGCACAAACTGTGGGGCTG...ACCCTTAGCTTTGTTACTGTAAACTAGCCTCTCCAAAGAGACTGGTGATCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | GCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGACGTATCTGATGCTCTaGGGCCTTCTCGGAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALFAEWKFYLMFGSPVSLTYLML*GLLGSS Trigger: TGAGCTTCCGAGAAGGCCGCAGAGCATCAGATACGT...CAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | AGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGTAGAGGGCAGTGGCTaGAACTGCATCTCTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLLSVTLVLVRRKGLEVEGSG*NCISGY Trigger: ATACCCAGAGATGCAGTTGCAGCCACTGCCCTCTAC...TTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAGTACAGAAGAAGTGGTaGTTGGCAGCTCACAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPRESLSLLSVTLVLVRRVQKKW*LAAHKS Trigger: AGACTTGTGAGCTGCCAAGCACCACTTCTTCTGTAC...TCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGGAGACAGTCTCACGTTCGGTaGATGCAAGGTCACTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPNGNFTSCLDHQSLWRQSHVR*MQGHWQ Trigger: CTGCCAGTGACCTTGCATCCACCGAACGTGAGACTG...TCTCCAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TTGCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTAAAAGGCCTCCACATTaGATGCCTGTGGGAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHFLPNGNFTSCLDHQSLKRPPH*MPVGGG Trigger: CCCTCCTCCCACAGGCATCCAATGTGGAGGCCTTTT...AAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTTCTCCATCATACTGCTaGGCAGTGACTGGCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSVTLVLVRRKGLEASPSYC*AVTGIP Trigger: AGGGATGCCAGTCACTGCCCAGCAGTATGATGGAGA...AGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TTGCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTCTTCAAAGGCCTGACTaGGGTCTTCCTCAGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHFLPNGNFTSCLDHQSLLQRPD*GLPQPL Trigger: GAGAGGCTGAGGAAGACCCCAGTCAGGCCTTTGAAG...AAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGAAGTTCAGGTCCCTCTaGGCAGACCCCATATCATAC | + |
|
Preference number: 4 (lower is better) Translates to: ESLSLLSVTLVLVRRKGLKFRSL*ADPISY Trigger: GTATGATATGGGGTCTGCCCAGAGGGACCTGAACTT...CAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGATCACCAGTCTCTTTGGAGAGGCTAGTTTACAGTAACAAAGCTAAGGGTAAGAGTCGCTTCTGTTaGAGCCTATGCTCCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FGSPVSLERLVYSNKAKGKSRFC*SLCSCS Trigger: GCTACAGGAGCATAGGCTCCAACAGAAGCGACTCTT...ACCCTTAGCTTTGTTACTGTAAACTAGCCTCTCCAAAGAGACTGGTGATCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR CAA 72 bp | GTTTCTAGAGGCAGCATCTGTGGAGTAGCTCTCTTCTaGTGCTTTAAGGAAGACGCTTTGTGCTTAGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSRGSICGVALF*CFKEDALCLVH Trigger: ATGCACTAAGCACAAAGCGTCTTCCTTAAAGCACAAGAAGAGAGCTACTCCACAGATGCTGCCTCTAGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR CAA 72 bp | TTTGTGATGGTCTTGAGGACACCCTGCATCAACATCTaGATATGCCTTGAAGTACTTTGCTGTTGCCTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FVMVLRTPCINI*ICLEVLCCCLA Trigger: GGCTAGGCAACAGCAAAGTACTTCAAGGCATATCAAGATGTTGATGCAGGGTGTCCTCAAGACCATCACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGATTGTGCTCCTTGATTTaGGCTATGCTTAGCCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPRESLSLLSVTLVLVRRLCSLI*AMLSRL Trigger: CAAACGGCTAAGCATAGCTCAAATCAAGGAGCACAA...TCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGATCACCAGTCTCTTTGGAGAGGCTAGTTTACAGTAACAAAGCTAAGGGTGAAAGGTCTTGGAGCTaGGGAGCAGTTGATGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FGSPVSLERLVYSNKAKGERSWS*GAVDVK Trigger: CTTAACATCAACTGCTCCTCAGCTCCAAGACCTTTC...ACCCTTAGCTTTGTTACTGTAAACTAGCCTCTCCAAAGAGACTGGTGATCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | AGTAAATGCTGGGACAACATTCTCCTTCAGTCTAAAGAAATCAAGCCCCACTTTGCTGCCACACCATGTTaGCAGCAGTTCACCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKCWDNILLQSKEIKPHFAATPC*QQFTSF Trigger: AAAACTGGTGAACTGCTGGCAACATGGTGTGGCAGC...AAAGTGGGGCTTGATTTCTTTAGACTGAAGGAGAATGTTGTCCCAGCATTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | TTGCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTAGGTCTCCATCATACTaGTGGGCAGTGACTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LHFLPNGNFTSCLDHQSLRSPSY*WAVTGI Trigger: GATGCCAGTCACTGCCCAGCAGTATGATGGAGACCT...AAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGCCATATATCCAGCTGTaGTCCTTCATACTGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALFAEWKFYLMFGSPVSLPYIQL*SFILLP Trigger: GGGCAGCAGTATGAAGGACCACAGCTGGATATATGG...CAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTGCAGCCATTCACCTTTaGAGTGTCGACACACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSVTLVLVRRKGLEAAAIHL*SVDTLF Trigger: GAAGAGTGTGTCGACACTCCAAAGGTGAATGGCTGC...AGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGGCAGCCATTCACCTTTaGAGTGTCGACACACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALFAEWKFYLMFGSPVSLAAIHL*SVDTLF Trigger: GAAGAGTGTGTCGACACTCCAAAGGTGAATGGCTGC...CAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTTCCAGGGGTTATCACTCATaGAGAACATTTTCCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLSVTLVLVRRKGLEASRGYHS*RTFSLP Trigger: GGGCAGGGAAAATGTTCTCCATGAGTGATAACCCCT...GGAAGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAATTGGTACAGAAGAAGTaGTGCTTGGCAGCTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRESLSLLSVTLVLVRRKLVQKK*CLAAHK Trigger: CTTGTGAGCTGCCAAGCACCACTTCTTCTGTACCAA...TTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| 3UTR CAA 72 bp | GAAGGCACACACTACACAGGGCATGTGAAAGTTCCTTaGTTGTGCGTCTTTAAAATGTCTAAGCCCTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: EGTHYTGHVKVP*LCVFKMSKPCM Trigger: CATACAGGGCTTAGACATTTTAAAGACGCACAACAAAGGAACTTTCACATGCCCTGTGTAGTGTGTGCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| CDS-3UTR TCA 90 bp | GCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGAAGGCAGCTTCTGCTTaGCAGCTGGATGTTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALFAEWKFYLMFGSPVSLKAASA*QLDVGN Trigger: ATTTCCAACATCCAGCTGTCAAGCAGAAGCTGCCTT...CAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | GGATCACCAGTCTCTTTGGAGAGGCTAGTTTACAGTAACAAAGCTAAGGGTTACGCTCCACAGGAAAACTaGTCCTATGTGATTTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSPVSLERLVYSNKAKGYAPQEN*SYVILD Trigger: GTCTAAAATCACATAGGAGCAGTTTTCCTGTGGAGC...GTAACCCTTAGCTTTGTTACTGTAAACTAGCCTCTCCAAAGAGACTGGTGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTGTACAGAAGAAGTGGTaGTTGGCAGCTCACAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSVTLVLVRRKGLEAVQKKW*LAAHKS Trigger: AGACTTGTGAGCTGCCAAGCACCACTTCTTCTGTAC...AGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTCCAAGCCTTCATCAATaGAGGTCTCCATCATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSVTLVLVRRKGLEAPSLHQ*RSPSYC Trigger: GCAGTATGATGGAGACCTCCATTGATGAAGGCTTGG...AGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TTGCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTAAGTTCAGGTCCCTCTaGGCAGACCCCATATCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LHFLPNGNFTSCLDHQSLKFRSL*ADPISY Trigger: GTATGATATGGGGTCTGCCCAGAGGGACCTGAACTT...AAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTCGATGCTGTAGGTACTaGGTTTCCAAGCTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSVTLVLVRRKGLEARCCRY*VSKLCC Trigger: ACAGCAAAGCTTGGAAACCCAGTACCTACAGCATCG...AGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGAGAAGAAGTGGTGCTTaGCAGCTCACAAGTCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: ESLSLLSVTLVLVRRKGLRRSGA*QLTSLI Trigger: TATCAGACTTGTGAGCTGCCAAGCACCACTTCTTCT...CAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAACTTCTGCTTGACAGCTaGATGTTGGAAATGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRESLSLLSVTLVLVRRKLLLDS*MLEMKR Trigger: CCTTTTCATTTCCAACATCCAGCTGTCAAGCAGAAG...TTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TTGCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTCCAAGCCTTCATCAATaGAGGTCTCCATCATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHFLPNGNFTSCLDHQSLPSLHQ*RSPSYC Trigger: GCAGTATGATGGAGACCTCCATTGATGAAGGCTTGG...AAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGATCACCAGTCTCTTTGGAGAGGCTAGTTTACAGTAACAAAGCTAAGGGTGGCATCACAACCAATTaGTTAGTCACTTCTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FGSPVSLERLVYSNKAKGGITTN*LVTSDR Trigger: TCTGTCAGAAGTGACTAACCAATTGGTTGTGATGCC...ACCCTTAGCTTTGTTACTGTAAACTAGCCTCTCCAAAGAGACTGGTGATCCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTCTCTTTACAATACACTaGACAAGGACTCTGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSVTLVLVRRKGLEALFTIH*TRTLGL Trigger: AAGGCCCAGAGTCCTTGTCCAGTGTATTGTAAAGAG...AGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | TTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGGAGATTGGTACAGAAGAAGTaGTGCTTGGCAGCTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPNGNFTSCLDHQSLWRLVQKK*CLAAHK Trigger: CTTGTGAGCTGCCAAGCACCACTTCTTCTGTACCAA...TCTCCAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | TTGCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTTGTGCTCCTTGATTTaGGCTATGCTTAGCCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHFLPNGNFTSCLDHQSLLCSLI*AMLSRL Trigger: CAAACGGCTAAGCATAGCTCAAATCAAGGAGCACAA...AAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CCA 90 bp | AGTAAATGCTGGGACAACATTCTCCTTCAGTCTAAAGAAATCAAGCCCCACTTTGGCATCACAACCAATTaGTTAGTCACTTCTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKCWDNILLQSKEIKPHFGITTN*LVTSDR Trigger: TCTGTCAGAAGTGACTAACCAATTGGTTGTGATGCC...AAAGTGGGGCTTGATTTCTTTAGACTGAAGGAGAATGTTGTCCCAGCATTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| 3UTR CAA 72 bp | TGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTaGGAGAGGCTAGTTTACAGTAACAAAGCTAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WKFYLMFGSPVS*ERLVYSNKAKG Trigger: ACCCTTAGCTTTGTTACTGTAAACTAGCCTCTCCAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR TCA 90 bp | GCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTTGGTTCTAGCAAGATTCTaGAGATGTTGTCTAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALFAEWKFYLMFGSPVSLVLARF*RCCLNA Trigger: AGCATTTAGACAACATCTTCAGAATCTTGCTAGAAC...CAAAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS GCA 90 bp | TCGAGGACAGGACTCAGGGCCTGGGTCAGGCTGAATGATGGGGGCTaGTGGGATGTCAGTGGAGTCTCCTGGTGGGGAAGAGCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRTGLRAWVRLNDGG*WDVSGVSWWGRASC Trigger: GCAGCTGGCTCTTCCCCACCAGGAGACTCCACTGACATCCCAGCAGCCCCCATCATTCAGCCTGACCCAGGCCCTGAGTCCTGTCCTCGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS CCA 90 bp | TCTGATGCTCTGCGGCCTTCTCGGAAGCTCACGGGGGACCGGTTGTaGGCCTCACGCTTCTGTGAGCTCAGAGCCTGCATGGCTGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SDALRPSRKLTGDRL*ASRFCELRACMAGL Trigger: CAACCCAGCCATGCAGGCTCTGAGCTCACAGAAGCGTGAGGCCCACAACCGGTCCCCCGTGAGCTTCCGAGAAGGCCGCAGAGCATCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS TCA 90 bp | AGAGAGGGCCAGTGGGTCATAGCTAGATGCGGTGTCCTGAAGTCCTaGGCTCCTGGGACAGTCCGCCCCTGTGAGGTTGCTCTGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: REGQWVIARCGVLKS*APGTVRPCEVALLG Trigger: GCCCAGCAGAGCAACCTCACAGGGGCGGACTGTCCCAGGAGCTCAGGACTTCAGGACACCGCATCTAGCTATGACCCACTGGCCCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | TCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTTCCGCCCCTGTGAGGTaGCTCTGCTGGGCTCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SDSLSAAPHLLPNCPAIASAPVR*LCWAPS Trigger: GGATGGAGCCCAGCAGAGCAACCTCACAGGGGCGGA...AGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS TCA 90 bp | ATGCGGTGTCCTGAAGTCCTGAGCTCCTGGGACAGTCCGCCCCTGTaGGGTTGCTCTGCTGGGCTCCATCCACAGGATAGTGACAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: MRCPEVLSSWDSPPL*GCSAGLHPQDSDRK Trigger: CTTCCTGTCACTATCCTGTGGATGGAGCCCAGCAGAGCAACCTCACAGGGGCGGACTGTCCCAGGAGCTCAGGACTTCAGGACACCGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCACGGCAAAGTTGCCCTaGCCCAGCGTGCCCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SQLLSAAFKLLTASPQPLTAKLP*PSVPSM Trigger: CATCGAGGGCACGCTGGGCAAGGGCAACTTTGCCGT...GAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | TCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTACGGCAAAGTTGCCCTaGCCCAGCGTGCCCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SDSLSAAPHLLPNCPAIATAKLP*PSVPSM Trigger: CATCGAGGGCACGCTGGGCAAGGGCAACTTTGCCGT...AGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | CTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGTCCGCCCCTGTGAGGTaGCTCTGCTGGGCTCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LHKATVLTSSLCQCLTGLSAPVR*LCWAPS Trigger: GGATGGAGCCCAGCAGAGCAACCTCACAGGGGCGGA...CAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTCCGCCCCTGTGAGGTaGCTCTGCTGGGCTCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: QLLSAAFKLLTASPQPLISAPVR*LCWAPS Trigger: GGATGGAGCCCAGCAGAGCAACCTCACAGGGGCGGA...GATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS GCA 90 bp | GCCCCGGGCATCACAACCAATTGGTTAGTCACTTCTGACAGAGTGTaGCGTCGCTGCCCACTGCGTGTGGCCTGGAAAGCTTCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: APGITTNWLVTSDRV*RRCPLRVAWKASKA Trigger: GGCCTTTGAAGCTTTCCAGGCCACACGCAGTGGGCAGCGACGGCACACTCTGTCAGAAGTGACTAACCAATTGGTTGTGATGCCCGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS CCA 90 bp | GGATGCCTGTGGGAGGAGGGTAGATCGCATCAGTCTCACGTTCGGTaGATGCAAGGTCACTGGCAGCCCCACAGTTTGTGCCTTGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GCLWEEGRSHQSHVR*MQGHWQPHSLCLGN Trigger: GTTGCCAAGGCACAAACTGTGGGGCTGCCAGTGACCTTGCATCCACCGAACGTGAGACTGATGCGATCTACCCTCCTCCCACAGGCATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS CCA 90 bp | AATTGCATCTGCTCAGAAGAGGGCTCGAGGACAGGACTCAGGGCCTaGGTCAGGCTGAATGATGGGGGCTGCTGGGATGTCAGTGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: NCICSEEGSRTGLRA*VRLNDGGCWDVSGV Trigger: GACTCCACTGACATCCCAGCAGCCCCCATCATTCAGCCTGACCCAGGCCCTGAGTCCTGTCCTCGAGCCCTCTTCTGAGCAGATGCAATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | CTTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGATAGCCACCTCCGTCTaGGTGATCCGGTGCCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LERKEGGNGSLRQVPAGWIATSV*VIRCRP Trigger: GGGGCGGCACCGGATCACCAAGACGGAGGTGGCTAT...CCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | CTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAAATAGCCACCTCCGTCTaGGTGATCCGGTGCCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LTGLAADERSQLLSAAFKIATSV*VIRCRP Trigger: GGGGCGGCACCGGATCACCAAGACGGAGGTGGCTAT...TTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCGAGCCAGCTGCTGACTaGGTCCAGGGTAGGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQLLSAAFKLLTASPQPLEPAAD*VQGRSS Trigger: AGAGCTCCTACCCTGGACCAAGTCAGCAGCTGGCTC...GAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTGAGCCAGCTGCTGACTaGGTCCAGGGTAGGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLCQCLTGLAADERSQLEPAAD*VQGRSS Trigger: AGAGCTCCTACCCTGGACCAAGTCAGCAGCTGGCTC...AAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS TCA 90 bp | CTCCAAGCCTTCATCAATGGAGGTCTCCATCATACTGCTGGGCAGTaGCTGGCATCCCTTCCTCACCAGGACAGGGGGCACAGGGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LQAFINGGLHHTAGQ*LASLPHQDRGHRVK Trigger: CTTGACCCTGTGCCCCCTGTCCTGGTGAGGAAGGGATGCCAGTCACTGCCCAGCAGTATGATGGAGACCTCCATTGATGAAGGCTTGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS TCA 90 bp | CATTTTCCCTGCCCCGGGCATCACAACCAATTGGTTAGTCACTTCTaGCAGAGTGTGCCGTCGCTGCCCACTGCGTGTGGCCTGGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: HFPCPGHHNQLVSHF*QSVPSLPTACGLES Trigger: GCTTTCCAGGCCACACGCAGTGGGCAGCGACGGCACACTCTGTCAGAAGTGACTAACCAATTGGTTGTGATGCCCGGGGCAGGGAAAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS GCA 90 bp | GCCTGTGGGAGGAGGGTAGATCGCATCAGTCTCACGTTCGGTGGATaGAAGGTCACTGGCAGCCCCACAGTTTGTGCCTTGGCAACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ACGRRVDRISLTFGG*KVTGSPTVCALATV Trigger: AACAGTTGCCAAGGCACAAACTGTGGGGCTGCCAGTGACCTTGCATCCACCGAACGTGAGACTGATGCGATCTACCCTCCTCCCACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS CCA 90 bp | AAGCCTTCATCAATGGAGGTCTCCATCATACTGCTGGGCAGTGACTaGCATCCCTTCCTCACCAGGACAGGGGGCACAGGGTCAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPSSMEVSIILLGSD*HPFLTRTGGTGSSR Trigger: CCTGCTTGACCCTGTGCCCCCTGTCCTGGTGAGGAAGGGATGCCAGTCACTGCCCAGCAGTATGATGGAGACCTCCATTGATGAAGGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS CCA 90 bp | AGCTTTGCTGTGGTGAGAGCTGAGGGTGCATGCTGGCAGACAGGCTaGAGACACTTTCCTGCTGCTGGGAGATTTCCTCCTGAGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SFAVVRAEGACWQTG*RHFPAAGRFPPEGN Trigger: GTTGCCCTCAGGAGGAAATCTCCCAGCAGCAGGAAAGTGTCTCCAGCCTGTCTGCCAGCATGCACCCTCAGCTCTCACCACAGCAAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTACGGCAAAGTTGCCCTaGCCCAGCGTGCCCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: AAFKLLTASPQPLICCLTTAKLP*PSVPSM Trigger: CATCGAGGGCACGCTGGGCAAGGGCAACTTTGCCGT...AGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTTTCACCACGGCAAAGTaGCCCTTGCCCAGCGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AAFKLLTASPQPLICCLTFTTAK*PLPSVP Trigger: GGGCACGCTGGGCAAGGGCAACTTTGCCGTGGTGAA...AGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | GACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTGCTGGCTGCCACACCATGTaGCCAGCAGTTCACCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: DSLSAAPHLLPNCPAIAAGCHTM*PAVHQF Trigger: AAACTGGTGAACTGCTGGCAACATGGTGTGGCAGCC...AGCAGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGGCTGCCACACCATGTaGCCAGCAGTTCACCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KATVLTSSLCQCLTGLAAGCHTM*PAVHQF Trigger: AAACTGGTGAACTGCTGGCAACATGGTGTGGCAGCC...AGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | CTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCGCCTGCATGGCTGGGTaGGCAGGTCTGAGGCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: LSAAFKLLTASPQPLICCACMAG*AGLRLM Trigger: CATAAGCCTCAGACCTGCCAACCCAGCCATGCAGGC...GCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | TCTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACGCCTGCATGGCTGGGTaGGCAGGTCTGAGGCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: SRSSQGDCPHLLSVSVPNACMAG*AGLRLM Trigger: CATAAGCCTCAGACCTGCCAACCCAGCCATGCAGGC...GTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | GGCACCAGTGGGGAGCCCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTAAGGACTCTGGGCCTTaGGCAGAAGATTGGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GTSGEPNNYSLWPASRTAKDSGP*AEDWAS Trigger: AGAAGCCCAATCTTCTGCCAAAGGCCCAGAGTCCTT...AGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGGGCTCCCCACTGGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | CTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGAGCCAGCTGCTGACTaGGTCCAGGGTAGGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHKATVLTSSLCQCLTGLEPAAD*VQGRSS Trigger: AGAGCTCCTACCCTGGACCAAGTCAGCAGCTGGCTC...CAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS GCA 90 bp | CTCCTTCTGTCTCCAAGCCTTCATCAATGGAGGTCTCCATCATACTaGTGGGCAGTGACTGGCATCCCTTCCTCACCAGGACAGGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLSPSLHQWRSPSY*WAVTGIPSSPGQGA Trigger: TGCCCCCTGTCCTGGTGAGGAAGGGATGCCAGTCACTGCCCAGCAGTATGATGGAGACCTCCATTGATGAAGGCTTGGAGACAGAAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS CCA 90 bp | CTTCTGTCTCCAAGCCTTCATCAATGGAGGTCTCCATCATACTGCTaGGCAGTGACTGGCATCCCTTCCTCACCAGGACAGGGGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LLSPSLHQWRSPSYC*AVTGIPSSPGQGAQ Trigger: CTGTGCCCCCTGTCCTGGTGAGGAAGGGATGCCAGTCACTGCCCAGCAGTATGATGGAGACCTCCATTGATGAAGGCTTGGAGACAGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS CCA 90 bp | GGGCCGGGAGTAGAGGGCAGTGGCTGCAACTGCATCTCTGGGTATTaGCTGAGGAAAGAGCTAAATTGCATCTGCTCAGAAGAGGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GPGVEGSGCNCISGY*LRKELNCICSEEGS Trigger: CGAGCCCTCTTCTGAGCAGATGCAATTTAGCTCTTTCCTCAGCCAATACCCAGAGATGCAGTTGCAGCCACTGCCCTCTACTCCCGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | AGACAGGGTTCTGGGATCAGTACCAGCTGCTACTCAAGTGTCCTGGAAACACAAATAGCCACCTCCGTCTaGGTGATCCGGTGCCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RQGSGISTSCYSSVLETQIATSV*VIRCRP Trigger: GGGGCGGCACCGGATCACCAAGACGGAGGTGGCTAT...TTGTGTTTCCAGGACACTTGAGTAGCAGCTGGTACTGATCCCAGAACCCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTGGCTGCCACACCATGTaGCCAGCAGTTCACCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSLCQCLTGLAADERSQLGCHTM*PAVHQF Trigger: AAACTGGTGAACTGCTGGCAACATGGTGTGGCAGCC...AAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | GACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTGCTGGCAGCCATTCACCTTaGGAGTGTCGACACACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DSLSAAPHLLPNCPAIAAGSHSP*ECRHTL Trigger: AAGAGTGTGTCGACACTCCAAAGGTGAATGGCTGCC...AGCAGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | CTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCGGCAGCCATTCACCTTaGGAGTGTCGACACACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LTSSLCQCLTGLAADERSGSHSP*ECRHTL Trigger: AAGAGTGTGTCGACACTCCAAAGGTGAATGGCTGCC...GGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTTCGCCTGCATGGCTGGGTaGGCAGGTCTGAGGCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: ERKEGGNGSLRQVPAGWFACMAG*AGLRLM Trigger: CATAAGCCTCAGACCTGCCAACCCAGCCATGCAGGC...GAACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS GCA 90 bp | GGCTGCAACTGCATCTCTGGGTATTGGCTGAGGAAAGAGCTAAATTaGATCTGCTCAGAAGAGGGCTCGAGGACAGGACTCAGGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GCNCISGYWLRKELN*ICSEEGSRTGLRAW Trigger: CCAGGCCCTGAGTCCTGTCCTCGAGCCCTCTTCTGAGCAGATGCAATTTAGCTCTTTCCTCAGCCAATACCCAGAGATGCAGTTGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 90 bp | ACTGGGTTTCCAAGCTTTGCTGTGGTGAGAGCTGAGGGTGCATGCTaGCAGACAGGCTGGAGACACTTTCCTGCTGCTGGGAGATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TGFPSFAVVRAEGAC*QTGWRHFPAAGRFP Trigger: AGGAAATCTCCCAGCAGCAGGAAAGTGTCTCCAGCCTGTCTGCCAGCATGCACCCTCAGCTCTCACCACAGCAAAGCTTGGAAACCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS CCA 90 bp | AGCCTGGGGGCCGGGAGTAGAGGGCAGTGGCTGCAACTGCATCTCTaGGTATTGGCTGAGGAAAGAGCTAAATTGCATCTGCTCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLGAGSRGQWLQLHL*VLAEERAKLHLLRR Trigger: TCTTCTGAGCAGATGCAATTTAGCTCTTTCCTCAGCCAATACCCAGAGATGCAGTTGCAGCCACTGCCCTCTACTCCCGGCCCCCAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | TCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCTGGCTGCCACACCATGTaGCCAGCAGTTCACCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLGGGRHRSNQMSGGPIAGCHTM*PAVHQF Trigger: AAACTGGTGAACTGCTGGCAACATGGTGTGGCAGCC...AGCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | GACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTGCTGCTATGCTTAGCCGTTaGGAAGGATCTAGGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: DSLSAAPHLLPNCPAIAAAMLSR*EGSRTN Trigger: GTTGGTCCTAGATCCTTCCAAACGGCTAAGCATAGC...AGCAGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | CACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTATGCTTAGCCGTTaGGAAGGATCTAGGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HKATVLTSSLCQCLTGLAAMLSR*EGSRTN Trigger: GTTGGTCCTAGATCCTTCCAAACGGCTAAGCATAGC...GGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | CTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCGCTATGCTTAGCCGTTaGGAAGGATCTAGGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LTSSLCQCLTGLAADERSAMLSR*EGSRTN Trigger: GTTGGTCCTAGATCCTTCCAAACGGCTAAGCATAGC...GGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | GTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGTGGAGGGCCCATTGCGGCAGCCATTCACCTTaGGAGTGTCGACACACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VTRWGQTQKQSDEWRAHCGSHSP*ECRHTL Trigger: AAGAGTGTGTCGACACTCCAAAGGTGAATGGCTGCC...GCAATGGGCCCTCCACTCATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | GGCACCAGTGGGGAGCCCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTGAGGAAAGAGCTAAATaGCATCTGCTCAGAAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GTSGEPNNYSLWPASRTAEERAK*HLLRRG Trigger: CCCTCTTCTGAGCAGATGCAATTTAGCTCTTTCCTC...AGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGGGCTCCCCACTGGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCTGCTATCTACTCCTGCTGTAACCCACAGCCCAATTCCAAGCAGAGCGAGAACTGTAAGGAGGTaGGAGCAGCTCCTGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLLSTPAVTHSPIPSRARTVRR*EQLLAA Trigger: AGCAGCCAGGAGCTGCTCCAACCTCCTTACAGTTCT...CGCTCTGCTTGGAATTGGGCTGTGGGTTACAGCAGGAGTAGATAGCAGGAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | CTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGAAGAAGTGGTGCTaGGCAGCTCACAAGTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LTSSLCQCLTGLAADERSQKKWC*AAHKSD Trigger: ATCAGACTTGTGAGCTGCCAAGCACCACTTCTTCTG...GGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | ACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGACCAGGACATACCCATaGTGTTGTGGATCCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TSSLCQCLTGLAADERSQTRTYP*CCGSTA Trigger: AGCTGTGGATCCACAACACAATGGGTATGTCCTGGT...CTGGGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
||
| CDS GCA 90 bp | AACTGCATCTCTGGGTATTGGCTGAGGAAAGAGCTAAATTGCATCTaGTCAGAAGAGGGCTCGAGGACAGGACTCAGGGCCTGGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NCISGYWLRKELNCI*SEEGSRTGLRAWVR Trigger: CCTGACCCAGGCCCTGAGTCCTGTCCTCGAGCCCTCTTCTGAGCAGATGCAATTTAGCTCTTTCCTCAGCCAATACCCAGAGATGCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS CCA 90 bp | TGTGCCTTGGCAACTGTTTGTTCAGCAATGGTGCTAGGCCGACGCTaGCGGCCATCAAGTCTCTGCTCCACAGGAAAACTGCTCCTATGT | + |
|
Preference number: 5 (lower is better) Translates to: CALATVCSAMVLGRR*RPSSLCSTGKLLLC Trigger: ACATAGGAGCAGTTTTCCTGTGGAGCAGAGACTTGATGGCCGCCAGCGTCGGCCTAGCACCATTGCTGAACAAACAGTTGCCAAGGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS CCA 90 bp | TCACTCATGGAGAACATTTTCCCTGCCCCGGGCATCACAACCAATTaGTTAGTCACTTCTGACAGAGTGTGCCGTCGCTGCCCACTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: SLMENIFPAPGITTN*LVTSDRVCRRCPLR Trigger: ACGCAGTGGGCAGCGACGGCACACTCTGTCAGAAGTGACTAACCAATTGGTTGTGATGCCCGGGGCAGGGAAAATGTTCTCCATGAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS CCA 90 bp | TCCAGGCTCCGAGGTGGCTCTTTACAATACACTGGACAAGGACTCTaGGCCTTTGGCAGAAGATTGGGCTTCTGGAGTCGATGCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRLRGGSLQYTGQGL*AFGRRLGFWSRCCR Trigger: CCTACAGCATCGACTCCAGAAGCCCAATCTTCTGCCAAAGGCCCAGAGTCCTTGTCCAGTGTATTGTAAAGAGCCACCTCGGAGCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | CTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCCTGCATCTCTGGGTATaGGCTGAGGAAAGAGCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LTSSLCQCLTGLAADERSLHLWV*AEERAK Trigger: TTTAGCTCTTTCCTCAGCCAATACCCAGAGATGCAG...GGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | CTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAAAGAACTGTAAGGAGGTaGGAGCAGCTCCTGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LTGLAADERSQLLSAAFKRTVRR*EQLLAA Trigger: AGCAGCCAGGAGCTGCTCCAACCTCCTTACAGTTCT...TTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | GACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTGCTGACATACCCATTGTGTaGTGGATCCACAGCTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: DSLSAAPHLLPNCPAIAADIPIV*WIHSFY Trigger: GTAGAAGCTGTGGATCCACAACACAATGGGTATGTC...AGCAGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| CDS CCA 90 bp | GAGGGTAGATCGCATCAGTCTCACGTTCGGTGGATGCAAGGTCACTaGCAGCCCCACAGTTTGTGCCTTGGCAACTGTTTGTTCAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: EGRSHQSHVRWMQGH*QPHSLCLGNCLFSN Trigger: ATTGCTGAACAAACAGTTGCCAAGGCACAAACTGTGGGGCTGCCAGTGACCTTGCATCCACCGAACGTGAGACTGATGCGATCTACCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | GAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCAGAAGAAGTGGTGCTaGGCAGCTCACAAGTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ERSQLLSAAFKLLTASPQQKKWC*AAHKSD Trigger: ATCAGACTTGTGAGCTGCCAAGCACCACTTCTTCTG...CTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS TCA 90 bp | GCAGGTCTGAGGCTTATGAAAGGAGATGTCATGCGGGGTGACGGCTaGTTGGCTAACATGATGTCCTTCAAGGAAGGGCTGTCTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AGLRLMKGDVMRGDG*LANMMSFKEGLSSR Trigger: TCTGGAAGACAGCCCTTCCTTGAAGGACATCATGTTAGCCAATCAGCCGTCACCCCGCATGACATCTCCTTTCATAAGCCTCAGACCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS GCA 90 bp | TTCTGGAGGAAGAGTCGCTTCTGTTGGAGCCTATGCTCCTGTAGCTaGTGTTCCAGGCTCCGAGGTGGCTCTTTACAATACACTGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: FWRKSRFCWSLCSCS*CSRLRGGSLQYTGQ Trigger: TTGTCCAGTGTATTGTAAAGAGCCACCTCGGAGCCTGGAACAGCAGCTACAGGAGCATAGGCTCCAACAGAAGCGACTCTTCCTCCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 90 bp | ATGTCCTTCAAGGAAGGGCTGTCTTCCAGAAAGTTCAGGTCCCTCTaGGCAGACCCCATATCATACTCAGAGTCCACACTCTCAAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: MSFKEGLSSRKFRSL*ADPISYSESTLSRE Trigger: CTCCCTTGAGAGTGTGGACTCTGAGTATGATATGGGGTCTGCCCAGAGGGACCTGAACTTTCTGGAAGACAGCCCTTCCTTGAAGGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 90 bp | GGATGTCAGTGGAGTCTCCTGGTGGGGAAGAGCCAGCTGCTGACTTaGTCCAGGGTAGGAGCTCTCTGCTATCTGCATCTGATTAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: GCQWSLLVGKSQLLT*SRVGALCYLHLIKI Trigger: TATTTTAATCAGATGCAGATAGCAGAGAGCTCCTACCCTGGACCAAGTCAGCAGCTGGCTCTTCCCCACCAGGAGACTCCACTGACATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | TTCAGATCCCACATGGTGGAAACAGATTCAAGAACCTTTGGGTTTAGCAGGACAACGGCAAAGTTGCCCTaGCCCAGCGTGCCCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: FRSHMVETDSRTFGFSRTTAKLP*PSVPSM Trigger: CATCGAGGGCACGCTGGGCAAGGGCAACTTTGCCGT...TGTCCTGCTAAACCCAAAGGTTCTTGAATCTGTTTCCACCATGTGGGATCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | GAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGATAGCCACCTCCGTCTaGGTGATCCGGTGCCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ESLSLLSVTLVLVRRKGLIATSV*VIRCRP Trigger: GGGGCGGCACCGGATCACCAAGACGGAGGTGGCTAT...CAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | TTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTGGCAGCCATTCACCTTaGGAGTGTCGACACACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LKGRKEEMGAYDRFRQDGGSHSP*ECRHTL Trigger: AAGAGTGTGTCGACACTCCAAAGGTGAATGGCTGCC...ACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | TTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTAAGGACTCTGGGCCTTaGGCAGAAGATTGGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LKGRKEEMGAYDRFRQDGKDSGP*AEDWAS Trigger: AGAAGCCCAATCTTCTGCCAAAGGCCCAGAGTCCTT...ACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | CTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGAGGAAAGAGCTAAATaGCATCTGCTCAGAAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGLHKATVLTSSLCQCLTEERAK*HLLRRG Trigger: CCCTCTTCTGAGCAGATGCAATTTAGCTCTTTCCTC...TGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | CTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGAGGAAAGAGCTAAATaGCATCTGCTCAGAAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LHKATVLTSSLCQCLTGLEERAK*HLLRRG Trigger: CCCTCTTCTGAGCAGATGCAATTTAGCTCTTTCCTC...CAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | TCTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACCTGCATCTCTGGGTATaGGCTGAGGAAAGAGCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SRSSQGDCPHLLSVSVPNLHLWV*AEERAK Trigger: TTTAGCTCTTTCCTCAGCCAATACCCAGAGATGCAG...GTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | GAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGTTCCACAACCCCATTGTGTaGTGGATCCACAGCTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: ERKEGGNGSLRQVPAGWFHNPIV*WIHSFY Trigger: GTAGAAGCTGTGGATCCACAACACAATGGGGTTGTG...GAACCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041375.11 |
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| CDS CCA 90 bp | CTGCTGGGCTCCATCCACAGGATAGTGACAGGAAGCAGGATAGTTTaGTACAGAAGAAGTGGTGCTTGGCAGCTCACAAGTCTGATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLGSIHRIVTGSRIV*YRRSGAWQLTSLIG Trigger: TCCTATCAGACTTGTGAGCTGCCAAGCACCACTTCTTCTGTACCAAACTATCCTGCTTCCTGTCACTATCCTGTGGATGGAGCCCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | CTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCCGCTGATGAGCGTTCCGCATCCAGCTGTGACTaGTCTATTATTTTTATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTSSLCQCLTGLAADERSASSCD*SIIFIA Trigger: GGCTATAAAAATAATAGACAAGTCACAGCTGGATGC...GGAACGCTCATCAGCGGCCAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | CTTGAAAGGAAGGAAGGAGGAAATGGGAGCTTACGACAGGTTCCGGCAGGATGGCTGCATCTCTGGGTATaGGCTGAGGAAAGAGCTAAA | + |
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Preference number: 5 (lower is better) Translates to: LERKEGGNGSLRQVPAGWLHLWV*AEERAK Trigger: TTTAGCTCTTTCCTCAGCCAATACCCAGAGATGCAG...CCATCCTGCCGGAACCTGTCGTAAGCTCCCATTTCCTCCTTCCTTCCTTTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | GGTAGCCGTGGAACTAGGGATGTCTACTTGAAAGGAAGGAAGGAGGAAATGGGACAGCTCACAACCCCATaGTGTTGTGGATCCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSRGTRDVYLKGRKEEMGQLTTP*CCGSTA Trigger: AGCTGTGGATCCACAACACAATGGGGTTGTGAGCTG...TCCCATTTCCTCCTTCCTTCCTTTCAAGTAGACATCCCTAGTTCCACGGCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041375.11 |
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| CDS-3UTR CAA 90 bp | CTTGGAAGCTTCCATGAGTCACTAGGTGGGGGCAGACACAGAAGCAATCAGATGAGCCACTCCATTGTGTaGTGGATCCACAGCTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LGSFHESLGGGRHRSNQMSHSIV*WIHSFY Trigger: GTAGAAGCTGTGGATCCACAACACAATGGAGTGGCT...CATCTGATTGCTTCTGTGTCTGCCCCCACCTAGTGACTCATGGAAGCTTCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 |
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| CDS-3UTR CAA 90 bp | TCCCAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCGCATCCAGCTGTGACTaGTCTATTATTTTTATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SQLLSAAFKLLTASPQPLASSCD*SIIFIA Trigger: GGCTATAAAAATAATAGACAAGTCACAGCTGGATGC...GAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | CCAGTGGGGAGCCCAACAACTACAGTCTCTGGCCAGCCTCAAGGACTGCTTGAGTACAGCAATTGTACTTaGTTCAACTCCAGAATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PVGSPTTTVSGQPQGLLEYSNCT*FNSRIP Trigger: AGGAATTCTGGAGTTGAACAAAGTACAATTGCTGTA...CTCAAGCAGTCCTTGAGGCTGGCCAGAGACTGTAGTTGTTGGGCTCCCCACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS GCA 90 bp | TGGTCCAGGGTAGGAGCTCTCTGCTATCTGCATCTGATTAAAATATaGTTGCAGCTGAGACTGCTTCTGGAGGAAGAGTCGCTTCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WSRVGALCYLHLIKI*LQLRLLLEEESLLL Trigger: CAACAGAAGCGACTCTTCCTCCAGAAGCAGTCTCAGCTGCAAGCATATTTTAATCAGATGCAGATAGCAGAGAGCTCCTACCCTGGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 90 bp | CCACAGGATAGTGACAGGAAGCAGGATAGTTTGGTACAGAAGAAGTaGTGCTTGGCAGCTCACAAGTCTGATAGGAGAACTGTAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PQDSDRKQDSLVQKK*CLAAHKSDRRTVRR Trigger: CCTCCTTACAGTTCTCCTATCAGACTTGTGAGCTGCCAAGCACCACTTCTTCTGTACCAAACTATCCTGCTTCCTGTCACTATCCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | CTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGGCATCCAGCTGTGACTaGTCTATTATTTTTATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LHKATVLTSSLCQCLTGLASSCD*SIIFIA Trigger: GGCTATAAAAATAATAGACAAGTCACAGCTGGATGC...CAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | AGTAAATGCTGGGACAACATTCTCCTTCAGTCTAAAGAAATCAAGCCCCACTTTGCCTGCATGGCTGGGTaGGCAGGTCTGAGGCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: SKCWDNILLQSKEIKPHFACMAG*AGLRLM Trigger: CATAAGCCTCAGACCTGCCAACCCAGCCATGCAGGC...AAAGTGGGGCTTGATTTCTTTAGACTGAAGGAGAATGTTGTCCCAGCATTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | TCTGACAGCCTCTCCGCAGCCCCTCATCTGTTGCCTAACTGTCCTGCCATAGCTTACAGCAATTGTACTTaGTTCAACTCCAGAATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SDSLSAAPHLLPNCPAIAYSNCT*FNSRIP Trigger: AGGAATTCTGGAGTTGAACAAAGTACAATTGCTGTA...AGCTATGGCAGGACAGTTAGGCAACAGATGAGGGGCTGCGGAGAGGCTGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | TTCCAACTACATTCTAGCCCTTGGCACAGAAAATTCTGTGGTAGGACAGAGCCAAAGGACTCTGGGCCTTaGGCAGAAGATTGGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FQLHSSPWHRKFCGRTEPKDSGP*AEDWAS Trigger: AGAAGCCCAATCTTCTGCCAAAGGCCCAGAGTCCTT...TGGCTCTGTCCTACCACAGAATTTTCTGTGCCAAGGGCTAGAATGTAGTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| CDS GCA 90 bp | CAGGATAGTGACAGGAAGCAGGATAGTTTGGTACAGAAGAAGTGGTaGTTGGCAGCTCACAAGTCTGATAGGAGAACTGTAAGGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QDSDRKQDSLVQKKW*LAAHKSDRRTVRRL Trigger: CAACCTCCTTACAGTTCTCCTATCAGACTTGTGAGCTGCCAAGCACCACTTCTTCTGTACCAAACTATCCTGCTTCCTGTCACTATCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | CTAACAGGCTTGGCCGCTGATGAGCGTTCCCAGCTTCTCTCTGCAGCCTTTAAAGCATCCAGCTGTGACTaGTCTATTATTTTTATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTGLAADERSQLLSAAFKASSCD*SIIFIA Trigger: GGCTATAAAAATAATAGACAAGTCACAGCTGGATGC...TTTAAAGGCTGCAGAGAGAAGCTGGGAACGCTCATCAGCGGCCAAGCCTGTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | TCTCGGTCTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACTACAGCAATTGTACTTaGTTCAACTCCAGAATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRSSQGDCPHLLSVSVPNYSNCT*FNSRIP Trigger: AGGAATTCTGGAGTTGAACAAAGTACAATTGCTGTA...GTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAGACCGAGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | CAGCTTCTCTCTGCAGCCTTTAAACTTCTGACAGCCTCTCCGCAGCCCCTCATCTTGTTCATACAGCAATaGTACTTTGTTCAACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLLSAAFKLLTASPQPLILFIQQ*YFVQLQ Trigger: CTGGAGTTGAACAAAGTACAATTGCTGTATGAACAA...GATGAGGGGCTGCGGAGAGGCTGTCAGAAGTTTAAAGGCTGCAGAGAGAAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | CTTCACAAGGCGACTGTCCTCACCTCCTCTCTGTGTCAGTGCCTAACAGGCTTGTTGTTCATACAGCAATaGTACTTTGTTCAACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHKATVLTSSLCQCLTGLLFIQQ*YFVQLQ Trigger: CTGGAGTTGAACAAAGTACAATTGCTGTATGAACAA...CAAGCCTGTTAGGCACTGACACAGAGAGGAGGTGAGGACAGTCGCCTTGTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS TCA 90 bp | CTCTGTACAGGAACCTCTATGAGCATCCACTTGTGCTCCTTGATTTaGGCTATGCTTAGCCGTTTGGAAGGATCTAGGACCAACATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LCTGTSMSIHLCSLI*AMLSRLEGSRTNIL Trigger: AAGGATGTTGGTCCTAGATCCTTCCAAACGGCTAAGCATAGCTCAAATCAAGGAGCACAAGTGGATGCTCATAGAGGTTCCTGTACAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 90 bp | CTGCTCATTAAATTCTCCAATGGACGGCTCGTTTTCCTGTTCTTGTaGGTAGAGAATAGGCCTCTGTACAGGAACCTCTATGAGCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLIKFSNGRLVFLFL*VENRPLYRNLYEHP Trigger: TGGATGCTCATAGAGGTTCCTGTACAGAGGCCTATTCTCTACCCACAAGAACAGGAAAACGAGCCGTCCATTGGAGAATTTAATGAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGAAGGACTCTGGGCCTTaGGCAGAAGATTGGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ESLSLLSVTLVLVRRKGLKDSGP*AEDWAS Trigger: AGAAGCCCAATCTTCTGCCAAAGGCCCAGAGTCCTT...CAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | TTCCAACTACATTCTAGCCCTTGGCACAGAAAATTCTGTGGTAGGACAGAGCCACTGCATCTCTGGGTATaGGCTGAGGAAAGAGCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: FQLHSSPWHRKFCGRTEPLHLWV*AEERAK Trigger: TTTAGCTCTTTCCTCAGCCAATACCCAGAGATGCAG...TGGCTCTGTCCTACCACAGAATTTTCTGTGCCAAGGGCTAGAATGTAGTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | CTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTAGAACTGTAAGGAGGTaGGAGCAGCTCCTGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLLSVTLVLVRRKGLEARTVRR*EQLLAA Trigger: AGCAGCCAGGAGCTGCTCCAACCTCCTTACAGTTCT...AGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAAGAACTGTAAGGAGGTaGGAGCAGCTCCTGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSLLSVTLVLVRRKGLERTVRR*EQLLAA Trigger: AGCAGCCAGGAGCTGCTCCAACCTCCTTACAGTTCT...TTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | GAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGCAGAAGAAGTGGTGCTaGGCAGCTCACAAGTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ESLSLLSVTLVLVRRKGLQKKWC*AAHKSD Trigger: ATCAGACTTGTGAGCTGCCAAGCACCACTTCTTCTG...CAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | CCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAAGCCACTCCATTGTGTaGTGGATCCACAGCTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: PRESLSLLSVTLVLVRRKSHSIV*WIHSFY Trigger: GTAGAAGCTGTGGATCCACAACACAATGGAGTGGCT...TTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 |
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| CDS-3UTR CAA 90 bp | CTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTGCTATGCTTAGCCGTTaGGAAGGATCTAGGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LSLLSVTLVLVRRKGLEAAMLSR*EGSRTN Trigger: GTTGGTCCTAGATCCTTCCAAACGGCTAAGCATAGC...AGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | CCACGAGAGAGCCTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGAGGAAAGAGCTAAATaGCATCTGCTCAGAAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PRESLSLLSVTLVLVRRKEERAK*HLLRRG Trigger: CCCTCTTCTGAGCAGATGCAATTTAGCTCTTTCCTC...TTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAGGCTCTCTCGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS TCA 90 bp | CTGTACTTCTCGGTAGATTTTCTCAAGGTTTACTGCATCCAGCTGTaGCTTGTCTATTATTTTTATAGCCACCTCCGTCTTGGTGATCCG | + |
|
Preference number: 5 (lower is better) Translates to: LYFSVDFLKVYCIQL*LVYYFYSHLRLGDP Trigger: CGGATCACCAAGACGGAGGTGGCTATAAAAATAATAGACAAGTCACAGCTGGATGCAGTAAACCTTGAGAAAATCTACCGAGAAGTACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | CTATACAGTAGTGTACACACTGCTGATGTGAACCGACAGGCAGACACGTCAGTATTGTTCATACAGCAATaGTACTTTGTTCAACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LYSSVHTADVNRQADTSVLFIQQ*YFVQLQ Trigger: CTGGAGTTGAACAAAGTACAATTGCTGTATGAACAA...TACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTGTGTACACTACTGTATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | TTGCACTTTTTGCCGAATGGAAATTTTACCTCATGTTTGGATCACCAGTCTCTTCAGAAGAAGTGGTGCTaGGCAGCTCACAAGTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LHFLPNGNFTSCLDHQSLQKKWC*AAHKSD Trigger: ATCAGACTTGTGAGCTGCCAAGCACCACTTCTTCTG...AAGAGACTGGTGATCCAAACATGAGGTAAAATTTCCATTCGGCAAAAAGTGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS-3UTR CAA 90 bp | CTAAGCCTTCTTAGTGTTACTTTAGTACTTGTGAGGAGAAAAGGCTTGGAAGCTTTGTTCATACAGCAATaGTACTTTGTTCAACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSLLSVTLVLVRRKGLEALFIQQ*YFVQLQ Trigger: CTGGAGTTGAACAAAGTACAATTGCTGTATGAACAA...AGCTTCCAAGCCTTTTCTCCTCACAAGTACTAAAGTAACACTAAGAAGGCTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS TCA 90 bp | TGTACTTTGTTCAACTCCAGAATTCCTTTGGTTCTAGCAAGATTCTaGAGATGTTGTCTAAATGCTACAATTCCTTGTGTAAGGGACGTA | + |
|
Preference number: 5 (lower is better) Translates to: CTLFNSRIPLVLARF*RCCLNATIPCVRDV Trigger: TACGTCCCTTACACAAGGAATTGTAGCATTTAGACAACATCTTCAGAATCTTGCTAGAACCAAAGGAATTCTGGAGTTGAACAAAGTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CAA 72 bp | GCTCTGCGGCCTTCTCGGAAGCTCACGGGGGACCGGTaGTGGGCCTCACGCTTCTGTGAGCTCAGAGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ALRPSRKLTGDR*WASRFCELRAC Trigger: GCAGGCTCTGAGCTCACAGAAGCGTGAGGCCCACAACCGGTCCCCCGTGAGCTTCCGAGAAGGCCGCAGAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS TCA 72 bp | GCTCACGGGGGACCGGTTGTGGGCCTCACGCTTCTGTaGGCTCAGAGCCTGCATGGCTGGGTTGGCAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AHGGPVVGLTLL*AQSLHGWVGRS Trigger: AGACCTGCCAACCCAGCCATGCAGGCTCTGAGCTCACAGAAGCGTGAGGCCCACAACCGGTCCCCCGTGAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | CTGCGGCCTTCTCGGAAGCTCACGGGGGACCGGTTGTaGGCCTCACGCTTCTGTGAGCTCAGAGCCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LRPSRKLTGDRL*ASRFCELRACM Trigger: CATGCAGGCTCTGAGCTCACAGAAGCGTGAGGCCCACAACCGGTCCCCCGTGAGCTTCCGAGAAGGCCGCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CAA 90 bp | GTATCTGATGCTCTGCGGCCTTCTCGGAAGCTCACGGGGGACCGGTaGTGGGCCTCACGCTTCTGTGAGCTCAGAGCCTGCATGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VSDALRPSRKLTGDR*WASRFCELRACMAG Trigger: CCCAGCCATGCAGGCTCTGAGCTCACAGAAGCGTGAGGCCCACAACCGGTCCCCCGTGAGCTTCCGAGAAGGCCGCAGAGCATCAGATAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS GCA 72 bp | GGACTCAGGGCCTGGGTCAGGCTGAATGATGGGGGCTaGTGGGATGTCAGTGGAGTCTCCTGGTGGGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GLRAWVRLNDGG*WDVSGVSWWGR Trigger: TCTTCCCCACCAGGAGACTCCACTGACATCCCAGCAGCCCCCATCATTCAGCCTGACCCAGGCCCTGAGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | TGCTCAGAAGAGGGCTCGAGGACAGGACTCAGGGCCTaGGTCAGGCTGAATGATGGGGGCTGCTGGGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: CSEEGSRTGLRA*VRLNDGGCWDV Trigger: GACATCCCAGCAGCCCCCATCATTCAGCCTGACCCAGGCCCTGAGTCCTGTCCTCGAGCCCTCTTCTGAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS TCA 72 bp | TGTGGTGGAGGGGGTGGTGGTGGGGGTGGTGGCTGCTaGTGTTGCTGCAATTGTGAGGGTAAGGGAGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CGGGGGGGGGGC*CCCNCEGKGGG Trigger: TCCACCTCCCTTACCCTCACAATTGCAGCAACATCAGCAGCCACCACCCCCACCACCACCCCCTCCACCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS TCA 72 bp | CCTGAAGTCCTGAGCTCCTGGGACAGTCCGCCCCTGTaGGGTTGCTCTGCTGGGCTCCATCCACAGGATAGT | + |
|
Preference number: 6 (lower is better) Translates to: PEVLSSWDSPPL*GCSAGLHPQDS Trigger: ACTATCCTGTGGATGGAGCCCAGCAGAGCAACCTCACAGGGGCGGACTGTCCCAGGAGCTCAGGACTTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS TCA 72 bp | TGCCCCGGGCATCACAACCAATTGGTTAGTCACTTCTaGCAGAGTGTGCCGTCGCTGCCCACTGCGTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: CPGHHNQLVSHF*QSVPSLPTACG Trigger: GCCACACGCAGTGGGCAGCGACGGCACACTCTGTCAGAAGTGACTAACCAATTGGTTGTGATGCCCGGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | TCAATGGAGGTCTCCATCATACTGCTGGGCAGTGACTaGCATCCCTTCCTCACCAGGACAGGGGGCACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SMEVSIILLGSD*HPFLTRTGGTG Trigger: CCCTGTGCCCCCTGTCCTGGTGAGGAAGGGATGCCAGTCACTGCCCAGCAGTATGATGGAGACCTCCATTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | CTTCTGACAGAGTGTGCCGTCGCTGCCCACTGCGTGTaGCCTGGAAAGCTTCAAAGGCCTGACTGGGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLTECAVAAHCV*PGKLQRPDWGL Trigger: AAGACCCCAGTCAGGCCTTTGAAGCTTTCCAGGCCACACGCAGTGGGCAGCGACGGCACACTCTGTCAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | CCAAGCTTTGCTGTGGTGAGAGCTGAGGGTGCATGCTaGCAGACAGGCTGGAGACACTTTCCTGCTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PSFAVVRAEGAC*QTGWRHFPAAG Trigger: CCCAGCAGCAGGAAAGTGTCTCCAGCCTGTCTGCCAGCATGCACCCTCAGCTCTCACCACAGCAAAGCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS GCA 72 bp | TGCTTCTGGAGGAAGAGTCGCTTCTGTTGGAGCCTATaGTCCTGTAGCTGCTGTTCCAGGCTCCGAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: CFWRKSRFCWSL*SCSCCSRLRGG Trigger: GCCACCTCGGAGCCTGGAACAGCAGCTACAGGAGCATAGGCTCCAACAGAAGCGACTCTTCCTCCAGAAGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | TGGGAGGAGGGTAGATCGCATCAGTCTCACGTTCGGTaGATGCAAGGTCACTGGCAGCCCCACAGTTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: WEEGRSHQSHVR*MQGHWQPHSLC Trigger: GCACAAACTGTGGGGCTGCCAGTGACCTTGCATCCACCGAACGTGAGACTGATGCGATCTACCCTCCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | GTGGTGAGAGCTGAGGGTGCATGCTGGCAGACAGGCTaGAGACACTTTCCTGCTGCTGGGAGATTTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VVRAEGACWQTG*RHFPAAGRFPP Trigger: AGGAGGAAATCTCCCAGCAGCAGGAAAGTGTCTCCAGCCTGTCTGCCAGCATGCACCCTCAGCTCTCACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | TGGAGTCTCCTGGTGGGGAAGAGCCAGCTGCTGACTTaGTCCAGGGTAGGAGCTCTCTGCTATCTGCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: WSLLVGKSQLLT*SRVGALCYLHL Trigger: CAGATGCAGATAGCAGAGAGCTCCTACCCTGGACCAAGTCAGCAGCTGGCTCTTCCCCACCAGGAGACTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CAA 90 bp | GGGGCCGGGAGTAGAGGGCAGTGGCTGCAACTGCATCTCTGGGTATaGGCTGAGGAAAGAGCTAAATTGCATCTGCTCAGAAGAGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GAGSRGQWLQLHLWV*AEERAKLHLLRRGL Trigger: GAGCCCTCTTCTGAGCAGATGCAATTTAGCTCTTTCCTCAGCCAATACCCAGAGATGCAGTTGCAGCCACTGCCCTCTACTCCCGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS GCA 72 bp | AGGAGGGTAGATCGCATCAGTCTCACGTTCGGTGGATaGAAGGTCACTGGCAGCCCCACAGTTTGTGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RRVDRISLTFGG*KVTGSPTVCAL Trigger: CAAGGCACAAACTGTGGGGCTGCCAGTGACCTTGCATCCACCGAACGTGAGACTGATGCGATCTACCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS GCA 72 bp | AATTGGTTAGTCACTTCTGACAGAGTGTGCCGTCGCTaGCCACTGCGTGTGGCCTGGAAAGCTTCAAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: NWLVTSDRVCRR*PLRVAWKASKA Trigger: GGCCTTTGAAGCTTTCCAGGCCACACGCAGTGGGCAGCGACGGCACACTCTGTCAGAAGTGACTAACCAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | GCAACTGTTTGTTCAGCAATGGTGCTAGGCCGACGCTaGCGGCCATCAAGTCTCTGCTCCACAGGAAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: ATVCSAMVLGRR*RPSSLCSTGKL Trigger: CAGTTTTCCTGTGGAGCAGAGACTTGATGGCCGCCAGCGTCGGCCTAGCACCATTGCTGAACAAACAGTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | TCGCATCAGTCTCACGTTCGGTGGATGCAAGGTCACTaGCAGCCCCACAGTTTGTGCCTTGGCAACTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SHQSHVRWMQGH*QPHSLCLGNCL Trigger: CAAACAGTTGCCAAGGCACAAACTGTGGGGCTGCCAGTGACCTTGCATCCACCGAACGTGAGACTGATGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | CCAAGCCTTCATCAATGGAGGTCTCCATCATACTGCTaGGCAGTGACTGGCATCCCTTCCTCACCAGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: PSLHQWRSPSYC*AVTGIPSSPGQ Trigger: CTGTCCTGGTGAGGAAGGGATGCCAGTCACTGCCCAGCAGTATGATGGAGACCTCCATTGATGAAGGCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CAA 90 bp | TGGCTGCAACTGCATCTCTGGGTATTGGCTGAGGAAAGAGCTAAATaGCATCTGCTCAGAAGAGGGCTCGAGGACAGGACTCAGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: WLQLHLWVLAEERAK*HLLRRGLEDRTQGL Trigger: CAGGCCCTGAGTCCTGTCCTCGAGCCCTCTTCTGAGCAGATGCAATTTAGCTCTTTCCTCAGCCAATACCCAGAGATGCAGTTGCAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS GCA 72 bp | TCTCCAAGCCTTCATCAATGGAGGTCTCCATCATACTaGTGGGCAGTGACTGGCATCCCTTCCTCACCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPSLHQWRSPSY*WAVTGIPSSPG Trigger: TCCTGGTGAGGAAGGGATGCCAGTCACTGCCCAGCAGTATGATGGAGACCTCCATTGATGAAGGCTTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS GCA 72 bp | ATCACAACCAATTGGTTAGTCACTTCTGACAGAGTGTaGCGTCGCTGCCCACTGCGTGTGGCCTGGAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ITTNWLVTSDRV*RRCPLRVAWKA Trigger: AGCTTTCCAGGCCACACGCAGTGGGCAGCGACGGCACACTCTGTCAGAAGTGACTAACCAATTGGTTGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | GCCGGGAGTAGAGGGCAGTGGCTGCAACTGCATCTCTaGGTATTGGCTGAGGAAAGAGCTAAATTGCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGSRGQWLQLHL*VLAEERAKLHL Trigger: CAGATGCAATTTAGCTCTTTCCTCAGCCAATACCCAGAGATGCAGTTGCAGCCACTGCCCTCTACTCCCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS GCA 72 bp | AAGAGTCGCTTCTGTTGGAGCCTATGCTCCTGTAGCTaGTGTTCCAGGCTCCGAGGTGGCTCTTTACAATAC | + |
|
Preference number: 6 (lower is better) Translates to: KSRFCWSLCSCS*CSRLRGGSLQY Trigger: GTATTGTAAAGAGCCACCTCGGAGCCTGGAACAGCAGCTACAGGAGCATAGGCTCCAACAGAAGCGACTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | AAGGAAGGGCTGTCTTCCAGAAAGTTCAGGTCCCTCTaGGCAGACCCCATATCATACTCAGAGTCCACACTC | + |
|
Preference number: 6 (lower is better) Translates to: KEGLSSRKFRSL*ADPISYSESTL Trigger: GAGTGTGGACTCTGAGTATGATATGGGGTCTGCCCAGAGGGACCTGAACTTTCTGGAAGACAGCCCTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | CGAGGTGGCTCTTTACAATACACTGGACAAGGACTCTaGGCCTTTGGCAGAAGATTGGGCTTCTGGAGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: RGGSLQYTGQGL*AFGRRLGFWSR Trigger: TCGACTCCAGAAGCCCAATCTTCTGCCAAAGGCCCAGAGTCCTTGTCCAGTGTATTGTAAAGAGCCACCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CAA 90 bp | TCTGCTGGGCTCCATCCACAGGATAGTGACAGGAAGCAGGATAGTTaGGTACAGAAGAAGTGGTGCTTGGCAGCTCACAAGTCTGATAGG | + |
|
Preference number: 6 (lower is better) Translates to: SAGLHPQDSDRKQDS*VQKKWCLAAHKSDR Trigger: CCTATCAGACTTGTGAGCTGCCAAGCACCACTTCTTCTGTACCAAACTATCCTGCTTCCTGTCACTATCCTGTGGATGGAGCCCAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS TCA 72 bp | AGGCTTATGAAAGGAGATGTCATGCGGGGTGACGGCTaGTTGGCTAACATGATGTCCTTCAAGGAAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RLMKGDVMRGDG*LANMMSFKEGL Trigger: CAGCCCTTCCTTGAAGGACATCATGTTAGCCAATCAGCCGTCACCCCGCATGACATCTCCTTTCATAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS TCA 72 bp | TCTAAATGCTACAATTCCTTGTGTAAGGGACGTATCTaGTGCTCTGCGGCCTTCTCGGAAGCTCACGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SKCYNSLCKGRI*CSAAFSEAHGG Trigger: TCCCCCGTGAGCTTCCGAGAAGGCCGCAGAGCATCAGATACGTCCCTTACACAAGGAATTGTAGCATTTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS GCA 72 bp | TGCATCTCTGGGTATTGGCTGAGGAAAGAGCTAAATTaGATCTGCTCAGAAGAGGGCTCGAGGACAGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: CISGYWLRKELN*ICSEEGSRTGL Trigger: GAGTCCTGTCCTCGAGCCCTCTTCTGAGCAGATGCAATTTAGCTCTTTCCTCAGCCAATACCCAGAGATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CAA 72 bp | CTGCATCTCTGGGTATTGGCTGAGGAAAGAGCTAAATaGCATCTGCTCAGAAGAGGGCTCGAGGACAGGACT | + |
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Preference number: 6 (lower is better) Translates to: LHLWVLAEERAK*HLLRRGLEDRT Trigger: AGTCCTGTCCTCGAGCCCTCTTCTGAGCAGATGCAATTTAGCTCTTTCCTCAGCCAATACCCAGAGATGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS GCA 72 bp | GCTGGCGGCCATCAAGTCTCTGCTCCACAGGAAAACTaGTCCTATGTGATTTTAGACGTTCCACCAACAAGA | + |
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Preference number: 6 (lower is better) Translates to: AGGHQVSAPQEN*SYVILDVPPTR Trigger: TCTTGTTGGTGGAACGTCTAAAATCACATAGGAGCAGTTTTCCTGTGGAGCAGAGACTTGATGGCCGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | GTAGAGGGCAGTGGCTGCAACTGCATCTCTGGGTATTaGCTGAGGAAAGAGCTAAATTGCATCTGCTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: VEGSGCNCISGY*LRKELNCICSE Trigger: TTCTGAGCAGATGCAATTTAGCTCTTTCCTCAGCCAATACCCAGAGATGCAGTTGCAGCCACTGCCCTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CAA 72 bp | AGTAGAGGGCAGTGGCTGCAACTGCATCTCTGGGTATaGGCTGAGGAAAGAGCTAAATTGCATCTGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: SRGQWLQLHLWV*AEERAKLHLLR Trigger: TCTGAGCAGATGCAATTTAGCTCTTTCCTCAGCCAATACCCAGAGATGCAGTTGCAGCCACTGCCCTCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CAA 72 bp | CTCCATCCACAGGATAGTGACAGGAAGCAGGATAGTTaGGTACAGAAGAAGTGGTGCTTGGCAGCTCACAAG | + |
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Preference number: 6 (lower is better) Translates to: LHPQDSDRKQDS*VQKKWCLAAHK Trigger: CTTGTGAGCTGCCAAGCACCACTTCTTCTGTACCAAACTATCCTGCTTCCTGTCACTATCCTGTGGATGGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CAA 90 bp | TCCAGGGTAGGAGCTCTCTGCTATCTGCATCTGATTAAAATATGCTaGCAGCTGAGACTGCTTCTGGAGGAAGAGTCGCTTCTGTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SRVGALCYLHLIKIC*QLRLLLEEESLLLE Trigger: CTCCAACAGAAGCGACTCTTCCTCCAGAAGCAGTCTCAGCTGCAAGCATATTTTAATCAGATGCAGATAGCAGAGAGCTCCTACCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS TCA 72 bp | GGAACCTCTATGAGCATCCACTTGTGCTCCTTGATTTaGGCTATGCTTAGCCGTTTGGAAGGATCTAGGACC | + |
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Preference number: 6 (lower is better) Translates to: GTSMSIHLCSLI*AMLSRLEGSRT Trigger: GGTCCTAGATCCTTCCAAACGGCTAAGCATAGCTCAAATCAAGGAGCACAAGTGGATGCTCATAGAGGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | TCCATCCACAGGATAGTGACAGGAAGCAGGATAGTTTaGTACAGAAGAAGTGGTGCTTGGCAGCTCACAAGT | + |
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Preference number: 6 (lower is better) Translates to: SIHRIVTGSRIV*YRRSGAWQLTS Trigger: ACTTGTGAGCTGCCAAGCACCACTTCTTCTGTACCAAACTATCCTGCTTCCTGTCACTATCCTGTGGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CAA 90 bp | GATAGTGACAGGAAGCAGGATAGTTTGGTACAGAAGAAGTGGTGCTaGGCAGCTCACAAGTCTGATAGGAGAACTGTAAGGAGGTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: DSDRKQDSLVQKKWC*AAHKSDRRTVRRLE Trigger: CTCCAACCTCCTTACAGTTCTCCTATCAGACTTGTGAGCTGCCAAGCACCACTTCTTCTGTACCAAACTATCCTGCTTCCTGTCACTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | AGTGACAGGAAGCAGGATAGTTTGGTACAGAAGAAGTaGTGCTTGGCAGCTCACAAGTCTGATAGGAGAACT | + |
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Preference number: 6 (lower is better) Translates to: SDRKQDSLVQKK*CLAAHKSDRRT Trigger: AGTTCTCCTATCAGACTTGTGAGCTGCCAAGCACCACTTCTTCTGTACCAAACTATCCTGCTTCCTGTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CAA 72 bp | GGAGCTCTCTGCTATCTGCATCTGATTAAAATATGCTaGCAGCTGAGACTGCTTCTGGAGGAAGAGTCGCTT | + |
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Preference number: 6 (lower is better) Translates to: GALCYLHLIKIC*QLRLLLEEESL Trigger: AAGCGACTCTTCCTCCAGAAGCAGTCTCAGCTGCAAGCATATTTTAATCAGATGCAGATAGCAGAGAGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CAA 72 bp | AGGAAGCAGGATAGTTTGGTACAGAAGAAGTGGTGCTaGGCAGCTCACAAGTCTGATAGGAGAACTGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: RKQDSLVQKKWC*AAHKSDRRTVR Trigger: CCTTACAGTTCTCCTATCAGACTTGTGAGCTGCCAAGCACCACTTCTTCTGTACCAAACTATCCTGCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CAA 90 bp | AACCTGCTCATTAAATTCTCCAATGGACGGCTCGTTTTCCTGTTCTaGTGGGTAGAGAATAGGCCTCTGTACAGGAACCTCTATGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: NLLIKFSNGRLVFLF*WVENRPLYRNLYEH Trigger: ATGCTCATAGAGGTTCCTGTACAGAGGCCTATTCTCTACCCACAAGAACAGGAAAACGAGCCGTCCATTGGAGAATTTAATGAGCAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CCA 72 bp | TCATCTGCTGATTGGACAAGCCACTCCATTGTGTTGTaGATCCACAGCTTCTACCATTTCACAATCAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SSADWTSHSIVL*IHSFYHFTIKE Trigger: CTCTTTGATTGTGAAATGGTAGAAGCTGTGGATCCACAACACAATGGAGTGGCTTGTCCAATCAGCAGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000176491.8 ENSMUST00000176663.8 |
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| CDS CAA 72 bp | CAGAATTCCTTTGGTTCTAGCAAGATTCTGAAGATGTaGTCTAAATGCTACAATTCCTTGTGTAAGGGACGT | + |
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Preference number: 6 (lower is better) Translates to: QNSFGSSKILKM*SKCYNSLCKGR Trigger: ACGTCCCTTACACAAGGAATTGTAGCATTTAGACAACATCTTCAGAATCTTGCTAGAACCAAAGGAATTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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| CDS CAA 72 bp | GCGTTTGATCCCATTTGTTCATACAGCAATTGTACTTaGTTCAACTCCAGAATTCCTTTGGTTCTAGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: AFDPICSYSNCT*FNSRIPLVLAR Trigger: TCTTGCTAGAACCAAAGGAATTCTGGAGTTGAACAAAGTACAATTGCTGTATGAACAAATGGGATCAAACGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041375.11 ENSMUST00000176491.8 ENSMUST00000176663.8 ENSMUST00000176824.8 |
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